Clc07G03400 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G03400
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	ClcChr07: 3373964 .. 3385324 (+)
RNA-Seq Expression	Clc07G03400
Synteny	Clc07G03400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAACAACAAGAATGTTCCAAGCTTCTCTTTCCAATATGCAAGTATTGATCAACCTGAAGATACTTTTATCAACACCATTGAATATGGTATTAAGAGCACGAGAATTGCCAGAGAGGCCTCATCCTCAATTTCAGACCAGTCAATTTCAGGCTTGAGTTCCTTTTCACCTTTTACATTGGTGACTTGGGGATGGGACCACCCAACAATAACCGATTTTCATGATTTGTTGTGAAGAGATTTCAAGAAAGCTGTCATTCTCACCTTCCAGTAAGAGTAGTTTGTCCCATCCAACACTAGGGGGAGGGGGGTGTGGTAGATCCTCCTTCCTTTATTCCCTCCATGGAATACTAACAGGAACAGAACACCAGAAGATGGTGACCCTCTCTAATACCAATTGAAAAAGGTAAGAACTACCTACGACACAAGTAACTCTATCACCAACACTGTCACACAAATACTCAAAACAAATAACAACAGTAATAAGCCACACAGAAACACAAAAGGTTGTTAACCCAACTTGGTGCAATATCACCTACGTTTAAGGGATAGCAACCCAAGAAAGATAACTTCACTATTAATAATGTTAAGCAATTACAATGAAGTACTTATTTAAAACTATGACAATTATAGTGACTCCCAAAAAGCTTAACATTCAATCCTTCATCTAGGCTCCCCCTAGAAAAGCGAATCCCTCACTGGAAGACTAAAGTTCTCCCTAAGAAACAATAATAGTGAAGTATGTCTTAGGCTCCCCTAAGACTAAGACTCCTTCTCAACTACGTTTATCTTTCCACTCAAGTTACGACCCCTCGACTCCTTTATTCGATTTTGTTTAAGCTCCCCCTAAGCTTAGGATCGTCTCCCTCAGAAGACTTCGAGTGATGCAAAACAAAATGGCTTGAAGACAGGATCTAAGAACAAAATGGCTTGAAGATAGAATCCAAGTATACAGTACAAATTTTCTGAATTATCAAAATAATCGCAACGACACTCTGTATGCTTTTCTCCAGAAAAATTTAGTGACGCAGACAAAAGCAAAGAAACATTAAAATACACGCAGCGGACCAACAAAACGCAACCCTAACTTCCATAACTAGAGTGCATGACAAAGTAAAAATATATGTAAAAGATACTACACCAGAAATATTTCCTTAAAATTTCCAAATAAGGAAAGATTTCGCAGGAAAGTCATTTCGAAAAACATCCTTAAAACATACAAAGCAAAAGTAGAGACACAATAAACAATATCAGAAAGCTTTAAACAAATATTGCAAATACAAAACACGTAATAGAAGAAACAAAACAACACCTTTTTTCTTTTTTTTTTTTTGTTACTTATATATAATCAACTCTAACTAAACCATTATTTATTTATTTATTAATATTTGAACATGATCGAACGATACAATTTATAAAACTAAAATTCACGTTGGTTCGATTTTCCTTTTAAAAAAAAAAGAAAAAAAAATGCCATTTTGCCTGTCGGTTGTGCACCTTTAGACCCTATTGCAAATAAAGATTTGAAGAAAAAGTAGGAAGAGAATAGTAAGTAAAAGCGTATATGAAAAATAAATATGTCATACAAGACAAAAATATTGCTAGTTTATGCCAACATAGTTTTATGTTACAATAGGAAATTTTTGGTGCACAACATTAAACTTAGCTTAGCAATAGTGGTTGTACTAAAAAACACGATATAATTAAATGAATTTAAGTTCAAAATAAACAGCTCCATAAAAAAAATGTCGATAAAATATTGATGATGTAAATGAATATTTCAAAAAATTTATAAGAAGAAATAAAAAACATTTTACACTTTTTAAATAATTTAAAATCTTTATTATTTATATTATCTTTATGGTTTATTCTCCATATTTCATCAAAATTTTGATATAACGACAATGTCGATACGCTACTCAAACTCATAATATTGAAAATATTGACGTGTTGATAAAAATTAAATATCTAGATTGTGCATACTTTCTTTTTTTTCTTTTTTTTTTTTTTTTTTTGTTAAATTTCATAAATAAAATAATGATGAGATGAAGTATGTGAAGTTGGGCCTTTTAAGTTACTTCAAAATGATTTTCAAGGCTTGGGCCTACCGAACAAATTTCTCTTGGATCTATATCCACTAGAATACTAAATACACAATTTTCCCAATATGCATTTTTTAATTGTATGGTTAAATTACGGATACTATTAAATAACCTTTTCATCTACATATTTTAGATTTTGTTCAATTTTAATCATATAATTTTACACGTCTAATTTTAGTCCTATAATTTTAATAAATTTTTAAATTTAATCCTTTAAAATTTATTTTATTTAAAATTTGCTAAAATCATTACACTAATTTTCATGCAAGAAAAATACTATATGTGATTATGTTTCCAAAATTTATCGTGAAGATAAGTTTTTGATAAAACCAACAATAAACCAATAGTATATATCAAATTTAAGTTTTATTGAAACTACGTATATAAATTAAAATTAGACGATAATGATATTTTAATCCCTAACCGTGACAACTACATTATATATATTCAAGATTCTAACGGTTAAATCTTTATTAAAAACCAAACTCACTCCTTGCCTTTTATTTTGTTTTGATTTTTTTTTTTAGTGTCCAAACTCACTAGTTGTTAATGTTAGTGTTCAAAATAAATTTTTATCAAAAAAATAAGAAATAATTAAAACACTTGAAAGTTTAAATACCCAAATGAAATAAACACAGACCAATCGAATAAATAGTTATTTTTTTCTTTTTTTTTCATAATTAGAGGGATATATACTTTGAATCTATAAACTTAAGCCAAGAACACTAAACAAACTTTCCACACAAAAGTTCAAATAGTATAGATGAATAATATAATAGAATCTAAACTTATTATAATAATGTTTTATGATAAAATGGTAAGTAGAACTTAGCTGAACTACCCCCTCCCATTTTCCCCTGTCATAAGGCTCTGTTTGGTGAGAAAGAAAGAAAAAAAGAAAAAAAGAAAATCAATCTCTTTTTAAACACTTCAAAATACAATTTCTATTCCATGAAACCTTGTTTCAATGGCCCTTGCAGATCATCATCAGAGAATCCACCCAGTTACAGATGTTGAACCGCCACCACCGCGGTCAGCTCCGCTGCTAAATCGTCCCTCGCCATTGCCGGGAAAGGATGGCCAACACCAAATTCTCCCTCCAAAAAACAGAAGATCTTGCCTTTGCAGATGCTTATGTTGCACATTCTGTGTTATTTTACTTCTTCTTATCATCGTCGGAGCCGTCGTTGGAATTCTCTATCTTGTTTTCAAGCCCAAGATTCCGACGTTCTCCATCGACTCCTTGAACATCAACGATCTTCGACTTAATTTCGACATGTCACTCTATGCCAGGTTTTTGTTCAATATACTTAACAAAAAAAAACATTTTCTTCCGTGTAACATGGAGATTTAAACAATCGTCTACAAGTTTTATGGTCGTTAACATATATATTATATGTCAATTTAGAATACAGGAAATTAAGTTTAACGTTTTATTGTTGTTTTAGATCCCCCTATAACTTTCTATTTTGTTTTTTTAAAAAAGTTTAATGCAAAGATGCATGGTTGTTTCGATATAATCTTAAATTAACGCTTGCTTTAATCTTAAATTTAATTTCTTGATTAGGTGATTGTTTTTCTTTGACGAATTTATTTCCAAAATCATTGGTTAGAACTTGGAAATAATATTTTTAAAACATCATTTAAATCTTTTCAATTCTAAATTTTGCTAACAAATACATATTAAAAAACAACAAAACAAAATCATTTTATTATCTTCAAATTTTTGTTTCCAGATCGCTTATCAATTACTATTAATTCATATTTTAACAGGTTCGACGTGAAAATCACGACATACAACCCGAACCAGAAGATCGGAATATACTACGAAAAGGGAGGAGTTTTGAGCGTTTGGTACACAGAAAACAAGCTTTGTGAAGGGTTGTTGCCGGTGTTCTACCACGGCCACCGGAACAAGACGACGTTGGACGTGGTTTTGACCGGAAGGACGGTGTATGGAAGCACTTTGATGGCGGCATTGGTGGAGCAACAGCGGACCGGCCGCATTCCGCTGCAGCTCCGGGCGGTGGCGCCGGTGGCCGTGAAATTGGGGAAATTGAAGCTTAAGAAAGTTAAGATTTTAGGGAATTGTTTGTTGGTGGTGGATAGTTTGACTGCTAATAATGCCATTACTATTAAAGCTAGTAATTGTAAGTTTAGGTTAAAGCTTTGATTTTTATTTTTTATTTTTCCCATTTGGAATGGAAAATTCTCTAGGGATTTTCAACACTTTTGTTAATTATTATTATTTTTTAATTTTAATATGGTTATTTGTATTTGAGTGTTTTTGTGAGAGTAGGAATTTAATTATATGGATTATATGTTATATACAGATTCTAGAGGGATATGTTTTTCCCCATTATTTTCATTTTCATGTCATGTATCATGATCAAGACATTTTTAATTTTGTCTAGATTTAAATCTTGTGTTTATTTTTTAAACTTTCAAGTGTTATTTTTCATTATTATTTTAATTAACAATAATGTCTACAATAAATTTTGAGACTAAATTTAGAAACAAAAAAAAAAAAAAAGAACAAAAAAGACATGAGCTCACATTATTATTTTTTTTTCTTTTCTTTTTATGGTTGAGTTTTTTTTTTTTTTTTTTTTGACAATTCTAAATTATTGTAGAATATTATGAACTAGCCACATTAGTTGCTTTACTTATGGTTGTAATTTCAACTTTTCTCTTTCATTTATATTATTTGTAAAAATAAAAAAGAAAAAAGAATGGGCAGTGAGTATTCCAATTATTATCATCTAATAAATGAAGAGTACTTGGGTTAAAAGAAAATTAGGGTGAAAAAAGAAAAGAAAAAAAAAAGAAAGAAAGAAGAAATTAACCATTCATTGTCGACGTTAGACTCAAAGAAATATAAAAACATCATCGATGGATTGATTGTCAACATGTTGAAGAGAATTTAATACTTAATAATTTTGAATTTGCATTTAGATGTATTTTTTAATAGTATAGAATAAGTTCATCTACTTATTAAAAATGATTTTAAAAAAAATTCTAGAAATTTATGAAGAATTCAAATGTGTTTTCTCTAATTCAATAAATCAATATAAAAAATAGTAAACATAGTTAACATTAAGTAAAAGTTAAAATTGTTGACAAAGAGGACCATTATATAATAGCATTTGGTTTTAGAGAGTAGAGTCCATAGAATGTGGTTGAATATTTAATATATAATATATTGTTATTATTTAAATTTAAATTTAACTATACTAAATTAAGCCACAATTAAAGTGACATACTAAACTCATGTGAATTTTTAAAATACTTATAAATTGTACTAACTACTGATTAATTTAAATACATTAGTTAACTTTAAGAATTAAGTAAAGAAGTGGTTTAAACAACTCTAATCCCAAAAACTAATATATATTCACATTGGAAATTTCAAAGGGCAATCATACTTGCCTTCTGTTTATATAGTAAAAGCCTCAACCACAGTCATTAAAAGCAACTAATTGAGGAATATTATTTTAAGGATTAAAAAGATAAAGATAGCTTTGGTCCTTCCACCTATTTCTAAAGTAAAGAATCAACTTCCAAACTTAGGAGTAATAATTTTTTGTTTTTGGTTTCTAAAGTTTGTGTTTATTTCTCTGTAATTTCTTATTTATGATTTTATATTTCCTATGTAAAACATTAAAATTAAAATTAAGTTAAATAAAAAATTTAGTTCTTAAGGGTTTAATTAGAATTTAATATATATATTAGTTTGATAAAACATTTATAAATAGTCTCTACGACATGAACTATTTATGAGGATTTTATCAAATATAAGGACTATTTATGAGGTTTTACTAAATTATAATGGTTAATTCTAACTTAAATCATATTAACCAAATTAAAAAATTATAGTTTAACTTTACATATATTAGCCAATTTTTGAAAAAAAATAAGTTTTTTAAAATTATTTGTTTTAGTTTTAAATTTTGGTTTTGATTTTTTAAAACACTTGTAAAATATACATAATAAAATATAAAACAATTAATAAAAATGTTTATAGGCTTAATTAAAAAGAAAAAAAAAACTAAAACTCAAATAGTTACTAAAGTAGTATCTTAGTTTATCCTTCAACGATTTAATCTCCAAAAAAAAAAAACATTTAACATTTGTAACAAGTTATTATTTTATGTCATAAAAAAAATTATCTATAGTTGTAATGAGAGACGTTTCTTTCACGCATAGATAAGTTATTCGAAGTAAAATGTGTTTTTAAATTAGGGGAATAAAAGGTGTTTGTGCCAAAGAGTGGAGTTGGAAGGTAGAGTTGTGAATTTCACCCTTTATTTAGTGCCCCCACTTCTAAAATACATCCATTTATGTTTTATTAACTCATTACACGGTGGGTCCCACAAATTTACAATTTCTAGAACTTCAAAACTTTACTTCTTTCCCCCACACACTTTGAATAGTTTTTTTTTTAAGAAAATCTTATAAGATACGACTAAAACTAAAGTTTAAAATGTTAATGTCAACGAAAATATCGATGCCCTAATTTTACGAAAATATCAATGGAAATAACGATGAAATGTAGATTCCAATAGATATTTCTGAAAAAGTTATAAAAACAAAAAATTAAAAGAAAATTTAATTAGTAAATAAACATTTTATGATTTTTAAACAAGTTAAGATGTTTATTTTTTATATTATATTTACATTAGTGACAGATTATTTTTTATGTTTCACAAATTTTTCTACGATATAATAAAAATTTTGATTCACCTCTCATGTAGACATCAAACTTATGAAAACATGCAAATATCGATAGAAATATCGAGATGTGGACTAAAATTTAATGTTATGCTAAAACATTGTATACTAACATTTATCTAAATTATTACCATTTAAAACTATGATAAGGAAAAAAGCATGACCTCAATAAAAAAAAATACTACTTAGCCAAATTCTTTATTTCTAACCACTTAGAATAAAGATTTGCCAAAACATATTCGAATAACACTTTCTTAGAAAGAATTGAATTTTTTTTTTTTTTTTTAAATTTTAGTTAGTTTGTTTTACTCGTGAATGGGTAACCATTTTAATTTTAGTTTGAACTTTTTTTTATTTTTTCTCTTAAATTTTTCATATGACTTTGACATTTCTCTGAGAAAATACTCAAATTTTTAGTAAAATTCTAAAAATACGAAATTTATTCTTTCTAGTTTTCACATCTTGACTTGATCTTCTAAAATATTGGTGAGAAATGGATAAAAGAAAATAAATCTTACAGGTGGAAATATGTTTATAAGTTTATTTTTAAAAATCAAAATCAAATAGATATCACATGGCTTTTTTTAATTAATTTATTTATTTTTTTTATTATTTTTTTATAATAGTTTGTTTTCTTACAACCTCTCTATCATGGGTTTCATCTTTTATGGATATACATTTGTATTTTTAGCTAAATTCTAAACACAAAAATAAGTGTTTAAAATTTAACCTACTTTTTTAGTTTTCAAAACTTTGTTTCTTTCTTAAAAATACTCCTACAAAGTAAATAGCAAAATAAAGATTCAAAAACCAAATCGTGATGTAATGAAGGTTTAACAATTAAGATGTCCAGTAAATTACCACTACACCCTGAATTGATATGCTAAAGATTATTTGTTTCGTAATGATACACGAAGTCAAGAGACTTATAAAATCGTGCAATGGACAAACTTTCAATTTTCATAATTCATTTAATGATAAATTTTTTTAGGATAATGTAAGGAAATTAAGGTCTAAATAATAAAGAGTTTGAGTGATGATGATGCAAGGAAGGTGTGGGTATGGATTGAGTGTAAAAGGTGTGTTCTTTAGGCTCAAGAAATTGGCACATTGATTGGTGGGATCAAGTTGTAGGGTTTTTTTCTTTTTAATATTCCCCAATATGCATCTTTCAACTATTTGATTTCTTTTAACACAAGTTAAAAGGAAGAAAAAAATCATTTCTATTCATGAAATAGCTTCCATTTCTCTTTTTGGATTATTTTATAGATAAAGTAAAAATATATTAAGCATTTGATTGTTAACACAATCATACATCTGTTAATTGACTTAAGATTATATTATATAGTTTTTGGTGTTAAAGAGTTAGATCTTTATAACTCAAAATTAATAAATCAAATCTATATTTTACATATGAGTTTGTTTATTTTAGGTTAAATTATATATTAAAAAAATGTCCTTCAATTTTGTTTATTTGTTTAAAAAATACTCATATATTTTCAAAAGTAAAAACATTACCTCTGAACTTTCACAAATGTTCAAAAGTAATTTTGGAGTAGAAATTCTTCAGAAATTTGGACGAAAATTGATATGAAATGGTGTTTTAGTGATCTAAATAGAAATTTAGATTGCGACATCGTTATAGGTCATTGCTACATAGTTCTAAATCTTGATTTTTGTTCAAAATTTTAAGGAATTCCTATTACAAAGTAATTTTGAAACGTTTATGATAGTTTAAGGACAATGTTACAATTTTTAAAAATATAAAAGTATTTTTAAAATAAATTACAAAATTTAGAGGTATTTATTACAATTTAACATTTATATACCATTTATGATAACAACAGTCATAAATTCTTATTTAATTATCAAACTTTCATGTGTATATGTTTTTTTTTTTTTTTTTTTTTTACAAATTATAAATCTAAAAGCTGAATGATGCCCAACGGCAAACATTTTTGGCTTCAACTTAATAAATTCAAATTTTATTAAAGTAGCAATTTACAAGTCAAATATTCGATAAAATTTATTTAATAATAATATTAAGATGTTAGTTTAATATGCCACAAACATAATTCAACATACTATTTGTATTTAACTTCAAAGTCAAATATTCAATTTCTACTTTAACTATAGTATATATATATCTATATGAATTTGAATTATTTTTAATACACTTTTGAAAAAGTAATTATTTTGATTAAAAAAGTAATGATTATCGATAATGACAATCCTTCTTTGCCCATAATGTGGCTTAAAATAATGGTAAGTGGTAATTTGTAATTTAAAAAAAATAAAAATATCTGACTATAATATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATTATCATGACCAGCTTTAGGTTTTTTAATATATGCAACCGACAAATCTCATTGATGGATCTTATAATTGGCCAATGAGATGACTCTCCAACTATTTTATTTAATACTCACACCACTAATTATTTTAATCAAATTCATTTTCAAACAATCATATTGCACCCCAACCATCCAATGTCCTTTGGAAAAAAGAAAAACATATTTATTAATTAATCATTTATAAGCTAAATTATATAAAAATACCTTACAATTTTAGAGAAAATTTCTTTGGTTAAAATAAAATCAAAATTTGCATGTTAAGATTAAAAGACAAATATAAATATCGTATACATAAATTGACATGATAACTAATGTATAAAAATTGACTATCGATATTAGAAGAAATAAATAGTAATATATATATATATATATAGTTGTAATTAATATCACGTGTGTCTTTGAATTTTTATTCATTAGCTACCATATCAATTTCCATCTTTTATTTTAATAAAATTTATTTTTTTCAAAACAACTTCAAAGTTTAAGGTTCTTTTAAACAAATTTCAAATTTCAAGATTAAAACGAAAATGTCAAATTTTAAAGGACATAATTAAAATTTATTCCCTCCAAAGCAAGCAAAGCTCAATTGGCATATATTATGTGCTAGTGACCAAGAGGTCTATAGTTTGAATCTTCAATTCTAACGAGAGAAAAAAAAAAATTAATCTCAAAGTTTACAAGTTATTTGGTATAATTTAACCATCCTCTATATACATAATTTTATTTTCCCTCTATTACTTAATCATTGTAAATGTGTTGTTGGTATATATTAATATTGCTCTTTATTATTACCTCTTTTGTCTTCAAGAGTTAAAAGCACATAGAATTTTAGCTCTTCTCTCTAATTTTTAAAACTTCTTCAACTTGTTTAGGAGTAAAAATTATTTGGGAAAGTCATCACAATGTGACGAAAAATTTAGTATCCAATAGTTATTATTATTAGAGACATACATATTTTTTTAATCTACATCCAAGATTATCAAAAAGCAGTCAACAATAATACAAGGCATACTCGTTCATTAATTCTTTCCTCAAGAGGGAGTCATCTCCAACATCCACACCTTACGATATGTGGGAAAGATCCCAAACGAATCTTTAGATGCATTGAAATTTTGATAAGGTCTTATGATCTAAAGGGTAGTGATTTATGTTACAAATTTACAAATACAACATGGAAAGATTCTGTTCATAACAATATTTTTTTATTCATGTACATTTAAAATCAATGGGTTTATTTGATTACTTTTTTGCAATATAAAATTTAAAAAACAAAAGAATCCCATTCTTTAAAATATTAATATTGTTTGTACTTATATAAGTGGAAACAATGCATTTAAACTCTCTTATAAAACCCCACCTCATAGTTGGACTAAGTTTTGTATAAAACATTAAGTCTCACACATATGATATTGCTCTCATTTTTGCAATTAAGCAATCAATTAAACTTTGTTTTAAAATTAGATTCATAATCTCTCATACAAAGGAACATATATTACTGAAAGATTAATTTAATAATTAAGTAGCTAATTTTTTGTTATTAAATTATATATAATTAATTAAGGAGGAGACTTTAGGAATGACACTTTTTTAGGAACATAAGAAATCTGTCTCTCAATTCTTTTACATCTATAAAAAATTTAGACCATGAACTAGTGAGAATTTTTCTCGTGACAATTTTTTTGTTGATTATTCATTAGGGTTGGCAAAAAAACTTGCAGGACTGGGTCCCATTCGGGTAGGAGAATCTCCTGTTTGACCAGGCACGGGAGTCAAACCGGGGAGATTCCCTAGGTACCCGTCTGAGGTTGGGGCGGGGACGGGGACGGTATCCCCGGCCCTTCCCCGGCCTCGACCCCACCCCGATATATCCCCGATAACCCCCCGTTTATATATATATATATATAAAGATGTTTCGCTCAGTCGCTCCTTGCTGCTTCTGTCTCGCTCTCGCTCTCGCTCTTGCCCTCTCTGTCTTTCGTTAGCTCTGTCTCTCACTCTCTCTCAGTCTTGCTCTCGTTGTCTCGCTCTCGAGGAATGGGTCCTTGCGGGGACCCGTTTCCCCAGCGGGGATGGGAGTAAATTCTCCCTGTTCCCTATCCCCACCCCACCCTTATTGTCAACCCTATTATTCATCCCTTCTTGA

mRNA sequence

ATGAGCAACAACAAGAATGTTCCAAGCTTCTCTTTCCAATATGCAAGTATTGATCAACCTGAAGATACTTTTATCAACACCATTGAATATGGTATTAAGAGCACGAGAATTGCCAGAGAGGCCTCATCCTCAATTTCAGACCAGTCAATTTCAGGCTTGAGTTCCTTTTCACCTTTTACATTGAACTTAGCTGAACTACCCCCTCCCATTTTCCCCTGTCATAAGGCTCTGTTTGATCATCATCAGAGAATCCACCCAGTTACAGATGTTGAACCGCCACCACCGCGGTCAGCTCCGCTGCTAAATCGTCCCTCGCCATTGCCGGGAAAGGATGGCCAACACCAAATTCTCCCTCCAAAAAACAGAAGATCTTGCCTTTGCAGATGCTTATGTTGCACATTCTGTGTTATTTTACTTCTTCTTATCATCGTCGGAGCCGTCGTTGGAATTCTCTATCTTGTTTTCAAGCCCAAGATTCCGACGTTCTCCATCGACTCCTTGAACATCAACGATCTTCGACTTAATTTCGACATGTCACTCTATGCCAGGTTCGACGTGAAAATCACGACATACAACCCGAACCAGAAGATCGGAATATACTACGAAAAGGGAGGAGTTTTGAGCGTTTGGTACACAGAAAACAAGCTTTGTGAAGGGTTGTTGCCGGTGTTCTACCACGGCCACCGGAACAAGACGACGTTGGACGTGGTTTTGACCGGAAGGACGGTGTATGGAAGCACTTTGATGGCGGCATTGGTGGAGCAACAGCGGACCGGCCGCATTCCGCTGCAGCTCCGGGCGGTGGCGCCGGTGGCCGTGAAATTGGGGAAATTGAAGCTTAAGAAAGTTAAGATTTTAGGGAATTGTTTGTTGGTGGTGGATAGTTTGACTGCTAATAATGCCATTACTATTAAAGCTAGTAATTGCACGGGAGTCAAACCGGGGAGATTCCCTAGGTACCCGTCTGAGGTTGGGGCGGGGACGGGGACGGTATCCCCGGCCCTTCCCCGGCCTCGACCCCACCCCGATATATCCCCGATAACCCCCCGTTTATATATATATATATATAAAGATGTTTCGCTCAGTCGCTCCTTGCTGCTTCTGTCTCGCTCTCGCTCTCGCTCTTGCCCTCTCTGTCTTTCGTTAGCTCTGTCTCTCACTCTCTCTCAGTCTTGCTCTCGTTGTCTCGCTCTCGAGGAATGGGTCCTTGCGGGGACCCGTTTCCCCAGCGGGGATGGGAGTAAATTCTCCCTGTTCCCTATCCCCACCCCACCCTTATTGTCAACCCTATTATTCATCCCTTCTTGA

Coding sequence (CDS)

ATGAGCAACAACAAGAATGTTCCAAGCTTCTCTTTCCAATATGCAAGTATTGATCAACCTGAAGATACTTTTATCAACACCATTGAATATGGTATTAAGAGCACGAGAATTGCCAGAGAGGCCTCATCCTCAATTTCAGACCAGTCAATTTCAGGCTTGAGTTCCTTTTCACCTTTTACATTGAACTTAGCTGAACTACCCCCTCCCATTTTCCCCTGTCATAAGGCTCTGTTTGATCATCATCAGAGAATCCACCCAGTTACAGATGTTGAACCGCCACCACCGCGGTCAGCTCCGCTGCTAAATCGTCCCTCGCCATTGCCGGGAAAGGATGGCCAACACCAAATTCTCCCTCCAAAAAACAGAAGATCTTGCCTTTGCAGATGCTTATGTTGCACATTCTGTGTTATTTTACTTCTTCTTATCATCGTCGGAGCCGTCGTTGGAATTCTCTATCTTGTTTTCAAGCCCAAGATTCCGACGTTCTCCATCGACTCCTTGAACATCAACGATCTTCGACTTAATTTCGACATGTCACTCTATGCCAGGTTCGACGTGAAAATCACGACATACAACCCGAACCAGAAGATCGGAATATACTACGAAAAGGGAGGAGTTTTGAGCGTTTGGTACACAGAAAACAAGCTTTGTGAAGGGTTGTTGCCGGTGTTCTACCACGGCCACCGGAACAAGACGACGTTGGACGTGGTTTTGACCGGAAGGACGGTGTATGGAAGCACTTTGATGGCGGCATTGGTGGAGCAACAGCGGACCGGCCGCATTCCGCTGCAGCTCCGGGCGGTGGCGCCGGTGGCCGTGAAATTGGGGAAATTGAAGCTTAAGAAAGTTAAGATTTTAGGGAATTGTTTGTTGGTGGTGGATAGTTTGACTGCTAATAATGCCATTACTATTAAAGCTAGTAATTGCACGGGAGTCAAACCGGGGAGATTCCCTAGGTACCCGTCTGAGGTTGGGGCGGGGACGGGGACGGTATCCCCGGCCCTTCCCCGGCCTCGACCCCACCCCGATATATCCCCGATAACCCCCCGTTTATATATATATATATATAAAGATGTTTCGCTCAGTCGCTCCTTGCTGCTTCTGTCTCGCTCTCGCTCTCGCTCTTGCCCTCTCTGTCTTTCGTTAGCTCTGTCTCTCACTCTCTCTCAGTCTTGCTCTCGTTGTCTCGCTCTCGAGGAATGGGTCCTTGCGGGGACCCGTTTCCCCAGCGGGGATGGGAGTAAATTCTCCCTGTTCCCTATCCCCACCCCACCCTTATTGTCAACCCTATTATTCATCCCTTCTTGA

Protein sequence

MSNNKNVPSFSFQYASIDQPEDTFINTIEYGIKSTRIAREASSSISDQSISGLSSFSPFTLNLAELPPPIFPCHKALFDHHQRIHPVTDVEPPPPRSAPLLNRPSPLPGKDGQHQILPPKNRRSCLCRCLCCTFCVILLLLIIVGAVVGILYLVFKPKIPTFSIDSLNINDLRLNFDMSLYARFDVKITTYNPNQKIGIYYEKGGVLSVWYTENKLCEGLLPVFYHGHRNKTTLDVVLTGRTVYGSTLMAALVEQQRTGRIPLQLRAVAPVAVKLGKLKLKKVKILGNCLLVVDSLTANNAITIKASNCTGVKPGRFPRYPSEVGAGTGTVSPALPRPRPHPDISPITPRLYIYIYKDVSLSRSLLLLSRSRSRSCPLCLSLALSLTLSQSCSRCLALEEWVLAGTRFPSGDGSKFSLFPIPTPPLLSTLLFIPS

Homology

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BLAST of Clc07G03400 vs. NCBI nr
Match: XP_011656174.1 (NDR1/HIN1-like protein 6 [Cucumis sativus] >KGN50557.1 hypothetical protein Csa_021461 [Cucumis sativus])

HSP 1 Score: 397.5 bits (1020), Expect = 1.5e-106
Identity = 202/234 (86.32%), Postives = 215/234 (91.88%), Query Frame = 0


Query: 76  ALFDHHQRIHPVTDVEPPPPRSAPLLNRPSPLPGKDGQHQILPPKNRRSCLCRCLCCTFC 135
           AL DHHQ+IHP+TDVEPPPP   P  + P P   K   HQILPPK RRSCLCRCLC TFC
Sbjct: 2   ALVDHHQKIHPLTDVEPPPP--PPQSSAPPPPLEKALHHQILPPKKRRSCLCRCLCYTFC 61

Query: 136 VILLLLIIVGAVVGILYLVFKPKIPTFSIDSLNINDLRLNFDMSLYARFDVKITTYNPNQ 195
           +ILLLLII+GAV+GILYLVFKPKIPTFSIDSLNI+DLRLNFDMSLYARFDVKITTYNPN+
Sbjct: 62  LILLLLIILGAVIGILYLVFKPKIPTFSIDSLNISDLRLNFDMSLYARFDVKITTYNPNE 121

Query: 196 KIGIYYEKGGVLSVWYTENKLCEGLLPVFYHGHRNKTTLDVVLTGRTVYGSTLMAALVEQ 255
           KIGIYYEKGGVLSVWYTENKLCEG LP FYHGHRNKT LDVVLTGRTVYGSTLM+ALVEQ
Sbjct: 122 KIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDVVLTGRTVYGSTLMSALVEQ 181

Query: 256 QRTGRIPLQLRAVAPVAVKLGKLKLKKVKILGNCLLVVDSLTANNAITIKASNC 310
           Q+TGRIPLQL+AVAPVAVK+GK+KLKKVKILGNCLLVVDSLTANNAITIKASNC
Sbjct: 182 QQTGRIPLQLQAVAPVAVKMGKMKLKKVKILGNCLLVVDSLTANNAITIKASNC 233

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BLAST of Clc07G03400 vs. NCBI nr
Match: XP_008461681.1 (PREDICTED: NDR1/HIN1-Like protein 3 [Cucumis melo] >KAA0050323.1 NDR1/HIN1-Like protein 3 [Cucumis melo var. makuwa] >TYK03541.1 NDR1/HIN1-Like protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 386.0 bits (990), Expect = 4.4e-103
Identity = 199/235 (84.68%), Postives = 213/235 (90.64%), Query Frame = 0


Query: 76  ALFDHHQRIHPVTDVEPPPPRSAPLLNRPSPLPGKDGQHQ-ILPPKNRRSCLCRCLCCTF 135
           AL DHHQ+IHP+TDVEPPPP         +P P K   HQ ILPPK RRS LCRCLC +F
Sbjct: 2   ALVDHHQKIHPLTDVEPPPPPP----QSSAPPPEKAVHHQIILPPKKRRSYLCRCLCYSF 61

Query: 136 CVILLLLIIVGAVVGILYLVFKPKIPTFSIDSLNINDLRLNFDMSLYARFDVKITTYNPN 195
           C+ILL+LII+GAV+GILYLVFKPKIPTFSIDSLNI+DLRLNFDMSLYARFDVKITTYNPN
Sbjct: 62  CLILLILIILGAVIGILYLVFKPKIPTFSIDSLNISDLRLNFDMSLYARFDVKITTYNPN 121

Query: 196 QKIGIYYEKGGVLSVWYTENKLCEGLLPVFYHGHRNKTTLDVVLTGRTVYGSTLMAALVE 255
           +KIGIYYEKGGVLSVWYTENKLCEG LP FYHGHRNKT LDVVLTGRTVYGSTLM+ALVE
Sbjct: 122 EKIGIYYEKGGVLSVWYTENKLCEGSLPEFYHGHRNKTALDVVLTGRTVYGSTLMSALVE 181

Query: 256 QQRTGRIPLQLRAVAPVAVKLGKLKLKKVKILGNCLLVVDSLTANNAITIKASNC 310
           QQ+TGRIPLQLRAVAPVAVK+GK+KLKKVKILGNCLLVVDSLTANNAITIKASNC
Sbjct: 182 QQQTGRIPLQLRAVAPVAVKMGKMKLKKVKILGNCLLVVDSLTANNAITIKASNC 232

[Close]

BLAST of Clc07G03400 vs. NCBI nr
Match: XP_022139245.1 (NDR1/HIN1-like protein 6 [Momordica charantia])

HSP 1 Score: 354.0 bits (907), Expect = 1.9e-93
Identity = 189/236 (80.08%), Postives = 202/236 (85.59%), Query Frame = 0


Query: 76  ALFDHHQ-RIHPVTDVEPPPPRSAPLLNRPSPLPGKDGQHQILPPKNRR-SCLCRCLCCT 135
           AL DHHQ RIHPV D+E PPP             G+  Q QI+PPK +R SCLCR LC +
Sbjct: 2   ALPDHHQIRIHPVADLEQPPPEK-----------GRQ-QLQIVPPKKKRYSCLCRWLCWS 61

Query: 136 FCVILLLLIIVGAVVGILYLVFKPKIPTFSIDSLNINDLRLNFDMSLYARFDVKITTYNP 195
             +IL+LLI+VGAVVGILYLVFKPKIP +S+DSLNI+DLRLNFDMSLYARFDVKIT YNP
Sbjct: 62  LSIILVLLIVVGAVVGILYLVFKPKIPAYSVDSLNISDLRLNFDMSLYARFDVKITAYNP 121

Query: 196 NQKIGIYYEKGGVLSVWYTENKLCEGLLPVFYHGHRNKTTLDVVLTGRTVYGSTLMAALV 255
           N+KIGIYYEKGGVLSVWYTENKLCEG LP FYHGHRNKT LDV LTGRTVYGSTLMAALV
Sbjct: 122 NEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDVDLTGRTVYGSTLMAALV 181

Query: 256 EQQRTGRIPLQLRAVAPVAVKLGKLKLKKVKILGNCLLVVDSLTANNAITIKASNC 310
           EQQRTGRIPLQLRA APVAVKLGKLKLKKVKILG CLLVVDSLTANNAI+IKASNC
Sbjct: 182 EQQRTGRIPLQLRAAAPVAVKLGKLKLKKVKILGECLLVVDSLTANNAISIKASNC 225

[Close]

BLAST of Clc07G03400 vs. NCBI nr
Match: XP_022996441.1 (NDR1/HIN1-like protein 6 [Cucurbita maxima])

HSP 1 Score: 350.1 bits (897), Expect = 2.7e-92
Identity = 182/234 (77.78%), Postives = 196/234 (83.76%), Query Frame = 0


Query: 76  ALFDHHQRIHPVTDVEPPPPRSAPLLNRPSPLPGKDGQHQILPPKNRRSCLCRCLCCTFC 135
           AL DH QRIHPVTDVE PPP   P    P  LP K         K R SC+C+C C TFC
Sbjct: 2   ALADHLQRIHPVTDVERPPPPHPPSAPPPKVLPSK---------KTRSSCVCKCFCWTFC 61

Query: 136 VILLLLIIVGAVVGILYLVFKPKIPTFSIDSLNINDLRLNFDMSLYARFDVKITTYNPNQ 195
           VI LLLI++G VVGILYLVFKPKIPT+SI+SL I+DLRLN DMSLYARFDVKIT YNPN+
Sbjct: 62  VIFLLLIVIGGVVGILYLVFKPKIPTYSINSLTISDLRLNVDMSLYARFDVKITAYNPNE 121

Query: 196 KIGIYYEKGGVLSVWYTENKLCEGLLPVFYHGHRNKTTLDVVLTGRTVYGSTLMAALVEQ 255
           KIGIYYEKGGVLSVWYT+ KLC+G LP FYHGHRN+T LDV LTGRTV G+TLMAALVEQ
Sbjct: 122 KIGIYYEKGGVLSVWYTDKKLCQGSLPAFYHGHRNRTALDVDLTGRTVKGNTLMAALVEQ 181

Query: 256 QRTGRIPLQLRAVAPVAVKLGKLKLKKVKILGNCLLVVDSLTANNAITIKASNC 310
           QRTGRIPLQLRA APVAVKLG+LKLKKVKILGNCLLVVDSLTANNAI+IKASNC
Sbjct: 182 QRTGRIPLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKASNC 226

[Close]

BLAST of Clc07G03400 vs. NCBI nr
Match: XP_023515288.1 (NDR1/HIN1-like protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 345.9 bits (886), Expect = 5.1e-91
Identity = 182/238 (76.47%), Postives = 197/238 (82.77%), Query Frame = 0


Query: 76  ALFDHHQRIHPVTDVE----PPPPRSAPLLNRPSPLPGKDGQHQILPPKNRRSCLCRCLC 135
           AL DH QRIHPVTDVE    PPPP   P    P  LP K         K R SC+C+C C
Sbjct: 2   ALADHLQRIHPVTDVERPPPPPPPPPPPSAPPPKLLPSK---------KTRSSCVCKCFC 61

Query: 136 CTFCVILLLLIIVGAVVGILYLVFKPKIPTFSIDSLNINDLRLNFDMSLYARFDVKITTY 195
            TFCVI LLLI++G VVGILYLVFKPKIPT+SI+SL I+DLRLN DMSLYARFDVKIT Y
Sbjct: 62  WTFCVIFLLLIVIGGVVGILYLVFKPKIPTYSINSLTISDLRLNVDMSLYARFDVKITAY 121

Query: 196 NPNQKIGIYYEKGGVLSVWYTENKLCEGLLPVFYHGHRNKTTLDVVLTGRTVYGSTLMAA 255
           NPN+KIGIYYEKGGVLSVWYT+ KLC+G LP FYHGHRN+T LDV LTGRTV G+TLMAA
Sbjct: 122 NPNEKIGIYYEKGGVLSVWYTDKKLCQGSLPAFYHGHRNRTALDVDLTGRTVKGNTLMAA 181

Query: 256 LVEQQRTGRIPLQLRAVAPVAVKLGKLKLKKVKILGNCLLVVDSLTANNAITIKASNC 310
           LVEQQRTGRIPLQLRA APVAVKLG+LKLKKVKILGNCLLVVDSL+ANNAI+IKASNC
Sbjct: 182 LVEQQRTGRIPLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLSANNAISIKASNC 230

[Close]

BLAST of Clc07G03400 vs. ExPASy Swiss-Prot
Match: Q8LD98 (NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 3.9e-54
Identity = 123/243 (50.62%), Postives = 154/243 (63.37%), Query Frame = 0


Query: 81  HQRIHPVTDVEPPPPR-SAPLLNR---------PSPLPGKDGQHQ---ILPPKNRRSCLC 140
           HQ+I+PV D E    R +APL+ R         PS +P      +   + PPK RRSC C
Sbjct: 4   HQKIYPVQDPEAATARPTAPLVPRGSSRSEHGDPSKVPLNQRPQRFVPLAPPKKRRSCCC 63

Query: 141 RCLCCTFCVILLLLIIVGAVVGILYLVFKPKIPTFSIDSLNINDLRLNFDMSLYARFDVK 200
           RC C TFC +LLL++ VGA +GILYLVFKPK+P +SID L +    LN D SL   F+V 
Sbjct: 64  RCFCYTFCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQDSSLTTAFNVT 123

Query: 201 ITTYNPNQKIGIYYEKGGVLSVWYTENKLCEGLLPVFYHGHRNKTTLDVVLTGRTVYGST 260
           IT  NPN+KIGIYYE G  ++VWY E++L  G LP FY GH N T + V +TG+T   S 
Sbjct: 124 ITAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVEMTGQTQNASG 183

Query: 261 LMAALVE-QQRTGRIPLQLRAVAPVAVKLGKLKLKKVKILGNCLLVVDSLTANNAITIKA 310
           L   L E QQRTG IPL++R   PV VK GKLKL +V+ L  C + VDSL  NN I I++
Sbjct: 184 LRTTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCGVFVDSLATNNVIKIQS 243

[Close]

BLAST of Clc07G03400 vs. ExPASy Swiss-Prot
Match: Q9ZVD2 (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 2.3e-22
Identity = 66/226 (29.20%), Postives = 121/226 (53.54%), Query Frame = 0


Query: 91  EPPPPRSAPLLNRPSPLPGKDGQHQILPPK-------------NRRSCLCRCLCCTFCVI 150
           +P PP S  ++  P     KD  ++I PP+             NR +C C C C     +
Sbjct: 29  KPAPPPSTYVIQVP-----KDQIYRIPPPENAHRFEQLSRKKTNRSNCRC-CFCSFLAAV 88

Query: 151 LLLLIIVGAVVGILYLVFKPKIPTFSIDSLNINDLRLNFDMSLYARFDVKITTYNPNQKI 210
            +L+++ G    +LYL+++P+ P +SI+  +++ + LN    +   F+V + + N N KI
Sbjct: 89  FILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNGNGKI 148

Query: 211 GIYYEKGGVLSVWYTENKLCEGLLPVFYHGHRNKTTLDVVLTGRTVYGSTLMAALVEQQR 270
           G+YYEK   + V+Y +  +  G++PVFY   +N T + +VL+G  +  ++ M   +  + 
Sbjct: 149 GVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEV 208

Query: 271 TGR-IPLQLRAVAPVAVKLGKLKLKKVKILGNCLLVVDSLTANNAI 303
           + + +P +L+  APV +K G +K   + +  +C + VD LTA + I
Sbjct: 209 SKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRI 248

[Close]

BLAST of Clc07G03400 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 4.1e-11
Identity = 56/194 (28.87%), Postives = 93/194 (47.94%), Query Frame = 0


Query: 124 SCLCRCLCCTFCVILLLLIIVGAVVG----ILYLVFKPKIPTFSIDSLNINDLRLNFDMS 183
           SCL  C CC   +I  +LI V  ++G    IL+L+F+P    F +   N+N    + + +
Sbjct: 42  SCLRCCGCCILSLICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNN 101

Query: 184 LYARFDVKITTYNPNQKIGIYYEKGGVLSVWYTENKLCEGLLPVFYHGHRNKTTLDVVLT 243
           L+   D+  T  NPNQ++G+YY++  V S +Y + +     +  FY GH+N T +   + 
Sbjct: 102 LHYSLDLNFTIRNPNQRVGVYYDEFSV-SGYYGDQRFGSANVSSFYQGHKNTTVILTKIE 161

Query: 244 GR--TVYGSTLMAALVEQQRTGRIPLQLRAVAPVAVKLGKLKLKKVKILGNCLLVVDSLT 303
           G+   V G      L + +++G   +  +    V  K   +K  K+K    C    D L 
Sbjct: 162 GQNLVVLGDGARTDLKDDEKSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKC----DDL- 221

Query: 304 ANNAITIKASNCTG 312
               I + +SN TG
Sbjct: 222 ---KIPLGSSNSTG 226

[Close]

BLAST of Clc07G03400 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.3e-08
Identity = 35/121 (28.93%), Postives = 60/121 (49.59%), Query Frame = 0


Query: 125 CLCRCLCCTFCVILLLLIIVGAVVG----ILYLVFKPKIPTFSIDSLNINDLRLNFDMSL 184
           CL  C CC   VI  +LI +  ++G    I++L+F+P    F +    + +  L+   +L
Sbjct: 36  CLGCCGCCILSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNL 95

Query: 185 YARFDVKITTYNPNQKIGIYYEKGGVLSVWYTENKLCEGLLPVFYHGHRNKTTLDVVLTG 242
               D+  T  NPN++IG+YY++  V   +  +       +  FY GH+N T +   L G
Sbjct: 96  RYNLDLNFTIRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVG 155

[Close]

BLAST of Clc07G03400 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 5.2e-06
Identity = 47/184 (25.54%), Postives = 85/184 (46.20%), Query Frame = 0


Query: 133 TFCVILLLLIIVGAVVGILYLVFKPKIPTFSIDSLNINDLRLNFDMSLYARFDVKITTY- 192
           TF   LLL+I       +++L+  P+ P FS+   +I  L L    +      V++T + 
Sbjct: 33  TFFSGLLLIIF------LVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNSSVQLTLFS 92

Query: 193 -NPNQKIGIYYEKGGVLSVWYTENKLCEGLLPVFYHGHRNKTTLDVVLTGRTVYGSTLMA 252
            NPN+K+GIYY+K  V + +  +    E  LP FY  H     L   L G  +  +    
Sbjct: 93  KNPNKKVGIYYDKLLVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQSFG 152

Query: 253 ALVEQQR-TGRIPLQLRAVAPVAVKLGKLKLKKVKILGNCLLVVD---SLTANNAITIKA 311
             + ++R TG+I + ++    +  K+G       +   NCL +V    ++T     +++ 
Sbjct: 153 YQISRERSTGKIIIGMKMDGKLRWKIGTWVSGAYRFNVNCLAIVAFGMNMTTPPLASLQG 210

[Close]

BLAST of Clc07G03400 vs. ExPASy TrEMBL
Match: A0A0A0KQ99 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G182130 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 7.1e-107
Identity = 202/234 (86.32%), Postives = 215/234 (91.88%), Query Frame = 0


Query: 76  ALFDHHQRIHPVTDVEPPPPRSAPLLNRPSPLPGKDGQHQILPPKNRRSCLCRCLCCTFC 135
           AL DHHQ+IHP+TDVEPPPP   P  + P P   K   HQILPPK RRSCLCRCLC TFC
Sbjct: 2   ALVDHHQKIHPLTDVEPPPP--PPQSSAPPPPLEKALHHQILPPKKRRSCLCRCLCYTFC 61

Query: 136 VILLLLIIVGAVVGILYLVFKPKIPTFSIDSLNINDLRLNFDMSLYARFDVKITTYNPNQ 195
           +ILLLLII+GAV+GILYLVFKPKIPTFSIDSLNI+DLRLNFDMSLYARFDVKITTYNPN+
Sbjct: 62  LILLLLIILGAVIGILYLVFKPKIPTFSIDSLNISDLRLNFDMSLYARFDVKITTYNPNE 121

Query: 196 KIGIYYEKGGVLSVWYTENKLCEGLLPVFYHGHRNKTTLDVVLTGRTVYGSTLMAALVEQ 255
           KIGIYYEKGGVLSVWYTENKLCEG LP FYHGHRNKT LDVVLTGRTVYGSTLM+ALVEQ
Sbjct: 122 KIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDVVLTGRTVYGSTLMSALVEQ 181

Query: 256 QRTGRIPLQLRAVAPVAVKLGKLKLKKVKILGNCLLVVDSLTANNAITIKASNC 310
           Q+TGRIPLQL+AVAPVAVK+GK+KLKKVKILGNCLLVVDSLTANNAITIKASNC
Sbjct: 182 QQTGRIPLQLQAVAPVAVKMGKMKLKKVKILGNCLLVVDSLTANNAITIKASNC 233

[Close]

BLAST of Clc07G03400 vs. ExPASy TrEMBL
Match: A0A5A7U340 (NDR1/HIN1-Like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00330 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 2.1e-103
Identity = 199/235 (84.68%), Postives = 213/235 (90.64%), Query Frame = 0


Query: 76  ALFDHHQRIHPVTDVEPPPPRSAPLLNRPSPLPGKDGQHQ-ILPPKNRRSCLCRCLCCTF 135
           AL DHHQ+IHP+TDVEPPPP         +P P K   HQ ILPPK RRS LCRCLC +F
Sbjct: 2   ALVDHHQKIHPLTDVEPPPPPP----QSSAPPPEKAVHHQIILPPKKRRSYLCRCLCYSF 61

Query: 136 CVILLLLIIVGAVVGILYLVFKPKIPTFSIDSLNINDLRLNFDMSLYARFDVKITTYNPN 195
           C+ILL+LII+GAV+GILYLVFKPKIPTFSIDSLNI+DLRLNFDMSLYARFDVKITTYNPN
Sbjct: 62  CLILLILIILGAVIGILYLVFKPKIPTFSIDSLNISDLRLNFDMSLYARFDVKITTYNPN 121

Query: 196 QKIGIYYEKGGVLSVWYTENKLCEGLLPVFYHGHRNKTTLDVVLTGRTVYGSTLMAALVE 255
           +KIGIYYEKGGVLSVWYTENKLCEG LP FYHGHRNKT LDVVLTGRTVYGSTLM+ALVE
Sbjct: 122 EKIGIYYEKGGVLSVWYTENKLCEGSLPEFYHGHRNKTALDVVLTGRTVYGSTLMSALVE 181

Query: 256 QQRTGRIPLQLRAVAPVAVKLGKLKLKKVKILGNCLLVVDSLTANNAITIKASNC 310
           QQ+TGRIPLQLRAVAPVAVK+GK+KLKKVKILGNCLLVVDSLTANNAITIKASNC
Sbjct: 182 QQQTGRIPLQLRAVAPVAVKMGKMKLKKVKILGNCLLVVDSLTANNAITIKASNC 232

[Close]

BLAST of Clc07G03400 vs. ExPASy TrEMBL
Match: A0A1S3CFA6 (NDR1/HIN1-Like protein 3 OS=Cucumis melo OX=3656 GN=LOC103500225 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 2.1e-103
Identity = 199/235 (84.68%), Postives = 213/235 (90.64%), Query Frame = 0


Query: 76  ALFDHHQRIHPVTDVEPPPPRSAPLLNRPSPLPGKDGQHQ-ILPPKNRRSCLCRCLCCTF 135
           AL DHHQ+IHP+TDVEPPPP         +P P K   HQ ILPPK RRS LCRCLC +F
Sbjct: 2   ALVDHHQKIHPLTDVEPPPPPP----QSSAPPPEKAVHHQIILPPKKRRSYLCRCLCYSF 61

Query: 136 CVILLLLIIVGAVVGILYLVFKPKIPTFSIDSLNINDLRLNFDMSLYARFDVKITTYNPN 195
           C+ILL+LII+GAV+GILYLVFKPKIPTFSIDSLNI+DLRLNFDMSLYARFDVKITTYNPN
Sbjct: 62  CLILLILIILGAVIGILYLVFKPKIPTFSIDSLNISDLRLNFDMSLYARFDVKITTYNPN 121

Query: 196 QKIGIYYEKGGVLSVWYTENKLCEGLLPVFYHGHRNKTTLDVVLTGRTVYGSTLMAALVE 255
           +KIGIYYEKGGVLSVWYTENKLCEG LP FYHGHRNKT LDVVLTGRTVYGSTLM+ALVE
Sbjct: 122 EKIGIYYEKGGVLSVWYTENKLCEGSLPEFYHGHRNKTALDVVLTGRTVYGSTLMSALVE 181

Query: 256 QQRTGRIPLQLRAVAPVAVKLGKLKLKKVKILGNCLLVVDSLTANNAITIKASNC 310
           QQ+TGRIPLQLRAVAPVAVK+GK+KLKKVKILGNCLLVVDSLTANNAITIKASNC
Sbjct: 182 QQQTGRIPLQLRAVAPVAVKMGKMKLKKVKILGNCLLVVDSLTANNAITIKASNC 232

[Close]

BLAST of Clc07G03400 vs. ExPASy TrEMBL
Match: A0A6J1CBS7 (NDR1/HIN1-like protein 6 OS=Momordica charantia OX=3673 GN=LOC111010204 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 9.0e-94
Identity = 189/236 (80.08%), Postives = 202/236 (85.59%), Query Frame = 0


Query: 76  ALFDHHQ-RIHPVTDVEPPPPRSAPLLNRPSPLPGKDGQHQILPPKNRR-SCLCRCLCCT 135
           AL DHHQ RIHPV D+E PPP             G+  Q QI+PPK +R SCLCR LC +
Sbjct: 2   ALPDHHQIRIHPVADLEQPPPEK-----------GRQ-QLQIVPPKKKRYSCLCRWLCWS 61

Query: 136 FCVILLLLIIVGAVVGILYLVFKPKIPTFSIDSLNINDLRLNFDMSLYARFDVKITTYNP 195
             +IL+LLI+VGAVVGILYLVFKPKIP +S+DSLNI+DLRLNFDMSLYARFDVKIT YNP
Sbjct: 62  LSIILVLLIVVGAVVGILYLVFKPKIPAYSVDSLNISDLRLNFDMSLYARFDVKITAYNP 121

Query: 196 NQKIGIYYEKGGVLSVWYTENKLCEGLLPVFYHGHRNKTTLDVVLTGRTVYGSTLMAALV 255
           N+KIGIYYEKGGVLSVWYTENKLCEG LP FYHGHRNKT LDV LTGRTVYGSTLMAALV
Sbjct: 122 NEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDVDLTGRTVYGSTLMAALV 181

Query: 256 EQQRTGRIPLQLRAVAPVAVKLGKLKLKKVKILGNCLLVVDSLTANNAITIKASNC 310
           EQQRTGRIPLQLRA APVAVKLGKLKLKKVKILG CLLVVDSLTANNAI+IKASNC
Sbjct: 182 EQQRTGRIPLQLRAAAPVAVKLGKLKLKKVKILGECLLVVDSLTANNAISIKASNC 225

[Close]

BLAST of Clc07G03400 vs. ExPASy TrEMBL
Match: A0A6J1K4R4 (NDR1/HIN1-like protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111491664 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 1.3e-92
Identity = 182/234 (77.78%), Postives = 196/234 (83.76%), Query Frame = 0


Query: 76  ALFDHHQRIHPVTDVEPPPPRSAPLLNRPSPLPGKDGQHQILPPKNRRSCLCRCLCCTFC 135
           AL DH QRIHPVTDVE PPP   P    P  LP K         K R SC+C+C C TFC
Sbjct: 2   ALADHLQRIHPVTDVERPPPPHPPSAPPPKVLPSK---------KTRSSCVCKCFCWTFC 61

Query: 136 VILLLLIIVGAVVGILYLVFKPKIPTFSIDSLNINDLRLNFDMSLYARFDVKITTYNPNQ 195
           VI LLLI++G VVGILYLVFKPKIPT+SI+SL I+DLRLN DMSLYARFDVKIT YNPN+
Sbjct: 62  VIFLLLIVIGGVVGILYLVFKPKIPTYSINSLTISDLRLNVDMSLYARFDVKITAYNPNE 121

Query: 196 KIGIYYEKGGVLSVWYTENKLCEGLLPVFYHGHRNKTTLDVVLTGRTVYGSTLMAALVEQ 255
           KIGIYYEKGGVLSVWYT+ KLC+G LP FYHGHRN+T LDV LTGRTV G+TLMAALVEQ
Sbjct: 122 KIGIYYEKGGVLSVWYTDKKLCQGSLPAFYHGHRNRTALDVDLTGRTVKGNTLMAALVEQ 181

Query: 256 QRTGRIPLQLRAVAPVAVKLGKLKLKKVKILGNCLLVVDSLTANNAITIKASNC 310
           QRTGRIPLQLRA APVAVKLG+LKLKKVKILGNCLLVVDSLTANNAI+IKASNC
Sbjct: 182 QRTGRIPLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKASNC 226

[Close]

BLAST of Clc07G03400 vs. TAIR 10
Match: AT1G54540.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 227.3 bits (578), Expect = 2.5e-59
Identity = 118/236 (50.00%), Postives = 161/236 (68.22%), Query Frame = 0


Query: 82  QRIHPVTDVE-------PPPPRSAPLLNRPSPLPGKDGQHQILPPKNRRSCLCRCLCCTF 141
           Q+IHPV  +E        P P    LL    P+P       ++P KNR  C C+  C   
Sbjct: 5   QKIHPVLQMEANKTKTTTPAPGKTVLLPVQRPIP-----PPVIPSKNRNMC-CKIFCWVL 64

Query: 142 CVILLLLIIVGAVVGILYLVFKPKIPTFSIDSLNINDLRLNFDMSLYARFDVKITTYNPN 201
            ++++ LI +   V ++Y VF PK+P++ ++SL + +L +N D+SL A F V+IT  NPN
Sbjct: 65  SLLVIALIALAIAVAVVYFVFHPKLPSYEVNSLRVTNLGINLDLSLSAEFKVEITARNPN 124

Query: 202 QKIGIYYEKGGVLSVWYTENKLCEGLLPVFYHGHRNKTTLDVVLTGRTVYGSTLMAALVE 261
           +KIGIYYEKGG + VWY + KLCEG +P FY GHRN T L+V LTGR  YG+T++AAL +
Sbjct: 125 EKIGIYYEKGGHIGVWYDKTKLCEGPIPRFYQGHRNVTKLNVALTGRAQYGNTVLAALQQ 184

Query: 262 QQRTGRIPLQLRAVAPVAVKLGKLKLKKVKILGNCLLVVDSLTANNAITIKASNCT 311
           QQ+TGR+PL L+  APVA+KLG LK+KK++ILG+C LVVDSL+ NN I IKAS+C+
Sbjct: 185 QQQTGRVPLDLKVNAPVAIKLGNLKMKKIRILGSCKLVVDSLSTNNNINIKASDCS 234

[Close]

BLAST of Clc07G03400 vs. TAIR 10
Match: AT5G36970.1 (NDR1/HIN1-like 25 )

HSP 1 Score: 216.1 bits (549), Expect = 5.6e-56
Identity = 122/239 (51.05%), Postives = 156/239 (65.27%), Query Frame = 0


Query: 81  HQRIHPVTDVEPPPPRSAPLLNRPSPL-----PGKDGQHQILPP----KNRRSCLCRCLC 140
           HQ+IHPV+D E PP  +APL+ R S       P K  Q   L P    K  RSC CRC+C
Sbjct: 4   HQKIHPVSDPEAPPHPTAPLVPRGSSRSEHGDPTKTQQAAPLDPPREKKGSRSCWCRCVC 63

Query: 141 CTFCVILLLLIIVGAVVGILYLVFKPKIPTFSIDSLNINDLRLNFDMSLYARFDVKITTY 200
            T  V+ LL++IVGA+VGILYLVF+PK P ++ID L +   +LN D+SL   F+V IT  
Sbjct: 64  YTLLVLFLLIVIVGAIVGILYLVFRPKFPDYNIDRLQLTRFQLNQDLSLSTAFNVTITAK 123

Query: 201 NPNQKIGIYYEKGGVLSVWYTENKLCEGLLPVFYHGHRNKTTLDVVLTGRTVYGSTLMAA 260
           NPN+KIGIYYE G  +SV Y + ++  G LP FY GH N T + V +TG T   ++LM  
Sbjct: 124 NPNEKIGIYYEDGSKISVLYMQTRISNGSLPKFYQGHENTTIILVEMTGFTQNATSLMTT 183

Query: 261 LVEQQR-TGRIPLQLRAVAPVAVKLGKLKLKKVKILGNCLLVVDSLTANNAITIKASNC 310
           L EQQR TG IPL++R   PV +KLGKLKL KV+ L  C + VDSL AN+ I +++SNC
Sbjct: 184 LQEQQRLTGSIPLRIRVTQPVRIKLGKLKLMKVRFLVRCGVSVDSLAANSVIRVRSSNC 242

[Close]

BLAST of Clc07G03400 vs. TAIR 10
Match: AT1G65690.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 213.8 bits (543), Expect = 2.8e-55
Identity = 123/243 (50.62%), Postives = 154/243 (63.37%), Query Frame = 0


Query: 81  HQRIHPVTDVEPPPPR-SAPLLNR---------PSPLPGKDGQHQ---ILPPKNRRSCLC 140
           HQ+I+PV D E    R +APL+ R         PS +P      +   + PPK RRSC C
Sbjct: 4   HQKIYPVQDPEAATARPTAPLVPRGSSRSEHGDPSKVPLNQRPQRFVPLAPPKKRRSCCC 63

Query: 141 RCLCCTFCVILLLLIIVGAVVGILYLVFKPKIPTFSIDSLNINDLRLNFDMSLYARFDVK 200
           RC C TFC +LLL++ VGA +GILYLVFKPK+P +SID L +    LN D SL   F+V 
Sbjct: 64  RCFCYTFCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQDSSLTTAFNVT 123

Query: 201 ITTYNPNQKIGIYYEKGGVLSVWYTENKLCEGLLPVFYHGHRNKTTLDVVLTGRTVYGST 260
           IT  NPN+KIGIYYE G  ++VWY E++L  G LP FY GH N T + V +TG+T   S 
Sbjct: 124 ITAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVEMTGQTQNASG 183

Query: 261 LMAALVE-QQRTGRIPLQLRAVAPVAVKLGKLKLKKVKILGNCLLVVDSLTANNAITIKA 310
           L   L E QQRTG IPL++R   PV VK GKLKL +V+ L  C + VDSL  NN I I++
Sbjct: 184 LRTTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCGVFVDSLATNNVIKIQS 243

[Close]

BLAST of Clc07G03400 vs. TAIR 10
Match: AT2G27080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 108.2 bits (269), Expect = 1.7e-23
Identity = 66/226 (29.20%), Postives = 121/226 (53.54%), Query Frame = 0


Query: 91  EPPPPRSAPLLNRPSPLPGKDGQHQILPPK-------------NRRSCLCRCLCCTFCVI 150
           +P PP S  ++  P     KD  ++I PP+             NR +C C C C     +
Sbjct: 29  KPAPPPSTYVIQVP-----KDQIYRIPPPENAHRFEQLSRKKTNRSNCRC-CFCSFLAAV 88

Query: 151 LLLLIIVGAVVGILYLVFKPKIPTFSIDSLNINDLRLNFDMSLYARFDVKITTYNPNQKI 210
            +L+++ G    +LYL+++P+ P +SI+  +++ + LN    +   F+V + + N N KI
Sbjct: 89  FILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNGNGKI 148

Query: 211 GIYYEKGGVLSVWYTENKLCEGLLPVFYHGHRNKTTLDVVLTGRTVYGSTLMAALVEQQR 270
           G+YYEK   + V+Y +  +  G++PVFY   +N T + +VL+G  +  ++ M   +  + 
Sbjct: 149 GVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEV 208

Query: 271 TGR-IPLQLRAVAPVAVKLGKLKLKKVKILGNCLLVVDSLTANNAI 303
           + + +P +L+  APV +K G +K   + +  +C + VD LTA + I
Sbjct: 209 SKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRI 248

[Close]

BLAST of Clc07G03400 vs. TAIR 10
Match: AT2G27080.2 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 108.2 bits (269), Expect = 1.7e-23
Identity = 66/226 (29.20%), Postives = 121/226 (53.54%), Query Frame = 0


Query: 91  EPPPPRSAPLLNRPSPLPGKDGQHQILPPK-------------NRRSCLCRCLCCTFCVI 150
           +P PP S  ++  P     KD  ++I PP+             NR +C C C C     +
Sbjct: 29  KPAPPPSTYVIQVP-----KDQIYRIPPPENAHRFEQLSRKKTNRSNCRC-CFCSFLAAV 88

Query: 151 LLLLIIVGAVVGILYLVFKPKIPTFSIDSLNINDLRLNFDMSLYARFDVKITTYNPNQKI 210
            +L+++ G    +LYL+++P+ P +SI+  +++ + LN    +   F+V + + N N KI
Sbjct: 89  FILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNGNGKI 148

Query: 211 GIYYEKGGVLSVWYTENKLCEGLLPVFYHGHRNKTTLDVVLTGRTVYGSTLMAALVEQQR 270
           G+YYEK   + V+Y +  +  G++PVFY   +N T + +VL+G  +  ++ M   +  + 
Sbjct: 149 GVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEV 208

Query: 271 TGR-IPLQLRAVAPVAVKLGKLKLKKVKILGNCLLVVDSLTANNAI 303
           + + +P +L+  APV +K G +K   + +  +C + VD LTA + I
Sbjct: 209 SKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRI 248

The following BLAST results are available for this feature:

BLAST of Clc07G03400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656174.1	1.5e-106	86.32	NDR1/HIN1-like protein 6 [Cucumis sativus] >KGN50557.1 hypothetical protein Csa_...	[more]
XP_008461681.1	4.4e-103	84.68	PREDICTED: NDR1/HIN1-Like protein 3 [Cucumis melo] >KAA0050323.1 NDR1/HIN1-Like ...	[more]
XP_022139245.1	1.9e-93	80.08	NDR1/HIN1-like protein 6 [Momordica charantia]	[more]
XP_022996441.1	2.7e-92	77.78	NDR1/HIN1-like protein 6 [Cucurbita maxima]	[more]
XP_023515288.1	5.1e-91	76.47	NDR1/HIN1-like protein 6 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc07G03400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LD98	3.9e-54	50.62	NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1	[more]
Q9ZVD2	2.3e-22	29.20	NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1	[more]
Q9SRN1	4.1e-11	28.87	NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1	[more]
Q9FNH6	3.3e-08	28.93	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
Q9FI03	5.2e-06	25.54	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]

BLAST of Clc07G03400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQ99	7.1e-107	86.32	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G182130 PE=4 ...	[more]
A0A5A7U340	2.1e-103	84.68	NDR1/HIN1-Like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CFA6	2.1e-103	84.68	NDR1/HIN1-Like protein 3 OS=Cucumis melo OX=3656 GN=LOC103500225 PE=4 SV=1	[more]
A0A6J1CBS7	9.0e-94	80.08	NDR1/HIN1-like protein 6 OS=Momordica charantia OX=3673 GN=LOC111010204 PE=4 SV=...	[more]
A0A6J1K4R4	1.3e-92	77.78	NDR1/HIN1-like protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111491664 PE=4 SV=1	[more]

BLAST of Clc07G03400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54540.1	2.5e-59	50.00	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G36970.1	5.6e-56	51.05	NDR1/HIN1-like 25	[more]
AT1G65690.1	2.8e-55	50.62	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G27080.1	1.7e-23	29.20	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G27080.2	1.7e-23	29.20	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 188..283 e-value: 3.1E-7 score: 30.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..102
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 116..311
None	No IPR available	PANTHER	PTHR31852:SF195	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 116..311

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G03400.1	Clc07G03400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane