Clc07G01360 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G01360
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Auxin-responsive protein
Location	ClcChr07: 1389993 .. 1395477 (+)
RNA-Seq Expression	Clc07G01360
Synteny	Clc07G01360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATAAGAAAATAGAAATTAAGAAAAGAAAAGGAAAAGAAACAGAGAAGGGATTATGGAAGAAGGAACAGTAAGGAAGAAGACAATGATGGAGATGGAGGCGCATAACCCAGACAGGTGGGTCCAATTCCTTCATAAATTCAATCAATGCCGTTGCTTCCATTTCCAATCTCCATCTTCTTCCCCACGCCACCACCATTAAAACCCACTCTTTCTCTTTCCTCTTCTTCCTCTTCTTCCTCTTCTTCTTCTTCTTTCATTCATTTCCATTCCAATTCCTTCCTTTCTAATCATCCCAACCACCCCCTCCTTAAATCCCTTCTCAATCTTCCTTCAATTTGATGCGTTTTCAAGGACGATCACCACAAGTTTCTCATCATTCTATGTCGACTATTTCCAAAGATGATAACATGGTTTTGTCCTCTGAGGACTCTTCTTGCCCAGATGAAGCTGAAATCGAATTGGGGTTAGGGCTTTGCCTCGGTGTTCGCGACTCCGCACGCAAGATTCACAAAATTCCAAGCGGGGTTCAATTTGGTAGAATTTTAACGGCTGAGGATTTTCCTTCCTCGATCTCTTCTCATTCGTCTATGTCTTCTTCTTCATCTACCTCGTCTGTATGTTCCTCGTCTTCGCTTCGTGGAGTCAATGTCACTGATGGGTCGAAGAGAAATTCTGATTCTGCTGCAACTATCAATGGCGGGAGGTACTTACCCATTACTAATTCTTGCCCATCAGAGGAACTTACTCTATAATTGATTCCACTTTTTTCTCCTGTTTCCAATTTTGTGTGAAGCATACGAGTTTAGTTTCTTTGATTGATTCCTACCAATTATAGATTTGTCTAGTAATGTTAATTGTTATTGTGATTCTATTATTACAGTTTACTCCTCTAGCTATAAAGTTGCATGTGCTTCTCTGGTTTTGCTTTTTGAGTACAATATTGATTCGAATTTCTGGATATTTATCTTGATGAATCTGATACTGACAGATAGGTTTGCTGTTGCTTCCTTTTATTGTTTCTTTGGTTCCCTCTTCCTCATCCCAAAAGGAAACAGTAAGCTGAATATAGAAAGGGAATCATTTTGAATTTCTTCAGATTGTGCTCTACCGTACTTCATCTAATTAAATATGATACGGCTCTGCAAAAATTGAAAACTGGCCTTTGCTAGACTTCAAAGGACAAGATGCCCTGATATGATTTGACTGCACTCCCCTCTAAATTTCTTCTTTTTTCTATTAATACCATGGCATGGGAATTTATATAATGAAAGTGAAACTTCAAGAAAACATTCTTTGTACACCATATATAATAACACACGGATTGGTTTGAGCTAGTAAAAGAGATGCATCGAGAAAAAAGTGGGACTTTTTGGTATAACACCTAGAGAAACAGAAAAGATGTATAAAGAAAAGAATGTTCAACTCCCAATCTAACTTAAGGGCCTCGAAGACTTTTCAAATTAAAGAAAAGAATATTCTCCCTTTCGTACCTTTTCCTTTTGTTTCTGTTTTTGTGCTTTTACAGGTTGATTAGAGTTATAGCGGAGTCTTGCCAACATAATCATAGTTTACTGTATCACTACATCATTTACCAATCATGCAGGCAATATTGATCGTTACGTATTAGCATAAATAAAGAAAAAGAAGGAAAAGGGAAAGGAATGGAAAGAATGAAAAATTCTCGAAGGTGCATTAGCTTAAATTGGGAGTTGATTTTGGTTTCGTTGTATGTCATTCTTGTTTCTCTAAGGGTTGATGCTGTGGAGTTCGTGGAAACATTGAAACATGAAAATCTGGTTCCTTTTTCTCAATATATCTTTTTCTTTTTATTAGATCAATCCAATCCTAGCTTACTGACGTGTCTGGTAAAGGAAAATGACTGGGAGGTTCCAAGCTCCTTTTCTAGTCCTAGAGTCTAATTCTCAAGTTAGGTTGTAGCAAATATGCTTGATTTGGTGTTCTTTTCTAGATCAACTTCTAGTCTTATTGCCTAACTTTCATTGCGTAGAAGTTTATGATAGAATCCAAATATATTGAAGATAATCGATGATGGAATTATAGGATAAGCCAAGTTTTCAAGGTACTTGGACCTTCCCAATCTTGAGAAGACTCTCAAGTCCTAAATCCTTCACCAAAATATTGTCTATCCTCCTCATTTCCCTCCCCTCTATTTATAACCACCAAGTATAACAAACTCCCTTGCTAATTACTAATATACCCTTAATACTCTAGTAACACCCTAGTACCATTCCTATCAGTTTAATAAAGGTTTGTCTTTCCACCCTCAGAAATCCTAAAATTTGTAGAATGACAAATATAAAACCAATATTTAATTATTTAGGGGCTACTGACGTGATGTGCTAAATCTTTTGCATTACTTCCTGAAACAAAAATTGGACGATAACATATTTGGACTATTCGTTTCTTAATTTATCTTTATGATCATTTGCCTTTTAGAATATCTGAAGTTATTTTTAGATTATGAATGTGATTTTAAGCACACCATAATCTTTACTTTTGCACTAGTTATTAAAAACAGTTTCAAATACAGAAACAGAAATCTATCTTTGGAAACATCTACAGAACAAATCCCTACCTATTACTTCAGAATTCCATACAGATAGATTTTTATGCACTTTGCGTAATTGTATCGTTAAAGTATTAATAGTTGCAGTATGTGAAACATTCTTTGAGTACGCTTTGGCAAGCTACTTGAATTTCTTGCTTCTCAATCTTAACGGAATAGTGGAGTAACAAATTAGTAATGGTGGCCTATTATTCTTCTTATCCTGAAAGTTGAGTAGTTCCCAAGTCACTTAACCAATGAATTGTCTTGTCGTTTGTAGAATACTAGTCTTTGGAGTTGAGTGAGGTAGATTTTACCTTTTTGTATTAGTAAATGAATTCTCTTCTAGTTTTTGAGTTAAATGATGTATCATGTGGATTGCTGGGCTTAACGAATCAATGAAACATCAAGAAATACACTCTAGGGCTTACTTTTATCATTTGGAGGAGAAAAGAATCTGGGAATGAACCTGTTTTAAGTTTGAGTGACATGTAGACTAAAACAGTTTATGAAGGTTTTTGCCACTCCCTAATATAAGTTCACTTGTTCGAGCCAACTGACAACTAGTTTCCTAGACATTTAATATTCTATATAGTTGGCTAAGATTTGAACCTATGCAGCATCATAATTTACAGCTTATTGTTTGGCCTGGGCAAAGGTGGTTACAGTTTTGTAACGTTTGTTTCATTAGTCGTTGGAAAAGATAAATCTCAAAATTACTCATATGTAAAATTTGAGCATCAGGTAATGTGTAGAATTGCACATTTCAAATGCATCAATCTTTTTCTTTCAGGTAACTTTAAATGTCACAGTGGTCACCTATATGTTGAAGATGCTTGCAAAAAAAAGGAGAAGCTTTAATAATGTTAGAATAAATGTAACTTTGATTTTGGCGAGTATAGGGTTCTTTGCAGTGGATTATATCGTAATATTTTGATTTGCTTTCAGAAGTAGCCAGGTCGTGGGTTGGCCCCCAATCAGAGCTTCTAGGATCAGTACCTTGGTTAACCAGGCAAAACCTCACTCTATAGAAGAATTCAAGGTAGATGCTGGGAAGAATAAAAACAAGCATCAGGAGGCAGGGGCACTTAAGGGTGTTAGTGGTAAAAACCAACCAAATGAAGAGAGTAGGAATTCCAGAAATTCCGTGTACGTGAGGGTGAATATGGATGGAGTTCTCATTGGACGAAAGGTTAACCTCAGTGCTCACAGTAGCTACGAAACCTTGGCCCAAACAATTGAGAACATGTTCCTTGATCCCACTGCTCTGGTTGACTCATCTGGTAATTCCTTTCTCATCTGGTATAGTAGTGAATTTTGTGTTTTCCTAAAATGGGATATTTGCAACTGAATGAGAAGTGAATATACTCTAGAGTTCAATTTAATATTGTATTAACGCTATCTTTTGCCTGAATGGAATTAAGTTTTGTGATTGGTACTTAAAGATCTGTAGGGTTACTTTAAAGCTGCCTATCAGAAGGTTAATGTAAAGATGAAAGTGCTAATGTTGGGAATTTCTTGCTTGGGGTGGGCCCAACCATTTTCTTTATAGAGTGTGGAGAGATTCTTCTTATAATCTTTAGTGAAGCAACAAATTTTAAATCTTTTACGAAGGACCACCTCATACATTTTGTTGATATTTTATCATGAAACTTGTGTTGGTTCTAGAACCAAGGCATAAAGGTAGATATTTTCTGTTTGGTAACTGATAATGATGCTTTGTCGTCTGACACAGGATCAAGCATAAAGGAACGCAACGTAGTGAGACCCTCCAGACTACTAAACGGACTTTCTGGGTACATGCTTACTTATGAAGACAGGGAAGGAGATTGGATGCTAGTTGGCGATGTTCCTTGGGGGTATGCATCTTTTCACTCCAGTTGGTCTAATTGAAAATTTTCTATCAAAGCAATGAAATATAAAATTTCTAAAATGTCCCATTTTTTTCTGCTCGAGGTCTAAGGCCTCCAAGTTGGACTTTGTAAACTTTTAACCTAATATGTTAAAGGGGTGTTTGGGGTGCTGAGTTGAGTTGAGTTATGAAGTCTAGAGTTAATATGTTTGAGTTAGGAAATCTGTGTTTGGGGTGAAGAGTTGTAGAATGGAGTTCCTCAATAAATGTGCAAAATAGAGAAAGAGAGTGAGATGGAGTTCCTTGATAAATGTACAAAGTAAACTCACACATTTGAAGGTGAGTTATTTAACACCAACTTATGAAGTTGGTGGACCGTACACCCCCGGTCGTAATCTCACACAATCTTCTGAGCTAGAAACCTTCAATATATAACATTTTTGCATTGTTTTAAGAGGGGTGTTCCTATTTGTTTTGATCTTCTTTTCTTTCTTGTTTCGTTTGGTGTGCCTTCTTTCCACCACCCGAACTATCGCTTGAGTCTCAAATGATGAAAAATCCAAAGCCAGCTCCTTGGACAGTCAATCTTTTTTTTGAACATCCATCTTTAAATAGTTAAATTAGTGATCTTCTCTCGAGTCTCTATCTTTCTTTTCGAGTGGACTCTATCATCATGGACATCTTTTTATTTTGTTTTATTTCTCTTACTGGTATAGAAATTTTGATTCTTCTGATCATACATCCAGAATGTTTACCTACACGGTGAAGAGGCTTAGGATAATGAGAGCAACTGAAGCCAATCAAATTGGCAGATGATCGATCTGCCAGCAGGATTGAAACTCATGAACCGAAGACGTTTTTTCTTTCATTTTTATTTTCTTCTGCACGACACCTATTCTCTGTGGGGAGTTTGCAGCTCTGTAGCAGCAAGAGAAGGGATTGTTGGTATCATATGAGGAAGGCCAATATGTATGGGACTGAGGCAAAGCTTGAAAAACTGTGCAAATGAGAGGTAATAGGCGAAGCATTTTGAAAGCAAAAGGATTGCCTTTTTCTTCTTTTCTTT

mRNA sequence

AATAAGAAAATAGAAATTAAGAAAAGAAAAGGAAAAGAAACAGAGAAGGGATTATGGAAGAAGGAACAGTAAGGAAGAAGACAATGATGGAGATGGAGGCGCATAACCCAGACAGGTGGGTCCAATTCCTTCATAAATTCAATCAATGCCGTTGCTTCCATTTCCAATCTCCATCTTCTTCCCCACGCCACCACCATTAAAACCCACTCTTTCTCTTTCCTCTTCTTCCTCTTCTTCCTCTTCTTCTTCTTCTTTCATTCATTTCCATTCCAATTCCTTCCTTTCTAATCATCCCAACCACCCCCTCCTTAAATCCCTTCTCAATCTTCCTTCAATTTGATGCGTTTTCAAGGACGATCACCACAAGTTTCTCATCATTCTATGTCGACTATTTCCAAAGATGATAACATGGTTTTGTCCTCTGAGGACTCTTCTTGCCCAGATGAAGCTGAAATCGAATTGGGGTTAGGGCTTTGCCTCGGTGTTCGCGACTCCGCACGCAAGATTCACAAAATTCCAAGCGGGGTTCAATTTGGTAGAATTTTAACGGCTGAGGATTTTCCTTCCTCGATCTCTTCTCATTCGTCTATGTCTTCTTCTTCATCTACCTCGTCTGTATGTTCCTCGTCTTCGCTTCGTGGAGTCAATGTCACTGATGGGTCGAAGAGAAATTCTGATTCTGCTGCAACTATCAATGGCGGGAGAAGTAGCCAGGTCGTGGGTTGGCCCCCAATCAGAGCTTCTAGGATCAGTACCTTGGTTAACCAGGCAAAACCTCACTCTATAGAAGAATTCAAGGTAGATGCTGGGAAGAATAAAAACAAGCATCAGGAGGCAGGGGCACTTAAGGGTGTTAGTGGTAAAAACCAACCAAATGAAGAGAGTAGGAATTCCAGAAATTCCGTGTACGTGAGGGTGAATATGGATGGAGTTCTCATTGGACGAAAGGTTAACCTCAGTGCTCACAGTAGCTACGAAACCTTGGCCCAAACAATTGAGAACATGTTCCTTGATCCCACTGCTCTGGTTGACTCATCTGGCATAAAGGTAGATATTTTCTGTTTGGTAACTGATAATGATGCTTTGTCGTCTGACACAGGATCAAGCATAAAGGAACGCAACGTAGTGAGACCCTCCAGACTACTAAACGGACTTTCTGGGTACATGCTTACTTATGAAGACAGGGAAGGAGATTGGATGCTAGTTGGCGATGTTCCTTGGGGAATGTTTACCTACACGGTGAAGAGGCTTAGGATAATGAGAGCAACTGAAGCCAATCAAATTGGCAGATGATCGATCTGCCAGCAGGATTGAAACTCATGAACCGAAGACGTTTTTTCTTTCATTTTTATTTTCTTCTGCACGACACCTATTCTCTGTGGGGAGTTTGCAGCTCTGTAGCAGCAAGAGAAGGGATTGTTGGTATCATATGAGGAAGGCCAATATGTATGGGACTGAGGCAAAGCTTGAAAAACTGTGCAAATGAGAGGTAATAGGCGAAGCATTTTGAAAGCAAAAGGATTGCCTTTTTCTTCTTTTCTTT

Coding sequence (CDS)

ATGCGTTTTCAAGGACGATCACCACAAGTTTCTCATCATTCTATGTCGACTATTTCCAAAGATGATAACATGGTTTTGTCCTCTGAGGACTCTTCTTGCCCAGATGAAGCTGAAATCGAATTGGGGTTAGGGCTTTGCCTCGGTGTTCGCGACTCCGCACGCAAGATTCACAAAATTCCAAGCGGGGTTCAATTTGGTAGAATTTTAACGGCTGAGGATTTTCCTTCCTCGATCTCTTCTCATTCGTCTATGTCTTCTTCTTCATCTACCTCGTCTGTATGTTCCTCGTCTTCGCTTCGTGGAGTCAATGTCACTGATGGGTCGAAGAGAAATTCTGATTCTGCTGCAACTATCAATGGCGGGAGAAGTAGCCAGGTCGTGGGTTGGCCCCCAATCAGAGCTTCTAGGATCAGTACCTTGGTTAACCAGGCAAAACCTCACTCTATAGAAGAATTCAAGGTAGATGCTGGGAAGAATAAAAACAAGCATCAGGAGGCAGGGGCACTTAAGGGTGTTAGTGGTAAAAACCAACCAAATGAAGAGAGTAGGAATTCCAGAAATTCCGTGTACGTGAGGGTGAATATGGATGGAGTTCTCATTGGACGAAAGGTTAACCTCAGTGCTCACAGTAGCTACGAAACCTTGGCCCAAACAATTGAGAACATGTTCCTTGATCCCACTGCTCTGGTTGACTCATCTGGCATAAAGGTAGATATTTTCTGTTTGGTAACTGATAATGATGCTTTGTCGTCTGACACAGGATCAAGCATAAAGGAACGCAACGTAGTGAGACCCTCCAGACTACTAAACGGACTTTCTGGGTACATGCTTACTTATGAAGACAGGGAAGGAGATTGGATGCTAGTTGGCGATGTTCCTTGGGGAATGTTTACCTACACGGTGAAGAGGCTTAGGATAATGAGAGCAACTGAAGCCAATCAAATTGGCAGATGA

Protein sequence

MRFQGRSPQVSHHSMSTISKDDNMVLSSEDSSCPDEAEIELGLGLCLGVRDSARKIHKIPSGVQFGRILTAEDFPSSISSHSSMSSSSSTSSVCSSSSLRGVNVTDGSKRNSDSAATINGGRSSQVVGWPPIRASRISTLVNQAKPHSIEEFKVDAGKNKNKHQEAGALKGVSGKNQPNEESRNSRNSVYVRVNMDGVLIGRKVNLSAHSSYETLAQTIENMFLDPTALVDSSGIKVDIFCLVTDNDALSSDTGSSIKERNVVRPSRLLNGLSGYMLTYEDREGDWMLVGDVPWGMFTYTVKRLRIMRATEANQIGR

Homology

[Close]

BLAST of Clc07G01360 vs. NCBI nr
Match: XP_038888843.1 (auxin-responsive protein IAA11-like [Benincasa hispida])

HSP 1 Score: 491.5 bits (1264), Expect = 5.4e-135
Identity = 265/304 (87.17%), Postives = 274/304 (90.13%), Query Frame = 0


Query: 15  MSTISKDDNMVLSSEDSSCPDEAEIELGLGLCLGVRDSA-RKIHKIPSGVQFGRILTAED 74
           MSTISKDDNMVLSSEDSSCPDE+EIELGLGLCLGVRDSA RKI K+  GVQFGRILTAED
Sbjct: 1   MSTISKDDNMVLSSEDSSCPDESEIELGLGLCLGVRDSATRKIQKVSIGVQFGRILTAED 60

Query: 75  FPSSISSHSSMSSSSSTSSVCSSSSLRGVNVTDGSKRNSDSAATINGGRSSQVVGWPPIR 134
           FPSSISSHSSMSSSS+TSSVCSSSSLRGVNVTDGSKRNSDSA TINGGR+SQVVGWPPIR
Sbjct: 61  FPSSISSHSSMSSSSTTSSVCSSSSLRGVNVTDGSKRNSDSAPTINGGRTSQVVGWPPIR 120

Query: 135 ASRISTLVNQAKPHSIEEFKVDAGKNKNKHQEAGALKGVSGKNQPNEESRNSRNSVYVRV 194
           ASRISTLVNQAKPHS+EEFKVDAGKNK KHQEAGAL GVSGKNQ NEESRNSRNSVYV+V
Sbjct: 121 ASRISTLVNQAKPHSVEEFKVDAGKNKTKHQEAGALTGVSGKNQANEESRNSRNSVYVKV 180

Query: 195 NMDGVLIGRKVNLSAHSSYETLAQTIENMFLDPTALVDSSGIKVDIFCLVTDNDALSSDT 254
           NMDGVLIGRKVNLSAHSSYETLA+TIENMFLDPTALVDS                    T
Sbjct: 181 NMDGVLIGRKVNLSAHSSYETLAKTIENMFLDPTALVDS--------------------T 240

Query: 255 GSSIKERNVVRPSRLLNGLSGYMLTYEDREGDWMLVGDVPWGMFTYTVKRLRIMRATEAN 314
           GSS KER+VVRPSRLLNGLS YMLTYEDREGDWMLVGDVPWGMFTY+VKRLRIMRATEAN
Sbjct: 241 GSSTKERDVVRPSRLLNGLSEYMLTYEDREGDWMLVGDVPWGMFTYSVKRLRIMRATEAN 284

Query: 315 QIGR 318
           QIGR
Sbjct: 301 QIGR 284

[Close]

BLAST of Clc07G01360 vs. NCBI nr
Match: XP_008447370.1 (PREDICTED: auxin-responsive protein IAA11 isoform X1 [Cucumis melo])

HSP 1 Score: 451.8 bits (1161), Expect = 4.8e-123
Identity = 250/310 (80.65%), Postives = 264/310 (85.16%), Query Frame = 0


Query: 10  VSHHSMSTISKDDNMVLSSEDSSCPDEAEIELGLGLCLGVRDSARKIHKIPS-GVQFGRI 69
           +S HSMSTISKDDNMVLSSEDSS PDE+EIELGLGLCLGVRDS R IHK  S G+QF RI
Sbjct: 2   LSQHSMSTISKDDNMVLSSEDSSSPDESEIELGLGLCLGVRDSPRNIHKTSSGGIQFRRI 61

Query: 70  LTAEDFPSSISSHSSMSSSSSTSSVCSSSSLRGVNVTDGSKRNSDSAATINGGRSSQVVG 129
           LTAEDFPSSIS     SSSSSTSSVCSSSSLRGVNVTDGS  NSDS+ T NGGRSSQVVG
Sbjct: 62  LTAEDFPSSIS-----SSSSSTSSVCSSSSLRGVNVTDGSNTNSDSSPTTNGGRSSQVVG 121

Query: 130 WPPIRASRISTLVNQAKPHSIEEFKVDAGKNKNKHQEAGALKG-VSGKNQPNEESRNSRN 189
           WPPIRASRISTLVNQAKPHS+EEFKVDAGK+KNKHQ+ GALK  +SGK+Q  EESRNSRN
Sbjct: 122 WPPIRASRISTLVNQAKPHSVEEFKVDAGKDKNKHQKEGALKSIISGKDQSKEESRNSRN 181

Query: 190 SVYVRVNMDGVLIGRKVNLSAHSSYETLAQTIENMFLDPTALVDSSGIKVDIFCLVTDND 249
           SVYV+VNMDGVLIGRKVNLSAHSSYETLAQTIENMFLDPTALV+S               
Sbjct: 182 SVYVKVNMDGVLIGRKVNLSAHSSYETLAQTIENMFLDPTALVNS--------------- 241

Query: 250 ALSSDTGSSIKERNVVRPSRLLNGLSGYMLTYEDREGDWMLVGDVPWGMFTYTVKRLRIM 309
                TGSSIKE + VRPSRLLNG SGYMLTYEDREGDWMLVGDVPWGMFT++VKRLRIM
Sbjct: 242 -----TGSSIKEHDGVRPSRLLNGHSGYMLTYEDREGDWMLVGDVPWGMFTHSVKRLRIM 286

Query: 310 RATEANQIGR 318
           RATE NQIGR
Sbjct: 302 RATELNQIGR 286

[Close]

BLAST of Clc07G01360 vs. NCBI nr
Match: XP_008447371.1 (PREDICTED: auxin-responsive protein IAA11 isoform X2 [Cucumis melo])

HSP 1 Score: 445.3 bits (1144), Expect = 4.5e-121
Identity = 249/310 (80.32%), Postives = 263/310 (84.84%), Query Frame = 0


Query: 10  VSHHSMSTISKDDNMVLSSEDSSCPDEAEIELGLGLCLGVRDSARKIHKIPS-GVQFGRI 69
           +S HSMSTISKDDNMVLSSEDSS PDE+EIELGLGLCLGVRDS R IHK  S G+QF RI
Sbjct: 2   LSQHSMSTISKDDNMVLSSEDSSSPDESEIELGLGLCLGVRDSPRNIHKTSSGGIQFRRI 61

Query: 70  LTAEDFPSSISSHSSMSSSSSTSSVCSSSSLRGVNVTDGSKRNSDSAATINGGRSSQVVG 129
           LTAEDFPSSIS     SSSSSTSSVCSSSSLRGVNVTDGS  NSDS+ T NGG SSQVVG
Sbjct: 62  LTAEDFPSSIS-----SSSSSTSSVCSSSSLRGVNVTDGSNTNSDSSPTTNGG-SSQVVG 121

Query: 130 WPPIRASRISTLVNQAKPHSIEEFKVDAGKNKNKHQEAGALKG-VSGKNQPNEESRNSRN 189
           WPPIRASRISTLVNQAKPHS+EEFKVDAGK+KNKHQ+ GALK  +SGK+Q  EESRNSRN
Sbjct: 122 WPPIRASRISTLVNQAKPHSVEEFKVDAGKDKNKHQKEGALKSIISGKDQSKEESRNSRN 181

Query: 190 SVYVRVNMDGVLIGRKVNLSAHSSYETLAQTIENMFLDPTALVDSSGIKVDIFCLVTDND 249
           SVYV+VNMDGVLIGRKVNLSAHSSYETLAQTIENMFLDPTALV+S               
Sbjct: 182 SVYVKVNMDGVLIGRKVNLSAHSSYETLAQTIENMFLDPTALVNS--------------- 241

Query: 250 ALSSDTGSSIKERNVVRPSRLLNGLSGYMLTYEDREGDWMLVGDVPWGMFTYTVKRLRIM 309
                TGSSIKE + VRPSRLLNG SGYMLTYEDREGDWMLVGDVPWGMFT++VKRLRIM
Sbjct: 242 -----TGSSIKEHDGVRPSRLLNGHSGYMLTYEDREGDWMLVGDVPWGMFTHSVKRLRIM 285

Query: 310 RATEANQIGR 318
           RATE NQIGR
Sbjct: 302 RATELNQIGR 285

[Close]

BLAST of Clc07G01360 vs. NCBI nr
Match: XP_004152002.2 (auxin-responsive protein IAA11 isoform X1 [Cucumis sativus] >KAE8650830.1 hypothetical protein Csa_017421 [Cucumis sativus])

HSP 1 Score: 443.0 bits (1138), Expect = 2.2e-120
Identity = 243/310 (78.39%), Postives = 261/310 (84.19%), Query Frame = 0


Query: 10  VSHHSMSTISKDDNMVLSSEDSSCPDEAEIELGLGLCLGVRDSARKIHKIP-SGVQFGRI 69
           +S HSMSTISKDDNMVLSSEDSS PD++EIELGLGLCLG+RDS   IHK P  G+QF RI
Sbjct: 2   LSQHSMSTISKDDNMVLSSEDSSSPDDSEIELGLGLCLGLRDSPPNIHKTPIGGIQFRRI 61

Query: 70  LTAEDFPSSISSHSSMSSSSSTSSVCSSSSLRGVNVTDGSKRNSDSAATINGGRSSQVVG 129
           LTAEDFPSSI   SS SSSSSTSSVCSSSSLRGVN+TD S  NSDSA T+NGGRSSQVVG
Sbjct: 62  LTAEDFPSSI---SSSSSSSSTSSVCSSSSLRGVNLTDASNTNSDSAPTVNGGRSSQVVG 121

Query: 130 WPPIRASRISTLVNQAKPHSIEEFKVDAGKNKNKHQEAGALKG-VSGKNQPNEESRNSRN 189
           WPPIRASRISTLVNQAKPHS+EEFKVD GK+KNKHQ+ G LKG +SGK+Q  EESRN RN
Sbjct: 122 WPPIRASRISTLVNQAKPHSVEEFKVDTGKDKNKHQKIGVLKGIISGKDQAKEESRNFRN 181

Query: 190 SVYVRVNMDGVLIGRKVNLSAHSSYETLAQTIENMFLDPTALVDSSGIKVDIFCLVTDND 249
           SVYV+VNMDGVLIGRKVNLSAHSSYETLA T+ENMFLDPTALV+S               
Sbjct: 182 SVYVKVNMDGVLIGRKVNLSAHSSYETLALTVENMFLDPTALVNS--------------- 241

Query: 250 ALSSDTGSSIKERNVVRPSRLLNGLSGYMLTYEDREGDWMLVGDVPWGMFTYTVKRLRIM 309
                TGSSIKE + VRPSRLLNG SGYMLTYEDREGDWMLVGDVPWGMFT++VKRLRIM
Sbjct: 242 -----TGSSIKEHDGVRPSRLLNGHSGYMLTYEDREGDWMLVGDVPWGMFTHSVKRLRIM 288

Query: 310 RATEANQIGR 318
           RATE NQIGR
Sbjct: 302 RATELNQIGR 288

[Close]

BLAST of Clc07G01360 vs. NCBI nr
Match: XP_031737490.1 (auxin-responsive protein IAA11 isoform X2 [Cucumis sativus])

HSP 1 Score: 436.4 bits (1121), Expect = 2.1e-118
Identity = 242/310 (78.06%), Postives = 260/310 (83.87%), Query Frame = 0


Query: 10  VSHHSMSTISKDDNMVLSSEDSSCPDEAEIELGLGLCLGVRDSARKIHKIP-SGVQFGRI 69
           +S HSMSTISKDDNMVLSSEDSS PD++EIELGLGLCLG+RDS   IHK P  G+QF RI
Sbjct: 2   LSQHSMSTISKDDNMVLSSEDSSSPDDSEIELGLGLCLGLRDSPPNIHKTPIGGIQFRRI 61

Query: 70  LTAEDFPSSISSHSSMSSSSSTSSVCSSSSLRGVNVTDGSKRNSDSAATINGGRSSQVVG 129
           LTAEDFPSSI   SS SSSSSTSSVCSSSSLRGVN+TD S  NSDSA T+NGG SSQVVG
Sbjct: 62  LTAEDFPSSI---SSSSSSSSTSSVCSSSSLRGVNLTDASNTNSDSAPTVNGG-SSQVVG 121

Query: 130 WPPIRASRISTLVNQAKPHSIEEFKVDAGKNKNKHQEAGALKG-VSGKNQPNEESRNSRN 189
           WPPIRASRISTLVNQAKPHS+EEFKVD GK+KNKHQ+ G LKG +SGK+Q  EESRN RN
Sbjct: 122 WPPIRASRISTLVNQAKPHSVEEFKVDTGKDKNKHQKIGVLKGIISGKDQAKEESRNFRN 181

Query: 190 SVYVRVNMDGVLIGRKVNLSAHSSYETLAQTIENMFLDPTALVDSSGIKVDIFCLVTDND 249
           SVYV+VNMDGVLIGRKVNLSAHSSYETLA T+ENMFLDPTALV+S               
Sbjct: 182 SVYVKVNMDGVLIGRKVNLSAHSSYETLALTVENMFLDPTALVNS--------------- 241

Query: 250 ALSSDTGSSIKERNVVRPSRLLNGLSGYMLTYEDREGDWMLVGDVPWGMFTYTVKRLRIM 309
                TGSSIKE + VRPSRLLNG SGYMLTYEDREGDWMLVGDVPWGMFT++VKRLRIM
Sbjct: 242 -----TGSSIKEHDGVRPSRLLNGHSGYMLTYEDREGDWMLVGDVPWGMFTHSVKRLRIM 287

Query: 310 RATEANQIGR 318
           RATE NQIGR
Sbjct: 302 RATELNQIGR 287

[Close]

BLAST of Clc07G01360 vs. ExPASy Swiss-Prot
Match: Q38829 (Auxin-responsive protein IAA11 OS=Arabidopsis thaliana OX=3702 GN=IAA11 PE=1 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.1e-40
Identity = 122/300 (40.67%), Postives = 168/300 (56.00%), Query Frame = 0


Query: 14  SMSTISKDDNMVLSSEDSSCPDEAEIELGLGLCLGVRDSARKIHKIPSGVQFGRILTAED 73
           S S +S D+N+V+S EDSS P   E+ELGL L LG     RK      G +  R+     
Sbjct: 9   SASALSNDENLVVSCEDSSSPIGNELELGLTLSLG-----RK------GYRDCRV----- 68

Query: 74  FPSSISSHSSMSSSSSTSSVCSSSSLRGVNVTDGSKRNSDSAATINGGRSSQVVGWPPIR 133
                  ++  SSSSS     SSSSL   +V  G KR +DS A  +G    QVVGWPPIR
Sbjct: 69  -------YADDSSSSS-----SSSSLSRASVIAGIKRTADSMAATSG----QVVGWPPIR 128

Query: 134 ASRISTLVNQAKPHSIEEFKVDAGKNKNKHQEAGALKGVSGKNQPNEESRNSRNSVYVRV 193
             R++++VNQAK  + E+  ++  +  NK++                +S   RNS++V+V
Sbjct: 129 TYRMNSMVNQAKASATEDPNLEISQAVNKNR---------------SDSTKMRNSMFVKV 188

Query: 194 NMDGVLIGRKVNLSAHSSYETLAQTIENMFLDPTALVDSSGIKVDIFCLVTDNDALSSDT 253
            MDG+ IGRK++L+AH  YE+L+ T+E MFL P         K+    L TD        
Sbjct: 189 TMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKP---------KLGSRTLETDG------- 238

Query: 254 GSSIKERNVVRPSRLL-NGLSGYMLTYEDREGDWMLVGDVPWGMFTYTVKRLRIMRATEA 313
                  ++  P ++L +G SG +LTYED+EGDWMLVGDVPWGMF  +V+RLRIM+ +EA
Sbjct: 249 -------HMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEA 238

[Close]

BLAST of Clc07G01360 vs. ExPASy Swiss-Prot
Match: Q38831 (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=2)

HSP 1 Score: 165.6 bits (418), Expect = 9.0e-40
Identity = 118/285 (41.40%), Postives = 152/285 (53.33%), Query Frame = 0


Query: 36  EAEIELGLGLCLGVRDSARKIHKIPSGVQF---GRILTAEDFPSSISSHSSMSSSSSTSS 95
           E+E+ELGLGL LG   +A KI K   G  +   GR+LTA+DFPS                
Sbjct: 11  ESELELGLGLSLG-GGTAAKIGKSGGGGAWGERGRLLTAKDFPSV--------------- 70

Query: 96  VCSSSSLRGVNVTDGSKRNSDSAATINGG---RSSQVVGWPPIRASRISTLVNQAKPHSI 155
                         GSKR +DSA+         SSQVVGWPPI + R+++LVN     S 
Sbjct: 71  --------------GSKRAADSASHAGSSPPRSSSQVVGWPPIGSHRMNSLVNNQATKSA 130

Query: 156 EEFKVDAGKNKNKHQE-AGALKGVSGKNQPNEESRNSRNSVYVRVNMDGVLIGRKVNLSA 215
            E + +AGK K K  E     K V+GK Q            +++VNMDGV IGRKV+L+A
Sbjct: 131 RE-EEEAGKKKVKDDEPKDVTKKVNGKVQVG----------FIKVNMDGVAIGRKVDLNA 190

Query: 216 HSSYETLAQTIENMFLDPTALVDSSGIKVDIFCLVTDNDALSSDTGSSIKERNVVRPSRL 275
           HSSYE LAQT+E+MF                           ++ G+        +P RL
Sbjct: 191 HSSYENLAQTLEDMF-------------------------FRTNPGTVGLTSQFTKPLRL 229

Query: 276 LNGLSGYMLTYEDREGDWMLVGDVPWGMFTYTVKRLRIMRATEAN 314
           L+G S ++LTYED+EGDWMLVGDVPW MF  +VKRLR+M+ +EAN
Sbjct: 251 LDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEAN 229

[Close]

BLAST of Clc07G01360 vs. ExPASy Swiss-Prot
Match: Q38830 (Auxin-responsive protein IAA12 OS=Arabidopsis thaliana OX=3702 GN=IAA12 PE=1 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 5.4e-37
Identity = 116/283 (40.99%), Postives = 151/283 (53.36%), Query Frame = 0


Query: 31  SSCPDEAEIELGLGLCLGVRDSARKIHKIPSGVQFGRILTAEDFPSSISSHSSMSSSSST 90
           S+ P E+E+ELGLGL LG    A K        + GRILTA+DFPS  S  S+ SSS   
Sbjct: 12  SNLPAESELELGLGLSLG--GGAWK--------ERGRILTAKDFPSVGSKRSAESSSHQG 71

Query: 91  SSVCSSSSLRGVNVTDGSKRNSDSAATINGGRSSQVVGWPPIRASRISTLVNQAKPHSIE 150
           +S                             RSSQVVGWPPI   R+++LVN     +++
Sbjct: 72  AS---------------------------PPRSSQVVGWPPIGLHRMNSLVNN---QAMK 131

Query: 151 EFKVDAGKNKNKHQEAGALKGVSGKNQPNEESRNSRNSVYVRVNMDGVLIGRKVNLSAHS 210
             + + G  + K  +   LK VS K  P  +        +V+VNMDGV IGRKV++ AHS
Sbjct: 132 AARAEEGDGEKKVVKNDELKDVSMKVNPKVQGLG-----FVKVNMDGVGIGRKVDMRAHS 191

Query: 211 SYETLAQTIENMFLDPTALVDSSGIKVDIFCLVTDNDALSSDTGSSIKERNVVRPSRLLN 270
           SYE LAQT+E MF                             TG++ +E+  V+P RLL+
Sbjct: 192 SYENLAQTLEEMFF--------------------------GMTGTTCREK--VKPLRLLD 221

Query: 271 GLSGYMLTYEDREGDWMLVGDVPWGMFTYTVKRLRIMRATEAN 314
           G S ++LTYED+EGDWMLVGDVPW MF  +VKRLRIM  +EA+
Sbjct: 252 GSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEAS 221

[Close]

BLAST of Clc07G01360 vs. ExPASy Swiss-Prot
Match: A2XB18 (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica OX=39946 GN=IAA10 PE=2 SV=2)

HSP 1 Score: 138.3 bits (347), Expect = 1.5e-31
Identity = 109/290 (37.59%), Postives = 156/290 (53.79%), Query Frame = 0


Query: 29  EDSSCPDEAEIELGLGLCLGVRDSARKIHKIPSGVQFGRILTAEDF-PSSISSHSSMSSS 88
           E+SS  D+ E+ELGL   LG +   ++ H  P      RILTA D  P++  S  S  SS
Sbjct: 24  EESSAGDDEELELGLS--LGSKKQQQQQH-APC-----RILTARDLQPAAALSPDSSVSS 83

Query: 89  SSTSSVCSSSSLRGVNVTDGSKRNSDSAATINGGRSSQVVGWPPIRASRISTLVNQAKPH 148
           SS ++  ++   R    T  +  +  + A+ +   S  VVGWPPIR  R+++L NQAK +
Sbjct: 84  SSPAAAAAAGGKRAEGPT--ATTSPGTVASGHPHSSFGVVGWPPIRQFRMNSLFNQAKEN 143

Query: 149 SIEEFKVDAGKNKNKHQEAGALKGVSGKNQPNEESRNSRNSVYVRVNMDGVLIGRKVNLS 208
           + E        N++  Q+              E  +  R + +V+VNMDG +IGRKV+L+
Sbjct: 144 TSETDTKKTATNESDVQK-----------DKEEGEKKGRVAGWVKVNMDGEVIGRKVDLN 203

Query: 209 AHSSYETLAQTIENMFLDPTALVDSSGIKVDIFCLVTDNDALSSDTGSSIKERNVVRPSR 268
           AH SY+TLA  +E MF  P     S G+     C   + ++L                 +
Sbjct: 204 AHRSYKTLALALELMFTKP-----SIGL-----CASHNTNSL-----------------K 263

Query: 269 LLNGLSGYMLTYEDREGDWMLVGDVPWGMFTYTVKRLRIMRATEANQIGR 318
           LL+  + Y LTYEDR+GDWMLVGDVPW MF  +VKRLRIMR ++AN +G+
Sbjct: 264 LLDNSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQ 265

[Close]

BLAST of Clc07G01360 vs. ExPASy Swiss-Prot
Match: Q0DWF2 (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA10 PE=2 SV=2)

HSP 1 Score: 138.3 bits (347), Expect = 1.5e-31
Identity = 109/290 (37.59%), Postives = 156/290 (53.79%), Query Frame = 0


Query: 29  EDSSCPDEAEIELGLGLCLGVRDSARKIHKIPSGVQFGRILTAEDF-PSSISSHSSMSSS 88
           E+SS  D+ E+ELGL   LG +   ++ H  P      RILTA D  P++  S  S  SS
Sbjct: 24  EESSAGDDEELELGLS--LGSKKQQQQQH-APC-----RILTARDLQPAAALSPDSSVSS 83

Query: 89  SSTSSVCSSSSLRGVNVTDGSKRNSDSAATINGGRSSQVVGWPPIRASRISTLVNQAKPH 148
           SS ++  ++   R    T  +  +  + A+ +   S  VVGWPPIR  R+++L NQAK +
Sbjct: 84  SSPAAAAAAGGKRAEGPT--ATTSPGTVASGHPHSSFGVVGWPPIRQFRMNSLFNQAKEN 143

Query: 149 SIEEFKVDAGKNKNKHQEAGALKGVSGKNQPNEESRNSRNSVYVRVNMDGVLIGRKVNLS 208
           + E        N++  Q+              E  +  R + +V+VNMDG +IGRKV+L+
Sbjct: 144 TSETDTKKTATNESDVQK-----------DKEEGEKKGRVAGWVKVNMDGEVIGRKVDLN 203

Query: 209 AHSSYETLAQTIENMFLDPTALVDSSGIKVDIFCLVTDNDALSSDTGSSIKERNVVRPSR 268
           AH SY+TLA  +E MF  P     S G+     C   + ++L                 +
Sbjct: 204 AHRSYKTLALALELMFTKP-----SIGL-----CASHNTNSL-----------------K 263

Query: 269 LLNGLSGYMLTYEDREGDWMLVGDVPWGMFTYTVKRLRIMRATEANQIGR 318
           LL+  + Y LTYEDR+GDWMLVGDVPW MF  +VKRLRIMR ++AN +G+
Sbjct: 264 LLDNSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQ 265

[Close]

BLAST of Clc07G01360 vs. ExPASy TrEMBL
Match: A0A1S3BH91 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103489837 PE=3 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 2.3e-123
Identity = 250/310 (80.65%), Postives = 264/310 (85.16%), Query Frame = 0


Query: 10  VSHHSMSTISKDDNMVLSSEDSSCPDEAEIELGLGLCLGVRDSARKIHKIPS-GVQFGRI 69
           +S HSMSTISKDDNMVLSSEDSS PDE+EIELGLGLCLGVRDS R IHK  S G+QF RI
Sbjct: 2   LSQHSMSTISKDDNMVLSSEDSSSPDESEIELGLGLCLGVRDSPRNIHKTSSGGIQFRRI 61

Query: 70  LTAEDFPSSISSHSSMSSSSSTSSVCSSSSLRGVNVTDGSKRNSDSAATINGGRSSQVVG 129
           LTAEDFPSSIS     SSSSSTSSVCSSSSLRGVNVTDGS  NSDS+ T NGGRSSQVVG
Sbjct: 62  LTAEDFPSSIS-----SSSSSTSSVCSSSSLRGVNVTDGSNTNSDSSPTTNGGRSSQVVG 121

Query: 130 WPPIRASRISTLVNQAKPHSIEEFKVDAGKNKNKHQEAGALKG-VSGKNQPNEESRNSRN 189
           WPPIRASRISTLVNQAKPHS+EEFKVDAGK+KNKHQ+ GALK  +SGK+Q  EESRNSRN
Sbjct: 122 WPPIRASRISTLVNQAKPHSVEEFKVDAGKDKNKHQKEGALKSIISGKDQSKEESRNSRN 181

Query: 190 SVYVRVNMDGVLIGRKVNLSAHSSYETLAQTIENMFLDPTALVDSSGIKVDIFCLVTDND 249
           SVYV+VNMDGVLIGRKVNLSAHSSYETLAQTIENMFLDPTALV+S               
Sbjct: 182 SVYVKVNMDGVLIGRKVNLSAHSSYETLAQTIENMFLDPTALVNS--------------- 241

Query: 250 ALSSDTGSSIKERNVVRPSRLLNGLSGYMLTYEDREGDWMLVGDVPWGMFTYTVKRLRIM 309
                TGSSIKE + VRPSRLLNG SGYMLTYEDREGDWMLVGDVPWGMFT++VKRLRIM
Sbjct: 242 -----TGSSIKEHDGVRPSRLLNGHSGYMLTYEDREGDWMLVGDVPWGMFTHSVKRLRIM 286

Query: 310 RATEANQIGR 318
           RATE NQIGR
Sbjct: 302 RATELNQIGR 286

[Close]

BLAST of Clc07G01360 vs. ExPASy TrEMBL
Match: A0A1S3BHW4 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103489837 PE=3 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 2.2e-121
Identity = 249/310 (80.32%), Postives = 263/310 (84.84%), Query Frame = 0


Query: 10  VSHHSMSTISKDDNMVLSSEDSSCPDEAEIELGLGLCLGVRDSARKIHKIPS-GVQFGRI 69
           +S HSMSTISKDDNMVLSSEDSS PDE+EIELGLGLCLGVRDS R IHK  S G+QF RI
Sbjct: 2   LSQHSMSTISKDDNMVLSSEDSSSPDESEIELGLGLCLGVRDSPRNIHKTSSGGIQFRRI 61

Query: 70  LTAEDFPSSISSHSSMSSSSSTSSVCSSSSLRGVNVTDGSKRNSDSAATINGGRSSQVVG 129
           LTAEDFPSSIS     SSSSSTSSVCSSSSLRGVNVTDGS  NSDS+ T NGG SSQVVG
Sbjct: 62  LTAEDFPSSIS-----SSSSSTSSVCSSSSLRGVNVTDGSNTNSDSSPTTNGG-SSQVVG 121

Query: 130 WPPIRASRISTLVNQAKPHSIEEFKVDAGKNKNKHQEAGALKG-VSGKNQPNEESRNSRN 189
           WPPIRASRISTLVNQAKPHS+EEFKVDAGK+KNKHQ+ GALK  +SGK+Q  EESRNSRN
Sbjct: 122 WPPIRASRISTLVNQAKPHSVEEFKVDAGKDKNKHQKEGALKSIISGKDQSKEESRNSRN 181

Query: 190 SVYVRVNMDGVLIGRKVNLSAHSSYETLAQTIENMFLDPTALVDSSGIKVDIFCLVTDND 249
           SVYV+VNMDGVLIGRKVNLSAHSSYETLAQTIENMFLDPTALV+S               
Sbjct: 182 SVYVKVNMDGVLIGRKVNLSAHSSYETLAQTIENMFLDPTALVNS--------------- 241

Query: 250 ALSSDTGSSIKERNVVRPSRLLNGLSGYMLTYEDREGDWMLVGDVPWGMFTYTVKRLRIM 309
                TGSSIKE + VRPSRLLNG SGYMLTYEDREGDWMLVGDVPWGMFT++VKRLRIM
Sbjct: 242 -----TGSSIKEHDGVRPSRLLNGHSGYMLTYEDREGDWMLVGDVPWGMFTHSVKRLRIM 285

Query: 310 RATEANQIGR 318
           RATE NQIGR
Sbjct: 302 RATELNQIGR 285

[Close]

BLAST of Clc07G01360 vs. ExPASy TrEMBL
Match: A0A0A0LBH3 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_3G610800 PE=3 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 5.9e-119
Identity = 240/305 (78.69%), Postives = 257/305 (84.26%), Query Frame = 0


Query: 15  MSTISKDDNMVLSSEDSSCPDEAEIELGLGLCLGVRDSARKIHKIP-SGVQFGRILTAED 74
           MSTISKDDNMVLSSEDSS PD++EIELGLGLCLG+RDS   IHK P  G+QF RILTAED
Sbjct: 1   MSTISKDDNMVLSSEDSSSPDDSEIELGLGLCLGLRDSPPNIHKTPIGGIQFRRILTAED 60

Query: 75  FPSSISSHSSMSSSSSTSSVCSSSSLRGVNVTDGSKRNSDSAATINGGRSSQVVGWPPIR 134
           FPSSI   SS SSSSSTSSVCSSSSLRGVN+TD S  NSDSA T+NGGRSSQVVGWPPIR
Sbjct: 61  FPSSI---SSSSSSSSTSSVCSSSSLRGVNLTDASNTNSDSAPTVNGGRSSQVVGWPPIR 120

Query: 135 ASRISTLVNQAKPHSIEEFKVDAGKNKNKHQEAGALKG-VSGKNQPNEESRNSRNSVYVR 194
           ASRISTLVNQAKPHS+EEFKVD GK+KNKHQ+ G LKG +SGK+Q  EESRN RNSVYV+
Sbjct: 121 ASRISTLVNQAKPHSVEEFKVDTGKDKNKHQKIGVLKGIISGKDQAKEESRNFRNSVYVK 180

Query: 195 VNMDGVLIGRKVNLSAHSSYETLAQTIENMFLDPTALVDSSGIKVDIFCLVTDNDALSSD 254
           VNMDGVLIGRKVNLSAHSSYETLA T+ENMFLDPTALV+S                    
Sbjct: 181 VNMDGVLIGRKVNLSAHSSYETLALTVENMFLDPTALVNS-------------------- 240

Query: 255 TGSSIKERNVVRPSRLLNGLSGYMLTYEDREGDWMLVGDVPWGMFTYTVKRLRIMRATEA 314
           TGSSIKE + VRPSRLLNG SGYMLTYEDREGDWMLVGDVPWGMFT++VKRLRIMRATE 
Sbjct: 241 TGSSIKEHDGVRPSRLLNGHSGYMLTYEDREGDWMLVGDVPWGMFTHSVKRLRIMRATEL 282

Query: 315 NQIGR 318
           NQIGR
Sbjct: 301 NQIGR 282

[Close]

BLAST of Clc07G01360 vs. ExPASy TrEMBL
Match: A0A6J1HRM2 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111466867 PE=3 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 6.8e-115
Identity = 235/313 (75.08%), Postives = 251/313 (80.19%), Query Frame = 0


Query: 5   GRSPQVSHHSMSTISKDDNMVLSSEDSSCPDEAEIELGLGLCLGVRDSARKIHKIPSGVQ 64
           G S  VS  SMSTI KD+N++LSSE SSCPDE+EIELGLGL LGVRDS RKI K+ S  Q
Sbjct: 6   GGSGVVSEESMSTICKDENVMLSSEGSSCPDESEIELGLGLSLGVRDS-RKIQKV-SIAQ 65

Query: 65  FGRILTAEDFPSSISSHSSMSSSSSTSSVCSSSSLRGVNVTDGSKRNSDSAATINGGRSS 124
           FGRILTAEDF               +SS+CSSSSL GVNVT+GSKRNSDSAATINGGRSS
Sbjct: 66  FGRILTAEDF---------------SSSICSSSSLSGVNVTNGSKRNSDSAATINGGRSS 125

Query: 125 QVVGWPPIRASRISTLVNQAKPHSIEEFKVDAGKNKNKHQEAGALKGVSGKNQPNEESRN 184
           QVVGWPPIRASRISTLVNQAKPHS+EEFK  AGKNKNKH  AG L GVS +N+ NEESRN
Sbjct: 126 QVVGWPPIRASRISTLVNQAKPHSVEEFKAVAGKNKNKHTAAGTLNGVSDRNKANEESRN 185

Query: 185 SRNSVYVRVNMDGVLIGRKVNLSAHSSYETLAQTIENMFLDPTALVDSSGIKVDIFCLVT 244
           SRNSVYV+VNMDGVLIGRKVNLSAHSSYE LAQTIENMFLDPTALVDS            
Sbjct: 186 SRNSVYVKVNMDGVLIGRKVNLSAHSSYEALAQTIENMFLDPTALVDS------------ 245

Query: 245 DNDALSSDTGSSIKERNVVRPSRLLNGLSGYMLTYEDREGDWMLVGDVPWGMFTYTVKRL 304
                   TGSSIKE ++ RPSRLLNGLSGYMLTYEDREGDWMLVGDVPWGMFT +VKRL
Sbjct: 246 --------TGSSIKEHDIARPSRLLNGLSGYMLTYEDREGDWMLVGDVPWGMFTQSVKRL 281

Query: 305 RIMRATEANQIGR 318
           RIM+A EANQIGR
Sbjct: 306 RIMKAAEANQIGR 281

[Close]

BLAST of Clc07G01360 vs. ExPASy TrEMBL
Match: A0A6J1HKN6 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111463887 PE=3 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 1.3e-113
Identity = 232/313 (74.12%), Postives = 250/313 (79.87%), Query Frame = 0


Query: 5   GRSPQVSHHSMSTISKDDNMVLSSEDSSCPDEAEIELGLGLCLGVRDSARKIHKIPSGVQ 64
           G S  VS  SMSTI KD+N++LSSE SSCPDE+EIELGLGL LGVRDS RKI K+ S  Q
Sbjct: 6   GGSGVVSEESMSTICKDENVMLSSEGSSCPDESEIELGLGLSLGVRDS-RKIQKV-SVAQ 65

Query: 65  FGRILTAEDFPSSISSHSSMSSSSSTSSVCSSSSLRGVNVTDGSKRNSDSAATINGGRSS 124
           FGRILTAEDF               +SS+CSSSSL GVNVT+GSKRNSDSAATINGGR S
Sbjct: 66  FGRILTAEDF---------------SSSICSSSSLSGVNVTNGSKRNSDSAATINGGRGS 125

Query: 125 QVVGWPPIRASRISTLVNQAKPHSIEEFKVDAGKNKNKHQEAGALKGVSGKNQPNEESRN 184
           QVVGWPPIRASRISTLVNQAK HS+EEFK  AGKNKNKH EAG L GVS +N+ NEE R 
Sbjct: 126 QVVGWPPIRASRISTLVNQAKSHSVEEFKAVAGKNKNKHTEAGTLNGVSDRNKANEERRT 185

Query: 185 SRNSVYVRVNMDGVLIGRKVNLSAHSSYETLAQTIENMFLDPTALVDSSGIKVDIFCLVT 244
           SRNSVYV+VNMDGVLIGRKVNLSAHSSYETLAQT+ENMFLDPTALVDS            
Sbjct: 186 SRNSVYVKVNMDGVLIGRKVNLSAHSSYETLAQTVENMFLDPTALVDS------------ 245

Query: 245 DNDALSSDTGSSIKERNVVRPSRLLNGLSGYMLTYEDREGDWMLVGDVPWGMFTYTVKRL 304
                   TGSSIKE ++VRPSRLLNGLSGYMLTYED+EGDWMLVGDVPWGMFT +VKRL
Sbjct: 246 --------TGSSIKEHDIVRPSRLLNGLSGYMLTYEDKEGDWMLVGDVPWGMFTQSVKRL 281

Query: 305 RIMRATEANQIGR 318
           RIM+A EANQIGR
Sbjct: 306 RIMKAAEANQIGR 281

[Close]

BLAST of Clc07G01360 vs. TAIR 10
Match: AT2G33310.1 (auxin-induced protein 13 )

HSP 1 Score: 168.3 bits (425), Expect = 9.8e-42
Identity = 119/284 (41.90%), Postives = 153/284 (53.87%), Query Frame = 0


Query: 36  EAEIELGLGLCLGVRDSARKIHKIPSGVQF---GRILTAEDFPSSISSHSSMSSSSSTSS 95
           E+E+ELGLGL LG   +A KI K   G  +   GR+LTA+DFPS                
Sbjct: 11  ESELELGLGLSLG-GGTAAKIGKSGGGGAWGERGRLLTAKDFPSV--------------- 70

Query: 96  VCSSSSLRGVNVTDGSKRNSDSAATINGG--RSSQVVGWPPIRASRISTLVNQAKPHSIE 155
                         GSKR +DSA+       RSSQVVGWPPI + R+++LVN     S  
Sbjct: 71  --------------GSKRAADSASHAGSSPPRSSQVVGWPPIGSHRMNSLVNNQATKSAR 130

Query: 156 EFKVDAGKNKNKHQE-AGALKGVSGKNQPNEESRNSRNSVYVRVNMDGVLIGRKVNLSAH 215
           E + +AGK K K  E     K V+GK Q            +++VNMDGV IGRKV+L+AH
Sbjct: 131 E-EEEAGKKKVKDDEPKDVTKKVNGKVQVG----------FIKVNMDGVAIGRKVDLNAH 190

Query: 216 SSYETLAQTIENMFLDPTALVDSSGIKVDIFCLVTDNDALSSDTGSSIKERNVVRPSRLL 275
           SSYE LAQT+E+MF                           ++ G+        +P RLL
Sbjct: 191 SSYENLAQTLEDMF-------------------------FRTNPGTVGLTSQFTKPLRLL 228

Query: 276 NGLSGYMLTYEDREGDWMLVGDVPWGMFTYTVKRLRIMRATEAN 314
           +G S ++LTYED+EGDWMLVGDVPW MF  +VKRLR+M+ +EAN
Sbjct: 251 DGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEAN 228

[Close]

BLAST of Clc07G01360 vs. TAIR 10
Match: AT2G33310.3 (auxin-induced protein 13 )

HSP 1 Score: 168.3 bits (425), Expect = 9.8e-42
Identity = 119/284 (41.90%), Postives = 153/284 (53.87%), Query Frame = 0


Query: 36  EAEIELGLGLCLGVRDSARKIHKIPSGVQF---GRILTAEDFPSSISSHSSMSSSSSTSS 95
           E+E+ELGLGL LG   +A KI K   G  +   GR+LTA+DFPS                
Sbjct: 11  ESELELGLGLSLG-GGTAAKIGKSGGGGAWGERGRLLTAKDFPSV--------------- 70

Query: 96  VCSSSSLRGVNVTDGSKRNSDSAATINGG--RSSQVVGWPPIRASRISTLVNQAKPHSIE 155
                         GSKR +DSA+       RSSQVVGWPPI + R+++LVN     S  
Sbjct: 71  --------------GSKRAADSASHAGSSPPRSSQVVGWPPIGSHRMNSLVNNQATKSAR 130

Query: 156 EFKVDAGKNKNKHQE-AGALKGVSGKNQPNEESRNSRNSVYVRVNMDGVLIGRKVNLSAH 215
           E + +AGK K K  E     K V+GK Q            +++VNMDGV IGRKV+L+AH
Sbjct: 131 E-EEEAGKKKVKDDEPKDVTKKVNGKVQVG----------FIKVNMDGVAIGRKVDLNAH 190

Query: 216 SSYETLAQTIENMFLDPTALVDSSGIKVDIFCLVTDNDALSSDTGSSIKERNVVRPSRLL 275
           SSYE LAQT+E+MF                           ++ G+        +P RLL
Sbjct: 191 SSYENLAQTLEDMF-------------------------FRTNPGTVGLTSQFTKPLRLL 228

Query: 276 NGLSGYMLTYEDREGDWMLVGDVPWGMFTYTVKRLRIMRATEAN 314
           +G S ++LTYED+EGDWMLVGDVPW MF  +VKRLR+M+ +EAN
Sbjct: 251 DGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEAN 228

[Close]

BLAST of Clc07G01360 vs. TAIR 10
Match: AT4G28640.3 (indole-3-acetic acid inducible 11 )

HSP 1 Score: 167.9 bits (424), Expect = 1.3e-41
Identity = 123/304 (40.46%), Postives = 169/304 (55.59%), Query Frame = 0


Query: 14  SMSTISKDDNMVLSSEDSSCPDEAEIELGLGLCLGVRDSARKIHKIPSGVQFGRILTAED 73
           S S +S D+N+V+S EDSS P   E+ELGL L LG     RK      G +  R+     
Sbjct: 9   SASALSNDENLVVSCEDSSSPIGNELELGLTLSLG-----RK------GYRDCRV----- 68

Query: 74  FPSSISSHSSMSSSSSTSSVCSSSSLRGVNVTDGSKRNSDSAATINGGRSSQVVGWPPIR 133
                  ++  SSSSS     SSSSL   +V  G KR +DS A  +G    QVVGWPPIR
Sbjct: 69  -------YADDSSSSS-----SSSSLSRASVIAGIKRTADSMAATSG----QVVGWPPIR 128

Query: 134 ASRISTLVNQAKPHSIEEFKVDAGKNKNKHQEAGALKGVSGKNQPNEESRNSRNSVYVRV 193
             R++++VNQAK  + E+  ++  +  NK++                +S   RNS++V+V
Sbjct: 129 TYRMNSMVNQAKASATEDPNLEISQAVNKNR---------------SDSTKMRNSMFVKV 188

Query: 194 NMDGVLIGRKVNLSAHSSYETLAQTIENMFLDPTALVDSSGIKVDIFCLVTDNDALSSDT 253
            MDG+ IGRK++L+AH  YE+L+ T+E MFL P         K+    L TD        
Sbjct: 189 TMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKP---------KLGSRTLETDG------- 242

Query: 254 GSSIKERNVVRPSRLL-NGLSGYMLTYEDREGDWMLVGDVPWGMFTYTVKRLRIMRATEA 313
                  ++  P ++L +G SG +LTYED+EGDWMLVGDVPWGMF  +V+RLRIM+ +EA
Sbjct: 249 -------HMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEA 242

Query: 314 NQIG 317
              G
Sbjct: 309 TGKG 242

[Close]

BLAST of Clc07G01360 vs. TAIR 10
Match: AT4G28640.1 (indole-3-acetic acid inducible 11 )

HSP 1 Score: 167.2 bits (422), Expect = 2.2e-41
Identity = 122/300 (40.67%), Postives = 168/300 (56.00%), Query Frame = 0


Query: 14  SMSTISKDDNMVLSSEDSSCPDEAEIELGLGLCLGVRDSARKIHKIPSGVQFGRILTAED 73
           S S +S D+N+V+S EDSS P   E+ELGL L LG     RK      G +  R+     
Sbjct: 9   SASALSNDENLVVSCEDSSSPIGNELELGLTLSLG-----RK------GYRDCRV----- 68

Query: 74  FPSSISSHSSMSSSSSTSSVCSSSSLRGVNVTDGSKRNSDSAATINGGRSSQVVGWPPIR 133
                  ++  SSSSS     SSSSL   +V  G KR +DS A  +G    QVVGWPPIR
Sbjct: 69  -------YADDSSSSS-----SSSSLSRASVIAGIKRTADSMAATSG----QVVGWPPIR 128

Query: 134 ASRISTLVNQAKPHSIEEFKVDAGKNKNKHQEAGALKGVSGKNQPNEESRNSRNSVYVRV 193
             R++++VNQAK  + E+  ++  +  NK++                +S   RNS++V+V
Sbjct: 129 TYRMNSMVNQAKASATEDPNLEISQAVNKNR---------------SDSTKMRNSMFVKV 188

Query: 194 NMDGVLIGRKVNLSAHSSYETLAQTIENMFLDPTALVDSSGIKVDIFCLVTDNDALSSDT 253
            MDG+ IGRK++L+AH  YE+L+ T+E MFL P         K+    L TD        
Sbjct: 189 TMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKP---------KLGSRTLETDG------- 238

Query: 254 GSSIKERNVVRPSRLL-NGLSGYMLTYEDREGDWMLVGDVPWGMFTYTVKRLRIMRATEA 313
                  ++  P ++L +G SG +LTYED+EGDWMLVGDVPWGMF  +V+RLRIM+ +EA
Sbjct: 249 -------HMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEA 238

[Close]

BLAST of Clc07G01360 vs. TAIR 10
Match: AT4G28640.2 (indole-3-acetic acid inducible 11 )

HSP 1 Score: 167.2 bits (422), Expect = 2.2e-41
Identity = 122/300 (40.67%), Postives = 168/300 (56.00%), Query Frame = 0


Query: 14  SMSTISKDDNMVLSSEDSSCPDEAEIELGLGLCLGVRDSARKIHKIPSGVQFGRILTAED 73
           S S +S D+N+V+S EDSS P   E+ELGL L LG     RK      G +  R+     
Sbjct: 9   SASALSNDENLVVSCEDSSSPIGNELELGLTLSLG-----RK------GYRDCRV----- 68

Query: 74  FPSSISSHSSMSSSSSTSSVCSSSSLRGVNVTDGSKRNSDSAATINGGRSSQVVGWPPIR 133
                  ++  SSSSS     SSSSL   +V  G KR +DS A  +G    QVVGWPPIR
Sbjct: 69  -------YADDSSSSS-----SSSSLSRASVIAGIKRTADSMAATSG----QVVGWPPIR 128

Query: 134 ASRISTLVNQAKPHSIEEFKVDAGKNKNKHQEAGALKGVSGKNQPNEESRNSRNSVYVRV 193
             R++++VNQAK  + E+  ++  +  NK++                +S   RNS++V+V
Sbjct: 129 TYRMNSMVNQAKASATEDPNLEISQAVNKNR---------------SDSTKMRNSMFVKV 188

Query: 194 NMDGVLIGRKVNLSAHSSYETLAQTIENMFLDPTALVDSSGIKVDIFCLVTDNDALSSDT 253
            MDG+ IGRK++L+AH  YE+L+ T+E MFL P         K+    L TD        
Sbjct: 189 TMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKP---------KLGSRTLETDG------- 238

Query: 254 GSSIKERNVVRPSRLL-NGLSGYMLTYEDREGDWMLVGDVPWGMFTYTVKRLRIMRATEA 313
                  ++  P ++L +G SG +LTYED+EGDWMLVGDVPWGMF  +V+RLRIM+ +EA
Sbjct: 249 -------HMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEA 238

The following BLAST results are available for this feature:

BLAST of Clc07G01360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888843.1	5.4e-135	87.17	auxin-responsive protein IAA11-like [Benincasa hispida]	[more]
XP_008447370.1	4.8e-123	80.65	PREDICTED: auxin-responsive protein IAA11 isoform X1 [Cucumis melo]	[more]
XP_008447371.1	4.5e-121	80.32	PREDICTED: auxin-responsive protein IAA11 isoform X2 [Cucumis melo]	[more]
XP_004152002.2	2.2e-120	78.39	auxin-responsive protein IAA11 isoform X1 [Cucumis sativus] >KAE8650830.1 hypoth...	[more]
XP_031737490.1	2.1e-118	78.06	auxin-responsive protein IAA11 isoform X2 [Cucumis sativus]	[more]

BLAST of Clc07G01360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38829	3.1e-40	40.67	Auxin-responsive protein IAA11 OS=Arabidopsis thaliana OX=3702 GN=IAA11 PE=1 SV=...	[more]
Q38831	9.0e-40	41.40	Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=...	[more]
Q38830	5.4e-37	40.99	Auxin-responsive protein IAA12 OS=Arabidopsis thaliana OX=3702 GN=IAA12 PE=1 SV=...	[more]
A2XB18	1.5e-31	37.59	Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica OX=39946 GN=IAA10 P...	[more]
Q0DWF2	1.5e-31	37.59	Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA10...	[more]

BLAST of Clc07G01360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BH91	2.3e-123	80.65	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103489837 PE=3 SV=1	[more]
A0A1S3BHW4	2.2e-121	80.32	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103489837 PE=3 SV=1	[more]
A0A0A0LBH3	5.9e-119	78.69	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_3G610800 PE=3 SV=1	[more]
A0A6J1HRM2	6.8e-115	75.08	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111466867 PE=3 SV=1	[more]
A0A6J1HKN6	1.3e-113	74.12	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111463887 PE=3 SV=1	[more]

BLAST of Clc07G01360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33310.1	9.8e-42	41.90	auxin-induced protein 13	[more]
AT2G33310.3	9.8e-42	41.90	auxin-induced protein 13	[more]
AT4G28640.3	1.3e-41	40.46	indole-3-acetic acid inducible 11	[more]
AT4G28640.1	2.2e-41	40.67	indole-3-acetic acid inducible 11	[more]
AT4G28640.2	2.2e-41	40.67	indole-3-acetic acid inducible 11	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 39..315 e-value: 9.3E-50 score: 169.7
None	No IPR available	GENE3D	3.10.20.90		coord: 182..317 e-value: 2.1E-34 score: 119.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..186
None	No IPR available	PANTHER	PTHR31734:SF190	AUXIN-RESPONSIVE PROTEIN IAA11	coord: 18..315
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 180..308
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 18..315
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 188..311 score: 19.825678

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G01360.2	Clc07G01360.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding