Clc07G05260 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAAAATCTCATCGCTATTATAATTTCTTGGGTATTTCAGTTTACATCCAAAATCGGCCAAGAGAAACAAATCCTGTGGTTTCCAGATACTATATTCATAGACATGGAGCCCGCGGATTTTTCTCACGCTGGTATCCCGGCGGAGACAAGGAGGAAGATCACGGCGAAGCTTCTCTCCGGCCGACAGTCTGCAGCTCGCCTTCAGAGTCTTCTCCAGTCGGCGGCGGCGGCGGACCACGACCCCCTAGCTCTTGCCACAAAGATCTTGACTTCTTTCAATGAATCCATCTCCATACTAGAGTCGGCCGCAGCGGAGTTGAGCTGTCCGGATCATTCCCTTTGCTCCGATCTGGATTCCGGCGACTCACGGGGGAGCACGGCGGTTAAGAATCATCAAGGACGTGCCAACAAAAGAAGGTGTGTCTTAATTAAAATTTGGGTGGAGATTATTTATTTATTATTTTTGATATATATAATATATTGTGGGAGATGTAACGGTTAAGAGAGGTGGGGAATTGCAGAAGATTGATGAATACGAGAGTTGTTATGACGGCAACGACGGAAGACAAATATGGTTGGAGGAAATACGGCCAAAAGGTTATCCTCAACGCAACCTATCCAAGGTATTTTATCTATCTATCCATTTTTCTTTTTACAAATAAAAACAATTAAACTTTCTTATTTTTTTACCTACAATTCTCGATTATATATATTTAAACTAGTTGAGTTATGTATTAATAACTACATCTTAACTTTGACTTTTTCTCAAATTCATTTGTCTCGTCGTGAGTGAGCTGTTTCTAACCCACGTATGTACTTTCACTATTTTTTAAATAAAATTAATTTTTTAATACAACAAACTCTCCCCACCTACTTTTTCTCTTACCATAAATCTCTCTATCCATTTACTCAATACACATCTCTCCATTAATATAAATTCACTTGCTAATCTATTTCTACATATATACTTTCATTTATTATATTGGCATACATGGGCTTAGTGTTTCTTTCTTTTCTTTACTTCTTTTTAACCTTTTGTTTGGAAAAGTACTTATTGTAGAAGTAATTCTTCTTTCTTTCCTCCTCCCCCCCCCCCCCCCCCCCAAAAAAAAAGTACTTAATTGTAGAAGTAATTTGGATAGAGACACTTCATAAAAGGGAAAACAAAAACATAACCCCACAGTTTAGAATAGCGTACTTCATAAGCGAAGTTGGAAAATTTTGTCGGATGATACAAACTTTTTTATATTCTTAATTAGGTTATTTATATACACACGATGGAAATTATAGAGTAAATTTTTCATTTTTAACATTGTATTCAAGACAAACTAATAATATAATAAAATCACTCGTCTTGTCCTCATTTCTTGGCTTCATCCTTGACAGAATTTTAGATATTAAAAAATGTTGAAATTATAATGGTTGGGGTTAACTTTCCCAATATTTCAAAATGTTAAAACCTACCAAGTTTATTCTTAAATTTTTAATCTCTAATACTATATTATATAAATATGAGGTTTCTCTCTTGAGTTCAATATTGATAATCAATTAAGATTGTGAGATCTCATCATCTTTCTTATCCGAAATCCTCAACACTTGTATTAAATAGTAACACCTGAACTTTAATTATGTCCTATAAATTTTGAACTTTCAATTTTGCATATAATAGATTCTTGAAATCTAAGAATTAGTATATCTAATAATCCTCAATATTCAATTTTTTATCTAATTGGTCACTTTCTATTTCTTAAAATTTCACTAATTTATTAGACATACGTTTGAAAGTTTAATATCTTGTTAAACACAAGATTCAACTTTATATCTAATATTAAAAACGACAGGTTGAAATGTCCAAAAACCTATTAGCTAGATATTTTACCAAACCTCATTCACTGAAGTTATAATAATTTAGCATTCAAACATTGATAATAATTTTGAATGAATGAATAAAACAGGAGCTATTTTAGGTGCACTCACAAGTACGATCAAGGCTGTAGAGCCACAAAGCACGTGCAAAGAATGGAGGGTATGGATTCAGAAATAATGTACAAGATCACCTACATCTGTGACCACACGTGTAGCACCGCTTCACAGATCATCGCTTCTGCCGTTGCCTCCGCTTCCGATTCTTACAACCTCATATCGTTCTCCAACTCTCACAACGGTCAATTGATCGAGGGTACTGGCCACAGTTTCTTTTGTCCAAATAATGACGATGCAATGAAGGTGAGAGAGACAACGACGACGAGTGGTTCGACAAATCATGAGGTTGATCTGTGGTCAGAGTTGAAGGATTTTGGGAGCTTGCAAACAACGACAATGACAAATCAATATTATTTCTCGACGGGAGACGATGATGCTGATTCTCTCATGTTTTGGAATGGTTGTTTACAATAATTTTTGTTTAGCATTTGGACAAATTGCAGCATATTATACAATAGAATCAAAATAACACCCTAGAGATGATGGATATGTCTTTAACGTTGATGATACCTTAAATTTATGTGTAGTACTAATAATTTCTTTGAATATATTTTTAGGGTTTTTATGTGTAGTATAAATTTTAAATTGTTATTATTATTATTATTATTTTAACTACGTCCGTTATAATGTTTATGTTATTTTTGAAATAAAATATGTCTTGAAGTCTTTTTCAG TAAAAATCTCATCGCTATTATAATTTCTTGGGTATTTCAGTTTACATCCAAAATCGGCCAAGAGAAACAAATCCTGTGGTTTCCAGATACTATATTCATAGACATGGAGCCCGCGGATTTTTCTCACGCTGGTATCCCGGCGGAGACAAGGAGGAAGATCACGGCGAAGCTTCTCTCCGGCCGACAGTCTGCAGCTCGCCTTCAGAGTCTTCTCCAGTCGGCGGCGGCGGCGGACCACGACCCCCTAGCTCTTGCCACAAAGATCTTGACTTCTTTCAATGAATCCATCTCCATACTAGAGTCGGCCGCAGCGGAGTTGAGCTGTCCGGATCATTCCCTTTGCTCCGATCTGGATTCCGGCGACTCACGGGGGAGCACGGCGGTTAAGAATCATCAAGGACGTGCCAACAAAAGAAGAAGATTGATGAATACGAGAGTTGTTATGACGGCAACGACGGAAGACAAATATGGTTGGAGGAAATACGGCCAAAAGGTTATCCTCAACGCAACCTATCCAAGGAGCTATTTTAGGTGCACTCACAAGTACGATCAAGGCTGTAGAGCCACAAAGCACGTGCAAAGAATGGAGGGTATGGATTCAGAAATAATGTACAAGATCACCTACATCTGTGACCACACGTGTAGCACCGCTTCACAGATCATCGCTTCTGCCGTTGCCTCCGCTTCCGATTCTTACAACCTCATATCGTTCTCCAACTCTCACAACGGTCAATTGATCGAGGGTACTGGCCACAGTTTCTTTTGTCCAAATAATGACGATGCAATGAAGGTGAGAGAGACAACGACGACGAGTGGTTCGACAAATCATGAGGTTGATCTGTGGTCAGAGTTGAAGGATTTTGGGAGCTTGCAAACAACGACAATGACAAATCAATATTATTTCTCGACGGGAGACGATGATGCTGATTCTCTCATGTTTTGGAATGGTTGTTTACAATAATTTTTGTTTAGCATTTGGACAAATTGCAGCATATTATACAATAGAATCAAAATAACACCCTAGAGATGATGGATATGTCTTTAACGTTGATGATACCTTAAATTTATGTGTAGTACTAATAATTTCTTTGAATATATTTTTAGGGTTTTTATGTGTAGTATAAATTTTAAATTGTTATTATTATTATTATTATTTTAACTACGTCCGTTATAATGTTTATGTTATTTTTGAAATAAAATATGTCTTGAAGTCTTTTTCAG ATGGAGCCCGCGGATTTTTCTCACGCTGGTATCCCGGCGGAGACAAGGAGGAAGATCACGGCGAAGCTTCTCTCCGGCCGACAGTCTGCAGCTCGCCTTCAGAGTCTTCTCCAGTCGGCGGCGGCGGCGGACCACGACCCCCTAGCTCTTGCCACAAAGATCTTGACTTCTTTCAATGAATCCATCTCCATACTAGAGTCGGCCGCAGCGGAGTTGAGCTGTCCGGATCATTCCCTTTGCTCCGATCTGGATTCCGGCGACTCACGGGGGAGCACGGCGGTTAAGAATCATCAAGGACGTGCCAACAAAAGAAGAAGATTGATGAATACGAGAGTTGTTATGACGGCAACGACGGAAGACAAATATGGTTGGAGGAAATACGGCCAAAAGGTTATCCTCAACGCAACCTATCCAAGGAGCTATTTTAGGTGCACTCACAAGTACGATCAAGGCTGTAGAGCCACAAAGCACGTGCAAAGAATGGAGGGTATGGATTCAGAAATAATGTACAAGATCACCTACATCTGTGACCACACGTGTAGCACCGCTTCACAGATCATCGCTTCTGCCGTTGCCTCCGCTTCCGATTCTTACAACCTCATATCGTTCTCCAACTCTCACAACGGTCAATTGATCGAGGGTACTGGCCACAGTTTCTTTTGTCCAAATAATGACGATGCAATGAAGGTGAGAGAGACAACGACGACGAGTGGTTCGACAAATCATGAGGTTGATCTGTGGTCAGAGTTGAAGGATTTTGGGAGCTTGCAAACAACGACAATGACAAATCAATATTATTTCTCGACGGGAGACGATGATGCTGATTCTCTCATGTTTTGGAATGGTTGTTTACAATAA MEPADFSHAGIPAETRRKITAKLLSGRQSAARLQSLLQSAAAADHDPLALATKILTSFNESISILESAAAELSCPDHSLCSDLDSGDSRGSTAVKNHQGRANKRRRLMNTRVVMTATTEDKYGWRKYGQKVILNATYPRSYFRCTHKYDQGCRATKHVQRMEGMDSEIMYKITYICDHTCSTASQIIASAVASASDSYNLISFSNSHNGQLIEGTGHSFFCPNNDDAMKVRETTTTSGSTNHEVDLWSELKDFGSLQTTTMTNQYYFSTGDDDADSLMFWNGCLQ Homology
BLAST of Clc07G05260 vs. NCBI nr
Match: ACV29874.1 (WRKY70 [Citrullus lanatus]) HSP 1 Score: 559.3 bits (1440), Expect = 1.9e-155 Identity = 281/284 (98.94%), Postives = 283/284 (99.65%), Query Frame = 0
BLAST of Clc07G05260 vs. NCBI nr
Match: XP_038891298.1 (probable WRKY transcription factor 54 [Benincasa hispida] >AMH38846.1 WRKY transcription factor 34 [Benincasa hispida var. chieh-qua]) HSP 1 Score: 406.0 bits (1042), Expect = 2.7e-109 Identity = 214/291 (73.54%), Postives = 237/291 (81.44%), Query Frame = 0
BLAST of Clc07G05260 vs. NCBI nr
Match: KAA0067020.1 (putative WRKY transcription factor 70 [Cucumis melo var. makuwa] >TYK26256.1 putative WRKY transcription factor 70 [Cucumis melo var. makuwa]) HSP 1 Score: 373.2 bits (957), Expect = 1.9e-99 Identity = 209/290 (72.07%), Postives = 229/290 (78.97%), Query Frame = 0
BLAST of Clc07G05260 vs. NCBI nr
Match: XP_008456968.1 (PREDICTED: LOW QUALITY PROTEIN: probable WRKY transcription factor 70 [Cucumis melo]) HSP 1 Score: 334.7 bits (857), Expect = 7.7e-88 Identity = 192/287 (66.90%), Postives = 215/287 (74.91%), Query Frame = 0
BLAST of Clc07G05260 vs. NCBI nr
Match: XP_031740808.1 (probable WRKY transcription factor 54-like isoform X1 [Cucumis sativus] >KGN50748.1 hypothetical protein Csa_005890 [Cucumis sativus]) HSP 1 Score: 316.6 bits (810), Expect = 2.2e-82 Identity = 183/288 (63.54%), Postives = 212/288 (73.61%), Query Frame = 0
BLAST of Clc07G05260 vs. ExPASy Swiss-Prot
Match: Q93WU8 (Probable WRKY transcription factor 54 OS=Arabidopsis thaliana OX=3702 GN=WRKY54 PE=1 SV=2) HSP 1 Score: 112.1 bits (279), Expect = 1.1e-23 Identity = 102/322 (31.68%), Postives = 152/322 (47.20%), Query Frame = 0
BLAST of Clc07G05260 vs. ExPASy Swiss-Prot
Match: Q9LY00 (Probable WRKY transcription factor 70 OS=Arabidopsis thaliana OX=3702 GN=WRKY70 PE=1 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.4e-23 Identity = 73/191 (38.22%), Postives = 104/191 (54.45%), Query Frame = 0
BLAST of Clc07G05260 vs. ExPASy Swiss-Prot
Match: Q0DFT7 (Transcription factor WRKY19 OS=Oryza sativa subsp. japonica OX=39947 GN=WRKY19 PE=2 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 2.3e-18 Identity = 66/185 (35.68%), Postives = 100/185 (54.05%), Query Frame = 0
BLAST of Clc07G05260 vs. ExPASy Swiss-Prot
Match: K4BIZ9 (WRKY DNA-binding transcription factor 70 OS=Solanum lycopersicum OX=4081 GN=WRKY70 PE=2 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 6.7e-18 Identity = 64/171 (37.43%), Postives = 95/171 (55.56%), Query Frame = 0
BLAST of Clc07G05260 vs. ExPASy Swiss-Prot
Match: Q9SUP6 (Probable WRKY transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=WRKY53 PE=1 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 2.9e-13 Identity = 35/65 (53.85%), Postives = 45/65 (69.23%), Query Frame = 0
BLAST of Clc07G05260 vs. ExPASy TrEMBL
Match: C8CP45 (WRKY70 OS=Citrullus lanatus OX=3654 PE=2 SV=1) HSP 1 Score: 559.3 bits (1440), Expect = 9.3e-156 Identity = 281/284 (98.94%), Postives = 283/284 (99.65%), Query Frame = 0
BLAST of Clc07G05260 vs. ExPASy TrEMBL
Match: A0A120MFL1 (WRKY transcription factor 34 OS=Benincasa hispida var. chieh-qua OX=1208597 PE=2 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 1.3e-109 Identity = 214/291 (73.54%), Postives = 237/291 (81.44%), Query Frame = 0
BLAST of Clc07G05260 vs. ExPASy TrEMBL
Match: A0A5A7VII1 (Putative WRKY transcription factor 70 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G00190 PE=4 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 9.4e-100 Identity = 209/290 (72.07%), Postives = 229/290 (78.97%), Query Frame = 0
BLAST of Clc07G05260 vs. ExPASy TrEMBL
Match: A0A1S3C4E8 (LOW QUALITY PROTEIN: probable WRKY transcription factor 70 OS=Cucumis melo OX=3656 GN=LOC103496759 PE=4 SV=1) HSP 1 Score: 334.7 bits (857), Expect = 3.7e-88 Identity = 192/287 (66.90%), Postives = 215/287 (74.91%), Query Frame = 0
BLAST of Clc07G05260 vs. ExPASy TrEMBL
Match: A0A0A0KMB3 (WRKY domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G223070 PE=4 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 1.0e-82 Identity = 183/288 (63.54%), Postives = 212/288 (73.61%), Query Frame = 0
BLAST of Clc07G05260 vs. TAIR 10
Match: AT2G40750.1 (WRKY DNA-binding protein 54 ) HSP 1 Score: 112.1 bits (279), Expect = 7.5e-25 Identity = 102/322 (31.68%), Postives = 152/322 (47.20%), Query Frame = 0
BLAST of Clc07G05260 vs. TAIR 10
Match: AT3G56400.1 (WRKY DNA-binding protein 70 ) HSP 1 Score: 111.7 bits (278), Expect = 9.8e-25 Identity = 73/191 (38.22%), Postives = 104/191 (54.45%), Query Frame = 0
BLAST of Clc07G05260 vs. TAIR 10
Match: AT4G23810.1 (WRKY family transcription factor ) HSP 1 Score: 77.4 bits (189), Expect = 2.1e-14 Identity = 35/65 (53.85%), Postives = 45/65 (69.23%), Query Frame = 0
BLAST of Clc07G05260 vs. TAIR 10
Match: AT5G24110.1 (WRKY DNA-binding protein 30 ) HSP 1 Score: 73.9 bits (180), Expect = 2.3e-13 Identity = 56/173 (32.37%), Postives = 93/173 (53.76%), Query Frame = 0
BLAST of Clc07G05260 vs. TAIR 10
Match: AT1G66550.1 (WRKY DNA-binding protein 67 ) HSP 1 Score: 69.7 bits (169), Expect = 4.3e-12 Identity = 54/169 (31.95%), Postives = 83/169 (49.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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