Clc07G05340 (gene) Watermelon (cordophanus) v2

Overview
NameClc07G05340
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionS-protein homolog
LocationClcChr07: 6925940 .. 6933134 (-)
RNA-Seq ExpressionClc07G05340
SyntenyClc07G05340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCACTTCCTCAAACTGATAGTTCTGCCACAGAACTTTTACTAGCGCTATTTCACGATTGCGTAAGGCCTTTACTTCCCTTGCGAGAATTTGGACAAACTTGTCTTCATAACTCAAATTCTTATTCAATTGCAATGGCTCATAGTCAACTACGTGAGGTGAATCTACTATGTACTGTTGGCTTTTTGGCCCTTAATCTCAAATTAATTAATTTTAATTGAATGATTAATTCGTGTTTTGATGATAACAAACCTGATTTTATTTATTAACCATTTGAGTGTTGTGAAGTGCCTATTGTGTGGAGTTTGGAACAACGGTTTCAATGCAATTTAAATCACTCAAATCGGAGTTCAAACGAAGAAGATATGACCGAAACAAGCTTGGAAAAATCCCGAGCTGATGACGTGACGAATTTTTTTAATCAAAGTGGACAAATTGAAAGGTGTCACTTGGAGCAATGAAGAAATGACAATTGGTGGGTTTTTTTATTTTTGGATTGATGTTAAAAAGAAAATGATTTTAAGAAGAAAATGAATTTAATATTATTATATATGTTTGTGTCTAACGGCTAGTTGCTTTTTAAAAAGATTACTTTAATATTATTACATGTTTGTGTCTAACGACTAGTTGAGTCTAAATCTCCACCATTCAATTTTCTTTTATAAAGATCTAATGGTCCAAATTAATTTGGTTTTCACCCACTTTCATTTCTTTTTAAACACTTCATCTTCTCCAAAATTCTATAACAACTCTTATTATTTTCAATCCTCCATAACTCACCAAGCCACCATTGTTGCTCTCTCTCCAAGCTTCAATTTTCTTCTTTTCATCTTATTCTTGAGAGAGATATATTGTATTGTGAGGATTTATTTGTGAAGTGTTTAAACTTGTAAATCCACTCTATTTAGAGAGTTTGTCAAGTGTGCTCTTTGTTTTTCCAAATTTTTGTATGGGTTGGCTCTTAATCCCAAGAAAAAGAGCTGTTGTAACGGTTTGATCCTTAACCGTGGAAAGGATCGGGTTTGTTCTTGCGCTTGGAAAAAGAACGTTGTAGCGGTTCGACTCTAAGCCGTGGAAAGAGTCAAAGACTTTTAGTGAAGTACCCAAGAGGAACTTGGGAAGTGGACGTAGGTTGGTTTTGCCGAACCACTATAAAATTCACGGTGTCATTTTCTTTATCCCTCTCCTAATTTATTTTTGCAATTAATTTTTGTTAATATATTTTATTGCATGAAATTAATTACAATTTTTAATTCTTGAAATTAATTGCTCATATTGGTTGTTCTTAAATTTCTATATTCATTACCAATCTTTTTATTAGAATTAAACAGAGTGCTTTAAAGTCTGATTGTTAATTTCTTGTTTAATTCAAAGTGAATTTGTTTGCATAAAAAATATTGTTTAAACTACTTATTTGCAAAGAGTTTATTAATTCGCTTAATTGGGCCCACATTAGTAAAAAGTTTAAATTAATTTTAATAAACCCTATTCACCCTTCTCTAGGGTTGCCATACCGATCCTACATATACTTCCCCATCATGGAGACGTGGAAGACATTATGAACTGTAGAGAGTAGCGATGGCACAGCCAAACGATACGCTACAAGGCCAACTCGCTCAATATCTCAAATGGAATGAATCGAGGGCTCAACTAACCCTTCCTTCCAAACCTTAGAACACCTTTCATAGGTGCCACATTTAGAAACACTTTGTCACCTACCTCAGACTTTGAATCTCGCCGTCTCACACTAGCGCAAGTTTTCTATTTGCTCTGAGCTGTTTGCATCATTGCCCTAATCTTTTGAATAGTCTCATTAGTAATCTGCACTAACTCAGGCCCCAACAATTTTCGCTCCCCAACCTCCTCCCAACAAACAGGAGTCCTACAACTCTTCACAAAATACAATATAAATTTTACTTCACAAAATACAATATAAAATTTACTTACTTTAATTTTTTTTTCCATTAATCAAATCCTTCCACATCCACCAAAATAGTATATTTACATTATTCCCTAACAAAAAATTCCACCAATTTAACCCAAAATTTCAAAATAATTTCAAAATAACCTAAAAATTTCGAATTTTCAAATTGAATCCAACCTTTAAATCTCCAAACTACATTCAATTCTCTACCAATTGAATTAACCGAATATTTTCTCAACACCGAACCAATTAAACTTCAAAATTCAAACAATTAACTAAAATAATCCAAGATAATTAATTCAAAATATTTTAAACATTTGGGATGTCACATGACGATTTACCTCCTAATGCTATTATGATACCAGAAGCCAACAAGTTTCCTACTACGTACTGAAAGGTGGCGAATTTCCTACTATGATACTAGAAACCGACGAGTTTCCTATTACGTTACTGGAAGCCTACGAATTTCCTACTATGTTACCAGAAGCTTACGGGTTTCCTACTATGTTATTGGCGACCTACGGCTTTCCTACCATGTTACCGGGTGGCGACAGGTGCCTTACTATGTTTGTGAGACTTTTGGCCACTAGATGAGTGTTAGGATGAGTTAAATTACTCACTAGATAGCCATCCAAGATTAAATTACTTATGCGTGTCTCACTACTACGTTGCACCTTTTGGGTATGGGTGCTTAGCTTGACCTTAGTAGTGGGGTTACTTATTGACTATTTTGTACTCATCCTTCTTATTATGTTTTTTCAGGTAAAAGAAATGACACTTGGCAAACGATGGAAGGAAACCTTGACTGTGCCGTTGGGATTAGACTAATGCTTCCACACGAGTTTTCATGTTTTCCTTCGTTTTAATACTTGGGATTTTTGTTATTGAAACTAAAACTATGTTTTCCTTTATTTATTTCTTCATGTCAAATTTCCTATTTTAATACATTAATGTTTTAGGGGGGTCCCAATTAAAGGTTTTTGGTTTAAACGAAGTCAAATTTATTTACCTTAATGATGTTTCCTCAATTTTTAGTAAAATTATGAAAAATAGTCGTTTGACATGTATGCATGCATATAATGACGACTTAGTTCAAGTCCTAGGAAGTCAGGTCGTTACAAAATTGGTAACCAGTTTGGTGATAAACCACCTACGTCTAAGGAGCAGTGTATCCGAGAAAGATAATCCGTTAATATGAAATAATTACGAAATTACAATGTTGTATTTATCTGTGAACAACTTTAAGCATAGTGACACATGTAGAGCCTAACCTAGCTAACTACCTAGGTTTCCCTTAGATGTGAGACTCCCTCTTAAGTAACATAGGCTCCCCTTAAGTAATCGTAAATAAATGGTGCAAAAAACTTAGGCGTAAGACTCCTTCTCATTTAATATTATCTTTCTCATTCTTGTGAAATCCTTCATGTTGAGTAATGGCTTAGGCTCCCCTGAGTGAAGAGAATTCCTTCTTGTGAGATCCTTCAAGTTGAATAATAGCTCAAGCCCCCCCAGAGTAAAGAGAACTCCTTCTTGGTTAAAATGGTCTTAGGCTCCCCCAAGATGGAACAACATGCAATACTCATACTTAGTTAAGCAGAACGGTGAAGATTAAGTTGCGTCTAGGAAAAAACAATCTTCCCCAAGGTGCATAAAGAACAAAGCTTTTGGTATAATCGAATTACACTCTCATGGTATGTTGAAGCGACTACCCTAGCTCACGAGCTTTTTATGCTTAAATAGCACTACTGAAAGATGGAAAGTAATCCCAGAAAATATTGGCATTCAACAATTAAGGCAAATATCTTAGAAGAAATATTATGAAGAATAATTTAAATAAGGAATGAATTATTCGGTAGAGTTGGCACCTTAAGGAAAAACCATTAAGACAAGAACCTCTAGAGACAAGATCAGAGACATATCCAAAGCAACCCAAAACTACAACACTAAGAAACTTAAACAAATATATTTAGCCAATATCATATTTTCTAACACCTTAGCCAACGATTGACATGATAAACGTCCCGATATTGTTGGGATACTTCAAAAACTAAAAAATAGAAGAGAAATAGAGAGAATTTCACCCAAAATCGGGTGGTGGAAGATTGGTTTTACCCTAGGCGACTAAACTAATTCATAACAAATTGGGCAAGTGCCTACGCGCTATGAAACCCTTGGGCATGATCCAAAGCCTCACGAAGCTATAAGGTAGCATCGCAACACTGCACCAAATAGTGCTCTCAGGACCCAAGGGCCTAGTGCAATGCCTAAGCGCTAGGTTGCCTTGCCAAAAGCTCCTTTTGTCCTCCCAGTTGCTATTAAATGCCCCGTCTTAACTCGTTTTAACTCCATTTAAGCTCTAATGCCTAGTTCTACCTCTCAAGTGCTTGATTTCTGCAAAATAATGAAATAAATATATAAAACCAAAAAACGACTTCAAATTAAGCGGAGCTAGATAGCACATTTTCAGTGCTATCACATCACGAAAAGTAAACAAGTCATCTCACTTGCAAAATTGGTTGGTGGATCAATACAAACCACACGCACTAGAATAAGGTATTTGTATAAGAATATCATTTTTCTTGTAAGGAATTTTAAAATAAAAGATCACGAACCTTTAAAAATATCATTTTTTTATAAGGAAAATAAAGTATGAATTATTTACTTTAATTAATAAAACATTTTATTTATCTTTATAGTAAATAAAATAAATAATTCCTTGTTTTTGCAAACATATAATAATATACATATGAAAAGATAAAGATTTTCATTTACCAGTAGTCCTTATAAGCTAGCGTTGAATTTTATCACTATTTTTAAAAACAAATCTTAAAAATATTTGTGGACCATTTAGATATTAAGATATTAATGAATAACGACTTAAAAATTAGTTGAAAAGTCTTCATAGATCCTATGTAAAATAGAAAAACACTTCACATTGTCAAGACATTTCCATTTTTAACGTAGCATTGCAACAACTCTTCTCACACAACCACTAATCTAAAACTACCTACATTTAAGAACATTCACAAAAAAAACTACATCTTGCACTATAAATAAATAGACATTCATTAGTCCTCATTCATGCATCCAAATACAAATAAATTATACAAAAAGACTCGAATCTTTTCTCCCAAGTACATATAATTAACAATGGCATTAAAACGACTTATGCTATTGTTAATTGTCTTGCTAGTAACCTCGTTGAACACGTTGATGGCAAAAGACAAAAAGTTTCCGAAAAACAAAAATACGAAGCCAAAGTTACCGCTACCGAATGATCCTATCATTTCATTTGTGAAATTTCGTGTAGAGATTCACAACAATTTGCATATGTACTTATTAGACAGCCATTGCTACTCCAAAGACGATGATTTAGGATTGCATGTGTTGTTCCCAAATGAGCAGCAAAATTGGTCGTTTAAAGGGAATTGGATTGACACAACAGATTTCCATTGTAGGTTGGAATGGGAAGAAGGGTATTTAGAATTTGAAAGTTTTGTTAGTCATCCTGACTTTGTGATCAATAATTGTTGCAACAAAACCTGCATTTGGAGTGCCAGACAAGATGGGATTTATTTGAATGATGCAAGTGGGAAAGAAATTTTTTTTTATTACTGGGATATGCTTAGATAGAAGGTCTAGAACCAATGGGATATGTTATTTAGTGAATATACACATTATCCTATTTTATATAAGGAAATGTTGCCGATCGCTGGGGGGACTTGATTCACCGTTGTTTTTTTTATTTATTTATTATTTTATTATTTTATTATTTTATGATTTTATCCTCATTTGTTATCAGAAAATATATCTAATATACTTTATATTTTGGTATGTGAGTCGATTGATATACATTATATTTGGTATATCAATCAATTGATTTACTTCATTTAAAGAATATCATTTTTATACAATTGATACATCATGAATTTAATTGGTTTATGGTTGATGTTATTGTTTGTTTGATTATGATAAATATTTATTTTCATTCGATTAGTTCAATTTTGATGTTGATGGTATATGTTAAATGTATTAATTTTGTCATATGATATACAAAATATAAATTATATTAGTTACTTTGTTTTGTTTTCAAATTTTTTTATATGATTTTAGTGGTATATAAGTTATATTTAAATTTAGTATATCATGTATAACAAATATTTCATGTTTCATAAATTAATTAATTGATGTACCTAATTTAGAAAGAGAAAAAACATATCAGTGATATTGTTGGTATACCAAATATGAAGTATATCATTTAGAATGATATTCAAAGTTTAATATTGGCATTTCAATTGTATATTAGTACTAATTCAAAATGAATTACAAAGTAGATCATAAAAAATTAATTTCAAGTATATCATCAGTGTATTAGTAATATACTAAAATTTCTTCTATATAAAATTTGAAGTATAATATTGGTATATTAGTATATAAATATCAACATTAGCTCAAAATTTTATTCAAGTATAAAATAGTTGTATATTATTAGTATATCAATACTTCTTAAAAATACATTTGTTCAAGTATATCAATTATATATTAACACAGGTTCAAAATTCAATTTCTAGTGTAACACTGGTGTACTAATAGTTTATCAACATTCATTCCAAATGGTTCCTAATATAAGGATTGAACAATTCTAAGCTGATTATAATGTGGTAGAAAAAAATATTCTATAACAAACAGATAAGGATTGACATTAAATCCACATATAATGGTAAATGAACAAGCACTTCTCGATTGATATATATGGTCTATGAATGATAAATTTGGTATATTCATAATATAACTTACACACTTTATGTTTTGTATATTAGACAACTGATATACTAAATATAAAGTATATCCGATAAACTTTTAGGTTGGGGGAAGCCTGGTGAGACTTCTGGTGAAGGTCAAAGTTTGACCGGGAAGCATCCAACCCTGGAAAAAGAAAAGCGAAACTAGAACAAAGAAGCCAAAGAAGGTTCTGGAGGAGGAAGGGGGCTGGGAGAAGCCTACATCCAATTGGAATATCAAGCAGTCTTGGGGCAATGACAACATGGAAGAGGAGCTTGGGGTAAATCCAATTCTGCAGAAGACGGGAAGTTATCTTTTGGTTGGGGTCGCTGATGAATGACAATGGTGCAACACAATGCAACAGATCTTTCACCCGTTTTTGGGGAGACGACGACAATCATCCTCATTTCCACAGCTGTGTTGGGGAACAAGACATGTTTTAAAAGATAAAAATAGAAGAAAAAAAAGTATACCAGATATACTAATAT

mRNA sequence

ATGTCACTTCCTCAAACTGATAGTTCTGCCACAGAACTTTTACTAGCGCTATTTCACGATTGCGTAAGGCCTTTACTTCCCTTGCGAGAATTTGGACAAACTTGTCTTCATAACTCAAATTCTTATTCAATTGCAATGGCTCATAGTCAACTACGTGAGCGGTTCGACTCTAAGCCGTGGAAAGAGTCAAAGACTTTTAGTGAAGTACCCAAGAGGAACTTGGGAAGTGGACGTAGAAGCCAACAAGTTTCCTACTACGTACTGAAAGGTGGCGAATTTCCTACTATGATACTAGAAACCGACGAGTTTCCTATTACGTTACTGGAAGCCTACGAATTTCCTACTATGTTACCAGAAGCTTACGGGTTTCCTACTATGTTATTGGCGACCTACGGCTTTCCTACCATGTTACCGGGTGGCGACAGCCATTGCTACTCCAAAGACGATGATTTAGGATTGCATGTGTTGTTCCCAAATGAGCAGCAAAATTGGTCGTTTAAAGGGAATTGGATTGACACAACAGATTTCCATTGTAGGTTGGAATGGGAAGAAGGCGAAACTAGAACAAAGAAGCCAAAGAAGGTTCTGGAGGAGGAAGGGGGCTGGGAGAAGCCTACATCCAATTGGAATATCAAGCAGTCTTGGGGCAATGACAACATGGAAGAGGAGCTTGGGGTAAATCCAATTCTGCAGAAGACGGGAAGTTATCTTTTGGTTGGGGTCGCTGATGAATGACAATGGTGCAACACAATGCAACAGATCTTTCACCCGTTTTTGGGGAGACGACGACAATCATCCTCATTTCCACAGCTGTGTTGGGGAACAAGACATGTTTTAAAAGATAAAAATAGAAGAAAAAAAAGTATACCAGATATACTAATAT

Coding sequence (CDS)

ATGTCACTTCCTCAAACTGATAGTTCTGCCACAGAACTTTTACTAGCGCTATTTCACGATTGCGTAAGGCCTTTACTTCCCTTGCGAGAATTTGGACAAACTTGTCTTCATAACTCAAATTCTTATTCAATTGCAATGGCTCATAGTCAACTACGTGAGCGGTTCGACTCTAAGCCGTGGAAAGAGTCAAAGACTTTTAGTGAAGTACCCAAGAGGAACTTGGGAAGTGGACGTAGAAGCCAACAAGTTTCCTACTACGTACTGAAAGGTGGCGAATTTCCTACTATGATACTAGAAACCGACGAGTTTCCTATTACGTTACTGGAAGCCTACGAATTTCCTACTATGTTACCAGAAGCTTACGGGTTTCCTACTATGTTATTGGCGACCTACGGCTTTCCTACCATGTTACCGGGTGGCGACAGCCATTGCTACTCCAAAGACGATGATTTAGGATTGCATGTGTTGTTCCCAAATGAGCAGCAAAATTGGTCGTTTAAAGGGAATTGGATTGACACAACAGATTTCCATTGTAGGTTGGAATGGGAAGAAGGCGAAACTAGAACAAAGAAGCCAAAGAAGGTTCTGGAGGAGGAAGGGGGCTGGGAGAAGCCTACATCCAATTGGAATATCAAGCAGTCTTGGGGCAATGACAACATGGAAGAGGAGCTTGGGGTAAATCCAATTCTGCAGAAGACGGGAAGTTATCTTTTGGTTGGGGTCGCTGATGAATGA

Protein sequence

MSLPQTDSSATELLLALFHDCVRPLLPLREFGQTCLHNSNSYSIAMAHSQLRERFDSKPWKESKTFSEVPKRNLGSGRRSQQVSYYVLKGGEFPTMILETDEFPITLLEAYEFPTMLPEAYGFPTMLLATYGFPTMLPGGDSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEGETRTKKPKKVLEEEGGWEKPTSNWNIKQSWGNDNMEEELGVNPILQKTGSYLLVGVADE
Homology
[Close]
BLAST of Clc07G05340 vs. NCBI nr
Match: KAE8648167.1 (hypothetical protein Csa_018435 [Cucumis sativus])

HSP 1 Score: 95.5 bits (236), Expect = 6.7e-16
Identity = 38/45 (84.44%), Postives = 42/45 (93.33%), Query Frame = 0 

Query: 141 DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG 186
           DSHCYSKDDDLGLH+LFP+E+Q+WSFKGNWI TT FHCRLEWE G
Sbjct: 62  DSHCYSKDDDLGLHILFPDEKQDWSFKGNWIATTSFHCRLEWEVG 106

[Close]
BLAST of Clc07G05340 vs. NCBI nr
Match: KAE8648173.1 (hypothetical protein Csa_018428 [Cucumis sativus])

HSP 1 Score: 92.4 bits (228), Expect = 5.7e-15
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 0 

Query: 141 DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG 186
           DS CYSKDD+ GLHVLFP+EQQNWSFKGNW DTT FHCRLEWE G
Sbjct: 65  DSRCYSKDDNFGLHVLFPDEQQNWSFKGNWDDTTTFHCRLEWEIG 109

[Close]
BLAST of Clc07G05340 vs. NCBI nr
Match: KAE8648169.1 (hypothetical protein Csa_018483, partial [Cucumis sativus] >KAE8648171.1 hypothetical protein Csa_018506, partial [Cucumis sativus])

HSP 1 Score: 92.4 bits (228), Expect = 5.7e-15
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 0 

Query: 141 DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG 186
           DS CYSKDD+ GLHVLFP+EQQNWSFKGNW DTT FHCRLEWE G
Sbjct: 65  DSRCYSKDDNFGLHVLFPDEQQNWSFKGNWDDTTTFHCRLEWEIG 109

[Close]
BLAST of Clc07G05340 vs. NCBI nr
Match: XP_008453055.1 (PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo])

HSP 1 Score: 89.0 bits (219), Expect = 6.3e-14
Identity = 33/45 (73.33%), Postives = 41/45 (91.11%), Query Frame = 0 

Query: 141 DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG 186
           DSHCYSKDDDLG  VL+PN++Q+WSF+GNW+ TT+FHC+LEWE G
Sbjct: 44  DSHCYSKDDDLGTKVLYPNDEQSWSFRGNWLGTTNFHCKLEWENG 88

[Close]
BLAST of Clc07G05340 vs. NCBI nr
Match: XP_022933678.1 (S-protein homolog 2-like [Cucurbita moschata])

HSP 1 Score: 85.5 bits (210), Expect = 6.9e-13
Identity = 32/45 (71.11%), Postives = 40/45 (88.89%), Query Frame = 0 

Query: 141 DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG 186
           D+HC SKDDDLGLH+LFP+E+Q+WSF  NW+ TT+FHCRLEW+ G
Sbjct: 69  DAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRLEWQYG 113

[Close]
BLAST of Clc07G05340 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 8.0e-04
Identity = 18/40 (45.00%), Postives = 25/40 (62.50%), Query Frame = 0 

Query: 143 HCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEW 183
           HC S DDDLGL +L PN   ++ F+ + + TT F+C   W
Sbjct: 54  HCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTW 93

[Close]
BLAST of Clc07G05340 vs. ExPASy TrEMBL
Match: A0A0A0KL79 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G016040 PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 3.2e-16
Identity = 38/45 (84.44%), Postives = 42/45 (93.33%), Query Frame = 0 

Query: 141 DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG 186
           DSHCYSKDDDLGLH+LFP+E+Q+WSFKGNWI TT FHCRLEWE G
Sbjct: 42  DSHCYSKDDDLGLHILFPDEKQDWSFKGNWIATTSFHCRLEWEVG 86

[Close]
BLAST of Clc07G05340 vs. ExPASy TrEMBL
Match: A0A0A0KIQ4 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G017790 PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.7e-15
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 0 

Query: 141 DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG 186
           DS CYSKDD+ GLHVLFP+EQQNWSFKGNW DTT FHCRLEWE G
Sbjct: 65  DSRCYSKDDNFGLHVLFPDEQQNWSFKGNWDDTTTFHCRLEWEIG 109

[Close]
BLAST of Clc07G05340 vs. ExPASy TrEMBL
Match: A0A1S3BUQ9 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103493877 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 3.0e-14
Identity = 33/45 (73.33%), Postives = 41/45 (91.11%), Query Frame = 0 

Query: 141 DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG 186
           DSHCYSKDDDLG  VL+PN++Q+WSF+GNW+ TT+FHC+LEWE G
Sbjct: 44  DSHCYSKDDDLGTKVLYPNDEQSWSFRGNWLGTTNFHCKLEWENG 88

[Close]
BLAST of Clc07G05340 vs. ExPASy TrEMBL
Match: A0A6J1F5H5 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111441018 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 3.4e-13
Identity = 32/45 (71.11%), Postives = 40/45 (88.89%), Query Frame = 0 

Query: 141 DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG 186
           D+HC SKDDDLGLH+LFP+E+Q+WSF  NW+ TT+FHCRLEW+ G
Sbjct: 69  DAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRLEWQYG 113

[Close]
BLAST of Clc07G05340 vs. ExPASy TrEMBL
Match: A0A6J1FMU2 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111447244 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.1e-11
Identity = 28/45 (62.22%), Postives = 39/45 (86.67%), Query Frame = 0 

Query: 141 DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG 186
           DSHC SKDDDLG+ V++P+++Q WSF+GNW+ +T+FHC+LEW  G
Sbjct: 66  DSHCCSKDDDLGVRVIYPDDEQRWSFRGNWLGSTNFHCKLEWAYG 110

[Close]
BLAST of Clc07G05340 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 45.8 bits (107), Expect = 5.7e-05
Identity = 18/40 (45.00%), Postives = 25/40 (62.50%), Query Frame = 0 

Query: 143 HCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEW 183
           HC S DDDLGL +L PN   ++ F+ + + TT F+C   W
Sbjct: 54  HCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTW 93

[Close]
BLAST of Clc07G05340 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 44.3 bits (103), Expect = 1.7e-04
Identity = 24/65 (36.92%), Postives = 34/65 (52.31%), Query Frame = 0 

Query: 122 GFPTMLLATYGFPTMLPGGDS---HCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHC 181
           G P    AT    T L GG     HC SK DDLG+HV+   ++ ++ F+ N   +T F C
Sbjct: 21  GLPPFWRATVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFC 80

Query: 182 RLEWE 184
             +W+
Sbjct: 81  SFQWD 85

[Close]
BLAST of Clc07G05340 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 42.0 bits (97), Expect = 8.2e-04
Identity = 17/39 (43.59%), Postives = 24/39 (61.54%), Query Frame = 0 

Query: 143 HCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLE 182
           HC SKDDDLG H+L   +   ++F  N   TT F C+++
Sbjct: 44  HCRSKDDDLGEHILKIGQDYEFTFGDNIWQTTSFSCQMD 82

The following BLAST results are available for this feature:
BLAST of Clc07G05340 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8648167.16.7e-1684.44hypothetical protein Csa_018435 [Cucumis sativus][more]
KAE8648173.15.7e-1584.44hypothetical protein Csa_018428 [Cucumis sativus][more]
KAE8648169.15.7e-1584.44hypothetical protein Csa_018483, partial [Cucumis sativus] >KAE8648171.1 hypothe... [more]
XP_008453055.16.3e-1473.33PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo][more]
XP_022933678.16.9e-1371.11S-protein homolog 2-like [Cucurbita moschata][more]
BLAST of Clc07G05340 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FMQ48.0e-0445.00S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1[more]
BLAST of Clc07G05340 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KL793.2e-1684.44S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G016040 PE=3 SV=1[more]
A0A0A0KIQ42.7e-1584.44S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G017790 PE=3 SV=1[more]
A0A1S3BUQ93.0e-1473.33S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103493877 PE=3 SV=1[more]
A0A6J1F5H53.4e-1371.11S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111441018 PE=3 SV=1[more]
A0A6J1FMU23.1e-1162.22S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111447244 PE=3 SV=1[more]
BLAST of Clc07G05340 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G12060.15.7e-0545.00Plant self-incompatibility protein S1 family [more]
AT1G04645.11.7e-0436.92Plant self-incompatibility protein S1 family [more]
AT5G04350.18.2e-0443.59Plant self-incompatibility protein S1 family [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010264Plant self-incompatibility S1PFAMPF05938Self-incomp_S1coord: 142..195
e-value: 7.2E-11
score: 42.5
IPR010264Plant self-incompatibility S1PANTHERPTHR31232FAMILY NOT NAMEDcoord: 141..186
NoneNo IPR availablePANTHERPTHR31232:SF47SUBFAMILY NOT NAMEDcoord: 141..186

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc07G05340.1Clc07G05340.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0060320 rejection of self pollen
cellular_component GO:0005576 extracellular region