Clc07G03415 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G03415
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Unknown protein
Location	ClcChr07: 3391536 .. 3392669 (+)
RNA-Seq Expression	Clc07G03415
Synteny	Clc07G03415

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTCCACCGGATGTGCCGGTTTCGTGGTCAAACATTTTAGGATATATGTCTGTAAGAGGTTTTAGCCACTGTTTATGTTCTTGGTTTTTTCTTTTCTTACAAACTTCACAAAACAGGGGTTTTTCTCCTCTCCAATTTTTGTTTTACCCATTCAAATTAATTCTCATTTTCTTCTTTCAATTTCTTTCTTTGGGATTTGTGTTCTTAAAAAATTTCATGGATCTCTTCCCTTTTCCCCTCACCGGATTCTGGATCTTCCCTTTCAGTTTCCTGTAATTTTCTTACATTCTTCTTCTTCTTCTTCTTCTTCTTGTACCCTCTCTTAATTTGAAATCTCAGCTCGAATTTGGATCTTGGATTTGATTGAATCATTAAGATCCTTCTTCTACAGGTGAGTTTTTTTATTTATTTTTTGCCCAGAGATTTTCGGAGTTTGGATTTTGTTTTTTGGGTCGTGTTCGTCGGGCTGTTTGGTGCTCGCAAAATATGGGAATCTGTCTGGATTCTGCTTTTTTTCTCGATGGGTTTTGTGTTGTTTGTGACATTTCTGTCGGAATTTTGAACAATTGAGTCTTCAGAAATTGTTTGAAGTTCGAAAGCTATGATGTTGGGTTAAGATCGGATCCAGTTGAATTCTTTGAAATTGGTTTGGTTTCGGTTGATCCGATGCTTTCTGTTTGGTTTACAAGTTTCTTGAAGCAAGCAGCTTATGAATTGGGGGTTTTGATTTGTTGGTTTCGGAAATGGGTTTTGATTCGGAATTCTGAATTTTGGCTATTTTCAGTGGAATTAGAGGTTTTTCATTTCTCTAATCAAGTTTCTTTTGTCTCAACCATCGATATATGATTGTGACATTGAAATTTTGAATGTTCTTTGATTTTTGCTGACAATGTGAATTTTGGCAACTCTTCCTTTGTTTAGATGGGGTTTAACAAGGGAAAAACATAAGATCATTGCTTTCACATTGTTGTTGTAAAGCTAATTGTATTATCCTTTTCGTCGTATTCATATTCGTGTATGATGGTTTTGCTGTATAGAGTTTCAAATTTGAATGATTTTGGTCTGTTGTTTTGATGATTGGCAGCATAACTGGCGAATCTCTGTGTTTGATGAGTTTTTGTCGCAATGA

mRNA sequence

ATGGCTGTCCACCGGATGTGCCGGTTTCGTGAGATTTTCGGAGTTTGGATTTTGTTTTTTGGGTCGTGTTCGTCGGGCTGTTTGGTGCTCGCAAAATATGGGAATCTGTCTGGATTCTGCTTTTTTTCTCGATGGTTCGAAAGCTATGATGTTGGGTTAAGATCGGATCCAGTTGAATTCTTTGAAATTGGTTTGGTTTCGGTTGATCCGATGCTTTCTGTTTGGTTTACAAGTTTCTTGAAGCAAGCAGCTTATGAATTGGGGGTTTTGATTTGTTGGTTTCGGAAATGGGTTTTGATTCGGAATTCTGAATTTTGGCTATTTTCAGTGGAATTAGAGCATAACTGGCGAATCTCTGTGTTTGATGAGTTTTTGTCGCAATGA

Coding sequence (CDS)

ATGGCTGTCCACCGGATGTGCCGGTTTCGTGAGATTTTCGGAGTTTGGATTTTGTTTTTTGGGTCGTGTTCGTCGGGCTGTTTGGTGCTCGCAAAATATGGGAATCTGTCTGGATTCTGCTTTTTTTCTCGATGGTTCGAAAGCTATGATGTTGGGTTAAGATCGGATCCAGTTGAATTCTTTGAAATTGGTTTGGTTTCGGTTGATCCGATGCTTTCTGTTTGGTTTACAAGTTTCTTGAAGCAAGCAGCTTATGAATTGGGGGTTTTGATTTGTTGGTTTCGGAAATGGGTTTTGATTCGGAATTCTGAATTTTGGCTATTTTCAGTGGAATTAGAGCATAACTGGCGAATCTCTGTGTTTGATGAGTTTTTGTCGCAATGA

Protein sequence

MAVHRMCRFREIFGVWILFFGSCSSGCLVLAKYGNLSGFCFFSRWFESYDVGLRSDPVEFFEIGLVSVDPMLSVWFTSFLKQAAYELGVLICWFRKWVLIRNSEFWLFSVELEHNWRISVFDEFLSQ

Homology

The following BLAST results are available for this feature:

BLAST of Clc07G03415 vs.


Match Name	E-value	Identity	Description

BLAST of Clc07G03415 vs.


Match Name	E-value	Identity	Description

BLAST of Clc07G03415 vs.


Match Name	E-value	Identity	Description

BLAST of Clc07G03415 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..23 score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G03415.1	Clc07G03415.1	mRNA