Clc07G04540 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G04540
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	sister chromatid cohesion 1 protein 1
Location	ClcChr07: 5208281 .. 5214034 (-)
RNA-Seq Expression	Clc07G04540
Synteny	Clc07G04540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTAGCTATGGCGCGCACAGTTCGTTAGTTATTAGCCGAAGCCTAACGAAACTCCACTTCGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGGTTCAAGAGTTTCAAGTTCCTTCAGCAGCGAAAAGGAGAGTTTCATCCACAATGTTTTACTCGCATCAGCTTCTAGCACGCAAGGCTCCTCTCGGCCAAATCTGGTAAAGCCGATTTGAATGCGTTTTTTAATCTGAATAATAAGTATGAATCAATCGAAACTTCATTTGGTTGTTCGTTGTTTCTTGTTTAAGTTACTTCAGAGTAGATGTGGATGTTGTTGATGTATCGATAGATTAGACGAATTGTATTTTTGTGTGTTTTGATGTTATCTTTTATTTTGTGTATCTATGTTACTAAGGATGGCTGCAACAATGCACGCGAAGATTAATCGGAGAAAGCTCGACAAGTTGAACATAATCAAAATTTGGTACGGAAAAACAGATAATGGAGTTAAGTTTCTTCAATTTCTTAGTGTTTGTTTAATTTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTGGATTTGTAGTGAGGAGATTTTGAATCCTTCGGTACCAATGGCTCTAAGACTCTCGGGGATTCTCATGGGTAATCGTCCTTCCAGTTATTCGTATTTTCCAGAATTTTAACGCTCTGTTTTTCATCTCAGCAACAGATTTGTGTCTCTGTTTTATTATTCTCAGGTGGTGTTGTCATTGTCTATGAACGGAAAGTTAAAATTCTTTACGGTAATCTCTATTCACTTTTTTATGAAGGAATATATTGATTTATCGTTCAAACGCTGTCTCTGAAGGATCGCGCATTTGTTTTTTTCCATTTTATCACAGAGGATGTAACTCGTCTCCTGGTAATTGCTCAAATCTGATTTCTATAAATAGAGTACCCTTTGCATTTGTGTCTTCTTATTTTAATGAATATGTTGATTAGCTTTGTTTTTTGAAATTGATTTTCTCAGGTTGAGATAAACGAAGCATGGAAGGTGAAAGCAGCTCCAGAGCCCACCGTCATTCCAAAAGGAAAATCTCTTGCCAAGTCCGTCACTACTTTCCTTCTCTCGACAGTAATGCATGATCATCTAATTATTAATTTACTTGGAAAATGAATGCGTGTGCATTTGAGAATACGAATAGCTTGATAATGGTCCTGGTTGCTTCCGGGTCCAAAATAAGATGGGTTCTTGGGGTAGATAGTGATTTTGGCTCGGAGTTTGTTTGGGGTAGATATTTGTTTTTATTAATTTTTAGTATGTTTTTCATACGTTCACTGTCCAAAATGTAAGATGAGATTGAGAAAGGTTGAGAATGTGGTTTCGACTCTGAATTTGTTTTGTGATGACTTTCATATGTCCACAGTACAAATAAAATGATTTGGGTCTTGAGTGAAGAGGGTGATTTGGTTTCTAAATTTGTTTGGTTATGTAAACATATGTTCACAGCAAAAAATATGATGAGTATACGGTCGGTTAAGAAGGTTATCTTGATTCTGAATTTATTTGGTGACAATTTATGTATTTCCACATGTATTCAGGAAGGAGGCTGTTACTAGGCCTGAGAAGGATCCGAAAGACGTTTCCTATAACACCTCTCCAATGAGGTTTCAACAAACTGCATTTTTTACTATGGTAAGTCGTAGAAGAAAAGGGCATTATTTTGGCTTCAACAGTTTATGGAAAGATATAAATTTCATGTCAGTCCAGAGCACTGTACAAGTGGAATTGGAAGGCTTTAATCCTAAAAAAGTTGCGCTAAGATTGATTTAGGAGAGAGGCAAGCATAGAATAAACTTGTTTGATATTGCCTTAGAAGGGAACTTATTTATTTCTGGCAATTATCACAATATTTGTATGTTCTGTGAAACAAATTATAGGAGTTTGGAAGTTTTTGGGCTAATTTTTAGTTTTTCAATAACCAATTATTGATTGATAGATCTTTTTGTGTTTGCAGCGGCTTGACAGTGTGGATGAACAATATAACAGTGACAAAACAGTGGAAGATGATCCGTCACAAAACTTCCATCAAAGTTTTATTCTGTCCCTTTAACTCATTTCTCACTCATTTTCTGCATAATTCTTAAATTCATGATGCGTTCTACTTCTACCTACTAATGATCTTGGTTGTTCTTTTGGCCAGCTGATGCTGAAAATATAACCTTAGTCGAGCGTTTTGATATGTATCAATCAAATACAAATACGTTCAATCGGTTTGAAAGGTGGATTATTTACTTGCATGGACAGAACTTTGCAGTTATCTATATAATTTCTATACCACCTTCCTCTTTCTCAAAAACTTGAGCCAGCAAACTTACGTCTTCATTGGAGCTCTTGATATTACATTATTCCCAATTCATGGAGCTCTCACTTGCACCGTAGTGATAATTCAACTCATTATTTGAAAACCCTCTGAGGTGAAATAGTAAACAAAGAGGCAACATCAATTTCTTGTGTTGGATTTGTAGATTTGATATTGAAGAGGACGAGGATACACAACCAAATTTTGCATCTGTAGATCAAACACAAATTCCAGCTACTTTCAAAGATTCCCCTCCTCCACAAGACAAGTATCCAGAAGGTAATATACATTATCATGATTTGGTACTTAAAATTCTCTCCGCTGCATCATGTATGTATTCCACATTCATAAATTATACAAACATGTAGTTTTTAAGTTCAATCTTCTCATCTATCATTAATTGGTTCTATATTTTGGAGTTGTTCATATCAAACTATGAACTTTTACTTTGGGAGGAATGAAATAAATGTGACCATATGAACGTTTCATGTACTTGTTTTTTTCATCTCAATATCCTAGACATGTGAATATCTATTCCAAACTCATACTTGAGGGACTGAAAATTATAAATAGCCTCCACTCTTCTCTTTTTCTTATATCTGTCAGTACCAGATTCTACTATATTTCACTTGATGAAAAATAGATCAGACTGGTCGATGGAAACTTTGAACTAAGTAGCCTCTTCCTAAAACAGACTACTCTATTGATTTTTTCAGAAAAGAAATTTTCTATGATTCCTCATACCAACTGAAACTCACAACTCGCTTTAACTTGCTATTACATTCCCAAAGCACTGTCATCTTTGAATGCCAATTTTGGAAGAAATTTCACGTTTTTATGCATTTTCTTACCTGTAGGCCCTCCTGATGCTGAAGTCCAGGACCAACATCTAGAAAGCAACGTTAATCAGCCAGCCTATGAATCCACGGAGCTTAGACAGGTATTCTACTAGTTTGATTAATAAAGAGTAATTTAATTACACAATGCAGGCTTAACCAGACAATGGGGCGTATCCATTCGACACCAGGTGGAGCAGGTGGCAAGAAAAAGGAAAACAAAAAGAACAGCAGCCTCTTTGATGGACTATGAACAAACCATCATTCCTGGACACATATACCAATGTTGGCTGAAAGATGTCTCTGATCTAATCTCTAGAAGAGGAAGAAAGAGAAAGGTTCTTAGTCTCCAACCTGTAGTTCTCATTTTTTCTGATATTCTATGTTAGTGGATTTAGATAATGAGTACACTTCTGAACTATTCATTTATTATCTTGACTGCAATGGTGTATCTTAGATGAGTGATGTCCGTGATAAGATTGATATCGCACAAGATAACCAAAACTACCATTAAGTTAATAATATTAAAAAGTGTCATGTTCTTTTGTAGCAGCGGACAGGTGCAATGTCCACTATGAAGATAGCCACTCTCATGGATCTTCCTCCTGTGGTGTTAAGTGAACGCTTATTCACAGATGGAAGTAGAGAAGTCTACTATCCAGCTCCTCTGCTAGAGTTATGGATGAGAAGTATCCGTCAACCCCCTGACTCACCTTCTGGTAAGTATTACTATTACCTGTAACTCGATATTTCCATTGAAAATATATATTTTGGGGAAAAGGAAATTTGATCATTTATTTTCTGCAGAGAGGAACTCTGCACCCTTACCTCCTGAGCCATCTCTGTCTTCACTCCCAGAGAGAGTTAACTTTTCAGATCATATGGACTTTGTAAGCCGTTTAACCAACTTTTACAGCTTTATTTTGAATGTTTGACGAATATAATCTTCTCTCTTACATATTCTTTAAATGCAAAATATGAAGTCTTTTGAAGGTCATCAAAGTGGAGTTGGTTCTCAGTCATTTGGAGCTTCCATGGAGAAGCTAATGACCAGACGAGTCAATGATAGTAATCAAGCCGAGATCCCAGAAGAACTCGGACCCAACATCATGGACAATGTTATGAGGATGACTGAAAGAAATCAAGTGGTTACACCTGGAAATTCCGGTCCATTTTCTTCATCTCAACTAAAACATTTAACATTCATTCCATCTCCATAGTAGGAACTTTGAGATGGTCATAGCTTGTTTTACAAAAATATGGTTTATCTATATAAACAGTAAATGGAGTGAGGTCAGTTTCAAGCTCAGCATCTGGACATGGTGACCTATCAAATAATTTAGGGACCAATTCTGTAAGGTTAGTAGTACATAAGCTTCCAGACATTCTCTTTTGAACCCAAAACAAGAATATTTGTTTTGTGTTTAGGACACGATAACACTATGATTGAAGTTTTAATGATCAATAGATCCAACAAGAAAAGACCTTATTCTTCCTCGAGACAAAGTAGTGGAGGCCTCGAACCTGTAGCTGAGGAGAATCCATGGCATCATCACTCTGATCCAAATTTCAAGTTAGCGAGGTTGTCTGAAAATGATCCAGGTAAGTGAAAAAACACTTATTTATAATTAGCCTAATTGATAACTTTGAGCTCATTTCTCTATCTAATTGAACTCTACTCAGTGCTCACTATAATTTATAACTTTCTTTCACAGATTTATTGGAAGAAACTGCCCGAACACAAACTCAAGTCACTCAACCTGCCATCAAGCATCCTCCTGCTGACAAGATAACTGATTCCATTCGAACGTAAGTTCTCTTTTTGTTTTGGTGTGAAGTGTGTGTTTTAGTTGTTTCATCATAGATTGCTAACAAAATCCTTCTCTCCCTCTGAATCTTTTTAATGCTGAAGGCAAATGAAGGCACATTTTGATACGCCAGGAGCCGCATCAACAGAATCTTTAAACAATTTGGCTGCTGGAATGAACCGCAAAGCAGCTGCTATGCTCTTCTATCAGACTTGCGGTATACTTTCTTTCATTTGTGCTTTTGCTTTCCTGTTCTTGTTATCTTTAGAAAGTCCAAAGTCTTTTTGCTTTTTGGTTAAATGATCATTTAATTGATCATTTAACTTCATGCACATGCACCTTCTTGTTATCTTTAGAAAGTCCCAAGCCTCAATTAATCTAAAATGAGTTTATCCTTTGTTTATACAGTTCTAGCTTCAAGTGATTACTTAAAAGTCAACCAACAAGTTCCTTTTGGAGATATTTTCATCTCCAAAGGAACAAAAATGTGACAGAAGTGAGGTCAGTATCTTAAACTTACTAAAGCCACCATCACACACACACACACATATATATACTGCCAATATAATTTTTACTAAAATAGCATTTTATTTTTCATCTATATTTAGAACAAAGAATTATAGGATTTGTATAGCCTTAAATTTGAGAATTGCCAAAGTAGATTAAGAAAAAGCCAGAAACAATACCAATTGTAATTAATTATATAATATCCATTATCCTTGCTTAGCTTGTGCAATGAAATCTATTGCCTCTGCTTTAATTTC

mRNA sequence

AGTAGCTATGGCGCGCACAGTTCGTTAGTTATTAGCCGAAGCCTAACGAAACTCCACTTCGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGGTTCAAGAGTTTCAAGTTCCTTCAGCAGCGAAAAGGAGAGTTTCATCCACAATGTTTTACTCGCATCAGCTTCTAGCACGCAAGGCTCCTCTCGGCCAAATCTGGATGGCTGCAACAATGCACGCGAAGATTAATCGGAGAAAGCTCGACAAGTTGAACATAATCAAAATTTGTGAGGAGATTTTGAATCCTTCGGTACCAATGGCTCTAAGACTCTCGGGGATTCTCATGGGTGGTGTTGTCATTGTCTATGAACGGAAAGTTAAAATTCTTTACGAGGATGTAACTCGTCTCCTGGTTGAGATAAACGAAGCATGGAAGGTGAAAGCAGCTCCAGAGCCCACCGTCATTCCAAAAGGAAAATCTCTTGCCAAGAAGGAGGCTGTTACTAGGCCTGAGAAGGATCCGAAAGACGTTTCCTATAACACCTCTCCAATGAGGTTTCAACAAACTGCATTTTTTACTATGCGGCTTGACAGTGTGGATGAACAATATAACAGTGACAAAACAGTGGAAGATGATCCGTCACAAAACTTCCATCAAACTGATGCTGAAAATATAACCTTAGTCGAGCGTTTTGATATGTATCAATCAAATACAAATACGTTCAATCGGTTTGAAAGATTTGATATTGAAGAGGACGAGGATACACAACCAAATTTTGCATCTGTAGATCAAACACAAATTCCAGCTACTTTCAAAGATTCCCCTCCTCCACAAGACAAGTATCCAGAAGGCCCTCCTGATGCTGAAGTCCAGGACCAACATCTAGAAAGCAACGTTAATCAGCCAGCCTATGAATCCACGGAGCTTAGACAGGTGGAGCAGGTGGCAAGAAAAAGGAAAACAAAAAGAACAGCAGCCTCTTTGATGGACTATGAACAAACCATCATTCCTGGACACATATACCAATGTTGGCTGAAAGATGTCTCTGATCTAATCTCTAGAAGAGGAAGAAAGAGAAAGCAGCGGACAGGTGCAATGTCCACTATGAAGATAGCCACTCTCATGGATCTTCCTCCTGTGGTGTTAAGTGAACGCTTATTCACAGATGGAAGTAGAGAAGTCTACTATCCAGCTCCTCTGCTAGAGTTATGGATGAGAAGTATCCGTCAACCCCCTGACTCACCTTCTGAGAGGAACTCTGCACCCTTACCTCCTGAGCCATCTCTGTCTTCACTCCCAGAGAGAGTTAACTTTTCAGATCATATGGACTTTTCTTTTGAAGGTCATCAAAGTGGAGTTGGTTCTCAGTCATTTGGAGCTTCCATGGAGAAGCTAATGACCAGACGAGTCAATGATAGTAATCAAGCCGAGATCCCAGAAGAACTCGGACCCAACATCATGGACAATGTTATGAGGATGACTGAAAGAAATCAAGTGGTTACACCTGGAAATTCCGTAAATGGAGTGAGGTCAGTTTCAAGCTCAGCATCTGGACATGGTGACCTATCAAATAATTTAGGGACCAATTCTGTAAGATCCAACAAGAAAAGACCTTATTCTTCCTCGAGACAAAGTAGTGGAGGCCTCGAACCTGTAGCTGAGGAGAATCCATGGCATCATCACTCTGATCCAAATTTCAAGTTAGCGAGGTTGTCTGAAAATGATCCAGATTTATTGGAAGAAACTGCCCGAACACAAACTCAAGTCACTCAACCTGCCATCAAGCATCCTCCTGCTGACAAGATAACTGATTCCATTCGAACGCAAATGAAGGCACATTTTGATACGCCAGGAGCCGCATCAACAGAATCTTTAAACAATTTGGCTGCTGGAATGAACCGCAAAGCAGCTGCTATGCTCTTCTATCAGACTTGCGTTCTAGCTTCAAGTGATTACTTAAAAGTCAACCAACAAGTTCCTTTTGGAGATATTTTCATCTCCAAAGGAACAAAAATGTGACAGAAGTGAGGTCAGTATCTTAAACTTACTAAAGCCACCATCACACACACACACACATATATATACTGCCAATATAATTTTTACTAAAATAGCATTTTATTTTTCATCTATATTTAGAACAAAGAATTATAGGATTTGTATAGCCTTAAATTTGAGAATTGCCAAAGTAGATTAAGAAAAAGCCAGAAACAATACCAATTGTAATTAATTATATAATATCCATTATCCTTGCTTAGCTTGTGCAATGAAATCTATTGCCTCTGCTTTAATTTC

Coding sequence (CDS)

ATGTTTTACTCGCATCAGCTTCTAGCACGCAAGGCTCCTCTCGGCCAAATCTGGATGGCTGCAACAATGCACGCGAAGATTAATCGGAGAAAGCTCGACAAGTTGAACATAATCAAAATTTGTGAGGAGATTTTGAATCCTTCGGTACCAATGGCTCTAAGACTCTCGGGGATTCTCATGGGTGGTGTTGTCATTGTCTATGAACGGAAAGTTAAAATTCTTTACGAGGATGTAACTCGTCTCCTGGTTGAGATAAACGAAGCATGGAAGGTGAAAGCAGCTCCAGAGCCCACCGTCATTCCAAAAGGAAAATCTCTTGCCAAGAAGGAGGCTGTTACTAGGCCTGAGAAGGATCCGAAAGACGTTTCCTATAACACCTCTCCAATGAGGTTTCAACAAACTGCATTTTTTACTATGCGGCTTGACAGTGTGGATGAACAATATAACAGTGACAAAACAGTGGAAGATGATCCGTCACAAAACTTCCATCAAACTGATGCTGAAAATATAACCTTAGTCGAGCGTTTTGATATGTATCAATCAAATACAAATACGTTCAATCGGTTTGAAAGATTTGATATTGAAGAGGACGAGGATACACAACCAAATTTTGCATCTGTAGATCAAACACAAATTCCAGCTACTTTCAAAGATTCCCCTCCTCCACAAGACAAGTATCCAGAAGGCCCTCCTGATGCTGAAGTCCAGGACCAACATCTAGAAAGCAACGTTAATCAGCCAGCCTATGAATCCACGGAGCTTAGACAGGTGGAGCAGGTGGCAAGAAAAAGGAAAACAAAAAGAACAGCAGCCTCTTTGATGGACTATGAACAAACCATCATTCCTGGACACATATACCAATGTTGGCTGAAAGATGTCTCTGATCTAATCTCTAGAAGAGGAAGAAAGAGAAAGCAGCGGACAGGTGCAATGTCCACTATGAAGATAGCCACTCTCATGGATCTTCCTCCTGTGGTGTTAAGTGAACGCTTATTCACAGATGGAAGTAGAGAAGTCTACTATCCAGCTCCTCTGCTAGAGTTATGGATGAGAAGTATCCGTCAACCCCCTGACTCACCTTCTGAGAGGAACTCTGCACCCTTACCTCCTGAGCCATCTCTGTCTTCACTCCCAGAGAGAGTTAACTTTTCAGATCATATGGACTTTTCTTTTGAAGGTCATCAAAGTGGAGTTGGTTCTCAGTCATTTGGAGCTTCCATGGAGAAGCTAATGACCAGACGAGTCAATGATAGTAATCAAGCCGAGATCCCAGAAGAACTCGGACCCAACATCATGGACAATGTTATGAGGATGACTGAAAGAAATCAAGTGGTTACACCTGGAAATTCCGTAAATGGAGTGAGGTCAGTTTCAAGCTCAGCATCTGGACATGGTGACCTATCAAATAATTTAGGGACCAATTCTGTAAGATCCAACAAGAAAAGACCTTATTCTTCCTCGAGACAAAGTAGTGGAGGCCTCGAACCTGTAGCTGAGGAGAATCCATGGCATCATCACTCTGATCCAAATTTCAAGTTAGCGAGGTTGTCTGAAAATGATCCAGATTTATTGGAAGAAACTGCCCGAACACAAACTCAAGTCACTCAACCTGCCATCAAGCATCCTCCTGCTGACAAGATAACTGATTCCATTCGAACGCAAATGAAGGCACATTTTGATACGCCAGGAGCCGCATCAACAGAATCTTTAAACAATTTGGCTGCTGGAATGAACCGCAAAGCAGCTGCTATGCTCTTCTATCAGACTTGCGTTCTAGCTTCAAGTGATTACTTAAAAGTCAACCAACAAGTTCCTTTTGGAGATATTTTCATCTCCAAAGGAACAAAAATGTGA

Protein sequence

MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKSLAKKEAVTRPEKDPKDVSYNTSPMRFQQTAFFTMRLDSVDEQYNSDKTVEDDPSQNFHQTDAENITLVERFDMYQSNTNTFNRFERFDIEEDEDTQPNFASVDQTQIPATFKDSPPPQDKYPEGPPDAEVQDQHLESNVNQPAYESTELRQVEQVARKRKTKRTAASLMDYEQTIIPGHIYQCWLKDVSDLISRRGRKRKQRTGAMSTMKIATLMDLPPVVLSERLFTDGSREVYYPAPLLELWMRSIRQPPDSPSERNSAPLPPEPSLSSLPERVNFSDHMDFSFEGHQSGVGSQSFGASMEKLMTRRVNDSNQAEIPEELGPNIMDNVMRMTERNQVVTPGNSVNGVRSVSSSASGHGDLSNNLGTNSVRSNKKRPYSSSRQSSGGLEPVAEENPWHHHSDPNFKLARLSENDPDLLEETARTQTQVTQPAIKHPPADKITDSIRTQMKAHFDTPGAASTESLNNLAAGMNRKAAAMLFYQTCVLASSDYLKVNQQVPFGDIFISKGTKM

Homology

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BLAST of Clc07G04540 vs. NCBI nr
Match: XP_038891624.1 (sister chromatid cohesion 1 protein 1 [Benincasa hispida])

HSP 1 Score: 1040.8 bits (2690), Expect = 4.7e-300
Identity = 559/629 (88.87%), Postives = 574/629 (91.26%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKSLAKKEAVTRPEKDPK 120
           GGVVIVYERKVKILYEDVTRLLVEINEAWK+K APEPTVIPKGKSLAKKEAVT+  KDPK
Sbjct: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKLKEAPEPTVIPKGKSLAKKEAVTK--KDPK 120

Query: 121 D-----VSYNTSPMRFQQTAFFTM------RLDSVDEQYNSDKTVEDDPSQNFHQTDAEN 180
           D     VS+NTSPMRFQQTAFFTM      RLDSVDE Y ++KTVEDDPSQNFHQTDAEN
Sbjct: 121 DVGDHEVSHNTSPMRFQQTAFFTMIFLPLQRLDSVDEPYINEKTVEDDPSQNFHQTDAEN 180

Query: 181 ITLVERFDMYQSNTNTFNRFERFDIEEDEDTQPNFASVDQTQIPATFKDSPPPQDKYPEG 240
           ITLVERFDMYQSNTNT +RFERFDIEEDEDTQPNFASVDQTQIP T + S PPQ+KYPEG
Sbjct: 181 ITLVERFDMYQSNTNTVDRFERFDIEEDEDTQPNFASVDQTQIPDTVRPSSPPQEKYPEG 240

Query: 241 PPDAEVQDQHLESNVNQPAYESTELRQVEQVARKRKTKRTAASLMDYEQTIIPGHIYQCW 300
           PPDAEVQDQHLE NV QPA+ES E RQ EQVARKRKTK TAASLMDYEQTIIPGHIYQ W
Sbjct: 241 PPDAEVQDQHLERNVIQPAHESKEFRQEEQVARKRKTK-TAASLMDYEQTIIPGHIYQSW 300

Query: 301 LKDVSDLISRRGRKRKQRTGAMSTMKIATLMDLPPVVLSERLFTDGSREVYYPAPLLELW 360
           LKDVSDLISRRGRKRKQRTGAM TMKIATLMDLPPVVLSERLFTDGSREVYYPAPLLELW
Sbjct: 301 LKDVSDLISRRGRKRKQRTGAMCTMKIATLMDLPPVVLSERLFTDGSREVYYPAPLLELW 360

Query: 361 MRSIRQPPDSPSERNSAPLPPEPSLSSLPERVNFSDHMDFSFEGHQSGVGSQSFGASMEK 420
           MRSIRQPP SPSERNS   PPEPS SSLPE VNFSDHMDF FE H SGVGSQSFGASMEK
Sbjct: 361 MRSIRQPPYSPSERNSGLSPPEPSHSSLPETVNFSDHMDFPFEDHHSGVGSQSFGASMEK 420

Query: 421 LMTRRVNDSNQAEIP-EELGPNIMDNVMRMTERNQVVTPGNSVNGVRSVSSSASGHGDLS 480
           +M RRV D  QA+IP EELG NIMDNV  MTERNQVVTPGNS NGVRSVSSSAS HG+LS
Sbjct: 421 IMNRRVTDGIQAKIPLEELGLNIMDNVTGMTERNQVVTPGNSGNGVRSVSSSASVHGELS 480

Query: 481 NNLGTNSVRSNKKRPYSSSRQSSGGLEPVAEENPWHHHSDPNFKLARLSENDPDLLEETA 540
           NNL TNSVRSNKKR YSSSR+SSGGLEPVAEENPWHHHSDPNFKLA LSEN+PDLL ETA
Sbjct: 481 NNLETNSVRSNKKRHYSSSRRSSGGLEPVAEENPWHHHSDPNFKLASLSENNPDLLVETA 540

Query: 541 RTQTQVTQPAIKHPPADKITDSIRTQMKAHFDTPGAASTESLNNLAAGMNRKAAAMLFYQ 600
            TQTQVTQPAIKHPPADKITDSIR QMKAHFDTPGAASTESLNNLAAGMNRKAAAMLFYQ
Sbjct: 541 PTQTQVTQPAIKHPPADKITDSIRMQMKAHFDTPGAASTESLNNLAAGMNRKAAAMLFYQ 600

Query: 601 TCVLASSDYLKVNQQVPFGDIFISKGTKM 618
           TCVLASSDYL+VNQQV FGDIFISKGTKM
Sbjct: 601 TCVLASSDYLRVNQQVSFGDIFISKGTKM 626

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BLAST of Clc07G04540 vs. NCBI nr
Match: XP_008454870.1 (PREDICTED: sister chromatid cohesion 1 protein 1 [Cucumis melo])

HSP 1 Score: 1033.1 bits (2670), Expect = 9.8e-298
Identity = 542/618 (87.70%), Postives = 564/618 (91.26%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKSLAKKEAVTRPEKDPK 120
           GGVVIVYERKVKILYEDVTRLL+EINEAWKVKAAPEPT +PKGKSLAKKEAVTRPEKDP 
Sbjct: 61  GGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAVTRPEKDPN 120

Query: 121 DVSYNTSPMRFQQTAFFTMRLDSVDEQYNSDKTVEDDPSQNFHQTDAENITLVERFDMYQ 180
           DVSY+TSPM+FQQTAFF+MRLDSVDE Y +DKTVEDDPSQNFHQTD ENITL+ERFDMYQ
Sbjct: 121 DVSYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDIENITLIERFDMYQ 180

Query: 181 SNTNTFNRFERFDIEEDEDTQPNFASVDQTQIPATFKDSPPPQDKYPEGPPDAEVQDQHL 240
           S T+TF+RFERFDIEE EDTQP+FASVDQTQIPAT + SPPP DKYPEGPPDAEVQDQHL
Sbjct: 181 SKTSTFDRFERFDIEEYEDTQPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHL 240

Query: 241 ESNVNQPAYESTELRQVEQVARKRKTKRTAASLMDYEQTIIPGHIYQCWLKDVSDLISRR 300
           E NV+QPA ES E RQ+EQ ARKRK KRTAASLMDYEQTIIPGH+YQ WLKDVSDLISRR
Sbjct: 241 EHNVDQPAKESKEHRQLEQEARKRKAKRTAASLMDYEQTIIPGHVYQSWLKDVSDLISRR 300

Query: 301 GRKRKQRTGAMSTMKIATLMDLPPVVLSERLFTDGSREVYYPAPLLELWMRSIRQPPDSP 360
            RKRKQRTG M T KI TLMDLPPVVLSERLFT+GSRE YYPAPLLELWMRSIRQ PDSP
Sbjct: 301 RRKRKQRTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSP 360

Query: 361 SERNSAPLPPEPSLSSLPERVNFSDHMDFSFEGHQSGVGSQSFGASMEKLMTRRVNDSNQ 420
           SERNS P PPEPS+SS  ERVNFSDH DF FE H SGVGSQSFG SMEKLMT +VND   
Sbjct: 361 SERNSTPFPPEPSVSSRRERVNFSDHTDFPFEDHYSGVGSQSFGGSMEKLMTGQVNDG-- 420

Query: 421 AEIP-EELGPNIMDNVMRMTERNQVVTPGNSVNGVRSVSSSASGHGDLSNNLGTNSVRSN 480
           AEIP EELGPNIMDNVM M ERNQ+ TPGNS  GVRSVSSSAS H  LS N GT+SVR N
Sbjct: 421 AEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSVRFN 480

Query: 481 KKRPYSSSRQSSGGLEPVAEENPWHHHSDPNFKLARLSENDPDLLEETARTQTQVTQPAI 540
           KKRPYSSS++SSGGLEPVAEENPW HHSDPNFKLARLSENDPDLLEETA TQTQV+Q A 
Sbjct: 481 KKRPYSSSKRSSGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQVSQAAF 540

Query: 541 KHPPADKITDSIRTQMKAHFDTPGAASTESLNNLAAGMNRKAAAMLFYQTCVLASSDYLK 600
           KHPPADKITDSIR QMKAHFDTPGAASTESLNNLAAGMNRKAAAMLFYQTCVLASSDYLK
Sbjct: 541 KHPPADKITDSIRMQMKAHFDTPGAASTESLNNLAAGMNRKAAAMLFYQTCVLASSDYLK 600

Query: 601 VNQQVPFGDIFISKGTKM 618
           VNQQVPFGDIFISKGTKM
Sbjct: 601 VNQQVPFGDIFISKGTKM 616

[Close]

BLAST of Clc07G04540 vs. NCBI nr
Match: XP_031742082.1 (sister chromatid cohesion 1 protein 1 [Cucumis sativus])

HSP 1 Score: 1031.2 bits (2665), Expect = 3.7e-297
Identity = 540/618 (87.38%), Postives = 567/618 (91.75%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSH LLARKAPLGQIWMAATMHAKINRRKLD LNIIKICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHHLLARKAPLGQIWMAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKSLAKKEAVTRPEKDPK 120
           GGVVIVYERKVKILYEDVTRLL+EINEAWKVKAAPEPT +PKGKSLAKKEA+TRPEKDP 
Sbjct: 61  GGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKDPN 120

Query: 121 DVSYNTSPMRFQQTAFFTMRLDSVDEQYNSDKTVEDDPSQNFHQTDAENITLVERFDMYQ 180
           D+SYNTSPM+FQQTAFF+MRLDSVDE Y +DKTVEDDPSQNFHQTDAENITL+ERFDMYQ
Sbjct: 121 DISYNTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQ 180

Query: 181 SNTNTFNRFERFDIEEDEDTQPNFASVDQTQIPATFKDSPPPQDKYPEGPPDAEVQDQHL 240
           S T+TF+RFERFDIEED DTQP+FASVDQTQIPAT +  PPP DKYPEGPPDAEVQDQHL
Sbjct: 181 SKTSTFDRFERFDIEEDGDTQPDFASVDQTQIPATVRPPPPPPDKYPEGPPDAEVQDQHL 240

Query: 241 ESNVNQPAYESTELRQVEQVARKRKTKRTAASLMDYEQTIIPGHIYQCWLKDVSDLISRR 300
           E  V+QPA ES ELRQVEQVARKRK KRTAASLMDYEQTIIPGHIYQ WLKDVSDLISRR
Sbjct: 241 EHIVDQPAEESKELRQVEQVARKRKAKRTAASLMDYEQTIIPGHIYQSWLKDVSDLISRR 300

Query: 301 GRKRKQRTGAMSTMKIATLMDLPPVVLSERLFTDGSREVYYPAPLLELWMRSIRQPPDSP 360
            RKRKQRTG M T KIATLMDLPPVVLSERLFT+GSRE YYPAPLLELWMRSIRQPPDSP
Sbjct: 301 RRKRKQRTGPMFTKKIATLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQPPDSP 360

Query: 361 SERNSAPLPPEPSLSSLPERVNFSDHMDFSFEGHQSGVGSQSFGASMEKLMTRRVNDSNQ 420
           SER+S PLPPEPS+ S PERVNFS+HM+F FE H SGVGSQSFG+SMEKLMT +VN    
Sbjct: 361 SERSSTPLPPEPSVFSPPERVNFSEHMNFPFEDHYSGVGSQSFGSSMEKLMTGQVNGG-- 420

Query: 421 AEIP-EELGPNIMDNVMRMTERNQVVTPGNSVNGVRSVSSSASGHGDLSNNLGTNSVRSN 480
           AEIP EELGPNIMDNVM M ERNQ+ TPGNS  GVRSVSSSAS H  LS N GT+S+R N
Sbjct: 421 AEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSLRFN 480

Query: 481 KKRPYSSSRQSSGGLEPVAEENPWHHHSDPNFKLARLSENDPDLLEETARTQTQVTQPAI 540
           KKR YSSS++SSGGLEPVAEENPW HHSDPNFKLARLSENDPDLLEETA TQTQ+TQ AI
Sbjct: 481 KKRSYSSSKRSSGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQLTQAAI 540

Query: 541 KHPPADKITDSIRTQMKAHFDTPGAASTESLNNLAAGMNRKAAAMLFYQTCVLASSDYLK 600
           K+PPADKITDSIR QMKAHFDTPGAASTESLNNLAAGMNRKAAAMLFYQTCVLASSDYLK
Sbjct: 541 KYPPADKITDSIRMQMKAHFDTPGAASTESLNNLAAGMNRKAAAMLFYQTCVLASSDYLK 600

Query: 601 VNQQVPFGDIFISKGTKM 618
           VNQQVPFGDIFISKGTKM
Sbjct: 601 VNQQVPFGDIFISKGTKM 616

[Close]

BLAST of Clc07G04540 vs. NCBI nr
Match: XP_023552287.1 (sister chromatid cohesion 1 protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1012.3 bits (2616), Expect = 1.8e-291
Identity = 544/628 (86.62%), Postives = 566/628 (90.13%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKSLAKKEAVTRPEKDPK 120
           GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKS+AKKEAVTRP+KDPK
Sbjct: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKSVAKKEAVTRPKKDPK 120

Query: 121 DV----------SYNTSPMRFQQTAFFTMRLDSVDEQYNSDKTVEDDPSQNFHQTDAENI 180
           DV          SYNTSPM+FQQTAFFTMRLDSVDE Y  +KTVEDD S NFHQTDAENI
Sbjct: 121 DVGDHEAQSINFSYNTSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENI 180

Query: 181 TLVERFDMYQSNTNTFNRFERFDIEEDEDTQPNFASVDQTQIPATFKDSPPPQDKYPEGP 240
           TL+ERFDMYQSNTNTFNRFERFDIE+DEDTQPNFASVDQT+IP TF  S PPQDK+ EGP
Sbjct: 181 TLLERFDMYQSNTNTFNRFERFDIEDDEDTQPNFASVDQTKIPDTFGPS-PPQDKHQEGP 240

Query: 241 PDAEVQDQHLESNVNQPAYESTELRQVEQVARKRKTKRTAASLMDYEQTIIPGHIYQCWL 300
           PDAEVQDQHLE +V Q AYES ELRQ EQVA KRKTKRTAA LMDYE+TIIPGHIYQ WL
Sbjct: 241 PDAEVQDQHLERDVIQQAYESKELRQEEQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWL 300

Query: 301 KDVSDLISRRGRKRKQRTGAMSTMKIATLMDLPPVVLSERLFTDGSREVYYPAPLLELWM 360
           KDVSDLISRRG+KRK RTGAMS+MKIATLMDLPPVVLS RLFTDGSREVYYPAPLLELWM
Sbjct: 301 KDVSDLISRRGKKRK-RTGAMSSMKIATLMDLPPVVLSGRLFTDGSREVYYPAPLLELWM 360

Query: 361 RSIRQPPDSPSERNSAPLPPEPSLSSLPERVNFSDHMDFSFEGHQSGVGSQSFGASMEKL 420
           +SIR PPDSPS RNSAPLPPEPSLSSLPERVNF DHMDF++E H SGVGSQSFGAS+EKL
Sbjct: 361 KSIRDPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYENHYSGVGSQSFGASIEKL 420

Query: 421 MTRRVNDSNQAEI-PEELGPNIMDNVMRMTERNQVVTPGNSVNGVRSVSSSASGHGDLSN 480
            T+ VND   AEI  EEL P+ M+NVM M ERNQVVTPGNS  GVRSVSSSAS HG   +
Sbjct: 421 RTKPVNDDIHAEILLEELRPDFMNNVMGMAERNQVVTPGNSGIGVRSVSSSASEHGVFVS 480

Query: 481 NLGTNSVRSNKKRPYSSSRQSSGGLEPVAEENPWHHHSDPNFKLARLSENDPDLLEETAR 540
           N  TNSVRSNKKRPYSSSRQSSGGLEPVAEENPW HHSDPNFKLARLSENDPDLL ETA 
Sbjct: 481 NPETNSVRSNKKRPYSSSRQSSGGLEPVAEENPW-HHSDPNFKLARLSENDPDLLVETAP 540

Query: 541 TQTQVTQPAIKHPPADKITDSIRTQMKAHFDTPGAASTESLNNLAAGMNRKAAAMLFYQT 600
           TQTQVTQPAIKHPPADKIT+SIR QMKAHFDTPGA   ESLNNLAAGMN KAAAMLFYQT
Sbjct: 541 TQTQVTQPAIKHPPADKITNSIRMQMKAHFDTPGAPPAESLNNLAAGMNPKAAAMLFYQT 600

Query: 601 CVLASSDYLKVNQQVPFGDIFISKGTKM 618
           CVLASSDYLKVNQQ+PFGDIFISKGTKM
Sbjct: 601 CVLASSDYLKVNQQIPFGDIFISKGTKM 625

[Close]

BLAST of Clc07G04540 vs. NCBI nr
Match: XP_022957007.1 (sister chromatid cohesion 1 protein 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 998.8 bits (2581), Expect = 2.0e-287
Identity = 539/628 (85.83%), Postives = 560/628 (89.17%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKSLAKKEAVTRPEKDPK 120
           GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKS+AKKEAVTRP+KDPK
Sbjct: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKSVAKKEAVTRPKKDPK 120

Query: 121 DV----------SYNTSPMRFQQTAFFTMRLDSVDEQYNSDKTVEDDPSQNFHQTDAENI 180
           DV          SYNTSPM+FQQTAFFTMRLDSVDE Y  +KTVEDD S NFHQTDAENI
Sbjct: 121 DVGDHEAQSINFSYNTSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENI 180

Query: 181 TLVERFDMYQSNTNTFNRFERFDIEEDEDTQPNFASVDQTQIPATFKDSPPPQDKYPEGP 240
           TL+ERFDMYQSNTN FNRFERFDIE+DEDTQPNFASVDQT+IP TF  S PPQDKY EGP
Sbjct: 181 TLLERFDMYQSNTNAFNRFERFDIEDDEDTQPNFASVDQTKIPDTFGTS-PPQDKYQEGP 240

Query: 241 PDAEVQDQHLESNVNQPAYESTELRQVEQVARKRKTKRTAASLMDYEQTIIPGHIYQCWL 300
           PDAEVQDQHLE +V Q AY S E RQ EQVA KRKTKRTAA LMDYE+TIIPGHIYQ WL
Sbjct: 241 PDAEVQDQHLERDVIQQAYVSKEHRQEEQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWL 300

Query: 301 KDVSDLISRRGRKRKQRTGAMSTMKIATLMDLPPVVLSERLFTDGSREVYYPAPLLELWM 360
           KDVSDLISRRG+KRK RTGAMS+MKIATLMDLPPVVL  RLFTDGSREVYYPAPLLELWM
Sbjct: 301 KDVSDLISRRGKKRK-RTGAMSSMKIATLMDLPPVVLCGRLFTDGSREVYYPAPLLELWM 360

Query: 361 RSIRQPPDSPSERNSAPLPPEPSLSSLPERVNFSDHMDFSFEGHQSGVGSQSFGASMEKL 420
           +SIR PPDSPS RNSAPLPPEPSLSSLPERVNF DHMDF++E   SGVGSQSFGAS+EKL
Sbjct: 361 KSIRDPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYENRYSGVGSQSFGASIEKL 420

Query: 421 MTRRVNDSNQAEI-PEELGPNIMDNVMRMTERNQVVTPGNSVNGVRSVSSSASGHGDLSN 480
            T+ VND   AEI  EEL P+  +N+M M ERNQVVTPGNS  GVRSVSSSAS HG   +
Sbjct: 421 RTKPVNDDIHAEILLEELRPDFRNNLMGMAERNQVVTPGNSGIGVRSVSSSASEHGVFVS 480

Query: 481 NLGTNSVRSNKKRPYSSSRQSSGGLEPVAEENPWHHHSDPNFKLARLSENDPDLLEETAR 540
           N  TNSVRSNKKRPYSSSRQSSGGLEPVAEENPW HHSDPNFKLARLSENDPDLL ETA 
Sbjct: 481 NPETNSVRSNKKRPYSSSRQSSGGLEPVAEENPW-HHSDPNFKLARLSENDPDLLVETAP 540

Query: 541 TQTQVTQPAIKHPPADKITDSIRTQMKAHFDTPGAASTESLNNLAAGMNRKAAAMLFYQT 600
           TQTQVTQPAIKHPPADKIT+SIR QMKAHFDTPGA   ESLNNLAAGMN KAAAMLFYQT
Sbjct: 541 TQTQVTQPAIKHPPADKITNSIRMQMKAHFDTPGAPPAESLNNLAAGMNPKAAAMLFYQT 600

Query: 601 CVLASSDYLKVNQQVPFGDIFISKGTKM 618
           CVLASSDYLKVNQQVPFGDIFISKGTKM
Sbjct: 601 CVLASSDYLKVNQQVPFGDIFISKGTKM 625

[Close]

BLAST of Clc07G04540 vs. ExPASy Swiss-Prot
Match: Q9S7T7 (Sister chromatid cohesion 1 protein 1 OS=Arabidopsis thaliana OX=3702 GN=SYN1 PE=2 SV=2)

HSP 1 Score: 424.1 bits (1089), Expect = 2.7e-117
Identity = 288/634 (45.43%), Postives = 372/634 (58.68%), Query Frame = 0


Query: 7   LLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIV 66
           LLARKAPLGQIWMAAT+HAKINR+KLDKL+II+ICEEILNPSVPMALRLSGILMGGVVIV
Sbjct: 17  LLARKAPLGQIWMAATLHAKINRKKLDKLDIIQICEEILNPSVPMALRLSGILMGGVVIV 76

Query: 67  YERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKSLAKKEAVTRPEKDPKD----- 126
           YERKVK+L++DV R LVEIN AW+ K+ P+PT++PKGK+ A+KEAVT PE +  D     
Sbjct: 77  YERKVKLLFDDVNRFLVEINGAWRTKSVPDPTLLPKGKTHARKEAVTLPENEEADFGDFE 136

Query: 127 ----VSYNTSPMRFQQTAFFTMRLDSVDEQYNSDKTVEDDPSQNFHQTDAENITLVERFD 186
               V    + M FQQT F +MRL   DE + ++    +D  Q FHQ DAENITL E   
Sbjct: 137 QTRNVPKFGNYMDFQQT-FISMRL---DESHVNNNPEPEDLGQQFHQADAENITLFEYHG 196

Query: 187 MYQSNTNTFNRFERFDIEEDEDTQPNFASVDQTQIPATFKDSPPPQDKYPEGPPDAEVQD 246
            +Q+N  T++RFERFDIE D++TQ N    +  +IP T   SPP     PEG      Q 
Sbjct: 197 SFQTNNETYDRFERFDIEGDDETQMNSNPREGAEIPTTLIPSPPRHHDIPEGVNPTSPQR 256

Query: 247 QHLESNVNQPAYESTELRQV---EQVAR----KRKTKRTAASLMDYEQTIIPGHIYQCWL 306
           Q  + N      E  E + +   E+  R    K++ ++TA S MDYEQTII GH+YQ WL
Sbjct: 257 QEQQENRRDGFAEQMEEQNIPDKEEHDRPQPAKKRARKTATSAMDYEQTIIAGHVYQSWL 316

Query: 307 KDVSDLISRRGRKRKQRTGAMSTMKIATLMDLPPVVLSERLFTDGSREVYYPAPLLELWM 366
           +D SD++  RG KRK R      M+     ++PP  L E+   D S    YP  L +LW 
Sbjct: 317 QDTSDILC-RGEKRKVRGTIRPDMESFKRANMPPTQLFEK---DSS----YPPQLYQLWS 376

Query: 367 RSIRQPPDSPSERNSAPLPPEPSLSSLPERVNFSDHMDFSFEGHQSGVGSQSFGASMEKL 426
           ++ +    S SE     L  E S   + ER++     D      +S   SQ+  +  E L
Sbjct: 377 KNTQVLQTSSSESRHPDLRAEQSPGFVQERMHNHHQTD---HHERSDTSSQNLDSPAEIL 436

Query: 427 MTRRVNDSNQAEIPEELGPNIMDNVMRMTERNQVVTPGNSVNGVRSVSSSASGHGDLSNN 486
            T R       E     G       +     +  VTP  S + VRS+ S+ S  G  S N
Sbjct: 437 RTVRTGKGASVE-SMMAGSRASPETINRQAADINVTPFYSGDDVRSMPSTPSARGAASIN 496

Query: 487 ---LGTNSVRSNKKRPYSSSRQSSGGLEPVAEENPWHHHSDPNFKLARLSEN----DPDL 546
              + + S   N+KRP SS R+   GLEPVAEE PW H  +  F+ + L E     D ++
Sbjct: 497 NIEISSKSRMPNRKRPNSSPRR---GLEPVAEERPWEHR-EYEFEFSMLPEKRFTADKEI 556

Query: 547 LEETARTQTQVTQPAIKHPPADKITDSIRTQMKAHFDTPGAASTESLNNLAAGMNRKAAA 606
           L ETA TQ   TQ  + +   + ITDSI++ +K HF+TPGA   ESLN LA GM+R AAA
Sbjct: 557 LFETASTQ---TQKPVCNQSDEMITDSIKSHLKTHFETPGAPQVESLNKLAVGMDRNAAA 616

Query: 607 MLFYQTCVLASSDYLKVNQQVPFGDIFISKGTKM 618
            LF+Q+CVLA+   +KVNQ  P+GDI I++G  M
Sbjct: 617 KLFFQSCVLATRGVIKVNQAEPYGDILIARGPNM 627

[Close]

BLAST of Clc07G04540 vs. ExPASy Swiss-Prot
Match: Q9FQ19 (Sister chromatid cohesion 1 protein 3 OS=Arabidopsis thaliana OX=3702 GN=SYN3 PE=2 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 4.3e-14
Identity = 53/135 (39.26%), Postives = 72/135 (53.33%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSH LLARK PLG +W AA +H ++ + +   +NI    + I+ P VP+ALR S  L+
Sbjct: 1   MFYSHTLLARKGPLGTVWCAAHVHQRLKKSQYTSINIPDTVDNIMFPEVPLALRTSSHLL 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTV-IPKGKSLAKKEAVTRPEK-- 120
            GVV +Y +KV  LY D   L       W  KA     V +P+    A  E+VT P+   
Sbjct: 61  VGVVRIYSKKVDYLYNDWNLL-----NTWVAKAFVSTQVNLPEDARQAPPESVTLPQALN 120

Query: 121 -DPKDVSYNTSPMRF 132
            D  D+  +T  M F
Sbjct: 121 LDEFDLEDDTLDMEF 130

[Close]

BLAST of Clc07G04540 vs. ExPASy Swiss-Prot
Match: Q8W1Y0 (Sister chromatid cohesion 1 protein 4 OS=Arabidopsis thaliana OX=3702 GN=SYN4 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 6.3e-13
Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYS  +LA+K PLG IW+AA +  K+ + ++   +I    + IL P  P+ALRLS  L+
Sbjct: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEAPIALRLSSHLL 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKSLAKKEAVTRPE 117
            GVV +Y RKV  L++D +  L+++ +A++  A      +P  +S A   ++T PE
Sbjct: 61  LGVVRIYSRKVNYLFDDCSEALLKVKQAFRSAAVD----LPPEESTAPYHSITLPE 112

[Close]

BLAST of Clc07G04540 vs. ExPASy Swiss-Prot
Match: Q6TEL1 (Double-strand-break repair protein rad21 homolog A OS=Danio rerio OX=7955 GN=rad21a PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.0e-11
Identity = 42/117 (35.90%), Postives = 66/117 (56.41%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFY+H +L+++ PL +IW+AA    K+ +  + + N+    E I++P V MALR SG L+
Sbjct: 1   MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKSLAKKEAVTRPEK 118
            GVV +Y RK K L  D     ++I  A++    P    +P+    A   A+T PE+
Sbjct: 61  LGVVRIYHRKAKYLLADCNEAFIKIKMAFR----PGVVDLPEDNREAAYNAITLPEE 113

[Close]

BLAST of Clc07G04540 vs. ExPASy Swiss-Prot
Match: Q3SWX9 (Double-strand-break repair protein rad21 homolog OS=Bos taurus OX=9913 GN=RAD21 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 2.6e-11
Identity = 42/117 (35.90%), Postives = 66/117 (56.41%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFY+H +L+++ PL +IW+AA    K+ +  + + N+    E I++P V MALR SG L+
Sbjct: 1   MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKSLAKKEAVTRPEK 118
            GVV +Y RK K L  D     ++I  A++    P    +P+    A   A+T PE+
Sbjct: 61  LGVVRIYHRKAKYLLADCNEAFIKIKMAFR----PGVVDLPEENREAAYNAITLPEE 113

[Close]

BLAST of Clc07G04540 vs. ExPASy TrEMBL
Match: A0A1S3BZ41 (sister chromatid cohesion 1 protein 1 OS=Cucumis melo OX=3656 GN=LOC103495180 PE=3 SV=1)

HSP 1 Score: 1033.1 bits (2670), Expect = 4.7e-298
Identity = 542/618 (87.70%), Postives = 564/618 (91.26%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKSLAKKEAVTRPEKDPK 120
           GGVVIVYERKVKILYEDVTRLL+EINEAWKVKAAPEPT +PKGKSLAKKEAVTRPEKDP 
Sbjct: 61  GGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAVTRPEKDPN 120

Query: 121 DVSYNTSPMRFQQTAFFTMRLDSVDEQYNSDKTVEDDPSQNFHQTDAENITLVERFDMYQ 180
           DVSY+TSPM+FQQTAFF+MRLDSVDE Y +DKTVEDDPSQNFHQTD ENITL+ERFDMYQ
Sbjct: 121 DVSYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDIENITLIERFDMYQ 180

Query: 181 SNTNTFNRFERFDIEEDEDTQPNFASVDQTQIPATFKDSPPPQDKYPEGPPDAEVQDQHL 240
           S T+TF+RFERFDIEE EDTQP+FASVDQTQIPAT + SPPP DKYPEGPPDAEVQDQHL
Sbjct: 181 SKTSTFDRFERFDIEEYEDTQPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHL 240

Query: 241 ESNVNQPAYESTELRQVEQVARKRKTKRTAASLMDYEQTIIPGHIYQCWLKDVSDLISRR 300
           E NV+QPA ES E RQ+EQ ARKRK KRTAASLMDYEQTIIPGH+YQ WLKDVSDLISRR
Sbjct: 241 EHNVDQPAKESKEHRQLEQEARKRKAKRTAASLMDYEQTIIPGHVYQSWLKDVSDLISRR 300

Query: 301 GRKRKQRTGAMSTMKIATLMDLPPVVLSERLFTDGSREVYYPAPLLELWMRSIRQPPDSP 360
            RKRKQRTG M T KI TLMDLPPVVLSERLFT+GSRE YYPAPLLELWMRSIRQ PDSP
Sbjct: 301 RRKRKQRTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSP 360

Query: 361 SERNSAPLPPEPSLSSLPERVNFSDHMDFSFEGHQSGVGSQSFGASMEKLMTRRVNDSNQ 420
           SERNS P PPEPS+SS  ERVNFSDH DF FE H SGVGSQSFG SMEKLMT +VND   
Sbjct: 361 SERNSTPFPPEPSVSSRRERVNFSDHTDFPFEDHYSGVGSQSFGGSMEKLMTGQVNDG-- 420

Query: 421 AEIP-EELGPNIMDNVMRMTERNQVVTPGNSVNGVRSVSSSASGHGDLSNNLGTNSVRSN 480
           AEIP EELGPNIMDNVM M ERNQ+ TPGNS  GVRSVSSSAS H  LS N GT+SVR N
Sbjct: 421 AEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSVRFN 480

Query: 481 KKRPYSSSRQSSGGLEPVAEENPWHHHSDPNFKLARLSENDPDLLEETARTQTQVTQPAI 540
           KKRPYSSS++SSGGLEPVAEENPW HHSDPNFKLARLSENDPDLLEETA TQTQV+Q A 
Sbjct: 481 KKRPYSSSKRSSGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQVSQAAF 540

Query: 541 KHPPADKITDSIRTQMKAHFDTPGAASTESLNNLAAGMNRKAAAMLFYQTCVLASSDYLK 600
           KHPPADKITDSIR QMKAHFDTPGAASTESLNNLAAGMNRKAAAMLFYQTCVLASSDYLK
Sbjct: 541 KHPPADKITDSIRMQMKAHFDTPGAASTESLNNLAAGMNRKAAAMLFYQTCVLASSDYLK 600

Query: 601 VNQQVPFGDIFISKGTKM 618
           VNQQVPFGDIFISKGTKM
Sbjct: 601 VNQQVPFGDIFISKGTKM 616

[Close]

BLAST of Clc07G04540 vs. ExPASy TrEMBL
Match: A0A6J1GXZ1 (sister chromatid cohesion 1 protein 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458512 PE=3 SV=1)

HSP 1 Score: 998.8 bits (2581), Expect = 9.9e-288
Identity = 539/628 (85.83%), Postives = 560/628 (89.17%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKSLAKKEAVTRPEKDPK 120
           GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKS+AKKEAVTRP+KDPK
Sbjct: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKSVAKKEAVTRPKKDPK 120

Query: 121 DV----------SYNTSPMRFQQTAFFTMRLDSVDEQYNSDKTVEDDPSQNFHQTDAENI 180
           DV          SYNTSPM+FQQTAFFTMRLDSVDE Y  +KTVEDD S NFHQTDAENI
Sbjct: 121 DVGDHEAQSINFSYNTSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENI 180

Query: 181 TLVERFDMYQSNTNTFNRFERFDIEEDEDTQPNFASVDQTQIPATFKDSPPPQDKYPEGP 240
           TL+ERFDMYQSNTN FNRFERFDIE+DEDTQPNFASVDQT+IP TF  S PPQDKY EGP
Sbjct: 181 TLLERFDMYQSNTNAFNRFERFDIEDDEDTQPNFASVDQTKIPDTFGTS-PPQDKYQEGP 240

Query: 241 PDAEVQDQHLESNVNQPAYESTELRQVEQVARKRKTKRTAASLMDYEQTIIPGHIYQCWL 300
           PDAEVQDQHLE +V Q AY S E RQ EQVA KRKTKRTAA LMDYE+TIIPGHIYQ WL
Sbjct: 241 PDAEVQDQHLERDVIQQAYVSKEHRQEEQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWL 300

Query: 301 KDVSDLISRRGRKRKQRTGAMSTMKIATLMDLPPVVLSERLFTDGSREVYYPAPLLELWM 360
           KDVSDLISRRG+KRK RTGAMS+MKIATLMDLPPVVL  RLFTDGSREVYYPAPLLELWM
Sbjct: 301 KDVSDLISRRGKKRK-RTGAMSSMKIATLMDLPPVVLCGRLFTDGSREVYYPAPLLELWM 360

Query: 361 RSIRQPPDSPSERNSAPLPPEPSLSSLPERVNFSDHMDFSFEGHQSGVGSQSFGASMEKL 420
           +SIR PPDSPS RNSAPLPPEPSLSSLPERVNF DHMDF++E   SGVGSQSFGAS+EKL
Sbjct: 361 KSIRDPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYENRYSGVGSQSFGASIEKL 420

Query: 421 MTRRVNDSNQAEI-PEELGPNIMDNVMRMTERNQVVTPGNSVNGVRSVSSSASGHGDLSN 480
            T+ VND   AEI  EEL P+  +N+M M ERNQVVTPGNS  GVRSVSSSAS HG   +
Sbjct: 421 RTKPVNDDIHAEILLEELRPDFRNNLMGMAERNQVVTPGNSGIGVRSVSSSASEHGVFVS 480

Query: 481 NLGTNSVRSNKKRPYSSSRQSSGGLEPVAEENPWHHHSDPNFKLARLSENDPDLLEETAR 540
           N  TNSVRSNKKRPYSSSRQSSGGLEPVAEENPW HHSDPNFKLARLSENDPDLL ETA 
Sbjct: 481 NPETNSVRSNKKRPYSSSRQSSGGLEPVAEENPW-HHSDPNFKLARLSENDPDLLVETAP 540

Query: 541 TQTQVTQPAIKHPPADKITDSIRTQMKAHFDTPGAASTESLNNLAAGMNRKAAAMLFYQT 600
           TQTQVTQPAIKHPPADKIT+SIR QMKAHFDTPGA   ESLNNLAAGMN KAAAMLFYQT
Sbjct: 541 TQTQVTQPAIKHPPADKITNSIRMQMKAHFDTPGAPPAESLNNLAAGMNPKAAAMLFYQT 600

Query: 601 CVLASSDYLKVNQQVPFGDIFISKGTKM 618
           CVLASSDYLKVNQQVPFGDIFISKGTKM
Sbjct: 601 CVLASSDYLKVNQQVPFGDIFISKGTKM 625

[Close]

BLAST of Clc07G04540 vs. ExPASy TrEMBL
Match: A0A6J1JET8 (sister chromatid cohesion 1 protein 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483772 PE=3 SV=1)

HSP 1 Score: 991.5 bits (2562), Expect = 1.6e-285
Identity = 537/628 (85.51%), Postives = 560/628 (89.17%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKSLAKKEAVTRPEKDPK 120
           GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPE TVIPKGKS+AKKEA TRP+KDPK
Sbjct: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKKDPK 120

Query: 121 DV----------SYNTSPMRFQQTAFFTMRLDSVDEQYNSDKTVEDDPSQNFHQTDAENI 180
           DV          SY+TSPM+FQQTAFFTMRLDSVDE Y  +KTVEDD S NFHQTDAENI
Sbjct: 121 DVGDHEAQSINFSYDTSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENI 180

Query: 181 TLVERFDMYQSNTNTFNRFERFDIEEDEDTQPNFASVDQTQIPATFKDSPPPQDKYPEGP 240
           TL+ERFDMYQSNTNTFNRFERFDIE+DEDTQ NFASVDQT+IP TF  S PPQDKY EG 
Sbjct: 181 TLLERFDMYQSNTNTFNRFERFDIEDDEDTQSNFASVDQTKIPDTFGPS-PPQDKYQEGS 240

Query: 241 PDAEVQDQHLESNVNQPAYESTELRQVEQVARKRKTKRTAASLMDYEQTIIPGHIYQCWL 300
           P+AEVQDQHLE +V Q AYES ELRQVEQVA KRKTKRTAA LMDYE+TIIPGHIYQ WL
Sbjct: 241 PEAEVQDQHLERDVIQQAYESKELRQVEQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWL 300

Query: 301 KDVSDLISRRGRKRKQRTGAMSTMKIATLMDLPPVVLSERLFTDGSREVYYPAPLLELWM 360
           KDVSDLISRRG+KRK RTGAMS+MKIATLMDLPPVVLS RLFTDGSREVYYPAPLLELWM
Sbjct: 301 KDVSDLISRRGKKRK-RTGAMSSMKIATLMDLPPVVLSGRLFTDGSREVYYPAPLLELWM 360

Query: 361 RSIRQPPDSPSERNSAPLPPEPSLSSLPERVNFSDHMDFSFEGHQSGVGSQSFGASMEKL 420
           +SIR PPDSPS RNSAPLPPEPSLSSLPERVNF DHMDF++E   SGVGSQSFGAS+EKL
Sbjct: 361 KSIRNPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYENQYSGVGSQSFGASIEKL 420

Query: 421 MTRRVNDSNQAEI-PEELGPNIMDNVMRMTERNQVVTPGNSVNGVRSVSSSASGHGDLSN 480
            T+ VND   AEI  EEL P+ M+NVM M ERNQVVTPGNS  GVRSVSSSAS HG    
Sbjct: 421 RTKPVNDDIHAEILLEELRPDFMNNVMGMAERNQVVTPGNSGIGVRSVSSSASEHGVFVY 480

Query: 481 NLGTNSVRSNKKRPYSSSRQSSGGLEPVAEENPWHHHSDPNFKLARLSENDPDLLEETAR 540
           N  TNSVRSNKKRPY SSRQSSGGLEPVAEENPW HHSDPNFKLARLSENDPDLL ETA 
Sbjct: 481 NPETNSVRSNKKRPYYSSRQSSGGLEPVAEENPW-HHSDPNFKLARLSENDPDLLVETAP 540

Query: 541 TQTQVTQPAIKHPPADKITDSIRTQMKAHFDTPGAASTESLNNLAAGMNRKAAAMLFYQT 600
           TQTQVTQPAIK+PPADKIT+SIR QMKAHF+TPGA   ESLNNLAAGMN KAAAMLFYQT
Sbjct: 541 TQTQVTQPAIKNPPADKITNSIRMQMKAHFNTPGAPPAESLNNLAAGMNPKAAAMLFYQT 600

Query: 601 CVLASSDYLKVNQQVPFGDIFISKGTKM 618
           CVLASSDYLKVNQQVPFGDIFISKGTKM
Sbjct: 601 CVLASSDYLKVNQQVPFGDIFISKGTKM 625

[Close]

BLAST of Clc07G04540 vs. ExPASy TrEMBL
Match: A0A5D3E364 (Sister chromatid cohesion 1 protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold344G00900 PE=4 SV=1)

HSP 1 Score: 973.8 bits (2516), Expect = 3.4e-280
Identity = 514/591 (86.97%), Postives = 536/591 (90.69%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKSLAKKEAVTRPEKDPK 120
           GGVVIVYERKVKILYEDVTRLL+EINEAWKVKAAPEPT +PKGKSLAKKEAVTRPEKDP 
Sbjct: 61  GGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAVTRPEKDPN 120

Query: 121 DVSYNTSPMRFQQTAFFTMRLDSVDEQYNSDKTVEDDPSQNFHQTDAENITLVERFDMYQ 180
           DVSY+TSPM+FQQTAFF+MRLDSVDE Y +DKTVEDDPSQNFHQTD ENITL+ERFDMYQ
Sbjct: 121 DVSYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDIENITLIERFDMYQ 180

Query: 181 SNTNTFNRFERFDIEEDEDTQPNFASVDQTQIPATFKDSPPPQDKYPEGPPDAEVQDQHL 240
           S T+TF+RFERFDIEE EDTQP+FASVDQTQIPAT + SPPP DKYPEGPPDAEVQDQHL
Sbjct: 181 SKTSTFDRFERFDIEEYEDTQPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHL 240

Query: 241 ESNVNQPAYESTELRQVEQVARKRKTKRTAASLMDYEQTIIPGHIYQCWLKDVSDLISRR 300
           E NV+QPA ES E RQ+EQ ARKRK KRTAASLMDYEQTIIPGH+YQ WLKDVSDLISRR
Sbjct: 241 EHNVDQPAKESKEHRQLEQEARKRKAKRTAASLMDYEQTIIPGHVYQSWLKDVSDLISRR 300

Query: 301 GRKRKQRTGAMSTMKIATLMDLPPVVLSERLFTDGSREVYYPAPLLELWMRSIRQPPDSP 360
            RKRK RTG M T KI TLMDLPPVVLSERLFT+GSRE YYPAPLLELWMRSIRQ PDSP
Sbjct: 301 RRKRK-RTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSP 360

Query: 361 SERNSAPLPPEPSLSSLPERVNFSDHMDFSFEGHQSGVGSQSFGASMEKLMTRRVNDSNQ 420
           SERNS P PPEPS+SS  ERVNFSDH DF FE H SGVGSQSFG SMEKLMT +VND   
Sbjct: 361 SERNSTPFPPEPSVSSRRERVNFSDHTDFPFEDHYSGVGSQSFGGSMEKLMTGQVNDG-- 420

Query: 421 AEIP-EELGPNIMDNVMRMTERNQVVTPGNSVNGVRSVSSSASGHGDLSNNLGTNSVRSN 480
           AEIP EELGPNIMDNVM M ERNQ+ TPGNS  GVRSVSSSAS H  LS N GT+SVR N
Sbjct: 421 AEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSVRFN 480

Query: 481 KKRPYSSSRQSSGGLEPVAEENPWHHHSDPNFKLARLSENDPDLLEETARTQTQVTQPAI 540
           KKRPYSSS++SSGGLEPVAEENPW HHSDPNFKLARLSENDPDLLEETA TQTQV+Q A 
Sbjct: 481 KKRPYSSSKRSSGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQVSQAAF 540

Query: 541 KHPPADKITDSIRTQMKAHFDTPGAASTESLNNLAAGMNRKAAAMLFYQTC 591
           KHPPADKITDSIR QMKAHFDTPGAASTESLNNLAAGMNRKAAAMLFYQTC
Sbjct: 541 KHPPADKITDSIRMQMKAHFDTPGAASTESLNNLAAGMNRKAAAMLFYQTC 588

[Close]

BLAST of Clc07G04540 vs. ExPASy TrEMBL
Match: A0A5A7SX09 (Sister chromatid cohesion 1 protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00380 PE=4 SV=1)

HSP 1 Score: 963.0 bits (2488), Expect = 6.0e-277
Identity = 509/591 (86.13%), Postives = 532/591 (90.02%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKSLAKKEAVTRPEKDPK 120
           GGVVIVYERKVKILY +    L+EINEAWKVKAAPEPT +PKGKSLAKKEAVTRPEKDP 
Sbjct: 61  GGVVIVYERKVKILYGN----LIEINEAWKVKAAPEPTALPKGKSLAKKEAVTRPEKDPN 120

Query: 121 DVSYNTSPMRFQQTAFFTMRLDSVDEQYNSDKTVEDDPSQNFHQTDAENITLVERFDMYQ 180
           DVSY+TSPM+FQQTAFF+MRLDSVDE Y +DKTVEDDPSQNFHQTD ENITL+ERFDMYQ
Sbjct: 121 DVSYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDIENITLIERFDMYQ 180

Query: 181 SNTNTFNRFERFDIEEDEDTQPNFASVDQTQIPATFKDSPPPQDKYPEGPPDAEVQDQHL 240
           S T+TF+RFERFDIEE EDTQP+FASVDQTQIPAT + SPPP DKYPEGPPDAEVQDQHL
Sbjct: 181 SKTSTFDRFERFDIEEYEDTQPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHL 240

Query: 241 ESNVNQPAYESTELRQVEQVARKRKTKRTAASLMDYEQTIIPGHIYQCWLKDVSDLISRR 300
           E NV+QPA ES E RQ+EQ ARKRK KRTAASLMDYEQTIIPGH+YQ WLKDVSDLISRR
Sbjct: 241 EHNVDQPAKESKEHRQLEQEARKRKAKRTAASLMDYEQTIIPGHVYQSWLKDVSDLISRR 300

Query: 301 GRKRKQRTGAMSTMKIATLMDLPPVVLSERLFTDGSREVYYPAPLLELWMRSIRQPPDSP 360
            RKRKQRTG M T KI TLMDLPPVVLSERLFT+GSRE YYPAPLLELWMRSIRQ PDSP
Sbjct: 301 RRKRKQRTGPMFTKKIVTLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQSPDSP 360

Query: 361 SERNSAPLPPEPSLSSLPERVNFSDHMDFSFEGHQSGVGSQSFGASMEKLMTRRVNDSNQ 420
           SERNS P PPEPS+SS  ERVNFSDH DF FE H SGVGSQSFG SMEKLMT +VND   
Sbjct: 361 SERNSTPFPPEPSVSSRRERVNFSDHTDFPFEDHYSGVGSQSFGGSMEKLMTGQVNDG-- 420

Query: 421 AEIP-EELGPNIMDNVMRMTERNQVVTPGNSVNGVRSVSSSASGHGDLSNNLGTNSVRSN 480
           AEIP EELGPNIMDNVM M ERNQ+ TPGNS  GVRSVSSSAS H  LS N GT+SVR N
Sbjct: 421 AEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSVRFN 480

Query: 481 KKRPYSSSRQSSGGLEPVAEENPWHHHSDPNFKLARLSENDPDLLEETARTQTQVTQPAI 540
           KKRPYSSS++SSGGLEPVAEENPW HHSDPNFKLARLSENDPDLLEETA TQTQV+Q A 
Sbjct: 481 KKRPYSSSKRSSGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQVSQAAF 540

Query: 541 KHPPADKITDSIRTQMKAHFDTPGAASTESLNNLAAGMNRKAAAMLFYQTC 591
           KHPPADKITDSIR QMKAHFDTPGAASTESLNNLAAGMNRKAAAMLFYQTC
Sbjct: 541 KHPPADKITDSIRMQMKAHFDTPGAASTESLNNLAAGMNRKAAAMLFYQTC 585

[Close]

BLAST of Clc07G04540 vs. TAIR 10
Match: AT5G05490.2 (Rad21/Rec8-like family protein )

HSP 1 Score: 437.6 bits (1124), Expect = 1.7e-122
Identity = 294/640 (45.94%), Postives = 378/640 (59.06%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAAT+HAKINR+KLDKL+II+ICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATLHAKINRKKLDKLDIIQICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKSLAKKEAVTRPEKDPK 120
           GGVVIVYERKVK+L++DV R LVEIN AW+ K+ P+PT++PKGK+ A+KEAVT PE +  
Sbjct: 61  GGVVIVYERKVKLLFDDVNRFLVEINGAWRTKSVPDPTLLPKGKTHARKEAVTLPENEEA 120

Query: 121 D---------VSYNTSPMRFQQTAFFTMRLDSVDEQYNSDKTVEDDPSQNFHQTDAENIT 180
           D         V    + M FQQT F +MRL   DE + ++    +D  Q FHQ DAENIT
Sbjct: 121 DFGDFEQTRNVPKFGNYMDFQQT-FISMRL---DESHVNNNPEPEDLGQQFHQADAENIT 180

Query: 181 LVERFDMYQSNTNTFNRFERFDIEEDEDTQPNFASVDQTQIPATFKDSPPPQDKYPEGPP 240
           L E    +Q+N  T++RFERFDIE D++TQ N    +  +IP T   SPP     PEG  
Sbjct: 181 LFEYHGSFQTNNETYDRFERFDIEGDDETQMNSNPREGAEIPTTLIPSPPRHHDIPEGVN 240

Query: 241 DAEVQDQHLESNVNQPAYESTELRQV---EQVAR----KRKTKRTAASLMDYEQTIIPGH 300
               Q Q  + N      E  E + +   E+  R    K++ ++TA S MDYEQTII GH
Sbjct: 241 PTSPQRQEQQENRRDGFAEQMEEQNIPDKEEHDRPQPAKKRARKTATSAMDYEQTIIAGH 300

Query: 301 IYQCWLKDVSDLISRRGRKRKQRTGAMSTMKIATLMDLPPVVLSERLFTDGSREVYYPAP 360
           +YQ WL+D SD++  RG KRK R      M+     ++PP  L E+   D S    YP  
Sbjct: 301 VYQSWLQDTSDILC-RGEKRKVRGTIRPDMESFKRANMPPTQLFEK---DSS----YPPQ 360

Query: 361 LLELWMRSIRQPPDSPSERNSAPLPPEPSLSSLPERVNFSDHMDFSFEGHQSGVGSQSFG 420
           L +LW ++ +    S SE     L  E S   + ER++     D      +S   SQ+  
Sbjct: 361 LYQLWSKNTQVLQTSSSESRHPDLRAEQSPGFVQERMHNHHQTD---HHERSDTSSQNLD 420

Query: 421 ASMEKLMTRRVNDSNQAEIPEELGPNIMDNVMRMTERNQVVTPGNSVNGVRSVSSSASGH 480
           +  E L T R       E     G       +     +  VTP  S + VRS+ S+ S  
Sbjct: 421 SPAEILRTVRTGKGASVE-SMMAGSRASPETINRQAADINVTPFYSGDDVRSMPSTPSAR 480

Query: 481 GDLSNN---LGTNSVRSNKKRPYSSSRQSSGGLEPVAEENPWHHHSDPNFKLARLSEN-- 540
           G  S N   + + S   N+KRP SS R+   GLEPVAEE PW H  +  F+ + L E   
Sbjct: 481 GAASINNIEISSKSRMPNRKRPNSSPRR---GLEPVAEERPWEHR-EYEFEFSMLPEKRF 540

Query: 541 --DPDLLEETARTQTQVTQPAIKHPPADKITDSIRTQMKAHFDTPGAASTESLNNLAAGM 600
             D ++L ETA TQ   TQ  + +   + ITDSI++ +K HF+TPGA   ESLN LA GM
Sbjct: 541 TADKEILFETASTQ---TQKPVCNQSDEMITDSIKSHLKTHFETPGAPQVESLNKLAVGM 600

Query: 601 NRKAAAMLFYQTCVLASSDYLKVNQQVPFGDIFISKGTKM 618
           +R AAA LF+Q+CVLA+   +KVNQ  P+GDI I++G  M
Sbjct: 601 DRNAAAKLFFQSCVLATRGVIKVNQAEPYGDILIARGPNM 617

[Close]

BLAST of Clc07G04540 vs. TAIR 10
Match: AT5G05490.1 (Rad21/Rec8-like family protein )

HSP 1 Score: 424.1 bits (1089), Expect = 1.9e-118
Identity = 288/634 (45.43%), Postives = 372/634 (58.68%), Query Frame = 0


Query: 7   LLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIV 66
           LLARKAPLGQIWMAAT+HAKINR+KLDKL+II+ICEEILNPSVPMALRLSGILMGGVVIV
Sbjct: 17  LLARKAPLGQIWMAATLHAKINRKKLDKLDIIQICEEILNPSVPMALRLSGILMGGVVIV 76

Query: 67  YERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKSLAKKEAVTRPEKDPKD----- 126
           YERKVK+L++DV R LVEIN AW+ K+ P+PT++PKGK+ A+KEAVT PE +  D     
Sbjct: 77  YERKVKLLFDDVNRFLVEINGAWRTKSVPDPTLLPKGKTHARKEAVTLPENEEADFGDFE 136

Query: 127 ----VSYNTSPMRFQQTAFFTMRLDSVDEQYNSDKTVEDDPSQNFHQTDAENITLVERFD 186
               V    + M FQQT F +MRL   DE + ++    +D  Q FHQ DAENITL E   
Sbjct: 137 QTRNVPKFGNYMDFQQT-FISMRL---DESHVNNNPEPEDLGQQFHQADAENITLFEYHG 196

Query: 187 MYQSNTNTFNRFERFDIEEDEDTQPNFASVDQTQIPATFKDSPPPQDKYPEGPPDAEVQD 246
            +Q+N  T++RFERFDIE D++TQ N    +  +IP T   SPP     PEG      Q 
Sbjct: 197 SFQTNNETYDRFERFDIEGDDETQMNSNPREGAEIPTTLIPSPPRHHDIPEGVNPTSPQR 256

Query: 247 QHLESNVNQPAYESTELRQV---EQVAR----KRKTKRTAASLMDYEQTIIPGHIYQCWL 306
           Q  + N      E  E + +   E+  R    K++ ++TA S MDYEQTII GH+YQ WL
Sbjct: 257 QEQQENRRDGFAEQMEEQNIPDKEEHDRPQPAKKRARKTATSAMDYEQTIIAGHVYQSWL 316

Query: 307 KDVSDLISRRGRKRKQRTGAMSTMKIATLMDLPPVVLSERLFTDGSREVYYPAPLLELWM 366
           +D SD++  RG KRK R      M+     ++PP  L E+   D S    YP  L +LW 
Sbjct: 317 QDTSDILC-RGEKRKVRGTIRPDMESFKRANMPPTQLFEK---DSS----YPPQLYQLWS 376

Query: 367 RSIRQPPDSPSERNSAPLPPEPSLSSLPERVNFSDHMDFSFEGHQSGVGSQSFGASMEKL 426
           ++ +    S SE     L  E S   + ER++     D      +S   SQ+  +  E L
Sbjct: 377 KNTQVLQTSSSESRHPDLRAEQSPGFVQERMHNHHQTD---HHERSDTSSQNLDSPAEIL 436

Query: 427 MTRRVNDSNQAEIPEELGPNIMDNVMRMTERNQVVTPGNSVNGVRSVSSSASGHGDLSNN 486
            T R       E     G       +     +  VTP  S + VRS+ S+ S  G  S N
Sbjct: 437 RTVRTGKGASVE-SMMAGSRASPETINRQAADINVTPFYSGDDVRSMPSTPSARGAASIN 496

Query: 487 ---LGTNSVRSNKKRPYSSSRQSSGGLEPVAEENPWHHHSDPNFKLARLSEN----DPDL 546
              + + S   N+KRP SS R+   GLEPVAEE PW H  +  F+ + L E     D ++
Sbjct: 497 NIEISSKSRMPNRKRPNSSPRR---GLEPVAEERPWEHR-EYEFEFSMLPEKRFTADKEI 556

Query: 547 LEETARTQTQVTQPAIKHPPADKITDSIRTQMKAHFDTPGAASTESLNNLAAGMNRKAAA 606
           L ETA TQ   TQ  + +   + ITDSI++ +K HF+TPGA   ESLN LA GM+R AAA
Sbjct: 557 LFETASTQ---TQKPVCNQSDEMITDSIKSHLKTHFETPGAPQVESLNKLAVGMDRNAAA 616

Query: 607 MLFYQTCVLASSDYLKVNQQVPFGDIFISKGTKM 618
            LF+Q+CVLA+   +KVNQ  P+GDI I++G  M
Sbjct: 617 KLFFQSCVLATRGVIKVNQAEPYGDILIARGPNM 627

[Close]

BLAST of Clc07G04540 vs. TAIR 10
Match: AT3G59550.1 (Rad21/Rec8-like family protein )

HSP 1 Score: 81.3 bits (199), Expect = 3.1e-15
Identity = 53/135 (39.26%), Postives = 72/135 (53.33%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSH LLARK PLG +W AA +H ++ + +   +NI    + I+ P VP+ALR S  L+
Sbjct: 1   MFYSHTLLARKGPLGTVWCAAHVHQRLKKSQYTSINIPDTVDNIMFPEVPLALRTSSHLL 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTV-IPKGKSLAKKEAVTRPEK-- 120
            GVV +Y +KV  LY D   L       W  KA     V +P+    A  E+VT P+   
Sbjct: 61  VGVVRIYSKKVDYLYNDWNLL-----NTWVAKAFVSTQVNLPEDARQAPPESVTLPQALN 120

Query: 121 -DPKDVSYNTSPMRF 132
            D  D+  +T  M F
Sbjct: 121 LDEFDLEDDTLDMEF 130

HSP 2 Score: 38.9 bits (89), Expect = 1.8e-02
Identity = 18/41 (43.90%), Postives = 26/41 (63.41%), Query Frame = 0


Query: 569 SLNNLAAGMNRKAAAMLFYQTCVLASSDYLKVNQQVPFGDI 610
           SL+ + AG  RK AA +F++T VL S   + + Q  P+GDI
Sbjct: 639 SLSEILAGKTRKLAARMFFETLVLKSRGLIDMQQDRPYGDI 679

[Close]

BLAST of Clc07G04540 vs. TAIR 10
Match: AT5G16270.1 (sister chromatid cohesion 1 protein 4 )

HSP 1 Score: 77.4 bits (189), Expect = 4.4e-14
Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYS  +LA+K PLG IW+AA +  K+ + ++   +I    + IL P  P+ALRLS  L+
Sbjct: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEAPIALRLSSHLL 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKSLAKKEAVTRPE 117
            GVV +Y RKV  L++D +  L+++ +A++  A      +P  +S A   ++T PE
Sbjct: 61  LGVVRIYSRKVNYLFDDCSEALLKVKQAFRSAAVD----LPPEESTAPYHSITLPE 112

HSP 2 Score: 38.5 bits (88), Expect = 2.3e-02
Identity = 22/72 (30.56%), Postives = 37/72 (51.39%), Query Frame = 0


Query: 548  TDSIRTQMKAHFD--TPGAASTESLNNLAAGMNRKAAAMLFYQTCVLASSDYLKVNQQVP 607
            T ++   ++  FD  T    +    + L AG  RK A+ +F++T VL + DY++V Q  P
Sbjct: 955  TRAVAKYLQTLFDKETENGKNVLVADKLLAGKTRKEASRMFFETLVLKTRDYIQVEQGKP 1014

Query: 608  FGDIFISKGTKM 618
            +  I I    K+
Sbjct: 1015 YESIIIKPRPKL 1026

[Close]

BLAST of Clc07G04540 vs. TAIR 10
Match: AT5G40840.1 (Rad21/Rec8-like family protein )

HSP 1 Score: 57.4 bits (137), Expect = 4.8e-08
Identity = 57/209 (27.27%), Postives = 101/209 (48.33%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSV-PMALRLSGIL 60
           MFYSH L++RK PLG IW+AA    K+ + ++   +I    ++IL   +  +  R+   L
Sbjct: 1   MFYSHCLVSRKGPLGAIWVAAYFFKKLKKSQVKATHIPSSVDQILQKELDALTYRVLAYL 60

Query: 61  MGGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKSLAKKEAVTRPEKDP 120
           + GVV +Y +KV  L++D  + L+ + E    +   E T +    S+ +  ++  PE   
Sbjct: 61  LLGVVRIYSKKVDFLFDDCNKALIGVKEFVAKERNREKTGVSLPASI-ECFSIALPE--- 120

Query: 121 KDVSYNTSPMRFQQTAFFTMRLDSV---DEQYNSDKTVEDDPSQNFHQTDAENITLVERF 180
                     RF+  AF    L+     + + + D T++D       +T+  ++  +ERF
Sbjct: 121 ----------RFELDAFDLGVLEDFHGGNVKPHEDITLKD----GSQETERMDMYSMERF 180

Query: 181 DMYQSNTNTFNRFERFDIEEDEDTQPNFA 206
           DM +    TF+  E F    +E+   +FA
Sbjct: 181 DMEEDLLFTFH--ETFSTNHNENKHESFA 189

HSP 2 Score: 40.8 bits (94), Expect = 4.6e-03
Identity = 18/45 (40.00%), Postives = 28/45 (62.22%), Query Frame = 0


Query: 569 SLNNLAAGMNRKAAAMLFYQTCVLASSDYLKVNQQVPFGDIFISK 614
           SL  L  G  +K +A LFY+T VL +  Y++V Q  P+ D+F+ +
Sbjct: 757 SLLQLCRGRTQKESARLFYETLVLKTKGYVEVKQNHPYSDVFLMR 801

The following BLAST results are available for this feature:

BLAST of Clc07G04540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891624.1	4.7e-300	88.87	sister chromatid cohesion 1 protein 1 [Benincasa hispida]	[more]
XP_008454870.1	9.8e-298	87.70	PREDICTED: sister chromatid cohesion 1 protein 1 [Cucumis melo]	[more]
XP_031742082.1	3.7e-297	87.38	sister chromatid cohesion 1 protein 1 [Cucumis sativus]	[more]
XP_023552287.1	1.8e-291	86.62	sister chromatid cohesion 1 protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022957007.1	2.0e-287	85.83	sister chromatid cohesion 1 protein 1-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Clc07G04540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7T7	2.7e-117	45.43	Sister chromatid cohesion 1 protein 1 OS=Arabidopsis thaliana OX=3702 GN=SYN1 PE...	[more]
Q9FQ19	4.3e-14	39.26	Sister chromatid cohesion 1 protein 3 OS=Arabidopsis thaliana OX=3702 GN=SYN3 PE...	[more]
Q8W1Y0	6.3e-13	37.93	Sister chromatid cohesion 1 protein 4 OS=Arabidopsis thaliana OX=3702 GN=SYN4 PE...	[more]
Q6TEL1	2.0e-11	35.90	Double-strand-break repair protein rad21 homolog A OS=Danio rerio OX=7955 GN=rad...	[more]
Q3SWX9	2.6e-11	35.90	Double-strand-break repair protein rad21 homolog OS=Bos taurus OX=9913 GN=RAD21 ...	[more]

BLAST of Clc07G04540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BZ41	4.7e-298	87.70	sister chromatid cohesion 1 protein 1 OS=Cucumis melo OX=3656 GN=LOC103495180 PE...	[more]
A0A6J1GXZ1	9.9e-288	85.83	sister chromatid cohesion 1 protein 1-like isoform X1 OS=Cucurbita moschata OX=3...	[more]
A0A6J1JET8	1.6e-285	85.51	sister chromatid cohesion 1 protein 1-like isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A5D3E364	3.4e-280	86.97	Sister chromatid cohesion 1 protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5A7SX09	6.0e-277	86.13	Sister chromatid cohesion 1 protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of Clc07G04540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05490.2	1.7e-122	45.94	Rad21/Rec8-like family protein	[more]
AT5G05490.1	1.9e-118	45.43	Rad21/Rec8-like family protein	[more]
AT3G59550.1	3.1e-15	39.26	Rad21/Rec8-like family protein	[more]
AT5G16270.1	4.4e-14	37.93	sister chromatid cohesion 1 protein 4	[more]
AT5G40840.1	4.8e-08	27.27	Rad21/Rec8-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006909	Rad21/Rec8-like protein, C-terminal, eukaryotic	PFAM	PF04824	Rad21_Rec8	coord: 568..617 e-value: 1.8E-17 score: 62.3
IPR006910	Rad21/Rec8-like protein, N-terminal	PFAM	PF04825	Rad21_Rec8_N	coord: 1..95 e-value: 5.1E-35 score: 120.0
IPR023093	ScpA-like, C-terminal	GENE3D	1.10.10.580	Structural maintenance of chromosome 1. Chain E	coord: 543..617 e-value: 2.2E-9 score: 39.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 444..494
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 499..513
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 444..513
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 356..379
None	No IPR available	PANTHER	PTHR12585:SF64	SISTER CHROMATID COHESION 1 PROTEIN 1	coord: 1..617
IPR039781	Rad21/Rec8-like protein	PANTHER	PTHR12585	SCC1 / RAD21 FAMILY MEMBER	coord: 1..617
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 548..617

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G04540.2	Clc07G04540.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0033540	fatty acid beta-oxidation using acyl-CoA oxidase
biological_process	GO:0055088	lipid homeostasis
biological_process	GO:0001676	long-chain fatty acid metabolic process
biological_process	GO:0010032	meiotic chromosome condensation
biological_process	GO:0051754	meiotic sister chromatid cohesion, centromeric
biological_process	GO:0051455	monopolar spindle attachment to meiosis I kinetochore
biological_process	GO:0000038	very long-chain fatty acid metabolic process
biological_process	GO:0007062	sister chromatid cohesion
cellular_component	GO:0008278	cohesin complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005777	peroxisome
molecular_function	GO:0071949	FAD binding
molecular_function	GO:0005504	fatty acid binding
molecular_function	GO:0016401	palmitoyl-CoA oxidase activity
molecular_function	GO:0005515	protein binding