Clc07G00940 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G00940
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	ethylene-responsive transcription factor 1B-like
Location	ClcChr07: 999707 .. 1000561 (+)
RNA-Seq Expression	Clc07G00940
Synteny	Clc07G00940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GATAAATCCGCCCAAGTTATTTAATTCAATTATTTTGTGGATTGGAATTCTTCATTTATTCGGTTTCTATATATAGGTCTAAATATTCAAAATTTGTTTTAAAGCACGGAAACAGAAAGAAAACAGAGTCCAATTCCATTTCTAGAAGCCGAAAAGAATCACCGTGAAGATTGAAGTTTTCCGGTTGAATTTGAAATGGAATCCTCTTATTTTTCGTTTTCCGATTCGGATTTCTCGACGGAATCTTCATTCGGATCAGCGGAATCATCGTTCTCATGGAGTGAGTTTTTCTCGATTCACAGTACCCTAGAAAACTCAATCTCACTACACGGAGAATTTCTCGGGAATCAAACATCGGAATCGGAATCGAAAATTGTAGTGAAGGAAGAAACCGAAGTGAGTTCGATTGATTTCGAGGAGGAGAAAGAAAGGAAGACAACGGAGAAGAGTTACAGAGGAGTGAGACGGCGGCCGTGGGGGAAATACGCGGCGGAGATTAGGGATTCGACGAGACATGGAGTTAGGGTTTGGCTTGGAACTTTTGATAGCGCTGAAGCTGCGGCTTTAGCTTATGATCAAGCGGCATTTTCGATGAGAGGAGCAATGGCGGTGCTGAATTTTCCGGTGGAAATGGTGAGGGAATCACTGAAGGATATTAAGTATCAACTGGAAGAAGGATGTTCGCCGGTGGTGGCTTTGAAGAGGAAACACTCAATGAGAAGGAAATCGGCGGCGGCGGCGGTGAAAAGCCAAGGGGCGGCGGAGAAGAAGAAGATGAAGAAAAACAACAATGTGGTGATTTTAGAAGATTTGGGAACAGAGTATTTGGAGGAACTTTTGATGCTAAGTTCATGA

mRNA sequence

GATAAATCCGCCCAAGTTATTTAATTCAATTATTTTGTGGATTGGAATTCTTCATTTATTCGGTTTCTATATATAGGTCTAAATATTCAAAATTTGTTTTAAAGCACGGAAACAGAAAGAAAACAGAGTCCAATTCCATTTCTAGAAGCCGAAAAGAATCACCGTGAAGATTGAAGTTTTCCGGTTGAATTTGAAATGGAATCCTCTTATTTTTCGTTTTCCGATTCGGATTTCTCGACGGAATCTTCATTCGGATCAGCGGAATCATCGTTCTCATGGAGTGAGTTTTTCTCGATTCACAGTACCCTAGAAAACTCAATCTCACTACACGGAGAATTTCTCGGGAATCAAACATCGGAATCGGAATCGAAAATTGTAGTGAAGGAAGAAACCGAAGTGAGTTCGATTGATTTCGAGGAGGAGAAAGAAAGGAAGACAACGGAGAAGAGTTACAGAGGAGTGAGACGGCGGCCGTGGGGGAAATACGCGGCGGAGATTAGGGATTCGACGAGACATGGAGTTAGGGTTTGGCTTGGAACTTTTGATAGCGCTGAAGCTGCGGCTTTAGCTTATGATCAAGCGGCATTTTCGATGAGAGGAGCAATGGCGGTGCTGAATTTTCCGGTGGAAATGGTGAGGGAATCACTGAAGGATATTAAGTATCAACTGGAAGAAGGATGTTCGCCGGTGGTGGCTTTGAAGAGGAAACACTCAATGAGAAGGAAATCGGCGGCGGCGGCGGTGAAAAGCCAAGGGGCGGCGGAGAAGAAGAAGATGAAGAAAAACAACAATGTGGTGATTTTAGAAGATTTGGGAACAGAGTATTTGGAGGAACTTTTGATGCTAAGTTCATGA

Coding sequence (CDS)

ATGGAATCCTCTTATTTTTCGTTTTCCGATTCGGATTTCTCGACGGAATCTTCATTCGGATCAGCGGAATCATCGTTCTCATGGAGTGAGTTTTTCTCGATTCACAGTACCCTAGAAAACTCAATCTCACTACACGGAGAATTTCTCGGGAATCAAACATCGGAATCGGAATCGAAAATTGTAGTGAAGGAAGAAACCGAAGTGAGTTCGATTGATTTCGAGGAGGAGAAAGAAAGGAAGACAACGGAGAAGAGTTACAGAGGAGTGAGACGGCGGCCGTGGGGGAAATACGCGGCGGAGATTAGGGATTCGACGAGACATGGAGTTAGGGTTTGGCTTGGAACTTTTGATAGCGCTGAAGCTGCGGCTTTAGCTTATGATCAAGCGGCATTTTCGATGAGAGGAGCAATGGCGGTGCTGAATTTTCCGGTGGAAATGGTGAGGGAATCACTGAAGGATATTAAGTATCAACTGGAAGAAGGATGTTCGCCGGTGGTGGCTTTGAAGAGGAAACACTCAATGAGAAGGAAATCGGCGGCGGCGGCGGTGAAAAGCCAAGGGGCGGCGGAGAAGAAGAAGATGAAGAAAAACAACAATGTGGTGATTTTAGAAGATTTGGGAACAGAGTATTTGGAGGAACTTTTGATGCTAAGTTCATGA

Protein sequence

MESSYFSFSDSDFSTESSFGSAESSFSWSEFFSIHSTLENSISLHGEFLGNQTSESESKIVVKEETEVSSIDFEEEKERKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAYDQAAFSMRGAMAVLNFPVEMVRESLKDIKYQLEEGCSPVVALKRKHSMRRKSAAAAVKSQGAAEKKKMKKNNNVVILEDLGTEYLEELLMLSS

Homology

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BLAST of Clc07G00940 vs. NCBI nr
Match: XP_008447432.1 (PREDICTED: ethylene-responsive transcription factor 1B-like [Cucumis melo] >KAA0038078.1 ethylene-responsive transcription factor 1B-like [Cucumis melo var. makuwa] >TYK20527.1 ethylene-responsive transcription factor 1B-like [Cucumis melo var. makuwa])

HSP 1 Score: 349.0 bits (894), Expect = 3.0e-92
Identity = 194/219 (88.58%), Postives = 202/219 (92.24%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSAESSFSWSEFFSIHSTLENSISLHGEFLGNQTSESESKI 60
           MESSYFSFSDSDFSTESSFGS ESSFSWSEFFSIHS LENS  +  EFLGNQ SESESKI
Sbjct: 1   MESSYFSFSDSDFSTESSFGSVESSFSWSEFFSIHSALENSTGVE-EFLGNQKSESESKI 60

Query: 61  VVKEETEVSSIDFEEEKERKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120
           VVKEE EV+SIDF+EEK+RKTTEK+YRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE
Sbjct: 61  VVKEEIEVNSIDFKEEKQRKTTEKNYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120

Query: 121 AAALAYDQAAFSMRGAMAVLNFPVEMVRESLKDIKYQLEEGCSPVVALKRKHSMRRKSAA 180
           AAALAYDQAAFSMRG MAVLNFPVEMVRESL+DI+YQLEEGCSPVVALK+KHSMRRKS A
Sbjct: 121 AAALAYDQAAFSMRGTMAVLNFPVEMVRESLQDIEYQLEEGCSPVVALKKKHSMRRKSVA 180

Query: 181 AAVKSQGAAEKKKMKKNNNVVILEDLGTEYLEELLMLSS 220
           AA     A EKKKMKK NNVVILEDLGTEYLEELLMLSS
Sbjct: 181 AAT---AAVEKKKMKKKNNVVILEDLGTEYLEELLMLSS 215

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BLAST of Clc07G00940 vs. NCBI nr
Match: XP_004151982.1 (ethylene-response factor C3 [Cucumis sativus])

HSP 1 Score: 340.1 bits (871), Expect = 1.4e-89
Identity = 189/219 (86.30%), Postives = 201/219 (91.78%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSAESSFSWSEFFSIHSTLENSISLHGEFLGNQTSESESKI 60
           MESSYFSFSDSDFST+SSFGS ESSFSW++F SIHS LENSI +  EFLG Q  +SESKI
Sbjct: 1   MESSYFSFSDSDFSTDSSFGSTESSFSWTDFLSIHSALENSIGIE-EFLGKQKLDSESKI 60

Query: 61  VVKEETEVSSIDFEEEKERKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120
           VVKEE EV+SIDF+EEK+RKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE
Sbjct: 61  VVKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120

Query: 121 AAALAYDQAAFSMRGAMAVLNFPVEMVRESLKDIKYQLEEGCSPVVALKRKHSMRRKSAA 180
           AAALAYDQAAFSMRG MAVLNFPVEMVRESL+DI+Y+LEEGCSPVVALKRKHSMRRKS A
Sbjct: 121 AAALAYDQAAFSMRGTMAVLNFPVEMVRESLQDIEYELEEGCSPVVALKRKHSMRRKSVA 180

Query: 181 AAVKSQGAAEKKKMKKNNNVVILEDLGTEYLEELLMLSS 220
           AA  +  A EKKKMKK NNVVILEDLGTEYLEELLMLSS
Sbjct: 181 AATAAV-AVEKKKMKKKNNVVILEDLGTEYLEELLMLSS 217

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BLAST of Clc07G00940 vs. NCBI nr
Match: KAE8650665.1 (hypothetical protein Csa_011527 [Cucumis sativus])

HSP 1 Score: 340.1 bits (871), Expect = 1.4e-89
Identity = 189/219 (86.30%), Postives = 201/219 (91.78%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSAESSFSWSEFFSIHSTLENSISLHGEFLGNQTSESESKI 60
           MESSYFSFSDSDFST+SSFGS ESSFSW++F SIHS LENSI +  EFLG Q  +SESKI
Sbjct: 1   MESSYFSFSDSDFSTDSSFGSTESSFSWTDFLSIHSALENSIGIE-EFLGKQKLDSESKI 60

Query: 61  VVKEETEVSSIDFEEEKERKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120
           VVKEE EV+SIDF+EEK+RKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE
Sbjct: 61  VVKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120

Query: 121 AAALAYDQAAFSMRGAMAVLNFPVEMVRESLKDIKYQLEEGCSPVVALKRKHSMRRKSAA 180
           AAALAYDQAAFSMRG MAVLNFPVEMVRESL+DI+Y+LEEGCSPVVALKRKHSMRRKS A
Sbjct: 121 AAALAYDQAAFSMRGTMAVLNFPVEMVRESLQDIEYELEEGCSPVVALKRKHSMRRKSVA 180

Query: 181 AAVKSQGAAEKKKMKKNNNVVILEDLGTEYLEELLMLSS 220
           AA  +  A EKKKMKK NNVVILEDLGTEYLEELLMLSS
Sbjct: 181 AATAAV-AVEKKKMKKKNNVVILEDLGTEYLEELLMLSS 217

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BLAST of Clc07G00940 vs. NCBI nr
Match: XP_038888342.1 (ethylene-response factor C3-like [Benincasa hispida])

HSP 1 Score: 336.7 bits (862), Expect = 1.5e-88
Identity = 190/219 (86.76%), Postives = 196/219 (89.50%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSAESSFSWSEFFSIHSTLENSISLHGEFLGNQTSESESKI 60
           MESSYFSF DSDFS E+SFGS ESSFSW+EFF        SISL  EF+GNQTSESESKI
Sbjct: 1   MESSYFSFIDSDFSPETSFGSTESSFSWNEFF--------SISLQEEFIGNQTSESESKI 60

Query: 61  VVKEETEVSSIDFEEEKERKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120
           VVKEE EV+SIDFEEEK RKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE
Sbjct: 61  VVKEEIEVNSIDFEEEKHRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120

Query: 121 AAALAYDQAAFSMRGAMAVLNFPVEMVRESLKDIKYQLEEGCSPVVALKRKHSMRRKSAA 180
           AAALAYDQAAFSMRGAMAVLNFPVEMVRESL+DIKYQLEEGCSPVVALKRKHSMRRKS+A
Sbjct: 121 AAALAYDQAAFSMRGAMAVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHSMRRKSSA 180

Query: 181 AAVKSQGAAEKKKMKKNNNVVILEDLGTEYLEELLMLSS 220
           A      A EKKKMKK NNVVILEDLGTEYLEELLMLSS
Sbjct: 181 AT----AAVEKKKMKKKNNVVILEDLGTEYLEELLMLSS 207

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BLAST of Clc07G00940 vs. NCBI nr
Match: XP_023534089.1 (ethylene-responsive transcription factor 1B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330.1 bits (845), Expect = 1.5e-86
Identity = 187/220 (85.00%), Postives = 198/220 (90.00%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSAES-SFSWSEFFSIHSTLENSISLHGEFLGNQTSESESK 60
           MES YFSFSDSDFSTE S GS E  SFSWS+FFSI+S LENS+SL GEFLG+Q SESE K
Sbjct: 1   MESYYFSFSDSDFSTECSLGSPEELSFSWSDFFSINSVLENSLSLPGEFLGHQPSESELK 60

Query: 61  IVVKEETEVSSIDFEEEKERKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSA 120
           I VKEE EVSSID E EKERKTTEK+YRGVRRRPWGKYAAEIRDSTR GVRVWLGTFDSA
Sbjct: 61  IAVKEEIEVSSIDLEREKERKTTEKNYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSA 120

Query: 121 EAAALAYDQAAFSMRGAMAVLNFPVEMVRESLKDIKYQLEEGCSPVVALKRKHSMRRKSA 180
           EAAALAYDQAA+SMRGA+AVLNFPVEMVRESL++IKY+LEEG SPVVALKRKHS+RRKS 
Sbjct: 121 EAAALAYDQAAYSMRGALAVLNFPVEMVRESLQEIKYELEEGLSPVVALKRKHSLRRKSG 180

Query: 181 AAAVKSQGAAEKKKMKKNNNVVILEDLGTEYLEELLMLSS 220
           AAA KSQG AE KKMKK  NVVILEDLGTEYLEELLMLSS
Sbjct: 181 AAA-KSQGVAETKKMKKKKNVVILEDLGTEYLEELLMLSS 219

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BLAST of Clc07G00940 vs. ExPASy Swiss-Prot
Match: Q8LDC8 (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=ERF1B PE=1 SV=2)

HSP 1 Score: 176.0 bits (445), Expect = 4.6e-43
Identity = 112/211 (53.08%), Postives = 143/211 (67.77%), Query Frame = 0


Query: 11  SDFSTESSFGSAESSFSWSEFFSIHSTLENSISLHGEFLGNQTSESESKIVVKEETEVSS 70
           S FS E S GS+  SFS        S+  N+ SL   F  N + E     ++++ T+ + 
Sbjct: 11  SGFSPEYSIGSSPDSFS--------SSSSNNYSL--PFNENDSEEMFLYGLIEQSTQQTY 70

Query: 71  IDFEEEK------ERKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAAL 130
           ID + +         + +EKSYRGVRRRPWGK+AAEIRDSTR+G+RVWLGTF+SAE AAL
Sbjct: 71  IDSDSQDLPIKSVSSRKSEKSYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAAL 130

Query: 131 AYDQAAFSMRGAMAVLNFPVEMVRESLKDIKYQLEEGCSPVVALKRKHSMRRKSAAAAVK 190
           AYDQAAFSMRG+ A+LNF  E V+ESL +IKY  E+GCSPVVALKRKHSMRR+      K
Sbjct: 131 AYDQAAFSMRGSSAILNFSAERVQESLSEIKYTYEDGCSPVVALKRKHSMRRRMTNK--K 190

Query: 191 SQGAAEKKKMKKNNNVVILEDLGTEYLEELL 216
           ++ +    +  K +NVV+ EDLG +YLEELL
Sbjct: 191 TKDSDFDHRSVKLDNVVVFEDLGEQYLEELL 209

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BLAST of Clc07G00940 vs. ExPASy Swiss-Prot
Match: A0A3Q7I5Y9 (Ethylene-response factor C3 OS=Solanum lycopersicum OX=4081 GN=ERF.C.3 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 3.0e-42
Identity = 102/188 (54.26%), Postives = 138/188 (73.40%), Query Frame = 0


Query: 32  FSIHSTLENSI-SLHGEFLGNQTSESESKIVVKEETEVSSIDFEEEKERKTTEKSYRGVR 91
           F+++ T +  + +L  E    +T  S S   +KEE EV+S  +EEE++    +K+YRGVR
Sbjct: 18  FNVNDTQDMLLYNLVAEGSSQETVNSSSSYGIKEE-EVTS--YEEERK----DKNYRGVR 77

Query: 92  RRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAYDQAAFSMRGAMAVLNFPVEMVRES 151
           +RPWGKYAAEIRDSTR+GVRVWLGTFD+AE AALAYDQAAF+MRG+MA+LNFPVE+V+ES
Sbjct: 78  KRPWGKYAAEIRDSTRNGVRVWLGTFDNAEEAALAYDQAAFAMRGSMAILNFPVEIVKES 137

Query: 152 LKDIKYQLEEGCSPVVALKRKHSMRRKSAAAAVKSQGAAEKKKMKKNNNVVILEDLGTEY 211
           L ++K + +  CSPV+ LK+++SMRRKS +           +K +   +VV+ EDLG EY
Sbjct: 138 LNEMKCRFDGNCSPVIELKKRYSMRRKSVS-----------RKNRARKDVVVFEDLGAEY 187

Query: 212 LEELLMLS 219
           LEELL+ S
Sbjct: 198 LEELLISS 187

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BLAST of Clc07G00940 vs. ExPASy Swiss-Prot
Match: Q9LND1 (Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana OX=3702 GN=ERF094 PE=2 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 4.9e-37
Identity = 106/250 (42.40%), Postives = 154/250 (61.60%), Query Frame = 0


Query: 2   ESSYFSFSDSDFSTESSFGSAESSFSWSEFFSIHSTLENSISLHG-------EFLGNQTS 61
           ++++ S   S  ++ SS  S++ SF W E F +H + + S  L         +F   ++S
Sbjct: 4   QTNFLSGEFSPENSSSSSWSSQESFLWEESF-LHQSFDQSFLLSSPTDNYCDDFFAFESS 63

Query: 62  ESESKIVVKEETEVSSIDFEEEKERKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLG 121
                 ++KEE + +++  EEE      EKSYRGVR+RPWGK+AAEIRDSTR G+RVWLG
Sbjct: 64  ------IIKEEGKEATVAAEEE------EKSYRGVRKRPWGKFAAEIRDSTRKGIRVWLG 123

Query: 122 TFDSAEAAALAYDQAAFSMRGAMAVLNFPVEMVRESLKDIK-YQLEEGCSPVVALKRKHS 181
           TFD+AEAAALAYDQAAF+++G++AVLNFP ++V ESL+ ++   L +G SPV+ALKRKHS
Sbjct: 124 TFDTAEAAALAYDQAAFALKGSLAVLNFPADVVEESLRKMENVNLNDGESPVIALKRKHS 183

Query: 182 MRRK-----------------------SAAAAVKSQGAAEKKK-----MKKNNNVVILED 216
           MR +                       S++++  S  +  +K+      + N  +V+LED
Sbjct: 184 MRNRPRGKKKSSSSSTLTSSPSSSSSYSSSSSSSSLSSRSRKQSVVMTQESNTTLVVLED 240

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BLAST of Clc07G00940 vs. ExPASy Swiss-Prot
Match: Q8VYM0 (Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=ERF15 PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.4e-36
Identity = 102/236 (43.22%), Postives = 149/236 (63.14%), Query Frame = 0


Query: 11  SDFSTESSFGSAESSFSWSE--FFSIHSTLENSISLHGEFLGNQTSESESKIVVKEETEV 70
           S +S+ SS+ S++ S  W+E  F    S  +     + ++  +  S    ++++KEE + 
Sbjct: 7   SMYSSPSSWSSSQESLLWNESCFLDQSSEPQAFFCPNYDYSDDFFSFESPEMMIKEEIQN 66

Query: 71  SSIDFEEEKERK--TTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAY 130
             +   EE+E+     E+SYRGVR+RPWGK+AAEIRDSTR+G+RVWLGTFD AE AALAY
Sbjct: 67  GDVSNSEEEEKVGIDEERSYRGVRKRPWGKFAAEIRDSTRNGIRVWLGTFDKAEEAALAY 126

Query: 131 DQAAFSMRGAMAVLNFPVEMVRESLKDIK-YQLEEGCSPVVALKRKHSMRRK-------- 190
           DQAAF+ +G++A LNFPVE+VRESLK ++   L +G SPV+ALKRKHS+R +        
Sbjct: 127 DQAAFATKGSLATLNFPVEVVRESLKKMENVNLHDGGSPVMALKRKHSLRNRPRGKKRSS 186

Query: 191 ------------SAAAAVKSQGAAEKKK---MKKNNNVVILEDLGTEYLEELLMLS 219
                       S++++  S   +  K+    +++  +V+ EDLG EYLE+LLM S
Sbjct: 187 SSSSSSSNSSSCSSSSSTSSTSRSSSKQSVVKQESGTLVVFEDLGAEYLEQLLMSS 242

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BLAST of Clc07G00940 vs. ExPASy Swiss-Prot
Match: O04681 (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum OX=4081 GN=PTI5 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.2e-24
Identity = 55/75 (73.33%), Postives = 61/75 (81.33%), Query Frame = 0


Query: 84  KSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAYDQAAFSMRGAMAVLNFP 143
           K YRGVRRRPWGKYAAEIRDS RHG RVWLGTF++AE AALAYD+AAF MRGA A+LNFP
Sbjct: 57  KKYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFP 116

Query: 144 VEMVRESLKDIKYQL 159
            E+V  S+   K  L
Sbjct: 117 SEIVNASVSVDKLSL 131

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BLAST of Clc07G00940 vs. ExPASy TrEMBL
Match: A0A5A7T5F2 (Ethylene-responsive transcription factor 1B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001090 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.5e-92
Identity = 194/219 (88.58%), Postives = 202/219 (92.24%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSAESSFSWSEFFSIHSTLENSISLHGEFLGNQTSESESKI 60
           MESSYFSFSDSDFSTESSFGS ESSFSWSEFFSIHS LENS  +  EFLGNQ SESESKI
Sbjct: 1   MESSYFSFSDSDFSTESSFGSVESSFSWSEFFSIHSALENSTGVE-EFLGNQKSESESKI 60

Query: 61  VVKEETEVSSIDFEEEKERKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120
           VVKEE EV+SIDF+EEK+RKTTEK+YRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE
Sbjct: 61  VVKEEIEVNSIDFKEEKQRKTTEKNYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120

Query: 121 AAALAYDQAAFSMRGAMAVLNFPVEMVRESLKDIKYQLEEGCSPVVALKRKHSMRRKSAA 180
           AAALAYDQAAFSMRG MAVLNFPVEMVRESL+DI+YQLEEGCSPVVALK+KHSMRRKS A
Sbjct: 121 AAALAYDQAAFSMRGTMAVLNFPVEMVRESLQDIEYQLEEGCSPVVALKKKHSMRRKSVA 180

Query: 181 AAVKSQGAAEKKKMKKNNNVVILEDLGTEYLEELLMLSS 220
           AA     A EKKKMKK NNVVILEDLGTEYLEELLMLSS
Sbjct: 181 AAT---AAVEKKKMKKKNNVVILEDLGTEYLEELLMLSS 215

[Close]

BLAST of Clc07G00940 vs. ExPASy TrEMBL
Match: A0A1S3BHE9 (ethylene-responsive transcription factor 1B-like OS=Cucumis melo OX=3656 GN=LOC103489880 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.5e-92
Identity = 194/219 (88.58%), Postives = 202/219 (92.24%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSAESSFSWSEFFSIHSTLENSISLHGEFLGNQTSESESKI 60
           MESSYFSFSDSDFSTESSFGS ESSFSWSEFFSIHS LENS  +  EFLGNQ SESESKI
Sbjct: 1   MESSYFSFSDSDFSTESSFGSVESSFSWSEFFSIHSALENSTGVE-EFLGNQKSESESKI 60

Query: 61  VVKEETEVSSIDFEEEKERKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120
           VVKEE EV+SIDF+EEK+RKTTEK+YRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE
Sbjct: 61  VVKEEIEVNSIDFKEEKQRKTTEKNYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120

Query: 121 AAALAYDQAAFSMRGAMAVLNFPVEMVRESLKDIKYQLEEGCSPVVALKRKHSMRRKSAA 180
           AAALAYDQAAFSMRG MAVLNFPVEMVRESL+DI+YQLEEGCSPVVALK+KHSMRRKS A
Sbjct: 121 AAALAYDQAAFSMRGTMAVLNFPVEMVRESLQDIEYQLEEGCSPVVALKKKHSMRRKSVA 180

Query: 181 AAVKSQGAAEKKKMKKNNNVVILEDLGTEYLEELLMLSS 220
           AA     A EKKKMKK NNVVILEDLGTEYLEELLMLSS
Sbjct: 181 AAT---AAVEKKKMKKKNNVVILEDLGTEYLEELLMLSS 215

[Close]

BLAST of Clc07G00940 vs. ExPASy TrEMBL
Match: A0A0A0L7G2 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G389850 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 6.8e-90
Identity = 189/219 (86.30%), Postives = 201/219 (91.78%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSAESSFSWSEFFSIHSTLENSISLHGEFLGNQTSESESKI 60
           MESSYFSFSDSDFST+SSFGS ESSFSW++F SIHS LENSI +  EFLG Q  +SESKI
Sbjct: 1   MESSYFSFSDSDFSTDSSFGSTESSFSWTDFLSIHSALENSIGIE-EFLGKQKLDSESKI 60

Query: 61  VVKEETEVSSIDFEEEKERKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120
           VVKEE EV+SIDF+EEK+RKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE
Sbjct: 61  VVKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120

Query: 121 AAALAYDQAAFSMRGAMAVLNFPVEMVRESLKDIKYQLEEGCSPVVALKRKHSMRRKSAA 180
           AAALAYDQAAFSMRG MAVLNFPVEMVRESL+DI+Y+LEEGCSPVVALKRKHSMRRKS A
Sbjct: 121 AAALAYDQAAFSMRGTMAVLNFPVEMVRESLQDIEYELEEGCSPVVALKRKHSMRRKSVA 180

Query: 181 AAVKSQGAAEKKKMKKNNNVVILEDLGTEYLEELLMLSS 220
           AA  +  A EKKKMKK NNVVILEDLGTEYLEELLMLSS
Sbjct: 181 AATAAV-AVEKKKMKKKNNVVILEDLGTEYLEELLMLSS 217

[Close]

BLAST of Clc07G00940 vs. ExPASy TrEMBL
Match: A0A6J1EX16 (ethylene-responsive transcription factor 1B-like OS=Cucurbita moschata OX=3662 GN=LOC111437308 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 4.6e-86
Identity = 186/220 (84.55%), Postives = 197/220 (89.55%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSAES-SFSWSEFFSIHSTLENSISLHGEFLGNQTSESESK 60
           MES YFSFSDSDFSTE S GS E  SFSWS+FFSI+S LENS+SL  EFLG+Q SESE K
Sbjct: 1   MESYYFSFSDSDFSTECSLGSPEELSFSWSDFFSINSVLENSLSLTDEFLGHQPSESELK 60

Query: 61  IVVKEETEVSSIDFEEEKERKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSA 120
           I VKEE EVSSID E EKERKTTEK+YRGVRRRPWGKYAAEIRDSTR GVRVWLGTFDSA
Sbjct: 61  IAVKEEIEVSSIDLEREKERKTTEKNYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSA 120

Query: 121 EAAALAYDQAAFSMRGAMAVLNFPVEMVRESLKDIKYQLEEGCSPVVALKRKHSMRRKSA 180
           EAAALAYDQAA+SMRGA+AVLNFPVEMVRESL++IKY+LEEG SPVVALKRKHS+RRKS 
Sbjct: 121 EAAALAYDQAAYSMRGALAVLNFPVEMVRESLQEIKYELEEGLSPVVALKRKHSLRRKSG 180

Query: 181 AAAVKSQGAAEKKKMKKNNNVVILEDLGTEYLEELLMLSS 220
           AAA KSQG AE KKMKK  NVVILEDLGTEYLEELLMLSS
Sbjct: 181 AAA-KSQGVAETKKMKKKKNVVILEDLGTEYLEELLMLSS 219

[Close]

BLAST of Clc07G00940 vs. ExPASy TrEMBL
Match: A0A6J1CY30 (ethylene-responsive transcription factor 1B-like OS=Momordica charantia OX=3673 GN=LOC111015318 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 1.0e-85
Identity = 185/221 (83.71%), Postives = 200/221 (90.50%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSA--ESSFSWSEFFSIHSTLENSISLHGEFLGNQTSESES 60
           ME+SYFSFSDSDFSTESSFGS+  ESSFSWSE FSIH     S++   +FLG+QTS +ES
Sbjct: 1   METSYFSFSDSDFSTESSFGSSEMESSFSWSEIFSIH----GSLAFPDDFLGSQTSGTES 60

Query: 61  KIVVKEETEVSSIDFEEEKERKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDS 120
           KIVVKEE EVSS DFEEEK+RKT EKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDS
Sbjct: 61  KIVVKEEIEVSSTDFEEEKQRKTPEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDS 120

Query: 121 AEAAALAYDQAAFSMRGAMAVLNFPVEMVRESLKDIKYQLEEGCSPVVALKRKHSMRRKS 180
           AEAAALAYDQAAFSMRG+MAVLNFPVEMVRESL+DIKYQLEEGCSPVVALKRKHS+RRKS
Sbjct: 121 AEAAALAYDQAAFSMRGSMAVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHSLRRKS 180

Query: 181 AAAAVKSQGAAEKKKMKKNNNVVILEDLGTEYLEELLMLSS 220
           AAAAV+     +KKK+KK NNV+ILEDLGTEYLEELLMLSS
Sbjct: 181 AAAAVE-----KKKKIKKTNNVMILEDLGTEYLEELLMLSS 212

[Close]

BLAST of Clc07G00940 vs. TAIR 10
Match: AT3G23240.1 (ethylene response factor 1 )

HSP 1 Score: 176.0 bits (445), Expect = 3.3e-44
Identity = 112/211 (53.08%), Postives = 143/211 (67.77%), Query Frame = 0


Query: 11  SDFSTESSFGSAESSFSWSEFFSIHSTLENSISLHGEFLGNQTSESESKIVVKEETEVSS 70
           S FS E S GS+  SFS        S+  N+ SL   F  N + E     ++++ T+ + 
Sbjct: 11  SGFSPEYSIGSSPDSFS--------SSSSNNYSL--PFNENDSEEMFLYGLIEQSTQQTY 70

Query: 71  IDFEEEK------ERKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAAL 130
           ID + +         + +EKSYRGVRRRPWGK+AAEIRDSTR+G+RVWLGTF+SAE AAL
Sbjct: 71  IDSDSQDLPIKSVSSRKSEKSYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAAL 130

Query: 131 AYDQAAFSMRGAMAVLNFPVEMVRESLKDIKYQLEEGCSPVVALKRKHSMRRKSAAAAVK 190
           AYDQAAFSMRG+ A+LNF  E V+ESL +IKY  E+GCSPVVALKRKHSMRR+      K
Sbjct: 131 AYDQAAFSMRGSSAILNFSAERVQESLSEIKYTYEDGCSPVVALKRKHSMRRRMTNK--K 190

Query: 191 SQGAAEKKKMKKNNNVVILEDLGTEYLEELL 216
           ++ +    +  K +NVV+ EDLG +YLEELL
Sbjct: 191 TKDSDFDHRSVKLDNVVVFEDLGEQYLEELL 209

[Close]

BLAST of Clc07G00940 vs. TAIR 10
Match: AT1G06160.1 (octadecanoid-responsive Arabidopsis AP2/ERF 59 )

HSP 1 Score: 156.0 bits (393), Expect = 3.5e-38
Identity = 106/250 (42.40%), Postives = 154/250 (61.60%), Query Frame = 0


Query: 2   ESSYFSFSDSDFSTESSFGSAESSFSWSEFFSIHSTLENSISLHG-------EFLGNQTS 61
           ++++ S   S  ++ SS  S++ SF W E F +H + + S  L         +F   ++S
Sbjct: 4   QTNFLSGEFSPENSSSSSWSSQESFLWEESF-LHQSFDQSFLLSSPTDNYCDDFFAFESS 63

Query: 62  ESESKIVVKEETEVSSIDFEEEKERKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLG 121
                 ++KEE + +++  EEE      EKSYRGVR+RPWGK+AAEIRDSTR G+RVWLG
Sbjct: 64  ------IIKEEGKEATVAAEEE------EKSYRGVRKRPWGKFAAEIRDSTRKGIRVWLG 123

Query: 122 TFDSAEAAALAYDQAAFSMRGAMAVLNFPVEMVRESLKDIK-YQLEEGCSPVVALKRKHS 181
           TFD+AEAAALAYDQAAF+++G++AVLNFP ++V ESL+ ++   L +G SPV+ALKRKHS
Sbjct: 124 TFDTAEAAALAYDQAAFALKGSLAVLNFPADVVEESLRKMENVNLNDGESPVIALKRKHS 183

Query: 182 MRRK-----------------------SAAAAVKSQGAAEKKK-----MKKNNNVVILED 216
           MR +                       S++++  S  +  +K+      + N  +V+LED
Sbjct: 184 MRNRPRGKKKSSSSSTLTSSPSSSSSYSSSSSSSSLSSRSRKQSVVMTQESNTTLVVLED 240

[Close]

BLAST of Clc07G00940 vs. TAIR 10
Match: AT2G31230.1 (ethylene-responsive element binding factor 15 )

HSP 1 Score: 154.5 bits (389), Expect = 1.0e-37
Identity = 102/236 (43.22%), Postives = 149/236 (63.14%), Query Frame = 0


Query: 11  SDFSTESSFGSAESSFSWSE--FFSIHSTLENSISLHGEFLGNQTSESESKIVVKEETEV 70
           S +S+ SS+ S++ S  W+E  F    S  +     + ++  +  S    ++++KEE + 
Sbjct: 7   SMYSSPSSWSSSQESLLWNESCFLDQSSEPQAFFCPNYDYSDDFFSFESPEMMIKEEIQN 66

Query: 71  SSIDFEEEKERK--TTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAY 130
             +   EE+E+     E+SYRGVR+RPWGK+AAEIRDSTR+G+RVWLGTFD AE AALAY
Sbjct: 67  GDVSNSEEEEKVGIDEERSYRGVRKRPWGKFAAEIRDSTRNGIRVWLGTFDKAEEAALAY 126

Query: 131 DQAAFSMRGAMAVLNFPVEMVRESLKDIK-YQLEEGCSPVVALKRKHSMRRK-------- 190
           DQAAF+ +G++A LNFPVE+VRESLK ++   L +G SPV+ALKRKHS+R +        
Sbjct: 127 DQAAFATKGSLATLNFPVEVVRESLKKMENVNLHDGGSPVMALKRKHSLRNRPRGKKRSS 186

Query: 191 ------------SAAAAVKSQGAAEKKK---MKKNNNVVILEDLGTEYLEELLMLS 219
                       S++++  S   +  K+    +++  +V+ EDLG EYLE+LLM S
Sbjct: 187 SSSSSSSNSSSCSSSSSTSSTSRSSSKQSVVKQESGTLVVFEDLGAEYLEQLLMSS 242

[Close]

BLAST of Clc07G00940 vs. TAIR 10
Match: AT1G04370.1 (Ethylene-responsive element binding factor 14 )

HSP 1 Score: 102.4 bits (254), Expect = 4.6e-22
Identity = 48/60 (80.00%), Postives = 53/60 (88.33%), Query Frame = 0


Query: 86  YRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAYDQAAFSMRGAMAVLNFPVE 145
           YRGVRRRPWGKYAAEIRDS +HG RVWLGTFD+AE AA AYD+AA+SMRG  A+LNFP E
Sbjct: 20  YRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFPHE 79

[Close]

BLAST of Clc07G00940 vs. TAIR 10
Match: AT3G23220.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 101.7 bits (252), Expect = 7.8e-22
Identity = 50/72 (69.44%), Postives = 56/72 (77.78%), Query Frame = 0


Query: 74  EEEKERKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAYDQAAFSM 133
           E  +   T E  YRGVR+RPWGKYAAEIRDS RHG RVWLGTF++AE AA AYD+AAF M
Sbjct: 2   ERIESYNTNEMKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGM 61

Query: 134 RGAMAVLNFPVE 146
           RG  A+LNFP E
Sbjct: 62  RGQRAILNFPHE 73

The following BLAST results are available for this feature:

BLAST of Clc07G00940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447432.1	3.0e-92	88.58	PREDICTED: ethylene-responsive transcription factor 1B-like [Cucumis melo] >KAA0...	[more]
XP_004151982.1	1.4e-89	86.30	ethylene-response factor C3 [Cucumis sativus]	[more]
KAE8650665.1	1.4e-89	86.30	hypothetical protein Csa_011527 [Cucumis sativus]	[more]
XP_038888342.1	1.5e-88	86.76	ethylene-response factor C3-like [Benincasa hispida]	[more]
XP_023534089.1	1.5e-86	85.00	ethylene-responsive transcription factor 1B-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc07G00940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDC8	4.6e-43	53.08	Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
A0A3Q7I5Y9	3.0e-42	54.26	Ethylene-response factor C3 OS=Solanum lycopersicum OX=4081 GN=ERF.C.3 PE=2 SV=1	[more]
Q9LND1	4.9e-37	42.40	Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8VYM0	1.4e-36	43.22	Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
O04681	6.2e-24	73.33	Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicu...	[more]

BLAST of Clc07G00940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T5F2	1.5e-92	88.58	Ethylene-responsive transcription factor 1B-like OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3BHE9	1.5e-92	88.58	ethylene-responsive transcription factor 1B-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A0A0L7G2	6.8e-90	86.30	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G389850 PE=...	[more]
A0A6J1EX16	4.6e-86	84.55	ethylene-responsive transcription factor 1B-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1CY30	1.0e-85	83.71	ethylene-responsive transcription factor 1B-like OS=Momordica charantia OX=3673 ...	[more]

BLAST of Clc07G00940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23240.1	3.3e-44	53.08	ethylene response factor 1	[more]
AT1G06160.1	3.5e-38	42.40	octadecanoid-responsive Arabidopsis AP2/ERF 59	[more]
AT2G31230.1	1.0e-37	43.22	ethylene-responsive element binding factor 15	[more]
AT1G04370.1	4.6e-22	80.00	Ethylene-responsive element binding factor 14	[more]
AT3G23220.1	7.8e-22	69.44	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 86..97 score: 71.67 coord: 109..125 score: 65.88
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 85..149 e-value: 6.7E-36 score: 135.3
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 85..135 e-value: 1.1E-14 score: 54.3
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 85..143 score: 23.037476
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 86..144 e-value: 6.59562E-20 score: 78.0823
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 84..145 e-value: 2.5E-26 score: 93.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR31190:SF132	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B	coord: 45..217
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 45..217
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 85..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G00940.1	Clc07G00940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity