Clc07G01630 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G01630
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	S-protein homolog
Location	ClcChr07: 1720996 .. 1722649 (-)
RNA-Seq Expression	Clc07G01630
Synteny	Clc07G01630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGATGAATAACCTCAAATATTCCATGGCTTTATTTTGGGTTATCATGGCATTATTAGCCATGGTTCAAACAAGCTTTGCGGCTCCATTTCAGCATTGGACTGTGCAAATATCCAATGACATGCAAAGCAAACAAACCTTGTTTCTTCATTGCAAGTCAAAAGACAATGATTTGGGACAACAAAATCTAGGATTTGAGCAAACATTTTCATGGAAATTCAGAGAGAATTTGTGGCAAACAACATTGTATTGGTGCTACATGCACAAGAAAGAACAAAATCATATTGCTTTAGAAGTGTTTTGGCCAGAATCAGAGTCTAAATCTTGGCTTTCCCATAGATGTGAAGGTGAAGGGTGCTTTTGGTCAGTAAGAGATGATGGAATTTATGTAAAAAATAATCCTGAAAATAAGTTTGAGTTTCATGCCAAATGGTTGCCTGGTTGGTAAAGTACTTATGAAAGGAAAAAAGGAATATTATTGGTAGCTAGGCTACATTTCTCAAAACTATTATTCTAGGGGGATGCAAGGATGAATTCATGTTATTGTTACGGTATGTATGATGTTCTATGAATAAAATATAAAAACTCAGAAGTTTTTTTTCCCATTTCAAGATCTCAACACACATTCAATCTATACAGAACATTTCAAAATTTAATTGGCAATGAAAGAAATAACTCAGGTAACTTATAAAGATTGGTAAGGTGTCCTCACTTCTCTAATATGAAATTCCGATCAAACATGCCCCGTTCAAGTTTAGAGGAATTGTAACAACCCCAAACCCTTGAGGTAAATTCCCCTAATCAATTAAATTAAGTCATTTTGCATAAAAAGGAAATTTTAATTATTCATATGCATTATTGTATTTACTTAAGTTAAATAGGAAAGTTCCAAAAAAAAATTGTATTTATGGTGGTTAGAGAATTAAAGGTGGAATTAAAGAAAATGTTAGATTTTTTGGTAAATAATAATTTATTCTTATTCTATTTTAGGGCAAATAGAATAGAACAAATATTTTGGTGAAATAAAGGATATTATTTTTTACCTTAATTGGTTAAAAGGAAAATTGGAAAAATTAGGGTTTAAGGAGGGAGAGGGATTACCTCGTTTTCTGTGCAGTCAAAAAGAAAAAGAAAAGAAAATAATTCTCTCTCTCTGCCGCATCTCTCGCTCTCCCCCTTCCTTCCTTTCGCCGTCGCCGCCGCCGCCTCTCCCAACCTCCCGCTGCTCCGTCATCTCTCTCTCTCTCTCGCTCTCCATCAGTTTCCGGGAGTTCCCGGATGTTTCACTCGTCGGGTGTCGCGGGTTTCGCCTTGAGTGTCGTTGTCGGCATTCAACTCTCGCTAGCTGTCTCGCTCTCCCGCTCTCACTTTCTTCCCTCGCTTCACGGTCTCCCGCGCCTAAAGAGCACTGTCGCTCTCGTGGTATCGCTCTCCCGCTAGCTCTCGCGCTCTCGCTCTCTCGCTCGACCCACGCTTTCCTTGCGCCCAGTGTCGCCGCAGCCTCGGGCTCTCGCTCTCTCGCCGGTTTCGCTGTCTCGGCTCTCGCGCTCTCGCTCAAGTCTCGCTTCTCGCTCGGGAGTCATTCTCTCTCGGATTTTTGGCTCTCGGCAACGGTTCCTTTCTTGTCCGGCCAGAACAGTACCTTTAAGTGA

mRNA sequence

ATGGTGATGAATAACCTCAAATATTCCATGGCTTTATTTTGGGTTATCATGGCATTATTAGCCATGGTTCAAACAAGCTTTGCGGCTCCATTTCAGCATTGGACTGTGCAAATATCCAATGACATGCAAAGCAAACAAACCTTGTTTCTTCATTGCAAGTCAAAAGACAATGATTTGGGACAACAAAATCTAGGATTTGAGCAAACATTTTCATGGAAATTCAGAGAGAATTTGTGGCAAACAACATTGTATTGGTGCTACATGCACAAGAAAGAACAAAATCATATTGCTTTAGAAGTGTTTTGGCCAGAATCAGAGTCTAAATCTTGGCTTTCCCATAGATGTGAAGGTGAAGGGTGCTTTTGTCAAAAAGAAAAAGAAAAGAAAATAATTCTCTCTCTCTGCCGCATCTCTCGCTCTCCCCCTTCCTTCCTTTCGCCGTCGCCGCCGCCGCCTCTCCCAACCTCCCGCTGCTCCGTCATCTCTCTCTCTCTCTCGCTCTCCATCAGTTTCCGGGAGTTCCCGGATGTTTCACTCGTCGGGTGTCGCGGGTTTCGCCTTGAGTGTCGTTGTCGGCATTCAACTCTCGCTAGCTGTCTCGCTCTCCCGCTCTCACTTTCTTCCCTCGCTTCACGGTCTCCCGCGCCTAAAGAGCACTGTCGCTCTCGTGGTATCGCTCTCCCGCTAGCTCTCGCGCTCTCGCTCTCTCGCTCGACCCACGCTTTCCTTGCGCCCAGTGTCGCCGCAGCCTCGGGCTCTCGCTCTCTCGCCGGTTTCGCTGTCTCGGCTCTCGCGCTCTCGCTCAAGTCTCGCTTCTCGCTCGGGAGTCATTCTCTCTCGGATTTTTGGCTCTCGGCAACGGTTCCTTTCTTGTCCGGCCAGAACAGTACCTTTAAGTGA

Coding sequence (CDS)

ATGGTGATGAATAACCTCAAATATTCCATGGCTTTATTTTGGGTTATCATGGCATTATTAGCCATGGTTCAAACAAGCTTTGCGGCTCCATTTCAGCATTGGACTGTGCAAATATCCAATGACATGCAAAGCAAACAAACCTTGTTTCTTCATTGCAAGTCAAAAGACAATGATTTGGGACAACAAAATCTAGGATTTGAGCAAACATTTTCATGGAAATTCAGAGAGAATTTGTGGCAAACAACATTGTATTGGTGCTACATGCACAAGAAAGAACAAAATCATATTGCTTTAGAAGTGTTTTGGCCAGAATCAGAGTCTAAATCTTGGCTTTCCCATAGATGTGAAGGTGAAGGGTGCTTTTGTCAAAAAGAAAAAGAAAAGAAAATAATTCTCTCTCTCTGCCGCATCTCTCGCTCTCCCCCTTCCTTCCTTTCGCCGTCGCCGCCGCCGCCTCTCCCAACCTCCCGCTGCTCCGTCATCTCTCTCTCTCTCTCGCTCTCCATCAGTTTCCGGGAGTTCCCGGATGTTTCACTCGTCGGGTGTCGCGGGTTTCGCCTTGAGTGTCGTTGTCGGCATTCAACTCTCGCTAGCTGTCTCGCTCTCCCGCTCTCACTTTCTTCCCTCGCTTCACGGTCTCCCGCGCCTAAAGAGCACTGTCGCTCTCGTGGTATCGCTCTCCCGCTAGCTCTCGCGCTCTCGCTCTCTCGCTCGACCCACGCTTTCCTTGCGCCCAGTGTCGCCGCAGCCTCGGGCTCTCGCTCTCTCGCCGGTTTCGCTGTCTCGGCTCTCGCGCTCTCGCTCAAGTCTCGCTTCTCGCTCGGGAGTCATTCTCTCTCGGATTTTTGGCTCTCGGCAACGGTTCCTTTCTTGTCCGGCCAGAACAGTACCTTTAAGTGA

Protein sequence

MVMNNLKYSMALFWVIMALLAMVQTSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKSWLSHRCEGEGCFCQKEKEKKIILSLCRISRSPPSFLSPSPPPPLPTSRCSVISLSLSLSISFREFPDVSLVGCRGFRLECRCRHSTLASCLALPLSLSSLASRSPAPKEHCRSRGIALPLALALSLSRSTHAFLAPSVAAASGSRSLAGFAVSALALSLKSRFSLGSHSLSDFWLSATVPFLSGQNSTFK

Homology

[Close]

BLAST of Clc07G01630 vs. NCBI nr
Match: KAE8650840.1 (hypothetical protein Csa_017632 [Cucumis sativus])

HSP 1 Score: 139.8 bits (351), Expect = 3.8e-29
Identity = 69/122 (56.56%), Postives = 89/122 (72.95%), Query Frame = 0


Query: 1   MVMNNLKYSMALF-WVIMALLAMVQTSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDL 60
           M++ NLK+   L   VI +LL ++QTS  AP +HW VQ+ N+MQ  Q+L LHCKSKD+D 
Sbjct: 2   MMIMNLKHCKGLLVLVITSLLIVIQTSDGAPLEHWAVQVKNEMQG-QSLLLHCKSKDDDF 61

Query: 61  GQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKSWLSHRCEGEG 120
           G+Q L   Q+FSWKFRENLWQ TLYWCYM   + NH++LEVFWPE+ SK +LS+RC    
Sbjct: 62  GKQILKQGQSFSWKFRENLWQNTLYWCYM-SNDHNHVSLEVFWPEAASKPYLSYRCRDNV 121

Query: 121 CF 122
           C+
Sbjct: 122 CY 121

[Close]

BLAST of Clc07G01630 vs. NCBI nr
Match: XP_004136434.3 (S-protein homolog 1-like [Cucumis sativus])

HSP 1 Score: 118.6 bits (296), Expect = 9.1e-23
Identity = 63/120 (52.50%), Postives = 77/120 (64.17%), Query Frame = 0


Query: 3   MNNLKYSMALFWVIMALLAMV--QTSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLG 62
           M  LKY +A+  VI+AL+     Q     P   W + I N+M +K TLFL CKSKD+DLG
Sbjct: 1   MEALKY-IAIVCVILALIGECNGQPGAEVPLSSWKINILNEM-TKDTLFLQCKSKDDDLG 60

Query: 63  QQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKSWLSHRCEGEGC 121
            QNLG +Q FSW F+ENLWQTTLYWCYMH  E +H +  VFWP  E   WL+ RC+   C
Sbjct: 61  AQNLGVKQQFSWSFKENLWQTTLYWCYMHNAE-SHASFNVFWP--EKSGWLAFRCQLRNC 115

[Close]

BLAST of Clc07G01630 vs. NCBI nr
Match: KGN60342.2 (hypothetical protein Csa_002569, partial [Cucumis sativus])

HSP 1 Score: 118.6 bits (296), Expect = 9.1e-23
Identity = 63/120 (52.50%), Postives = 77/120 (64.17%), Query Frame = 0


Query: 3   MNNLKYSMALFWVIMALLAMV--QTSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLG 62
           M  LKY +A+  VI+AL+     Q     P   W + I N+M +K TLFL CKSKD+DLG
Sbjct: 11  MEALKY-IAIVCVILALIGECNGQPGAEVPLSSWKINILNEM-TKDTLFLQCKSKDDDLG 70

Query: 63  QQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKSWLSHRCEGEGC 121
            QNLG +Q FSW F+ENLWQTTLYWCYMH  E +H +  VFWP  E   WL+ RC+   C
Sbjct: 71  AQNLGVKQQFSWSFKENLWQTTLYWCYMHNAE-SHASFNVFWP--EKSGWLAFRCQLRNC 125

[Close]

BLAST of Clc07G01630 vs. NCBI nr
Match: KAE8651384.1 (hypothetical protein Csa_001671 [Cucumis sativus])

HSP 1 Score: 113.2 bits (282), Expect = 3.8e-21
Identity = 60/120 (50.00%), Postives = 77/120 (64.17%), Query Frame = 0


Query: 3   MNNLKYSMALFWVIMALLAMV--QTSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLG 62
           M  LKY +A+  VI+AL+     Q     P   W V I N+M +K +LF+ CKSKD+DLG
Sbjct: 76  MEALKY-IAVVGVILALIGECNGQPGAEVPLSSWKVNILNEM-TKDSLFIRCKSKDDDLG 135

Query: 63  QQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKSWLSHRCEGEGC 121
            QNLG +Q FSW F+ENLWQTTLYWCYMH   ++H +  V+WP  E   WL+ RC+   C
Sbjct: 136 AQNLGVKQQFSWSFKENLWQTTLYWCYMH-NAKSHASFNVYWP--ERSGWLAFRCQLRNC 190

[Close]

BLAST of Clc07G01630 vs. NCBI nr
Match: XP_004136435.1 (S-protein homolog 1-like [Cucumis sativus])

HSP 1 Score: 113.2 bits (282), Expect = 3.8e-21
Identity = 60/120 (50.00%), Postives = 77/120 (64.17%), Query Frame = 0


Query: 3   MNNLKYSMALFWVIMALLAMV--QTSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLG 62
           M  LKY +A+  VI+AL+     Q     P   W V I N+M +K +LF+ CKSKD+DLG
Sbjct: 1   MEALKY-IAVVGVILALIGECNGQPGAEVPLSSWKVNILNEM-TKDSLFIRCKSKDDDLG 60

Query: 63  QQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKSWLSHRCEGEGC 121
            QNLG +Q FSW F+ENLWQTTLYWCYMH   ++H +  V+WP  E   WL+ RC+   C
Sbjct: 61  AQNLGVKQQFSWSFKENLWQTTLYWCYMH-NAKSHASFNVYWP--ERSGWLAFRCQLRNC 115

[Close]

BLAST of Clc07G01630 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.0e-16
Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 0


Query: 34  WTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQ 93
           W V ++N + + +TLF+HCKSK+NDLG  NL F   FSW F EN+  +TL+WCYM  K+ 
Sbjct: 41  WQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYM-SKDD 100

Query: 94  NHIALEVFWPESESKSWLSHRCEGEGC 121
            H+ ++VFW +      L HRC+ + C
Sbjct: 101 GHMNVKVFWDD----VILFHRCDWKNC 122

[Close]

BLAST of Clc07G01630 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.9e-15
Identity = 38/87 (43.68%), Postives = 55/87 (63.22%), Query Frame = 0


Query: 34  WTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQ 93
           W V + N + + +TLF+HCKSK++DLG+ NL F   FSW F EN+  +T +WCYM+ K+ 
Sbjct: 41  WQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMN-KDN 100

Query: 94  NHIALEVFWPESESKSWLSHRCEGEGC 121
            H+ + VFW +      L HRC  + C
Sbjct: 101 GHMNVNVFWDD----VILFHRCGWKNC 122

[Close]

BLAST of Clc07G01630 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 9.5e-07
Identity = 30/96 (31.25%), Postives = 54/96 (56.25%), Query Frame = 0


Query: 25  TSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLY 84
           T+   P    TV+I+ND+ ++ TL  HCKSKD+DLG + L   +++S+ F    +  TLY
Sbjct: 39  TNSVFPTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLY 98

Query: 85  WCYMHKKEQNHIALEVFWPESESKSWLSHRCEGEGC 121
           +C      ++H + +++    +S     ++CE + C
Sbjct: 99  FCSFSWPNESH-SFDIYKDHRDSGG--DNKCESDRC 131

[Close]

BLAST of Clc07G01630 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.8e-06
Identity = 29/88 (32.95%), Postives = 50/88 (56.82%), Query Frame = 0


Query: 35  TVQISNDM--QSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHK-- 94
           T+ + N++  ++K  L +HCKSK+ND+G + L   +  S+ F+ N W TT +WC ++K  
Sbjct: 25  TITVKNELNPKNKNILKVHCKSKNNDIGVKYLKIGEVMSFSFKTNFWGTTEFWCNLYKGP 84

Query: 95  --KEQNHI----ALEVFWPESESKSWLS 113
             K    I    A+ +F  +  S +WL+
Sbjct: 85  DYKRYRGITAYQAIGLFAKDGSSYNWLA 112

[Close]

BLAST of Clc07G01630 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.4e-05
Identity = 31/83 (37.35%), Postives = 49/83 (59.04%), Query Frame = 0


Query: 6  LKYSMALFWVIMALLAMVQTSFAA--PFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQN 65
          +K S  +F V+  +L  V +S     PF    V ++N++  + TL + C+SKD+DLG+  
Sbjct: 1  MKNSSKIFVVLSIILFYVISSCHGYNPFAKTVVTVTNNISPQTTLTISCRSKDDDLGEHL 60

Query: 66 LGFEQTFSWKFRENLWQTTLYWC 87
          L   Q F WKFR + ++TTL+ C
Sbjct: 61 LLHGQAFLWKFRPSWFRTTLFTC 83

[Close]

BLAST of Clc07G01630 vs. ExPASy TrEMBL
Match: A0A6J1CRU0 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013603 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-18
Identity = 47/120 (39.17%), Postives = 72/120 (60.00%), Query Frame = 0


Query: 1   MVMNNLKYSMALFWVIMALLAMVQTSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLG 60
           M + + K    +F ++++L+ +      +  + W + + N + + QTLF+HCKSKDNDLG
Sbjct: 5   MGVRSTKKHFLVFLLVLSLVILEPIEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLG 64

Query: 61  QQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKSWLSHRCEGEGC 120
           + NL     F+W FR NLW TTL+WCY+HK +    + +VFW E +S  WL +RC    C
Sbjct: 65  EHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKS-IWLFYRCYHSNC 123

[Close]

BLAST of Clc07G01630 vs. ExPASy TrEMBL
Match: A0A6J1CQW3 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013499 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.9e-18
Identity = 48/111 (43.24%), Postives = 64/111 (57.66%), Query Frame = 0


Query: 16  IMALLAMVQTSFAAPFQH------WTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQT 75
           ++ L+AMV    +    H      W V I N + S QTLF+HCKSKD+DLG  NL     
Sbjct: 7   LLILVAMVLVCSSTTTAHSTWPNKWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAK 66

Query: 76  FSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKSWLSHRCEGEGC 121
           F W FR+NLW TTL+WCYM K +  + + EV+W +   + WL + C  E C
Sbjct: 67  FGWNFRDNLWGTTLFWCYMRKPDNANASFEVYWDDKSKEQWLYNFCNWEDC 117

[Close]

BLAST of Clc07G01630 vs. ExPASy TrEMBL
Match: A0A5E4EJG4 (S-protein homolog OS=Prunus dulcis OX=3755 GN=ALMOND_2B017645 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.5e-18
Identity = 50/113 (44.25%), Postives = 73/113 (64.60%), Query Frame = 0


Query: 12  LFWVIMALLAMVQTSFAAP----FQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFE 71
           +F+V +A+LA+      +P    +  W V + N++ + +TLF HCKSKD+DLG++NL   
Sbjct: 9   VFFVCVAILALSAPCLGSPVGIRYNTWHVHVVNNLSAGKTLFAHCKSKDDDLGERNLAPG 68

Query: 72  QTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKSWLSHRCEGEGC 121
             F+W F+EN + TTLYWCYM   +Q H AL+VFW E +  SWL +RC  + C
Sbjct: 69  TEFNWSFKENFFGTTLYWCYM-STDQKHAALDVFWVEGD-HSWLQYRCNWKDC 119

[Close]

BLAST of Clc07G01630 vs. ExPASy TrEMBL
Match: A0A251N118 (S-protein homolog OS=Prunus persica OX=3760 GN=PRUPE_8G208300 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.5e-18
Identity = 50/112 (44.64%), Postives = 73/112 (65.18%), Query Frame = 0


Query: 12  LFWVIMALLAMVQTSFAAP---FQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQ 71
           +F+V +A+LA+      +P   +  W V + N++ + +TLF HCKSKD+DLG++NL    
Sbjct: 9   VFFVCVAILALSAPCLGSPGIRYNKWHVHVVNNLGAGKTLFAHCKSKDDDLGERNLAPGT 68

Query: 72  TFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKSWLSHRCEGEGC 121
            F+W F+EN + TTLYWCYM   +Q H AL+VFW E +  SWL +RC  + C
Sbjct: 69  EFNWSFKENFFGTTLYWCYM-STDQKHAALDVFWVEGD-HSWLQYRCNWKDC 118

[Close]

BLAST of Clc07G01630 vs. ExPASy TrEMBL
Match: A0A6J1CPR8 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013612 PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.3e-18
Identity = 43/109 (39.45%), Postives = 68/109 (62.39%), Query Frame = 0


Query: 12  LFWVIMALLAMVQTSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFS 71
           L ++ ++ LA+V+   A P   W + + N++ + Q LF+HCKSK++DLG+ NL     F+
Sbjct: 10  LVFLFVSSLAIVEQIEAVPLSKWQIHVRNELSNTQMLFVHCKSKNDDLGEHNLSVGTEFN 69

Query: 72  WKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKSWLSHRCEGEGC 121
           W+FR N+W TTLYWCY+ K     ++ + FW E +S  WL ++C    C
Sbjct: 70  WRFRVNIWDTTLYWCYLQKPNGQSVSFDAFWVEKDS-IWLYYKCLESNC 117

[Close]

BLAST of Clc07G01630 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 89.0 bits (219), Expect = 7.2e-18
Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 0


Query: 34  WTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQ 93
           W V ++N + + +TLF+HCKSK+NDLG  NL F   FSW F EN+  +TL+WCYM  K+ 
Sbjct: 41  WQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYM-SKDD 100

Query: 94  NHIALEVFWPESESKSWLSHRCEGEGC 121
            H+ ++VFW +      L HRC+ + C
Sbjct: 101 GHMNVKVFWDD----VILFHRCDWKNC 122

[Close]

BLAST of Clc07G01630 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 84.7 bits (208), Expect = 1.3e-16
Identity = 38/87 (43.68%), Postives = 55/87 (63.22%), Query Frame = 0


Query: 34  WTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQ 93
           W V + N + + +TLF+HCKSK++DLG+ NL F   FSW F EN+  +T +WCYM+ K+ 
Sbjct: 41  WQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMN-KDN 100

Query: 94  NHIALEVFWPESESKSWLSHRCEGEGC 121
            H+ + VFW +      L HRC  + C
Sbjct: 101 GHMNVNVFWDD----VILFHRCGWKNC 122

[Close]

BLAST of Clc07G01630 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 55.8 bits (133), Expect = 6.7e-08
Identity = 30/96 (31.25%), Postives = 54/96 (56.25%), Query Frame = 0


Query: 25  TSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLY 84
           T+   P    TV+I+ND+ ++ TL  HCKSKD+DLG + L   +++S+ F    +  TLY
Sbjct: 39  TNSVFPTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLY 98

Query: 85  WCYMHKKEQNHIALEVFWPESESKSWLSHRCEGEGC 121
           +C      ++H + +++    +S     ++CE + C
Sbjct: 99  FCSFSWPNESH-SFDIYKDHRDSGG--DNKCESDRC 131

[Close]

BLAST of Clc07G01630 vs. TAIR 10
Match: AT3G26880.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 54.3 bits (129), Expect = 2.0e-07
Identity = 29/88 (32.95%), Postives = 50/88 (56.82%), Query Frame = 0


Query: 35  TVQISNDM--QSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHK-- 94
           T+ + N++  ++K  L +HCKSK+ND+G + L   +  S+ F+ N W TT +WC ++K  
Sbjct: 25  TITVKNELNPKNKNILKVHCKSKNNDIGVKYLKIGEVMSFSFKTNFWGTTEFWCNLYKGP 84

Query: 95  --KEQNHI----ALEVFWPESESKSWLS 113
             K    I    A+ +F  +  S +WL+
Sbjct: 85  DYKRYRGITAYQAIGLFAKDGSSYNWLA 112

[Close]

BLAST of Clc07G01630 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 52.4 bits (124), Expect = 7.4e-07
Identity = 34/108 (31.48%), Postives = 56/108 (51.85%), Query Frame = 0


Query: 3   MNNLKYSMALFWVIMALLAMVQTSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQ 62
           MNNL     +F +++ L   V  +F        V +SN ++  + L +HC+SKD+DLG+ 
Sbjct: 1   MNNL----FIFSIVIGLCIGVSNAF-HEIGESKVVLSNQLEHSKLLKVHCRSKDDDLGEH 60

Query: 63  NLGFEQTFSWKFRENLWQTTLYWCYM-----HKKEQNHIALEVFWPES 106
            L   Q + + F +N+WQTT + C M      K   + +A E  W ++
Sbjct: 61  ILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFKHHLDFVAYETSWSKA 103

The following BLAST results are available for this feature:

BLAST of Clc07G01630 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650840.1	3.8e-29	56.56	hypothetical protein Csa_017632 [Cucumis sativus]	[more]
XP_004136434.3	9.1e-23	52.50	S-protein homolog 1-like [Cucumis sativus]	[more]
KGN60342.2	9.1e-23	52.50	hypothetical protein Csa_002569, partial [Cucumis sativus]	[more]
KAE8651384.1	3.8e-21	50.00	hypothetical protein Csa_001671 [Cucumis sativus]	[more]
XP_004136435.1	3.8e-21	50.00	S-protein homolog 1-like [Cucumis sativus]	[more]

BLAST of Clc07G01630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2HQ46	1.0e-16	45.98	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
F4JLS0	1.9e-15	43.68	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
F4JLQ5	9.5e-07	31.25	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
Q9LW22	2.8e-06	32.95	S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1	[more]
P0DN93	1.4e-05	37.35	S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1	[more]

BLAST of Clc07G01630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CRU0	1.1e-18	39.17	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013603 PE=3 SV=1	[more]
A0A6J1CQW3	1.9e-18	43.24	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013499 PE=3 SV=1	[more]
A0A5E4EJG4	2.5e-18	44.25	S-protein homolog OS=Prunus dulcis OX=3755 GN=ALMOND_2B017645 PE=3 SV=1	[more]
A0A251N118	2.5e-18	44.64	S-protein homolog OS=Prunus persica OX=3760 GN=PRUPE_8G208300 PE=3 SV=1	[more]
A0A6J1CPR8	3.3e-18	39.45	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013612 PE=3 SV=1	[more]

BLAST of Clc07G01630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29035.1	7.2e-18	45.98	Plant self-incompatibility protein S1 family	[more]
AT4G16295.1	1.3e-16	43.68	S-protein homologue 1	[more]
AT4G16195.1	6.7e-08	31.25	Plant self-incompatibility protein S1 family	[more]
AT3G26880.1	2.0e-07	32.95	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	7.4e-07	31.48	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 35..109 e-value: 1.5E-19 score: 70.5
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 23..120
None	No IPR available	PANTHER	PTHR31232:SF34	PUTATIVE-RELATED	coord: 23..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G01630.1	Clc07G01630.1	mRNA