Clc07G06745 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G06745
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Photosystem I P700 chlorophyll a apoprotein A1
Location	ClcChr07: 14258849 .. 14259545 (+)
RNA-Seq Expression	Clc07G06745
Synteny	Clc07G06745

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACTCTGCCACTCAACCCACACACCCTGCCATCCACCCACGCCCACAGTGTGCACTCCATGCCCATTTATCGTCAATGCTGCATGCCTACGACCATTTTGGGTGTTTGTCAAATTGAGGTTGAAGAAGCCTATAACCCTAAGAGTGCAAGCTCGAACTCTAGTGAAAGATATCCGGAGCTTAGCCTACACAAGCCTCGTTTGTCTCAGTTTTAAGACTTCAGCATACTCATTCTCTCTATATTTCTTGGCTAGGCGATCCTGCTCACATTGGCCCTAATGCCCAGGTGGTTTGGCCAATAGTGGGCCAAGATATATTGAATGGTGATGTAGGCAGAGGTTTTCGAGGAATACAAATAACCTCTGAGTTTTTTTCAGCTGTGGCGAGCATTTGGAATAACTAGTGAATTACAACTCTACTGTACCGTAATTGGTGCATTAGTCTTCGCAGCCTTAATGCTTTTTGCCGGTTTCTTTCATTATCACAAGGCTTCTCCAAAATTGGCTTGGTTCCAAGATGTAGAATCCATGTTGAATCACCATTTAGCGGGTCTGCTAGGACTTGGGTCTCTTTCTTGGGCGGGACATCAAGTACACGTATCTTTACTGACTAATCAATTTCTAAATGTTGGAGTAGATCCTAAAGAGATTCCACTTCCTCATGAATTTTTCTTGAATCGGGATCAACTTGTGTGA

mRNA sequence

ATGCACTCTGCCACTCAACCCACACACCCTGCCATCCACCCACGCCCACAGTGCGATCCTGCTCACATTGGCCCTAATGCCCAGCTGTGGCGAGCATTTGGAATAACTAGTGAATTACAACTCTACTGTACCGTAATTGGTGCATTAGTCTTCGCAGCCTTAATGCTTTTTGCCGGTTTCTTTCATTATCACAAGGCTTCTCCAAAATTGGCTTGGTTCCAAGATGTAGAATCCATGTTGAATCACCATTTAGCGGGTCTGCTAGGACTTGGGTCTCTTTCTTGGGCGGGACATCAAGTACACGTATCTTTACTGACTAATCAATTTCTAAATGTTGGAGTAGATCCTAAAGAGATTCCACTTCCTCATGAATTTTTCTTGAATCGGGATCAACTTGTGTGA

Coding sequence (CDS)

ATGCACTCTGCCACTCAACCCACACACCCTGCCATCCACCCACGCCCACAGTGCGATCCTGCTCACATTGGCCCTAATGCCCAGCTGTGGCGAGCATTTGGAATAACTAGTGAATTACAACTCTACTGTACCGTAATTGGTGCATTAGTCTTCGCAGCCTTAATGCTTTTTGCCGGTTTCTTTCATTATCACAAGGCTTCTCCAAAATTGGCTTGGTTCCAAGATGTAGAATCCATGTTGAATCACCATTTAGCGGGTCTGCTAGGACTTGGGTCTCTTTCTTGGGCGGGACATCAAGTACACGTATCTTTACTGACTAATCAATTTCTAAATGTTGGAGTAGATCCTAAAGAGATTCCACTTCCTCATGAATTTTTCTTGAATCGGGATCAACTTGTGTGA

Protein sequence

MHSATQPTHPAIHPRPQCDPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKEIPLPHEFFLNRDQLV

Homology

[Close]

BLAST of Clc07G06745 vs. NCBI nr
Match: TKS04886.1 (Photosystem I P700 chlorophyll a apoprotein A1 [Populus alba])

HSP 1 Score: 218.4 bits (555), Expect = 3.7e-53
Identity = 103/114 (90.35%), Postives = 106/114 (92.98%), Query Frame = 0


Query: 19  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVES 78
           DP HIGP+AQLWRA GITSELQLYCT IGALVFAALMLFAG+FHYHKA+PKLAWFQDVES
Sbjct: 104 DPTHIGPSAQLWRASGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVES 163

Query: 79  MLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKEIPLPHEFFLNRDQL 133
           MLNHHLAGLLGLGSLSWAGHQVHVSL  NQFLN GVDPKEIPLPHEF LNRD L
Sbjct: 164 MLNHHLAGLLGLGSLSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLL 217

[Close]

BLAST of Clc07G06745 vs. NCBI nr
Match: PHT36605.1 (Photosystem I chlorophyll a apoprotein A1 [Capsicum baccatum])

HSP 1 Score: 217.6 bits (553), Expect = 6.4e-53
Identity = 102/114 (89.47%), Postives = 106/114 (92.98%), Query Frame = 0


Query: 19  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVES 78
           DP HIGP+AQ+WRA GITSELQLYCT IGALVFAALMLFAG+FHYHKA+PKLAWFQDVES
Sbjct: 104 DPTHIGPSAQIWRASGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVES 163

Query: 79  MLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKEIPLPHEFFLNRDQL 133
           MLNHHLAGLLGLGSLSWAGHQVHVSL  NQFLN GVDPKEIPLPHEF LNRD L
Sbjct: 164 MLNHHLAGLLGLGSLSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLL 217

[Close]

BLAST of Clc07G06745 vs. NCBI nr
Match: KAG9438620.1 (hypothetical protein H6P81_021443 [Aristolochia fimbriata])

HSP 1 Score: 215.7 bits (548), Expect = 2.4e-52
Identity = 101/114 (88.60%), Postives = 106/114 (92.98%), Query Frame = 0


Query: 19  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVES 78
           DP HIGP+AQ+WRA GITSELQLYCT IGALVFAALMLFAG+FHYHKA+PKLAWFQDVES
Sbjct: 206 DPTHIGPSAQIWRASGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVES 265

Query: 79  MLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKEIPLPHEFFLNRDQL 133
           MLNHHLAGLLGLGSLSWAGHQVHVSL  NQFL+ GVDPKEIPLPHEF LNRD L
Sbjct: 266 MLNHHLAGLLGLGSLSWAGHQVHVSLPINQFLDAGVDPKEIPLPHEFILNRDLL 319

[Close]

BLAST of Clc07G06745 vs. NCBI nr
Match: RWW34472.1 (hypothetical protein GW17_00000749 [Ensete ventricosum])

HSP 1 Score: 212.6 bits (540), Expect = 2.0e-51
Identity = 99/114 (86.84%), Postives = 105/114 (92.11%), Query Frame = 0


Query: 19  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVES 78
           DP HI P+AQLWRA GITSELQLYCT IGALVFA+LMLFAG+FHYHKA+PKLAWFQDVES
Sbjct: 104 DPTHIAPSAQLWRASGITSELQLYCTAIGALVFASLMLFAGWFHYHKAAPKLAWFQDVES 163

Query: 79  MLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKEIPLPHEFFLNRDQL 133
           MLNHHLAGLLGLGSLSWAGHQ+HVSL  NQFL+ GVDPKEIPLPHEF LNRD L
Sbjct: 164 MLNHHLAGLLGLGSLSWAGHQIHVSLPINQFLDAGVDPKEIPLPHEFILNRDLL 217

[Close]

BLAST of Clc07G06745 vs. NCBI nr
Match: PHT34484.1 (Photosystem I chlorophyll a apoprotein A1 [Capsicum baccatum])

HSP 1 Score: 211.8 bits (538), Expect = 3.5e-51
Identity = 100/114 (87.72%), Postives = 105/114 (92.11%), Query Frame = 0


Query: 19  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVES 78
           DP HIGP++Q+WRA GITSELQLYCT IGALVFAALMLFAG+FHYHKA+PKLAWFQDVES
Sbjct: 120 DPTHIGPSSQIWRASGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVES 179

Query: 79  MLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKEIPLPHEFFLNRDQL 133
           MLNHHLAGLLGLGSLSWAGHQVHVSLL  QFLN GVD KEIPLPHEF LNRD L
Sbjct: 180 MLNHHLAGLLGLGSLSWAGHQVHVSLLIIQFLNAGVDLKEIPLPHEFILNRDLL 233

[Close]

BLAST of Clc07G06745 vs. ExPASy Swiss-Prot
Match: Q9MTN8 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Oenothera elata subsp. hookeri OX=85636 GN=psaA PE=3 SV=2)

HSP 1 Score: 202.6 bits (514), Expect = 2.8e-51
Identity = 103/144 (71.53%), Postives = 106/144 (73.61%), Query Frame = 0


Query: 19  DPAHIGPNA------------------------------QLWRAFGITSELQLYCTVIGA 78
           DP HIGP+A                              QLWRA GITSELQLYCT IGA
Sbjct: 104 DPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQLWRASGITSELQLYCTAIGA 163

Query: 79  LVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQ 133
           LVFAALMLFAG+FHYHKA+PKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSL  NQ
Sbjct: 164 LVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQ 223

[Close]

BLAST of Clc07G06745 vs. ExPASy Swiss-Prot
Match: Q14FF7 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Populus alba OX=43335 GN=psaA PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 2.8e-51
Identity = 103/144 (71.53%), Postives = 106/144 (73.61%), Query Frame = 0


Query: 19  DPAHIGPNA------------------------------QLWRAFGITSELQLYCTVIGA 78
           DP HIGP+A                              QLWRA GITSELQLYCT IGA
Sbjct: 104 DPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQLWRASGITSELQLYCTAIGA 163

Query: 79  LVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQ 133
           LVFAALMLFAG+FHYHKA+PKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSL  NQ
Sbjct: 164 LVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQ 223

[Close]

BLAST of Clc07G06745 vs. ExPASy Swiss-Prot
Match: Q2MII7 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Solanum bulbocastanum OX=147425 GN=psaA PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 2.8e-51
Identity = 103/144 (71.53%), Postives = 106/144 (73.61%), Query Frame = 0


Query: 19  DPAHIGPNA------------------------------QLWRAFGITSELQLYCTVIGA 78
           DP HIGP+A                              QLWRA GITSELQLYCT IGA
Sbjct: 104 DPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQLWRASGITSELQLYCTAIGA 163

Query: 79  LVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQ 133
           LVFAALMLFAG+FHYHKA+PKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSL  NQ
Sbjct: 164 LVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQ 223

[Close]

BLAST of Clc07G06745 vs. ExPASy Swiss-Prot
Match: Q2MIA0 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Solanum lycopersicum OX=4081 GN=psaA PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 2.8e-51
Identity = 103/144 (71.53%), Postives = 106/144 (73.61%), Query Frame = 0


Query: 19  DPAHIGPNA------------------------------QLWRAFGITSELQLYCTVIGA 78
           DP HIGP+A                              QLWRA GITSELQLYCT IGA
Sbjct: 104 DPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQLWRASGITSELQLYCTAIGA 163

Query: 79  LVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQ 133
           LVFAALMLFAG+FHYHKA+PKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSL  NQ
Sbjct: 164 LVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQ 223

[Close]

BLAST of Clc07G06745 vs. ExPASy Swiss-Prot
Match: Q27S50 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Solanum tuberosum OX=4113 GN=psaA PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 2.8e-51
Identity = 103/144 (71.53%), Postives = 106/144 (73.61%), Query Frame = 0


Query: 19  DPAHIGPNA------------------------------QLWRAFGITSELQLYCTVIGA 78
           DP HIGP+A                              QLWRA GITSELQLYCT IGA
Sbjct: 104 DPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQLWRASGITSELQLYCTAIGA 163

Query: 79  LVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQ 133
           LVFAALMLFAG+FHYHKA+PKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSL  NQ
Sbjct: 164 LVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQ 223

[Close]

BLAST of Clc07G06745 vs. ExPASy TrEMBL
Match: A0A4V6A9C2 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Populus alba OX=43335 GN=D5086_0000138750 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.8e-53
Identity = 103/114 (90.35%), Postives = 106/114 (92.98%), Query Frame = 0


Query: 19  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVES 78
           DP HIGP+AQLWRA GITSELQLYCT IGALVFAALMLFAG+FHYHKA+PKLAWFQDVES
Sbjct: 104 DPTHIGPSAQLWRASGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVES 163

Query: 79  MLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKEIPLPHEFFLNRDQL 133
           MLNHHLAGLLGLGSLSWAGHQVHVSL  NQFLN GVDPKEIPLPHEF LNRD L
Sbjct: 164 MLNHHLAGLLGLGSLSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLL 217

[Close]

BLAST of Clc07G06745 vs. ExPASy TrEMBL
Match: A0A2G2VUE6 (Photosystem I chlorophyll a apoprotein A1 OS=Capsicum baccatum OX=33114 GN=CQW23_24305 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 3.1e-53
Identity = 102/114 (89.47%), Postives = 106/114 (92.98%), Query Frame = 0


Query: 19  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVES 78
           DP HIGP+AQ+WRA GITSELQLYCT IGALVFAALMLFAG+FHYHKA+PKLAWFQDVES
Sbjct: 104 DPTHIGPSAQIWRASGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVES 163

Query: 79  MLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKEIPLPHEFFLNRDQL 133
           MLNHHLAGLLGLGSLSWAGHQVHVSL  NQFLN GVDPKEIPLPHEF LNRD L
Sbjct: 164 MLNHHLAGLLGLGSLSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLL 217

[Close]

BLAST of Clc07G06745 vs. ExPASy TrEMBL
Match: A0A287RJF9 (Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 9.0e-53
Identity = 101/114 (88.60%), Postives = 106/114 (92.98%), Query Frame = 0


Query: 19  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVES 78
           DP HIGP+AQLWRA GITSELQLYCT IGALVFAALMLFAG+FHYHKA+PKLAWFQDVES
Sbjct: 79  DPTHIGPSAQLWRASGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVES 138

Query: 79  MLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKEIPLPHEFFLNRDQL 133
           MLNHHLAGLLGLGSLSWAGHQ+HVSL  NQFL+ GVDPKEIPLPHEF LNRD L
Sbjct: 139 MLNHHLAGLLGLGSLSWAGHQIHVSLPINQFLDAGVDPKEIPLPHEFILNRDLL 192

[Close]

BLAST of Clc07G06745 vs. ExPASy TrEMBL
Match: A0A287U4Q9 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Hordeum vulgare subsp. vulgare OX=112509 GN=4525132 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 9.0e-53
Identity = 101/114 (88.60%), Postives = 106/114 (92.98%), Query Frame = 0


Query: 19  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVES 78
           DP HIGP+AQLWRA GITSELQLYCT IGALVFAALMLFAG+FHYHKA+PKLAWFQDVES
Sbjct: 79  DPTHIGPSAQLWRASGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVES 138

Query: 79  MLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKEIPLPHEFFLNRDQL 133
           MLNHHLAGLLGLGSLSWAGHQ+HVSL  NQFL+ GVDPKEIPLPHEF LNRD L
Sbjct: 139 MLNHHLAGLLGLGSLSWAGHQIHVSLPINQFLDAGVDPKEIPLPHEFILNRDLL 192

[Close]

BLAST of Clc07G06745 vs. ExPASy TrEMBL
Match: A0A453LI83 (Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.2e-52
Identity = 100/114 (87.72%), Postives = 106/114 (92.98%), Query Frame = 0


Query: 19  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVES 78
           DP HIGP+AQLWRA GITSELQLYCT IGAL+FAALMLFAG+FHYHKA+PKLAWFQDVES
Sbjct: 79  DPTHIGPSAQLWRASGITSELQLYCTAIGALIFAALMLFAGWFHYHKAAPKLAWFQDVES 138

Query: 79  MLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKEIPLPHEFFLNRDQL 133
           MLNHHLAGLLGLGSLSWAGHQ+HVSL  NQFL+ GVDPKEIPLPHEF LNRD L
Sbjct: 139 MLNHHLAGLLGLGSLSWAGHQIHVSLPINQFLDAGVDPKEIPLPHEFILNRDLL 192

[Close]

BLAST of Clc07G06745 vs. TAIR 10
Match: ATCG00350.1 (Photosystem I, PsaA/PsaB protein )

HSP 1 Score: 201.8 bits (512), Expect = 3.4e-52
Identity = 102/144 (70.83%), Postives = 106/144 (73.61%), Query Frame = 0


Query: 19  DPAHIGPNA------------------------------QLWRAFGITSELQLYCTVIGA 78
           DP HIGP+A                              Q+WRA GITSELQLYCT IGA
Sbjct: 104 DPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGA 163

Query: 79  LVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQ 133
           LVFAALMLFAG+FHYHKA+PKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSL  NQ
Sbjct: 164 LVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQ 223

[Close]

BLAST of Clc07G06745 vs. TAIR 10
Match: ATCG00340.1 (Photosystem I, PsaA/PsaB protein )

HSP 1 Score: 75.5 bits (184), Expect = 3.6e-14
Identity = 39/99 (39.39%), Postives = 55/99 (55.56%), Query Frame = 0


Query: 28  QLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYH-KASPKLAWFQDVESMLNHHLAG 87
           Q W   G+ +   LY   +  L  +AL L  G+ H   K  P+++WF++ ES LNHHL+G
Sbjct: 122 QWWYTIGLRTNEDLYTGALFLLFLSALSLIGGWLHLQPKWKPRVSWFKNAESRLNHHLSG 181

Query: 88  LLGLGSLSWAGHQVHVSLLT--------NQFLNVGVDPK 118
           L G+ SL+W GH VHV++          N FLNV   P+
Sbjct: 182 LFGVSSLAWTGHLVHVAIPASRGEYVRWNNFLNVLPHPQ 220

The following BLAST results are available for this feature:

BLAST of Clc07G06745 vs. NCBI nr


Match Name	E-value	Identity	Description
TKS04886.1	3.7e-53	90.35	Photosystem I P700 chlorophyll a apoprotein A1 [Populus alba]	[more]
PHT36605.1	6.4e-53	89.47	Photosystem I chlorophyll a apoprotein A1 [Capsicum baccatum]	[more]
KAG9438620.1	2.4e-52	88.60	hypothetical protein H6P81_021443 [Aristolochia fimbriata]	[more]
RWW34472.1	2.0e-51	86.84	hypothetical protein GW17_00000749 [Ensete ventricosum]	[more]
PHT34484.1	3.5e-51	87.72	Photosystem I chlorophyll a apoprotein A1 [Capsicum baccatum]	[more]

BLAST of Clc07G06745 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MTN8	2.8e-51	71.53	Photosystem I P700 chlorophyll a apoprotein A1 OS=Oenothera elata subsp. hookeri...	[more]
Q14FF7	2.8e-51	71.53	Photosystem I P700 chlorophyll a apoprotein A1 OS=Populus alba OX=43335 GN=psaA ...	[more]
Q2MII7	2.8e-51	71.53	Photosystem I P700 chlorophyll a apoprotein A1 OS=Solanum bulbocastanum OX=14742...	[more]
Q2MIA0	2.8e-51	71.53	Photosystem I P700 chlorophyll a apoprotein A1 OS=Solanum lycopersicum OX=4081 G...	[more]
Q27S50	2.8e-51	71.53	Photosystem I P700 chlorophyll a apoprotein A1 OS=Solanum tuberosum OX=4113 GN=p...	[more]

BLAST of Clc07G06745 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A4V6A9C2	1.8e-53	90.35	Photosystem I P700 chlorophyll a apoprotein A1 OS=Populus alba OX=43335 GN=D5086...	[more]
A0A2G2VUE6	3.1e-53	89.47	Photosystem I chlorophyll a apoprotein A1 OS=Capsicum baccatum OX=33114 GN=CQW23...	[more]
A0A287RJF9	9.0e-53	88.60	Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1	[more]
A0A287U4Q9	9.0e-53	88.60	Photosystem I P700 chlorophyll a apoprotein A1 OS=Hordeum vulgare subsp. vulgare...	[more]
A0A453LI83	1.2e-52	87.72	Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 S...	[more]

BLAST of Clc07G06745 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00350.1	3.4e-52	70.83	Photosystem I, PsaA/PsaB protein	[more]
ATCG00340.1	3.6e-14	39.39	Photosystem I, PsaA/PsaB protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001280	Photosystem I PsaA/PsaB	PRINTS	PR00257	PHOTSYSPSAAB	coord: 80..104 score: 76.39 coord: 41..65 score: 56.2
IPR001280	Photosystem I PsaA/PsaB	PFAM	PF00223	PsaA_PsaB	coord: 28..130 e-value: 4.2E-41 score: 141.0
IPR036408	Photosystem I PsaA/PsaB superfamily	GENE3D	1.20.1130.10	Photosystem I PsaA/PsaB	coord: 25..133 e-value: 5.9E-44 score: 151.9
IPR036408	Photosystem I PsaA/PsaB superfamily	SUPERFAMILY	81558	Photosystem I subunits PsaA/PsaB	coord: 27..128
None	No IPR available	PANTHER	PTHR30128	OUTER MEMBRANE PROTEIN, OMPA-RELATED	coord: 28..132
IPR006243	Photosystem I PsaA	PANTHER	PTHR30128:SF60	PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A1	coord: 28..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G06745.1	Clc07G06745.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
biological_process	GO:0018298	protein-chromophore linkage
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016491	oxidoreductase activity