Clc07G03830 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G03830
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	17.8 kDa class I heat shock protein-like
Location	ClcChr07: 3944964 .. 3945443 (+)
RNA-Seq Expression	Clc07G03830
Synteny	Clc07G03830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACTCATTCCAAGCATTTTCGGTGGTCGCCGGACCAACATCTTCGACCCCTTTTCCTTAGATGTTTGGGATCCATTCGATGGATTTTCATTCTCAAACACATTGGCTAATCTTCCTTCCTCTGCCCCTGAAACCTCTGCTTTTGCCAACACTCGTATTGACTGGAAGGAGACCCCTCAAGCCCACATCTTCACAGCCGATCTCCCTGGAATCAACAAACAAGAAGTCAAAGTTGAGGTTGAAGAAGGCAGAGTTTTGCAGATCAGTGGAGAGAGAAGCAAAGAACAGGAGGAGAAGAACGACAAATGGCATAGAATTGAACGAAGCAGTGGGAAGTTCATAAGGAGATTCAGGCTGCCTGAGAATGCCAAAGTTGATGAGGTGAAGGCTAGTATGGAGAATGGAGTTCTGACTGTGACAGTACCAAAAGTGGAAGAGAAGAAGCCTGAAGTCAAATCCATTGAAATCTCTAGCTAA

mRNA sequence

ATGTCACTCATTCCAAGCATTTTCGGTGGTCGCCGGACCAACATCTTCGACCCCTTTTCCTTAGATGTTTGGGATCCATTCGATGGATTTTCATTCTCAAACACATTGGCTAATCTTCCTTCCTCTGCCCCTGAAACCTCTGCTTTTGCCAACACTCGTATTGACTGGAAGGAGACCCCTCAAGCCCACATCTTCACAGCCGATCTCCCTGGAATCAACAAACAAGAAGTCAAAGTTGAGGTTGAAGAAGGCAGAGTTTTGCAGATCAGTGGAGAGAGAAGCAAAGAACAGGAGGAGAAGAACGACAAATGGCATAGAATTGAACGAAGCAGTGGGAAGTTCATAAGGAGATTCAGGCTGCCTGAGAATGCCAAAGTTGATGAGGTGAAGGCTAGTATGGAGAATGGAGTTCTGACTGTGACAGTACCAAAAGTGGAAGAGAAGAAGCCTGAAGTCAAATCCATTGAAATCTCTAGCTAA

Coding sequence (CDS)

ATGTCACTCATTCCAAGCATTTTCGGTGGTCGCCGGACCAACATCTTCGACCCCTTTTCCTTAGATGTTTGGGATCCATTCGATGGATTTTCATTCTCAAACACATTGGCTAATCTTCCTTCCTCTGCCCCTGAAACCTCTGCTTTTGCCAACACTCGTATTGACTGGAAGGAGACCCCTCAAGCCCACATCTTCACAGCCGATCTCCCTGGAATCAACAAACAAGAAGTCAAAGTTGAGGTTGAAGAAGGCAGAGTTTTGCAGATCAGTGGAGAGAGAAGCAAAGAACAGGAGGAGAAGAACGACAAATGGCATAGAATTGAACGAAGCAGTGGGAAGTTCATAAGGAGATTCAGGCTGCCTGAGAATGCCAAAGTTGATGAGGTGAAGGCTAGTATGGAGAATGGAGTTCTGACTGTGACAGTACCAAAAGTGGAAGAGAAGAAGCCTGAAGTCAAATCCATTGAAATCTCTAGCTAA

Protein sequence

MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNTLANLPSSAPETSAFANTRIDWKETPQAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFIRRFRLPENAKVDEVKASMENGVLTVTVPKVEEKKPEVKSIEISS

Homology

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BLAST of Clc07G03830 vs. NCBI nr
Match: XP_011654976.2 (17.8 kDa class I heat shock protein [Cucumis sativus])

HSP 1 Score: 296.2 bits (757), Expect = 1.7e-76
Identity = 147/158 (93.04%), Postives = 154/158 (97.47%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNTLANLPSSAPETSAFANTRIDWKETP 60
           MSLIPS FGGRRTN+FDPFSLDVWDPF GF FSN+L NLPSSAPETSAFANTRIDWKETP
Sbjct: 1   MSLIPSFFGGRRTNVFDPFSLDVWDPFQGFPFSNSLPNLPSSAPETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFIRRFRL 120
           QAH+FTADLPGINKQEVKVEV+EGRVLQISGERSKEQEEKNDKWHRIERSSG+F+RRFRL
Sbjct: 61  QAHVFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFMRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEVKSIEIS 159
           PENAKVDEVKASMENGVLTVTVPKVEEKKPE+KSIEIS
Sbjct: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEIKSIEIS 158

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BLAST of Clc07G03830 vs. NCBI nr
Match: KAE8648011.1 (hypothetical protein Csa_021429 [Cucumis sativus])

HSP 1 Score: 296.2 bits (757), Expect = 1.7e-76
Identity = 147/158 (93.04%), Postives = 154/158 (97.47%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNTLANLPSSAPETSAFANTRIDWKETP 60
           MSLIPS FGGRRTN+FDPFSLDVWDPF GF FSN+L NLPSSAPETSAFANTRIDWKETP
Sbjct: 64  MSLIPSFFGGRRTNVFDPFSLDVWDPFQGFPFSNSLPNLPSSAPETSAFANTRIDWKETP 123

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFIRRFRL 120
           QAH+FTADLPGINKQEVKVEV+EGRVLQISGERSKEQEEKNDKWHRIERSSG+F+RRFRL
Sbjct: 124 QAHVFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFMRRFRL 183

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEVKSIEIS 159
           PENAKVDEVKASMENGVLTVTVPKVEEKKPE+KSIEIS
Sbjct: 184 PENAKVDEVKASMENGVLTVTVPKVEEKKPEIKSIEIS 221

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BLAST of Clc07G03830 vs. NCBI nr
Match: XP_038892388.1 (17.8 kDa class I heat shock protein-like [Benincasa hispida] >XP_038892768.1 17.8 kDa class I heat shock protein-like [Benincasa hispida])

HSP 1 Score: 291.6 bits (745), Expect = 4.2e-75
Identity = 145/158 (91.77%), Postives = 155/158 (98.10%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNTLANLPSSAPETSAFANTRIDWKETP 60
           MSLIPS FGGR++NIFDPFSLDVWDPFDGFSFSN+LAN+PSSA ETSAFANTRIDWKETP
Sbjct: 1   MSLIPSFFGGRKSNIFDPFSLDVWDPFDGFSFSNSLANVPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFIRRFRL 120
            AHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKF+RRFRL
Sbjct: 61  HAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEVKSIEIS 159
           PENAKV+EVKASMENG+LTVTVPKVE+KKP++KSIEIS
Sbjct: 121 PENAKVEEVKASMENGLLTVTVPKVEQKKPDIKSIEIS 158

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BLAST of Clc07G03830 vs. NCBI nr
Match: XP_038891783.1 (17.8 kDa class I heat shock protein-like [Benincasa hispida])

HSP 1 Score: 290.0 bits (741), Expect = 1.2e-74
Identity = 144/158 (91.14%), Postives = 155/158 (98.10%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNTLANLPSSAPETSAFANTRIDWKETP 60
           MSLIPS FGGR++NIFDPFSLDVWDPFDGFSFSN+LAN+PSSA ETSAFANTRIDWKETP
Sbjct: 1   MSLIPSFFGGRKSNIFDPFSLDVWDPFDGFSFSNSLANVPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFIRRFRL 120
            AHIFTADLPGINK+EVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKF+RRFRL
Sbjct: 61  HAHIFTADLPGINKREVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEVKSIEIS 159
           PENAKV+EVKASMENG+LTVTVPKVE+KKP++KSIEIS
Sbjct: 121 PENAKVEEVKASMENGLLTVTVPKVEQKKPDIKSIEIS 158

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BLAST of Clc07G03830 vs. NCBI nr
Match: KAA0051547.1 (17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYK21276.1 17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 287.0 bits (733), Expect = 1.0e-73
Identity = 140/158 (88.61%), Postives = 155/158 (98.10%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNTLANLPSSAPETSAFANTRIDWKETP 60
           M+LIP+IFGGRR+N+FDPFSLD+WDPF+GF FSN+LANLPSSA +TSAFANTRIDWKETP
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARDTSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFIRRFRL 120
           QAHIF ADLPGINK+EVKVEVEEGRVLQISGERSKEQEEKNDKWHR+ERSSGKF+RRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEVKSIEIS 159
           PENAKV+EVKASMENGVLTVTVPK+EEKKPE+KSI+IS
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDIS 158

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BLAST of Clc07G03830 vs. ExPASy Swiss-Prot
Match: P13853 (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 243.4 bits (620), Expect = 1.7e-63
Identity = 119/158 (75.32%), Postives = 140/158 (88.61%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNTLANLPSSAPETSAFANTRIDWKETP 60
           MSLIPSIFGGRRTN+FDPFSLDV+DPF+GF   + LAN P  A + +AF N ++DW+ETP
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFIRRFRL 120
           +AH+F ADLPG+ K+EVKVEVE+G +LQISGERS E EEKNDKWHR+ERSSGKF RRFRL
Sbjct: 61  EAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEVKSIEIS 159
           PENAK++E+KASMENGVL+VTVPKV EKKPEVKSI+IS
Sbjct: 121 PENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDIS 156

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BLAST of Clc07G03830 vs. ExPASy Swiss-Prot
Match: P27396 (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.1e-62
Identity = 119/158 (75.32%), Postives = 138/158 (87.34%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNTLANLPSSAPETSAFANTRIDWKETP 60
           MS+IPS FGGRR+N+FDPFSLDVWDPF  F    + A+      ET+AF NT IDWKETP
Sbjct: 1   MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSAS--EFGKETAAFVNTHIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFIRRFRL 120
           QAH+F ADLPG+ K+EVKVE+EEG+VLQISGER+KE+EEKNDKWHR+ERSSGKF+RRFRL
Sbjct: 61  QAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEVKSIEIS 159
           PENAKVDEVKA+M NGV+TVTVPKVE KKPEVK+I+IS
Sbjct: 121 PENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDIS 156

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BLAST of Clc07G03830 vs. ExPASy Swiss-Prot
Match: P05478 (18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 9.3e-62
Identity = 115/160 (71.88%), Postives = 139/160 (86.88%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNTL--ANLPSSAPETSAFANTRIDWKE 60
           MSLIP+ FGGRR N+FDPFSLDVWDPF  F F NTL  A+ P  + E SAF +TR+DWKE
Sbjct: 1   MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKE 60

Query: 61  TPQAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFIRRF 120
           TP+AH+F AD+PG+ K+EVKV++E+ +VLQISGER+ E+E+KND WHR+ERSSGKF+RRF
Sbjct: 61  TPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRF 120

Query: 121 RLPENAKVDEVKASMENGVLTVTVPKVEEKKPEVKSIEIS 159
           RLPENAKV++VKASMENGVLTVTVPK E KKP+VK+IEIS
Sbjct: 121 RLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEIS 160

[Close]

BLAST of Clc07G03830 vs. ExPASy Swiss-Prot
Match: P19037 (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.2e-61
Identity = 118/159 (74.21%), Postives = 141/159 (88.68%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDG-FSFSNTLANLPSSAPETSAFANTRIDWKET 60
           MSLIPSIFGGRR+N+FDPFS D+WDPF+G F+ S+ LAN  S+A + +AF N R+DWKET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALAN-ASTARDVAAFTNARVDWKET 60

Query: 61  PQAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFIRRFR 120
           P+AH+F ADLPG+ K+EVKVEVE+  VLQISGERSKE EEKNDKWHR+ER+SGKF+RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 121 LPENAKVDEVKASMENGVLTVTVPKVEEKKPEVKSIEIS 159
           LPENAK++EVKA+MENGVLTV VPK  EKKP+VKSI+IS
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDIS 158

[Close]

BLAST of Clc07G03830 vs. ExPASy Swiss-Prot
Match: P27880 (18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.6e-61
Identity = 118/159 (74.21%), Postives = 141/159 (88.68%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNTLANLPSSAP-ETSAFANTRIDWKET 60
           MSLIPS FGGRR+N+FDPFSLDVWDPF  F F+N+   L +S P E SAF +TR+DWKET
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSA--LSASFPRENSAFVSTRVDWKET 60

Query: 61  PQAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFIRRFR 120
           P+AH+F ADLPG+ K+EVKVE+E+ RVLQISGERS E+E+KND+WHR+ERSSGKF+RRFR
Sbjct: 61  PEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFR 120

Query: 121 LPENAKVDEVKASMENGVLTVTVPKVEEKKPEVKSIEIS 159
           LPENAK+D+VKA+MENGVLTVTVPK E KKPEVK+I+IS
Sbjct: 121 LPENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDIS 157

[Close]

BLAST of Clc07G03830 vs. ExPASy TrEMBL
Match: A0A0A0KP10 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G190530 PE=3 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 6.2e-77
Identity = 148/158 (93.67%), Postives = 154/158 (97.47%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNTLANLPSSAPETSAFANTRIDWKETP 60
           MSLIPS FGGRRTN+FDPFSLDVWDPF GF FSN+L NLPSSAPETSAFANTRIDWKETP
Sbjct: 1   MSLIPSFFGGRRTNVFDPFSLDVWDPFQGFPFSNSLPNLPSSAPETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFIRRFRL 120
           QAHIFTADLPGINKQEVKVEV+EGRVLQISGERSKEQEEKNDKWHRIERSSG+F+RRFRL
Sbjct: 61  QAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFMRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEVKSIEIS 159
           PENAKVDEVKASMENGVLTVTVPKVEEKKPE+KSIEIS
Sbjct: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEIKSIEIS 158

[Close]

BLAST of Clc07G03830 vs. ExPASy TrEMBL
Match: A0A5A7UAZ9 (17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold101G00300 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.9e-74
Identity = 140/158 (88.61%), Postives = 155/158 (98.10%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNTLANLPSSAPETSAFANTRIDWKETP 60
           M+LIP+IFGGRR+N+FDPFSLD+WDPF+GF FSN+LANLPSSA +TSAFANTRIDWKETP
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARDTSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFIRRFRL 120
           QAHIF ADLPGINK+EVKVEVEEGRVLQISGERSKEQEEKNDKWHR+ERSSGKF+RRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEVKSIEIS 159
           PENAKV+EVKASMENGVLTVTVPK+EEKKPE+KSI+IS
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDIS 158

[Close]

BLAST of Clc07G03830 vs. ExPASy TrEMBL
Match: A0A5D3BEM2 (18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G001020 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.9e-74
Identity = 141/158 (89.24%), Postives = 155/158 (98.10%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNTLANLPSSAPETSAFANTRIDWKETP 60
           M+LIPSIFGGRR+N+FDPFSLD+WDPF+GFSFSN+LANLPSSA ETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFIRRFRL 120
           QAHIF ADLPGI K+EVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKF+RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEVKSIEIS 159
           PENAKV+EVKA+MENGVLTVTVPK+EEKKPE+KSI+I+
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEEKKPEIKSIDIA 158

[Close]

BLAST of Clc07G03830 vs. ExPASy TrEMBL
Match: A0A1S3CIN2 (18.1 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103501408 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.9e-74
Identity = 141/158 (89.24%), Postives = 155/158 (98.10%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNTLANLPSSAPETSAFANTRIDWKETP 60
           M+LIPSIFGGRR+N+FDPFSLD+WDPF+GFSFSN+LANLPSSA ETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFIRRFRL 120
           QAHIF ADLPGI K+EVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKF+RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEVKSIEIS 159
           PENAKV+EVKA+MENGVLTVTVPK+EEKKPE+KSI+I+
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEEKKPEIKSIDIA 158

[Close]

BLAST of Clc07G03830 vs. ExPASy TrEMBL
Match: A0A5A7T3F7 (18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold278G00190 PE=3 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 6.5e-74
Identity = 141/158 (89.24%), Postives = 154/158 (97.47%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNTLANLPSSAPETSAFANTRIDWKETP 60
           M+LIPSIF GRR+N+FDPFSLD+WDPF+GF FSN+LANLPSSA ETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFDGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFIRRFRL 120
           QAHIF ADLPGINK+EVKVEVEEGRVLQISGERSKEQEEKNDKWHR+ERSSGKF+RRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEVKSIEIS 159
           PENAKV+EVKASMENGVLTVTVPK+EEKKPE+KSI+IS
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDIS 158

[Close]

BLAST of Clc07G03830 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 243.4 bits (620), Expect = 1.2e-64
Identity = 119/158 (75.32%), Postives = 140/158 (88.61%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNTLANLPSSAPETSAFANTRIDWKETP 60
           MSLIPSIFGGRRTN+FDPFSLDV+DPF+GF   + LAN P  A + +AF N ++DW+ETP
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFIRRFRL 120
           +AH+F ADLPG+ K+EVKVEVE+G +LQISGERS E EEKNDKWHR+ERSSGKF RRFRL
Sbjct: 61  EAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEVKSIEIS 159
           PENAK++E+KASMENGVL+VTVPKV EKKPEVKSI+IS
Sbjct: 121 PENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDIS 156

[Close]

BLAST of Clc07G03830 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 237.3 bits (604), Expect = 8.7e-63
Identity = 118/159 (74.21%), Postives = 141/159 (88.68%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDG-FSFSNTLANLPSSAPETSAFANTRIDWKET 60
           MSLIPSIFGGRR+N+FDPFS D+WDPF+G F+ S+ LAN  S+A + +AF N R+DWKET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALAN-ASTARDVAAFTNARVDWKET 60

Query: 61  PQAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFIRRFR 120
           P+AH+F ADLPG+ K+EVKVEVE+  VLQISGERSKE EEKNDKWHR+ER+SGKF+RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 121 LPENAKVDEVKASMENGVLTVTVPKVEEKKPEVKSIEIS 159
           LPENAK++EVKA+MENGVLTV VPK  EKKP+VKSI+IS
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDIS 158

[Close]

BLAST of Clc07G03830 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 236.5 bits (602), Expect = 1.5e-62
Identity = 114/158 (72.15%), Postives = 138/158 (87.34%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNTLANLPSSAPETSAFANTRIDWKETP 60
           MSL+PS FGGRRTN+FDPFSLDVWDPF+GF  +  L N P  A + +AF N ++DW+ETP
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGF-LTPGLTNAP--AKDVAAFTNAKVDWRETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFIRRFRL 120
           +AH+F AD+PG+ K+EVKVEVE+G +LQISGERS E EEK+D WHR+ERSSGKF+RRFRL
Sbjct: 61  EAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEVKSIEIS 159
           PENAKV+EVKASMENGVL+VTVPKV+E KPEVKS++IS
Sbjct: 121 PENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDIS 155

[Close]

BLAST of Clc07G03830 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 205.3 bits (521), Expect = 3.6e-53
Identity = 105/159 (66.04%), Postives = 126/159 (79.25%), Query Frame = 0


Query: 1   MSLIPSIF-GGRRTNIFDPFSLDVWDPFDGFSFSNTLANLPSSAPETSAFANTRIDWKET 60
           MS+IPS F   RR+NIFDPFSLDVWDPF   + S       S + E SA  N R+DW+ET
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSS-------SLSRENSAIVNARVDWRET 60

Query: 61  PQAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFIRRFR 120
           P+AH+F ADLPG+ K+EVKVE+EE  VL+ISGER  E+E+KND WHR+ERSSG+F RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFR 120

Query: 121 LPENAKVDEVKASMENGVLTVTVPKVEEKKPEVKSIEIS 159
           LPEN K+D+VKA+MENGVLTVTVPK E KK +VKSI+IS
Sbjct: 121 LPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQIS 152

[Close]

BLAST of Clc07G03830 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 202.2 bits (513), Expect = 3.1e-52
Identity = 106/162 (65.43%), Postives = 127/162 (78.40%), Query Frame = 0


Query: 1   MSLIPSIFGGRR--TNIFDPFSLDVWDPFDGFSFSNTLANLPSSAPETSAFANTRIDWKE 60
           MSLIPS FG  R   +IFDPFSLDVWDPF    F ++L+       ETSA  N R+DWKE
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSG------ETSAITNARVDWKE 60

Query: 61  TPQAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFIRRF 120
           T +AH+F ADLPG+ K+EVKVE+E+  VL+ISGER  E+EEK D WHR+ERSSG+F R+F
Sbjct: 61  TAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKF 120

Query: 121 RLPENAKVDEVKASMENGVLTVTVPKVEE--KKPEVKSIEIS 159
           +LPEN K+D+VKASMENGVLTVTVPKVEE  KK +VKSI+IS
Sbjct: 121 KLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDIS 156

The following BLAST results are available for this feature:

BLAST of Clc07G03830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654976.2	1.7e-76	93.04	17.8 kDa class I heat shock protein [Cucumis sativus]	[more]
KAE8648011.1	1.7e-76	93.04	hypothetical protein Csa_021429 [Cucumis sativus]	[more]
XP_038892388.1	4.2e-75	91.77	17.8 kDa class I heat shock protein-like [Benincasa hispida] >XP_038892768.1 17....	[more]
XP_038891783.1	1.2e-74	91.14	17.8 kDa class I heat shock protein-like [Benincasa hispida]	[more]
KAA0051547.1	1.0e-73	88.61	17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYK21276.1 ...	[more]

BLAST of Clc07G03830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P13853	1.7e-63	75.32	17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6...	[more]
P27396	1.1e-62	75.32	17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1	[more]
P05478	9.3e-62	71.88	18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=...	[more]
P19037	1.2e-61	74.21	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 P...	[more]
P27880	1.6e-61	74.21	18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 S...	[more]

BLAST of Clc07G03830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KP10	6.2e-77	93.67	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G190530 PE=3 S...	[more]
A0A5A7UAZ9	4.9e-74	88.61	17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3BEM2	4.9e-74	89.24	18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3CIN2	4.9e-74	89.24	18.1 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103501408...	[more]
A0A5A7T3F7	6.5e-74	89.24	18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Clc07G03830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53540.1	1.2e-64	75.32	HSP20-like chaperones superfamily protein	[more]
AT5G59720.1	8.7e-63	74.21	heat shock protein 18.2	[more]
AT3G46230.1	1.5e-62	72.15	heat shock protein 17.4	[more]
AT2G29500.1	3.6e-53	66.04	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	3.1e-52	65.43	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 55..158 e-value: 1.7E-30 score: 105.2
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 45..159 score: 31.7817
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 9..159 e-value: 1.0E-52 score: 179.8
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 27..158
None	No IPR available	PANTHER	PTHR11527:SF325	17.8 KDA CLASS I HEAT SHOCK PROTEIN-LIKE	coord: 1..159
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 53..144 e-value: 6.52964E-57 score: 171.334
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 1..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G03830.1	Clc07G03830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding