Clc07G03870 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G03870
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	17.8 kDa class I heat shock protein-like
Location	ClcChr07: 3963582 .. 3964061 (+)
RNA-Seq Expression	Clc07G03870
Synteny	Clc07G03870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTGATTCCAACCATTTTCGGTGGCCGCCGGAGCAACGTTTTCGATCCCTTTTCACTGGACGTTTGGGATCCCTTCGAAGGTTTCCCATTTTCAAACTCCCTGGCCAACCTCCCATCCTCTGCTCGTGAGACCTCTGCTTTTGCCAACACTCGCATCGACTGGAAAGAGACCCCCCAAGCCCACATCTTCAAGGCCGATCTTCCCGGTATCAAAAAGGAAGAAGTCAAAGTTGAAGTGGAAGAAGGCAGAGTGTTGCAGATCAGTGGAGAGAGAAGCAAGGAACATGAAGAGAAGAACGACAAATGGCATAGAATTGAGCGGAGCAGTGGAAAGTTCATGAGGCGATTCAGGCTGCCGGAAAATGCTAAAGCGGAGGAGGTGAAGGCCAGCATGGAGAATGGAGTGCTGACGGTGACGGTGCCCAAAATAGAAGAGAAGAAGCCTGAAGTGAAGTCTATTGACATCTCTGGCTAG

mRNA sequence

ATGGCTCTGATTCCAACCATTTTCGGTGGCCGCCGGAGCAACGTTTTCGATCCCTTTTCACTGGACGTTTGGGATCCCTTCGAAGGTTTCCCATTTTCAAACTCCCTGGCCAACCTCCCATCCTCTGCTCGTGAGACCTCTGCTTTTGCCAACACTCGCATCGACTGGAAAGAGACCCCCCAAGCCCACATCTTCAAGGCCGATCTTCCCGGTATCAAAAAGGAAGAAGTCAAAGTTGAAGTGGAAGAAGGCAGAGTGTTGCAGATCAGTGGAGAGAGAAGCAAGGAACATGAAGAGAAGAACGACAAATGGCATAGAATTGAGCGGAGCAGTGGAAAGTTCATGAGGCGATTCAGGCTGCCGGAAAATGCTAAAGCGGAGGAGGTGAAGGCCAGCATGGAGAATGGAGTGCTGACGGTGACGGTGCCCAAAATAGAAGAGAAGAAGCCTGAAGTGAAGTCTATTGACATCTCTGGCTAG

Coding sequence (CDS)

ATGGCTCTGATTCCAACCATTTTCGGTGGCCGCCGGAGCAACGTTTTCGATCCCTTTTCACTGGACGTTTGGGATCCCTTCGAAGGTTTCCCATTTTCAAACTCCCTGGCCAACCTCCCATCCTCTGCTCGTGAGACCTCTGCTTTTGCCAACACTCGCATCGACTGGAAAGAGACCCCCCAAGCCCACATCTTCAAGGCCGATCTTCCCGGTATCAAAAAGGAAGAAGTCAAAGTTGAAGTGGAAGAAGGCAGAGTGTTGCAGATCAGTGGAGAGAGAAGCAAGGAACATGAAGAGAAGAACGACAAATGGCATAGAATTGAGCGGAGCAGTGGAAAGTTCATGAGGCGATTCAGGCTGCCGGAAAATGCTAAAGCGGAGGAGGTGAAGGCCAGCATGGAGAATGGAGTGCTGACGGTGACGGTGCCCAAAATAGAAGAGAAGAAGCCTGAAGTGAAGTCTATTGACATCTCTGGCTAG

Protein sequence

MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRLPENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG

Homology

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BLAST of Clc07G03870 vs. NCBI nr
Match: ADU55789.1 (HSP18.1A [Citrullus lanatus])

HSP 1 Score: 314.7 bits (805), Expect = 4.6e-82
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG
Sbjct: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 159

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BLAST of Clc07G03870 vs. NCBI nr
Match: KAA0051547.1 (17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYK21276.1 17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 304.7 bits (779), Expect = 4.7e-79
Identity = 151/159 (94.97%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           MALIPTIFGGRRSNVFDPFSLD+WDPFEGFPFSNSLANLPSSAR+TSAFANTRIDWKETP
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARDTSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGI KEEVKVEVEEGRVLQISGERSKE EEKNDKWHR+ERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAK EEVKASMENGVLTVTVPK+EEKKPE+KSIDISG
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 159

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BLAST of Clc07G03870 vs. NCBI nr
Match: KAA0037328.1 (18.1 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 301.6 bits (771), Expect = 4.0e-78
Identity = 150/159 (94.34%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           MALIP+IF GRRSNVFDPFSLD+WDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFDGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGI KEEVKVEVEEGRVLQISGERSKE EEKNDKWHR+ERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAK EEVKASMENGVLTVTVPK+EEKKPE+KSIDISG
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 159

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BLAST of Clc07G03870 vs. NCBI nr
Match: XP_008463198.1 (PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo] >KAA0037330.1 18.1 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYJ97577.1 18.1 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 301.2 bits (770), Expect = 5.2e-78
Identity = 150/159 (94.34%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           MALIP+IFGGRRSNVFDPFSLD+WDPFEGF FSNSLANLPSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKE EEKNDKWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAK EEVKA+MENGVLTVTVPK+EEKKPE+KSIDI+G
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEEKKPEIKSIDIAG 159

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BLAST of Clc07G03870 vs. NCBI nr
Match: TYK24125.1 (17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 300.4 bits (768), Expect = 8.9e-78
Identity = 149/159 (93.71%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           MALIP+IF GRRSNVFDPFSLD+WDPFEGFPFSNSLANLPSSAR+TSAFANTRIDWKETP
Sbjct: 1   MALIPSIFDGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARDTSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGI KEEVKVEVEEGRVLQISGERSKE EEKNDKWHR+ERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAK EEVKASMENGVLTVTVPK+EEKKPE+KSIDISG
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 159

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BLAST of Clc07G03870 vs. ExPASy Swiss-Prot
Match: P19037 (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 3.7e-66
Identity = 124/159 (77.99%), Postives = 141/159 (88.68%), Query Frame = 0


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           M+LIP+IFGGRRSNVFDPFS D+WDPFEGF   +S     S+AR+ +AF N R+DWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           +AH+FKADLPG+KKEEVKVEVE+  VLQISGERSKE+EEKNDKWHR+ER+SGKFMRRFRL
Sbjct: 61  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAK EEVKA+MENGVLTV VPK  EKKP+VKSIDISG
Sbjct: 121 PENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

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BLAST of Clc07G03870 vs. ExPASy Swiss-Prot
Match: P27396 (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 4.8e-66
Identity = 123/159 (77.36%), Postives = 142/159 (89.31%), Query Frame = 0


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           M++IP+ FGGRRSNVFDPFSLDVWDPF+ FP   S A+     +ET+AF NT IDWKETP
Sbjct: 1   MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSAS--EFGKETAAFVNTHIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           QAH+FKADLPG+KKEEVKVE+EEG+VLQISGER+KE EEKNDKWHR+ERSSGKF+RRFRL
Sbjct: 61  QAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAK +EVKA+M NGV+TVTVPK+E KKPEVK+IDISG
Sbjct: 121 PENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157

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BLAST of Clc07G03870 vs. ExPASy Swiss-Prot
Match: P13853 (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 251.1 bits (640), Expect = 8.2e-66
Identity = 122/159 (76.73%), Postives = 143/159 (89.94%), Query Frame = 0


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           M+LIP+IFGGRR+NVFDPFSLDV+DPFEGF   + LAN P  A + +AF N ++DW+ETP
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           +AH+FKADLPG++KEEVKVEVE+G +LQISGERS E+EEKNDKWHR+ERSSGKF RRFRL
Sbjct: 61  EAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAK EE+KASMENGVL+VTVPK+ EKKPEVKSIDISG
Sbjct: 121 PENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of Clc07G03870 vs. ExPASy Swiss-Prot
Match: P27880 (18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 8.2e-66
Identity = 125/159 (78.62%), Postives = 143/159 (89.94%), Query Frame = 0


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           M+LIP+ FGGRRSNVFDPFSLDVWDPF+ FPF+NS A   S  RE SAF +TR+DWKETP
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNS-ALSASFPRENSAFVSTRVDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           +AH+FKADLPG+KKEEVKVE+E+ RVLQISGERS E E+KND+WHR+ERSSGKFMRRFRL
Sbjct: 61  EAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAK ++VKA+MENGVLTVTVPK E KKPEVK+IDISG
Sbjct: 121 PENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158

[Close]

BLAST of Clc07G03870 vs. ExPASy Swiss-Prot
Match: P05478 (18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.4e-65
Identity = 120/161 (74.53%), Postives = 143/161 (88.82%), Query Frame = 0


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSL--ANLPSSARETSAFANTRIDWKE 60
           M+LIP  FGGRR+NVFDPFSLDVWDPF+ FPF N+L  A+ P  +RE SAF +TR+DWKE
Sbjct: 1   MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKE 60

Query: 61  TPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRF 120
           TP+AH+FKAD+PG+KKEEVKV++E+ +VLQISGER+ E E+KND WHR+ERSSGKFMRRF
Sbjct: 61  TPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRF 120

Query: 121 RLPENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           RLPENAK E+VKASMENGVLTVTVPK E KKP+VK+I+ISG
Sbjct: 121 RLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161

[Close]

BLAST of Clc07G03870 vs. ExPASy TrEMBL
Match: H6TB42 (HSP18.1A OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.2e-82
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG
Sbjct: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 159

[Close]

BLAST of Clc07G03870 vs. ExPASy TrEMBL
Match: A0A5A7UAZ9 (17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold101G00300 PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.3e-79
Identity = 151/159 (94.97%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           MALIPTIFGGRRSNVFDPFSLD+WDPFEGFPFSNSLANLPSSAR+TSAFANTRIDWKETP
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARDTSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGI KEEVKVEVEEGRVLQISGERSKE EEKNDKWHR+ERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAK EEVKASMENGVLTVTVPK+EEKKPE+KSIDISG
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 159

[Close]

BLAST of Clc07G03870 vs. ExPASy TrEMBL
Match: A0A5A7T3F7 (18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold278G00190 PE=3 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 1.9e-78
Identity = 150/159 (94.34%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           MALIP+IF GRRSNVFDPFSLD+WDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFDGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGI KEEVKVEVEEGRVLQISGERSKE EEKNDKWHR+ERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAK EEVKASMENGVLTVTVPK+EEKKPE+KSIDISG
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 159

[Close]

BLAST of Clc07G03870 vs. ExPASy TrEMBL
Match: A0A5D3BEM2 (18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G001020 PE=3 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.5e-78
Identity = 150/159 (94.34%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           MALIP+IFGGRRSNVFDPFSLD+WDPFEGF FSNSLANLPSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKE EEKNDKWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAK EEVKA+MENGVLTVTVPK+EEKKPE+KSIDI+G
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of Clc07G03870 vs. ExPASy TrEMBL
Match: A0A1S3CIN2 (18.1 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103501408 PE=3 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.5e-78
Identity = 150/159 (94.34%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           MALIP+IFGGRRSNVFDPFSLD+WDPFEGF FSNSLANLPSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKE EEKNDKWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAK EEVKA+MENGVLTVTVPK+EEKKPE+KSIDI+G
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of Clc07G03870 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 252.3 bits (643), Expect = 2.6e-67
Identity = 124/159 (77.99%), Postives = 141/159 (88.68%), Query Frame = 0


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           M+LIP+IFGGRRSNVFDPFS D+WDPFEGF   +S     S+AR+ +AF N R+DWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           +AH+FKADLPG+KKEEVKVEVE+  VLQISGERSKE+EEKNDKWHR+ER+SGKFMRRFRL
Sbjct: 61  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAK EEVKA+MENGVLTV VPK  EKKP+VKSIDISG
Sbjct: 121 PENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of Clc07G03870 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 251.1 bits (640), Expect = 5.8e-67
Identity = 122/159 (76.73%), Postives = 143/159 (89.94%), Query Frame = 0


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           M+LIP+IFGGRR+NVFDPFSLDV+DPFEGF   + LAN P  A + +AF N ++DW+ETP
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           +AH+FKADLPG++KEEVKVEVE+G +LQISGERS E+EEKNDKWHR+ERSSGKF RRFRL
Sbjct: 61  EAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAK EE+KASMENGVL+VTVPK+ EKKPEVKSIDISG
Sbjct: 121 PENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of Clc07G03870 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 247.3 bits (630), Expect = 8.4e-66
Identity = 118/159 (74.21%), Postives = 142/159 (89.31%), Query Frame = 0


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           M+L+P+ FGGRR+NVFDPFSLDVWDPFEGF  +  L N P  A++ +AF N ++DW+ETP
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGF-LTPGLTNAP--AKDVAAFTNAKVDWRETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           +AH+FKAD+PG+KKEEVKVEVE+G +LQISGERS E+EEK+D WHR+ERSSGKFMRRFRL
Sbjct: 61  EAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAK EEVKASMENGVL+VTVPK++E KPEVKS+DISG
Sbjct: 121 PENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of Clc07G03870 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 210.7 bits (535), Expect = 8.7e-55
Identity = 107/160 (66.88%), Postives = 127/160 (79.38%), Query Frame = 0


Query: 1   MALIPTIF-GGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKET 60
           M++IP+ F   RRSN+FDPFSLDVWDPF+    S       S +RE SA  N R+DW+ET
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSS-------SLSRENSAIVNARVDWRET 60

Query: 61  PQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFR 120
           P+AH+FKADLPG+KKEEVKVE+EE  VL+ISGER  E E+KND WHR+ERSSG+F RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFR 120

Query: 121 LPENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           LPEN K ++VKA+MENGVLTVTVPK E KK +VKSI ISG
Sbjct: 121 LPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

[Close]

BLAST of Clc07G03870 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 209.1 bits (531), Expect = 2.5e-54
Identity = 110/163 (67.48%), Postives = 131/163 (80.37%), Query Frame = 0


Query: 1   MALIPTIFG-GRRSN-VFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKE 60
           M+LIP+ FG  RRSN +FDPFSLDVWDPF+   F +SL+       ETSA  N R+DWKE
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSG------ETSAITNARVDWKE 60

Query: 61  TPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRF 120
           T +AH+FKADLPG+KKEEVKVE+E+  VL+ISGER  E EEK D WHR+ERSSG+F R+F
Sbjct: 61  TAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKF 120

Query: 121 RLPENAKAEEVKASMENGVLTVTVPKIEE--KKPEVKSIDISG 160
           +LPEN K ++VKASMENGVLTVTVPK+EE  KK +VKSIDISG
Sbjct: 121 KLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

The following BLAST results are available for this feature:

BLAST of Clc07G03870 vs. NCBI nr


Match Name	E-value	Identity	Description
ADU55789.1	4.6e-82	100.00	HSP18.1A [Citrullus lanatus]	[more]
KAA0051547.1	4.7e-79	94.97	17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYK21276.1 ...	[more]
KAA0037328.1	4.0e-78	94.34	18.1 kDa class I heat shock protein-like [Cucumis melo var. makuwa]	[more]
XP_008463198.1	5.2e-78	94.34	PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo] >KAA0037330.1...	[more]
TYK24125.1	8.9e-78	93.71	17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa]	[more]

BLAST of Clc07G03870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P19037	3.7e-66	77.99	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 P...	[more]
P27396	4.8e-66	77.36	17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1	[more]
P13853	8.2e-66	76.73	17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6...	[more]
P27880	8.2e-66	78.62	18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 S...	[more]
P05478	2.4e-65	74.53	18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=...	[more]

BLAST of Clc07G03870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
H6TB42	2.2e-82	100.00	HSP18.1A OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
A0A5A7UAZ9	2.3e-79	94.97	17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7T3F7	1.9e-78	94.34	18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3BEM2	2.5e-78	94.34	18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3CIN2	2.5e-78	94.34	18.1 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103501408...	[more]

BLAST of Clc07G03870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59720.1	2.6e-67	77.99	heat shock protein 18.2	[more]
AT1G53540.1	5.8e-67	76.73	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	8.4e-66	74.21	heat shock protein 17.4	[more]
AT2G29500.1	8.7e-55	66.88	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	2.5e-54	67.48	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 10..159 e-value: 7.8E-54 score: 183.5
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 29..159
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 55..158 e-value: 1.5E-31 score: 108.5
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 45..159 score: 31.965553
None	No IPR available	PANTHER	PTHR11527:SF325	17.8 KDA CLASS I HEAT SHOCK PROTEIN-LIKE	coord: 1..159
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 53..144 e-value: 1.35495E-48 score: 150.148
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 1..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G03870.1	Clc07G03870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding