Clc07G02480 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G02480
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Squamosa promoter-binding protein, putative
Location	ClcChr07: 2470108 .. 2472151 (+)
RNA-Seq Expression	Clc07G02480
Synteny	Clc07G02480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAATATGTAGAAGTACAGACTCTAACCAAGATCTACCATTAGGAGTCGTTTTAAATACTTAAAAACACTTTTCCAAGACACTTGAAAAGTCACTTCAAATCGGTCTTAATACATTACGAAACATATCAACCGTCTATCCACTCAAATCAAAATTTAGCTGTTTGTAGTTTGACTCCAATCCTATTTTTCCCTTCAAGAACATCATACAAATTCACCTTCATTGAATAAATAGGTTGGATGGATGAAACTTTTACTTTGAATCTAACATCGGTGGAATCTAAACCGAGGTTTGAGGTTGGGGTACGTTGATAAAAACTAGTAAGACCCAACAAAGTCCTTCCTCTCTCTCTCCCGCCAAACCCTCTATTTGGACCCTACCATAGCCATCACAGAGGCTGTTGTCGCTGTTCCACAGGCCCCCACCACTCACGAGAAAGCTCATACATCATACAATTAGAGAGAGAGAGAGAGAGAGAGTGAAAGAAAGTGGGTTTCTCTTTTGTCTTTGAACATTCCTCGTTACCCTCCCATTATGTACGACATTAGCAACAGCGCTAGCTGCAAGAACAGACACGGATTCACAAATAAAGAAGAGAAAAGGAAAAAAGGAAGATAAAAAGGTCCAAGTGTTTGTGTGTGTGTGTGTGTGTGTTTGTGGTCCATTGCTTTAATCCTCCTCTCTCCTTCTCCCTCTTTAAAACTCATCCTTCCCCCCCTTTTTTCTTCTATAATTCTTCCACCTCTCATTTCCCTTTTGGAATCTTCTCTTCTCAACTGCTGTTTGTGGGTTCTTGATGGATGTTGGTAAAATGGAAACAACAATTATTCATCATCATCAGAAACAGGAGAGAGAGATGGAGAAGGAGAAGGTGAAGAAGGAGGCTATGGTGGGAGATGAAGATGGAGAATATGATGAGGACAAGAAGAGAAAAGGTATAATAATTGGTGGTGGTGGCTCCGGGAAGAAGGCGGCCGCCGGCGGGATGCGGTGTTGTCAAGCTGAGAAATGTGTGGCTGATCTTAATGAAGCCAAACCATATCATAGGAGGCATAAGGTCTGTGAAGTTCATGCCAAATCTCAGGTTGTGCTTGTGGGTGGATTCAAGCAGAGATTTTGTCAGCAATGTAGCAGGTTTTGAACAAACACATCTTTGATTTTTGACTTCATACTTGATATAACTTTTCTATTTTGTTAGATGATATATCATGATTTAATATAGTACCAAAGTAGATCGTCCAAAAAGGTTCGTCTTCAAGCTTCTGCAACATTAGCCACTTGTTGAGTCTTTTATATATTTTAAGCCTACAAGTAAGAGGAGTGTTAGATAACATAATATTCACATTTACCCACCAGTTTAAGCTTTGAAGTCAATCGGTGTTCTAAGATATTTTTGACAAAATAATAAATACCATTTGGAAGATGTCAAAAAAAACAACCTTGAATTTCTGAAGTTGTTGAGTTTGGAATTTGAGTGTAGATTTCATGAGCTATCGGAATTCGACGAAGCGAAAAGGAGTTGTCGGAGACGTCTCGCTGGGCACAACGAGCGTCGAAGGAAGATATCAGCTGAGTCTAATGCCGAATGCTCAATCCAGAAAGGGAGTGGAACACAGATGAAGGACAGTGTCTGTGGGCAGGTTGATGATAAAGGGAGAATTCAAATGACCATTCAAGAAAATGCTGCTTATAAACACTTCCAGATCAGATAAGTTTACGGACAACATATAACTATCTGCTCATGCTCTCTCTCTTCTGTCAGGTCTAGGGGTGTTAACAATAGCCTGTATTAAGCTGTGCAAGATCAAGAAAGAAAGAATTACCTTGTTAGAGGACTTATCCATTATAAAGCTCAAGAATATTGTGTCATTAAAAAGATGTAAAGATCTAGTTCATCAGAGAATCAGATTGATCTGTTTCTGGGTCTGCCTTATGAACACACTACTATGGTTATTATCTGTCAGCTGCTGAAGTTACAATCACAAAATCATATTTTTCAACTTTCTTCTGCTCAGACAAGGATACTTCAATAAGAATGGAGAGAG

mRNA sequence

GTAATATGTAGAAGTACAGACTCTAACCAAGATCTACCATTAGGAGTCGTTTTAAATACTTAAAAACACTTTTCCAAGACACTTGAAAAGTCACTTCAAATCGGTCTTAATACATTACGAAACATATCAACCGTCTATCCACTCAAATCAAAATTTAGCTGTTTGTAGTTTGACTCCAATCCTATTTTTCCCTTCAAGAACATCATACAAATTCACCTTCATTGAATAAATAGGTTGGATGGATGAAACTTTTACTTTGAATCTAACATCGGTGGAATCTAAACCGAGGTTTGAGGTTGGGGTACGTTGATAAAAACTAGTAAGACCCAACAAAGTCCTTCCTCTCTCTCTCCCGCCAAACCCTCTATTTGGACCCTACCATAGCCATCACAGAGGCTGTTGTCGCTGTTCCACAGGCCCCCACCACTCACGAGAAAGCTCATACATCATACAATTAGAGAGAGAGAGAGAGAGAGAGTGAAAGAAAGTGGGTTTCTCTTTTGTCTTTGAACATTCCTCGTTACCCTCCCATTATGTACGACATTAGCAACAGCGCTAGCTGCAAGAACAGACACGGATTCACAAATAAAGAAGAGAAAAGGAAAAAAGGAAGATAAAAAGGTCCAAGTGTTTGTGTGTGTGTGTGTGTGTGTTTGTGGTCCATTGCTTTAATCCTCCTCTCTCCTTCTCCCTCTTTAAAACTCATCCTTCCCCCCCTTTTTTCTTCTATAATTCTTCCACCTCTCATTTCCCTTTTGGAATCTTCTCTTCTCAACTGCTGTTTGTGGGTTCTTGATGGATGTTGGTAAAATGGAAACAACAATTATTCATCATCATCAGAAACAGGAGAGAGAGATGGAGAAGGAGAAGGTGAAGAAGGAGGCTATGGTGGGAGATGAAGATGGAGAATATGATGAGGACAAGAAGAGAAAAGGTATAATAATTGGTGGTGGTGGCTCCGGGAAGAAGGCGGCCGCCGGCGGGATGCGGTGTTGTCAAGCTGAGAAATGTGTGGCTGATCTTAATGAAGCCAAACCATATCATAGGAGGCATAAGGTCTGTGAAGTTCATGCCAAATCTCAGGTTGTGCTTGTGGGTGGATTCAAGCAGAGATTTTGTCAGCAATGTAGCAGATTTCATGAGCTATCGGAATTCGACGAAGCGAAAAGGAGTTGTCGGAGACGTCTCGCTGGGCACAACGAGCGTCGAAGGAAGATATCAGCTGAGTCTAATGCCGAATGCTCAATCCAGAAAGGGAGTGGAACACAGATGAAGGACAGTGTCTGTGGGCAGGTTGATGATAAAGGGAGAATTCAAATGACCATTCAAGAAAATGCTGCTTATAAACACTTCCAGATCAGATAAGTTTACGGACAACATATAACTATCTGCTCATGCTCTCTCTCTTCTGTCAGGTCTAGGGGTGTTAACAATAGCCTGTATTAAGCTGTGCAAGATCAAGAAAGAAAGAATTACCTTGTTAGAGGACTTATCCATTATAAAGCTCAAGAATATTGTGTCATTAAAAAGATGTAAAGATCTAGTTCATCAGAGAATCAGATTGATCTGTTTCTGGGTCTGCCTTATGAACACACTACTATGGTTATTATCTGTCAGCTGCTGAAGTTACAATCACAAAATCATATTTTTCAACTTTCTTCTGCTCAGACAAGGATACTTCAATAAGAATGGAGAGAG

Coding sequence (CDS)

ATGGATGTTGGTAAAATGGAAACAACAATTATTCATCATCATCAGAAACAGGAGAGAGAGATGGAGAAGGAGAAGGTGAAGAAGGAGGCTATGGTGGGAGATGAAGATGGAGAATATGATGAGGACAAGAAGAGAAAAGGTATAATAATTGGTGGTGGTGGCTCCGGGAAGAAGGCGGCCGCCGGCGGGATGCGGTGTTGTCAAGCTGAGAAATGTGTGGCTGATCTTAATGAAGCCAAACCATATCATAGGAGGCATAAGGTCTGTGAAGTTCATGCCAAATCTCAGGTTGTGCTTGTGGGTGGATTCAAGCAGAGATTTTGTCAGCAATGTAGCAGATTTCATGAGCTATCGGAATTCGACGAAGCGAAAAGGAGTTGTCGGAGACGTCTCGCTGGGCACAACGAGCGTCGAAGGAAGATATCAGCTGAGTCTAATGCCGAATGCTCAATCCAGAAAGGGAGTGGAACACAGATGAAGGACAGTGTCTGTGGGCAGGTTGATGATAAAGGGAGAATTCAAATGACCATTCAAGAAAATGCTGCTTATAAACACTTCCAGATCAGATAA

Protein sequence

MDVGKMETTIIHHHQKQEREMEKEKVKKEAMVGDEDGEYDEDKKRKGIIIGGGGSGKKAAAGGMRCCQAEKCVADLNEAKPYHRRHKVCEVHAKSQVVLVGGFKQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIQKGSGTQMKDSVCGQVDDKGRIQMTIQENAAYKHFQIR

Homology

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BLAST of Clc07G02480 vs. NCBI nr
Match: XP_038888920.1 (squamosa promoter-binding protein 1-like [Benincasa hispida])

HSP 1 Score: 331.3 bits (848), Expect = 5.6e-87
Identity = 170/191 (89.01%), Postives = 180/191 (94.24%), Query Frame = 0


Query: 1   MDVGKMETTIIHHHQKQEREMEKEKVKKEAMVGDEDGEYDEDKKRKGIIIGGGGSGKKAA 60
           MDVGK+ETTI HH + +ER ME E+VKKE    DEDGEYD+DKKRKGI+IGGGGSGKKAA
Sbjct: 1   MDVGKIETTIHHHQKHRERVMENERVKKE----DEDGEYDDDKKRKGIVIGGGGSGKKAA 60

Query: 61  --AGGMRCCQAEKCVADLNEAKPYHRRHKVCEVHAKSQVVLVGGFKQRFCQQCSRFHELS 120
             +GGMRCCQAEKCVADLNEAKPYHRRHKVCEVHAKSQVVLVGGFKQRFCQQCSRFHELS
Sbjct: 61  GGSGGMRCCQAEKCVADLNEAKPYHRRHKVCEVHAKSQVVLVGGFKQRFCQQCSRFHELS 120

Query: 121 EFDEAKRSCRRRLAGHNERRRKISAESNAECSIQKGSGTQMKDSVCGQVDDKGRIQMTIQ 180
           EFDEAKRSCRRRLAGHNERRRKISAESNAECSI+KG+GTQMKDSVCGQVDDKGRIQMTIQ
Sbjct: 121 EFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGTQMKDSVCGQVDDKGRIQMTIQ 180

Query: 181 ENAAYKHFQIR 190
           ENA+YKHFQIR
Sbjct: 181 ENASYKHFQIR 187

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BLAST of Clc07G02480 vs. NCBI nr
Match: XP_022989218.1 (squamosa promoter-binding protein 1-like [Cucurbita maxima])

HSP 1 Score: 310.8 bits (795), Expect = 7.9e-81
Identity = 162/193 (83.94%), Postives = 174/193 (90.16%), Query Frame = 0


Query: 1   MDVGKMETTIIHHHQKQEREMEKEKVKKEAMVGDEDGEYDEDKKRKGII--IGGGGSGKK 60
           MDVGK+ETT   H QKQ   MEK +VK++ +V DEDGEYDEDKKRKG+I  +GGGGSGKK
Sbjct: 1   MDVGKIETT---HQQKQRVVMEKGRVKEDMVVVDEDGEYDEDKKRKGVIVSVGGGGSGKK 60

Query: 61  AA--AGGMRCCQAEKCVADLNEAKPYHRRHKVCEVHAKSQVVLVGGFKQRFCQQCSRFHE 120
           AA   GGMRCCQAEKC ADL+EAKPYHRRHKVCEVHAKSQVVLVGGF+QRFCQQCSRFHE
Sbjct: 61  AAGGGGGMRCCQAEKCTADLSEAKPYHRRHKVCEVHAKSQVVLVGGFRQRFCQQCSRFHE 120

Query: 121 LSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIQKGSGTQMKDSVCGQVDDKGRIQMT 180
           LSEFDE KRSCRRRLAGHNERRRKISAESNAECSI+KG+G QMKDSVCGQ DD+GRIQMT
Sbjct: 121 LSEFDEMKRSCRRRLAGHNERRRKISAESNAECSIRKGTGAQMKDSVCGQADDQGRIQMT 180

Query: 181 IQENAAYKHFQIR 190
           IQENAAYKHFQIR
Sbjct: 181 IQENAAYKHFQIR 190

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BLAST of Clc07G02480 vs. NCBI nr
Match: XP_023531078.1 (squamosa promoter-binding protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 300.8 bits (769), Expect = 8.1e-78
Identity = 160/194 (82.47%), Postives = 171/194 (88.14%), Query Frame = 0


Query: 1   MDVGKMETTIIHHHQKQEREMEKEKVKKEAMVGDEDGEYDEDKKRKGII--IGGGGSGKK 60
           MDVGK+ET    H QKQ   MEK +VK+  +V DEDGEYDEDKKRKG+I  +G GGSGKK
Sbjct: 1   MDVGKIETA---HQQKQRVVMEKGRVKEAMVVVDEDGEYDEDKKRKGVIVSVGSGGSGKK 60

Query: 61  AA--AGGMRCCQAEKCVADLNEAKPYHRRHKVCEVHAKSQVVLVGGFKQRFCQQCSRFHE 120
           AA   GGMRCCQAEKC ADL+EAKPYHRRHKVCEVHAKSQVVLVGGF+QRFCQQCSRFHE
Sbjct: 61  AAGGGGGMRCCQAEKCTADLSEAKPYHRRHKVCEVHAKSQVVLVGGFRQRFCQQCSRFHE 120

Query: 121 LSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIQKGS-GTQMKDSVCGQVDDKGRIQM 180
           LSEFDE KRSCRRRLAGHNERRRKISAESNAECSI+KG+ G QMKDSVCGQ DD+GRIQM
Sbjct: 121 LSEFDEMKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGAQMKDSVCGQADDQGRIQM 180

Query: 181 TIQENAAYKHFQIR 190
           TIQENAAYKHFQIR
Sbjct: 181 TIQENAAYKHFQIR 191

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BLAST of Clc07G02480 vs. NCBI nr
Match: XP_022930778.1 (squamosa promoter-binding protein 1-like [Cucurbita moschata] >KAG6589255.1 Squamosa promoter-binding-like protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 300.4 bits (768), Expect = 1.1e-77
Identity = 162/195 (83.08%), Postives = 173/195 (88.72%), Query Frame = 0


Query: 1   MDVGKMETTIIHHHQKQEREMEKEKVKKEAMVGDEDGEYDEDKKRKGII--IGGGGSGKK 60
           MDVGK+ETT   H QKQ   MEK +VK+  +V DEDGEYDEDKKRKG+I  +GGGGSGKK
Sbjct: 1   MDVGKIETT---HQQKQRVVMEKGRVKEAMVVVDEDGEYDEDKKRKGVIVSVGGGGSGKK 60

Query: 61  AA--AGGMRCCQAEKCVADLNEAKPYHRRHKVCEVHAKSQVVLVGGFKQRFCQQCSRFHE 120
           AA   GGMRCCQAEKC ADL+EAKPYHRRHKVCEVHAKSQVVLVGGF+QRFCQQCSRFHE
Sbjct: 61  AAGGGGGMRCCQAEKCTADLSEAKPYHRRHKVCEVHAKSQVVLVGGFRQRFCQQCSRFHE 120

Query: 121 LSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIQKGS-GTQMKD-SVCGQVDDKGRIQ 180
           LSEFDE KRSCRRRLAGHNERRRKISAESNAECSI+KG+ G QMKD SVCGQ DD+GRIQ
Sbjct: 121 LSEFDEMKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGAQMKDSSVCGQADDQGRIQ 180

Query: 181 MTIQENAAYKHFQIR 190
           MTIQENAAYKHFQIR
Sbjct: 181 MTIQENAAYKHFQIR 192

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BLAST of Clc07G02480 vs. NCBI nr
Match: KAG7022956.1 (Squamosa promoter-binding-like protein 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 285.0 bits (728), Expect = 4.6e-73
Identity = 150/175 (85.71%), Postives = 160/175 (91.43%), Query Frame = 0


Query: 21  MEKEKVKKEAMVGDEDGEYDEDKKRKGII--IGGGGSGKKAA--AGGMRCCQAEKCVADL 80
           MEK +VK+  +V DEDGEYDEDKKRKG+I  +GGGGSGKKAA   GGMRCCQAEKC ADL
Sbjct: 1   MEKGRVKEAMVVVDEDGEYDEDKKRKGVIVSVGGGGSGKKAAGGGGGMRCCQAEKCTADL 60

Query: 81  NEAKPYHRRHKVCEVHAKSQVVLVGGFKQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNE 140
           +EAKPYHRRHKVCEVHAKSQVVLVGGF+QRFCQQCSRFHELSEFDE KRSCRRRLAGHNE
Sbjct: 61  SEAKPYHRRHKVCEVHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEMKRSCRRRLAGHNE 120

Query: 141 RRRKISAESNAECSIQKGS-GTQMKD-SVCGQVDDKGRIQMTIQENAAYKHFQIR 190
           RRRKISAESNAECSI+KG+ G QMKD SVCGQ DD+GRIQMTIQENAAYKHFQIR
Sbjct: 121 RRRKISAESNAECSIRKGTGGAQMKDSSVCGQADDQGRIQMTIQENAAYKHFQIR 175

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BLAST of Clc07G02480 vs. ExPASy Swiss-Prot
Match: Q9S7A9 (Squamosa promoter-binding-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=SPL4 PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.3e-33
Identity = 86/175 (49.14%), Postives = 115/175 (65.71%), Query Frame = 0


Query: 18  EREMEKEKVKKEAMVGDEDGEYDEDKKRK-GIIIGGGGSGKKAAAGGMRCCQAEKCVADL 77
           +R   +  +KK++ + +ED E D D++ + G     G  G     G +R CQ ++C AD+
Sbjct: 4   KRSQGQGYMKKKSYLVEEDMETDTDEEEEVGRDRVRGSRGSINRGGSLRLCQVDRCTADM 63

Query: 78  NEAKPYHRRHKVCEVHAKSQVVLVGGFKQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNE 137
            EAK YHRRHKVCEVHAK+  V + G  QRFCQQCSRFH+L EFDEAKRSCRRRLAGHNE
Sbjct: 64  KEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNE 123

Query: 138 RRRKISAESNAECSIQKGSGTQ-MKDSVCGQVDDKGRIQMTI-QENAAYKHFQIR 190
           RRRK S ES    +  +GSG + +   V  Q  ++ R++MT+   N+++K  QIR
Sbjct: 124 RRRKSSGES----TYGEGSGRRGINGQVVMQNQERSRVEMTLPMPNSSFKRPQIR 174

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BLAST of Clc07G02480 vs. ExPASy Swiss-Prot
Match: Q38741 (Squamosa promoter-binding protein 1 OS=Antirrhinum majus OX=4151 GN=SBP1 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.1e-32
Identity = 71/114 (62.28%), Postives = 85/114 (74.56%), Query Frame = 0


Query: 33  GDEDGEYDEDKKRKGIIIGGGGSGKKAAAGGMRCCQAEKCVADLNEAKPYHRRHKVCEVH 92
           G+E+ +  ED K+   +     SGK+A+    R CQ E C A++  AKPYHRRHKVCE H
Sbjct: 21  GEEEDDIGEDSKKTRALT---PSGKRASGSTQRSCQVENCAAEMTNAKPYHRRHKVCEFH 80

Query: 93  AKSQVVLVGGFKQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESN 147
           AK+ VVL  G +QRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRK S +++
Sbjct: 81  AKAPVVLHSGLQQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSHDTH 131

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BLAST of Clc07G02480 vs. ExPASy Swiss-Prot
Match: Q9S758 (Squamosa promoter-binding-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=SPL5 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.1e-32
Identity = 85/167 (50.90%), Postives = 111/167 (66.47%), Query Frame = 0


Query: 24  EKVKKEAMVGDEDGEYDEDKKRKGIIIGGGGSGKKAAAGGMRCCQAEKCVADLNEAKPYH 83
           E+  +  M G+E+   DEDK++K +    G S  +  +   R CQ ++C  +L EAK Y+
Sbjct: 23  EEEMENGMDGEEEDGGDEDKRKKVMERVRGPSTDRVPS---RLCQVDRCTVNLTEAKQYY 82

Query: 84  RRHKVCEVHAKSQVVLVGGFKQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISA 143
           RRH+VCEVHAK+    V G +QRFCQQCSRFHEL EFDEAKRSCRRRLAGHNERRRKIS 
Sbjct: 83  RRHRVCEVHAKASAATVAGVRQRFCQQCSRFHELPEFDEAKRSCRRRLAGHNERRRKISG 142

Query: 144 ESNAECSIQKG-SGTQMKDSVCGQVDDKGRIQMTIQENAAYKHFQIR 190
           +S  E S ++G SG  ++     +VD K  + MT   N+++K  QIR
Sbjct: 143 DSFGEGSGRRGFSGQLIQTQERNRVDRK--LPMT---NSSFKRPQIR 181

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BLAST of Clc07G02480 vs. ExPASy Swiss-Prot
Match: Q9S7P5 (Squamosa promoter-binding-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=SPL12 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-29
Identity = 78/158 (49.37%), Postives = 99/158 (62.66%), Query Frame = 0


Query: 15  QKQEREMEKEKVKKEAMV--GDEDGEYDEDKKRKGIIIGG----GGSGKKAAAGG----- 74
           +++  EMEK+K ++   V   +ED   D+D  R  + +GG    G   KK   GG     
Sbjct: 64  ERRRIEMEKKKKRRAVTVVAMEEDNLKDDDAHRLTLNLGGNNIEGNGVKKTKLGGGIPSR 123

Query: 75  MRCCQAEKCVADLNEAKPYHRRHKVCEVHAKSQVVLVGGFKQRFCQQCSRFHELSEFDEA 134
             CCQ + C ADL++ K YHRRHKVCE+H+K+   LVGG  QRFCQQCSRFH L EFDE 
Sbjct: 124 AICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFDEG 183

Query: 135 KRSCRRRLAGHNERRRKISAESNAECSIQKGSGTQMKD 162
           KRSCRRRLAGHN+RRRK + ++        G+GT M D
Sbjct: 184 KRSCRRRLAGHNKRRRKANPDT-------IGNGTSMSD 214

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BLAST of Clc07G02480 vs. ExPASy Swiss-Prot
Match: Q6Z461 (Squamosa promoter-binding-like protein 13 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL13 PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 7.3e-29
Identity = 62/95 (65.26%), Postives = 74/95 (77.89%), Query Frame = 0


Query: 51  GGGGSGKKAAAGGMRCCQAEKCVADLNEAKPYHRRHKVCEVHAKSQVVLVGGFKQRFCQQ 110
           G  G G  +  GG   CQ E+C  DL+EA  Y+RRHKVC+ H+K  VVLV G +QRFCQQ
Sbjct: 94  GRAGGGAPSGGGGGPRCQVERCGVDLSEAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQ 153

Query: 111 CSRFHELSEFDEAKRSCRRRLAGHNERRRKISAES 146
           CSRFHEL+EFD+AKRSCRRRLAGHNERRRK +A++
Sbjct: 154 CSRFHELTEFDDAKRSCRRRLAGHNERRRKSAADT 188

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BLAST of Clc07G02480 vs. ExPASy TrEMBL
Match: A0A6J1JPM8 (squamosa promoter-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111486359 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.8e-81
Identity = 162/193 (83.94%), Postives = 174/193 (90.16%), Query Frame = 0


Query: 1   MDVGKMETTIIHHHQKQEREMEKEKVKKEAMVGDEDGEYDEDKKRKGII--IGGGGSGKK 60
           MDVGK+ETT   H QKQ   MEK +VK++ +V DEDGEYDEDKKRKG+I  +GGGGSGKK
Sbjct: 1   MDVGKIETT---HQQKQRVVMEKGRVKEDMVVVDEDGEYDEDKKRKGVIVSVGGGGSGKK 60

Query: 61  AA--AGGMRCCQAEKCVADLNEAKPYHRRHKVCEVHAKSQVVLVGGFKQRFCQQCSRFHE 120
           AA   GGMRCCQAEKC ADL+EAKPYHRRHKVCEVHAKSQVVLVGGF+QRFCQQCSRFHE
Sbjct: 61  AAGGGGGMRCCQAEKCTADLSEAKPYHRRHKVCEVHAKSQVVLVGGFRQRFCQQCSRFHE 120

Query: 121 LSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIQKGSGTQMKDSVCGQVDDKGRIQMT 180
           LSEFDE KRSCRRRLAGHNERRRKISAESNAECSI+KG+G QMKDSVCGQ DD+GRIQMT
Sbjct: 121 LSEFDEMKRSCRRRLAGHNERRRKISAESNAECSIRKGTGAQMKDSVCGQADDQGRIQMT 180

Query: 181 IQENAAYKHFQIR 190
           IQENAAYKHFQIR
Sbjct: 181 IQENAAYKHFQIR 190

[Close]

BLAST of Clc07G02480 vs. ExPASy TrEMBL
Match: A0A6J1EWC3 (squamosa promoter-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111437155 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 5.1e-78
Identity = 162/195 (83.08%), Postives = 173/195 (88.72%), Query Frame = 0


Query: 1   MDVGKMETTIIHHHQKQEREMEKEKVKKEAMVGDEDGEYDEDKKRKGII--IGGGGSGKK 60
           MDVGK+ETT   H QKQ   MEK +VK+  +V DEDGEYDEDKKRKG+I  +GGGGSGKK
Sbjct: 1   MDVGKIETT---HQQKQRVVMEKGRVKEAMVVVDEDGEYDEDKKRKGVIVSVGGGGSGKK 60

Query: 61  AA--AGGMRCCQAEKCVADLNEAKPYHRRHKVCEVHAKSQVVLVGGFKQRFCQQCSRFHE 120
           AA   GGMRCCQAEKC ADL+EAKPYHRRHKVCEVHAKSQVVLVGGF+QRFCQQCSRFHE
Sbjct: 61  AAGGGGGMRCCQAEKCTADLSEAKPYHRRHKVCEVHAKSQVVLVGGFRQRFCQQCSRFHE 120

Query: 121 LSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIQKGS-GTQMKD-SVCGQVDDKGRIQ 180
           LSEFDE KRSCRRRLAGHNERRRKISAESNAECSI+KG+ G QMKD SVCGQ DD+GRIQ
Sbjct: 121 LSEFDEMKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGAQMKDSSVCGQADDQGRIQ 180

Query: 181 MTIQENAAYKHFQIR 190
           MTIQENAAYKHFQIR
Sbjct: 181 MTIQENAAYKHFQIR 192

[Close]

BLAST of Clc07G02480 vs. ExPASy TrEMBL
Match: A0A2I4E643 (squamosa promoter-binding protein 1-like OS=Juglans regia OX=51240 GN=LOC108986645 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.7e-60
Identity = 123/174 (70.69%), Postives = 148/174 (85.06%), Query Frame = 0


Query: 17  QEREMEKEKVKKEAMVGDEDGE-YDEDKKRKGIIIGGGGSGKKAAAGGMRCCQAEKCVAD 76
           Q+ E +++ VKKE +  DE+ E  +E+K++KG++ GGGG GKK    G+RCCQAEKC AD
Sbjct: 11  QKMEKQQKVVKKEVVESDEELEGVEEEKRKKGVMDGGGGLGKK-GGNGLRCCQAEKCTAD 70

Query: 77  LNEAKPYHRRHKVCEVHAKSQVVLVGGFKQRFCQQCSRFHELSEFDEAKRSCRRRLAGHN 136
           L++AK YHRRHKVCE HAK+QVVLVGG +QRFCQQCSRFHELSEFDE KRSCRRRLAGHN
Sbjct: 71  LSDAKQYHRRHKVCEFHAKAQVVLVGGIRQRFCQQCSRFHELSEFDETKRSCRRRLAGHN 130

Query: 137 ERRRKISAESNAECSIQKGSGTQMKDSVCGQVDDKGRIQMTIQENAAYKHFQIR 190
           ERRRK SAES+AE S +KG+GTQ+KD VCGQVDD+GRIQ++I EN+ YKHFQIR
Sbjct: 131 ERRRKNSAESHAEGSSRKGTGTQLKDIVCGQVDDRGRIQISIHENSTYKHFQIR 183

[Close]

BLAST of Clc07G02480 vs. ExPASy TrEMBL
Match: A0A6P3Z3U5 (squamosa promoter-binding protein 1-like OS=Ziziphus jujuba OX=326968 GN=LOC107406208 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.6e-58
Identity = 133/202 (65.84%), Postives = 154/202 (76.24%), Query Frame = 0


Query: 1   MDVGKMETTIIHHHQKQEREMEKEK---VKKEAMVGDEDGEY------DEDKKRKGII-I 60
           MD+GK+E        +Q   + KEK   VKKE    + D EY      +EDKKRKG++  
Sbjct: 1   MDLGKIE------RNRQRMVIGKEKVMVVKKE----ERDEEYEQVGCLEEDKKRKGVVGG 60

Query: 61  GGGGSGKKAA---AGGMRCCQAEKCVADLNEAKPYHRRHKVCEVHAKSQVVLVGGFKQRF 120
           GGGGSG+K +    GG+RCCQAEKC ADL +AK YHRRHKVCE+HAK+QVV+VGG +QRF
Sbjct: 61  GGGGSGRKGSGGGVGGLRCCQAEKCTADLTDAKQYHRRHKVCEIHAKAQVVVVGGLRQRF 120

Query: 121 CQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIQKGSGTQMKDSVCGQV 180
           CQQCSRFHELSEFDE KRSCRRRLAGHNERRRK SAES AE S  KGS  Q+KD VCG+V
Sbjct: 121 CQQCSRFHELSEFDETKRSCRRRLAGHNERRRKNSAESPAESSSHKGSSPQLKDIVCGKV 180

Query: 181 DDKGRIQMTIQENAAYKHFQIR 190
           DD+GRIQ++IQENA YKHFQIR
Sbjct: 181 DDRGRIQISIQENATYKHFQIR 192

[Close]

BLAST of Clc07G02480 vs. ExPASy TrEMBL
Match: A0A5B7BBG5 (SBP-type domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_034224 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 5.0e-57
Identity = 124/181 (68.51%), Postives = 145/181 (80.11%), Query Frame = 0


Query: 23  KEKVKKEAMVG---DED---GEYDEDKKRKGIIIGGGGSGKKAAAGG--------MRCCQ 82
           KEKVKKEA      D+D   G  ++DKK++G    GGGSGKK + GG        MRCCQ
Sbjct: 14  KEKVKKEAAEAEDLDDDECLGASEDDKKKRG-GSSGGGSGKKGSGGGGGGGGASTMRCCQ 73

Query: 83  AEKCVADLNEAKPYHRRHKVCEVHAKSQVVLVGGFKQRFCQQCSRFHELSEFDEAKRSCR 142
           AEKC ADL++AK YHRRH+VCE HAK+QVV+V G +QRFCQQCSRFHE+SEFDEAKRSCR
Sbjct: 74  AEKCTADLSDAKQYHRRHRVCEHHAKAQVVIVAGIRQRFCQQCSRFHEISEFDEAKRSCR 133

Query: 143 RRLAGHNERRRKISAESNAECSIQKGSGTQMKDSVCGQVDDKGRIQMTIQENAAYKHFQI 190
           RRLAGHNERRRK S++S AE S +KG+GTQ+K+ VCGQVDD+GRIQ+TIQENA YKHFQI
Sbjct: 134 RRLAGHNERRRKNSSDSQAEGSSRKGTGTQLKEIVCGQVDDRGRIQITIQENATYKHFQI 193

[Close]

BLAST of Clc07G02480 vs. TAIR 10
Match: AT1G53160.2 (squamosa promoter binding protein-like 4 )

HSP 1 Score: 144.4 bits (363), Expect = 9.1e-35
Identity = 86/175 (49.14%), Postives = 115/175 (65.71%), Query Frame = 0


Query: 18  EREMEKEKVKKEAMVGDEDGEYDEDKKRK-GIIIGGGGSGKKAAAGGMRCCQAEKCVADL 77
           +R   +  +KK++ + +ED E D D++ + G     G  G     G +R CQ ++C AD+
Sbjct: 4   KRSQGQGYMKKKSYLVEEDMETDTDEEEEVGRDRVRGSRGSINRGGSLRLCQVDRCTADM 63

Query: 78  NEAKPYHRRHKVCEVHAKSQVVLVGGFKQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNE 137
            EAK YHRRHKVCEVHAK+  V + G  QRFCQQCSRFH+L EFDEAKRSCRRRLAGHNE
Sbjct: 64  KEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNE 123

Query: 138 RRRKISAESNAECSIQKGSGTQ-MKDSVCGQVDDKGRIQMTI-QENAAYKHFQIR 190
           RRRK S ES    +  +GSG + +   V  Q  ++ R++MT+   N+++K  QIR
Sbjct: 124 RRRKSSGES----TYGEGSGRRGINGQVVMQNQERSRVEMTLPMPNSSFKRPQIR 174

[Close]

BLAST of Clc07G02480 vs. TAIR 10
Match: AT1G53160.1 (squamosa promoter binding protein-like 4 )

HSP 1 Score: 144.4 bits (363), Expect = 9.1e-35
Identity = 86/175 (49.14%), Postives = 115/175 (65.71%), Query Frame = 0


Query: 18  EREMEKEKVKKEAMVGDEDGEYDEDKKRK-GIIIGGGGSGKKAAAGGMRCCQAEKCVADL 77
           +R   +  +KK++ + +ED E D D++ + G     G  G     G +R CQ ++C AD+
Sbjct: 4   KRSQGQGYMKKKSYLVEEDMETDTDEEEEVGRDRVRGSRGSINRGGSLRLCQVDRCTADM 63

Query: 78  NEAKPYHRRHKVCEVHAKSQVVLVGGFKQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNE 137
            EAK YHRRHKVCEVHAK+  V + G  QRFCQQCSRFH+L EFDEAKRSCRRRLAGHNE
Sbjct: 64  KEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNE 123

Query: 138 RRRKISAESNAECSIQKGSGTQ-MKDSVCGQVDDKGRIQMTI-QENAAYKHFQIR 190
           RRRK S ES    +  +GSG + +   V  Q  ++ R++MT+   N+++K  QIR
Sbjct: 124 RRRKSSGES----TYGEGSGRRGINGQVVMQNQERSRVEMTLPMPNSSFKRPQIR 174

[Close]

BLAST of Clc07G02480 vs. TAIR 10
Match: AT3G15270.1 (squamosa promoter binding protein-like 5 )

HSP 1 Score: 139.8 bits (351), Expect = 2.2e-33
Identity = 85/167 (50.90%), Postives = 111/167 (66.47%), Query Frame = 0


Query: 24  EKVKKEAMVGDEDGEYDEDKKRKGIIIGGGGSGKKAAAGGMRCCQAEKCVADLNEAKPYH 83
           E+  +  M G+E+   DEDK++K +    G S  +  +   R CQ ++C  +L EAK Y+
Sbjct: 23  EEEMENGMDGEEEDGGDEDKRKKVMERVRGPSTDRVPS---RLCQVDRCTVNLTEAKQYY 82

Query: 84  RRHKVCEVHAKSQVVLVGGFKQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISA 143
           RRH+VCEVHAK+    V G +QRFCQQCSRFHEL EFDEAKRSCRRRLAGHNERRRKIS 
Sbjct: 83  RRHRVCEVHAKASAATVAGVRQRFCQQCSRFHELPEFDEAKRSCRRRLAGHNERRRKISG 142

Query: 144 ESNAECSIQKG-SGTQMKDSVCGQVDDKGRIQMTIQENAAYKHFQIR 190
           +S  E S ++G SG  ++     +VD K  + MT   N+++K  QIR
Sbjct: 143 DSFGEGSGRRGFSGQLIQTQERNRVDRK--LPMT---NSSFKRPQIR 181

[Close]

BLAST of Clc07G02480 vs. TAIR 10
Match: AT3G60030.1 (squamosa promoter-binding protein-like 12 )

HSP 1 Score: 131.3 bits (329), Expect = 8.0e-31
Identity = 78/158 (49.37%), Postives = 99/158 (62.66%), Query Frame = 0


Query: 15  QKQEREMEKEKVKKEAMV--GDEDGEYDEDKKRKGIIIGG----GGSGKKAAAGG----- 74
           +++  EMEK+K ++   V   +ED   D+D  R  + +GG    G   KK   GG     
Sbjct: 64  ERRRIEMEKKKKRRAVTVVAMEEDNLKDDDAHRLTLNLGGNNIEGNGVKKTKLGGGIPSR 123

Query: 75  MRCCQAEKCVADLNEAKPYHRRHKVCEVHAKSQVVLVGGFKQRFCQQCSRFHELSEFDEA 134
             CCQ + C ADL++ K YHRRHKVCE+H+K+   LVGG  QRFCQQCSRFH L EFDE 
Sbjct: 124 AICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFDEG 183

Query: 135 KRSCRRRLAGHNERRRKISAESNAECSIQKGSGTQMKD 162
           KRSCRRRLAGHN+RRRK + ++        G+GT M D
Sbjct: 184 KRSCRRRLAGHNKRRRKANPDT-------IGNGTSMSD 214

[Close]

BLAST of Clc07G02480 vs. TAIR 10
Match: AT2G47070.1 (squamosa promoter binding protein-like 1 )

HSP 1 Score: 122.1 bits (305), Expect = 4.8e-28
Identity = 66/122 (54.10%), Postives = 78/122 (63.93%), Query Frame = 0


Query: 42  DKKRKGIIIGGGGSG----------------KKAAAGGMRCCQAEKCVADLNEAKPYHRR 101
           DKKR+ + I G  +G                KK  +G +  CQ E C ADL++ K YHRR
Sbjct: 67  DKKRRAVAIQGDTNGALTLNLNGESDGLFPAKKTKSGAV--CQVENCEADLSKVKDYHRR 126

Query: 102 HKVCEVHAKSQVVLVGGFKQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAES 148
           HKVCE+H+K+    VGG  QRFCQQCSRFH L EFDE KRSCRRRLAGHN+RRRK + E 
Sbjct: 127 HKVCEMHSKATSATVGGILQRFCQQCSRFHLLQEFDEGKRSCRRRLAGHNKRRRKTNPEP 186

The following BLAST results are available for this feature:

BLAST of Clc07G02480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888920.1	5.6e-87	89.01	squamosa promoter-binding protein 1-like [Benincasa hispida]	[more]
XP_022989218.1	7.9e-81	83.94	squamosa promoter-binding protein 1-like [Cucurbita maxima]	[more]
XP_023531078.1	8.1e-78	82.47	squamosa promoter-binding protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022930778.1	1.1e-77	83.08	squamosa promoter-binding protein 1-like [Cucurbita moschata] >KAG6589255.1 Squa...	[more]
KAG7022956.1	4.6e-73	85.71	Squamosa promoter-binding-like protein 4 [Cucurbita argyrosperma subsp. argyrosp...	[more]

BLAST of Clc07G02480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7A9	1.3e-33	49.14	Squamosa promoter-binding-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=SPL4...	[more]
Q38741	1.1e-32	62.28	Squamosa promoter-binding protein 1 OS=Antirrhinum majus OX=4151 GN=SBP1 PE=2 SV...	[more]
Q9S758	3.1e-32	50.90	Squamosa promoter-binding-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=SPL5...	[more]
Q9S7P5	1.1e-29	49.37	Squamosa promoter-binding-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=SPL...	[more]
Q6Z461	7.3e-29	65.26	Squamosa promoter-binding-like protein 13 OS=Oryza sativa subsp. japonica OX=399...	[more]

BLAST of Clc07G02480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JPM8	3.8e-81	83.94	squamosa promoter-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1EWC3	5.1e-78	83.08	squamosa promoter-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A2I4E643	3.7e-60	70.69	squamosa promoter-binding protein 1-like OS=Juglans regia OX=51240 GN=LOC1089866...	[more]
A0A6P3Z3U5	1.6e-58	65.84	squamosa promoter-binding protein 1-like OS=Ziziphus jujuba OX=326968 GN=LOC1074...	[more]
A0A5B7BBG5	5.0e-57	68.51	SBP-type domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_034224...	[more]

BLAST of Clc07G02480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53160.2	9.1e-35	49.14	squamosa promoter binding protein-like 4	[more]
AT1G53160.1	9.1e-35	49.14	squamosa promoter binding protein-like 4	[more]
AT3G15270.1	2.2e-33	50.90	squamosa promoter binding protein-like 5	[more]
AT3G60030.1	8.0e-31	49.37	squamosa promoter-binding protein-like 12	[more]
AT2G47070.1	4.8e-28	54.10	squamosa promoter binding protein-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 59..128 e-value: 2.3E-30 score: 106.5
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 65..144
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 67..140 e-value: 2.7E-31 score: 107.7
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 64..141 score: 31.726831
None	No IPR available	PIRSR	PIRSR037575-1	PIRSR037575-1	coord: 59..141 e-value: 3.1E-46 score: 152.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	PANTHER	PTHR31251:SF149	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN	coord: 14..189
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 14..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G02480.1	Clc07G02480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding