Clc07G00610 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G00610
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	PRA1 family protein
Location	ClcChr07: 626862 .. 627425 (-)
RNA-Seq Expression	Clc07G00610
Synteny	Clc07G00610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTCTGTTCATGACTTCACTGAAACTTCCATTCTATCACGCGCCAGAGCCGCCTCCGATTCCGTTTACGCCACTTTACGGCCATGGCGGGAGCTTCTTCAGCCGTTATCGTCCTTTACACGCCCTTCATCCGTTAGCGAGGCGACCATTCGGTGTAAGCGTAATCTGAAGTACTTTCGTGTTAATTACACTCTCATCGTTCTGCTCATTCTCTTTCTCAGCCTCCTCTGGCACCCTGTTTCATTGATTGTGTTCTTGATCGTGTTCGTTGCGTGGTTCTTCCTTTATTTTTTCCGGGACGAGCCCTTGAAGGTGTTTAATCGTGTTGTTGATGATCGAGTTGTATTGGCTCTGCTTGGATTGGTCACAATTGTCGCTTTGGTGTTGACGGATGTGTCGTTGAATGTATTGATTTCGATTTTGATTGGGGTTTTTCTTGTTTTGATACATGCCGCTTTTAGGGTTACAGATGATTTGTATATTGATGAACAAGAAGTCGCCGATGGAGGATTGCTTTCGGTTGTCGGCAGTCCGACTCGTACAGGGTATAGCCGAGTCTAG

mRNA sequence

ATGTCCTCTGTTCATGACTTCACTGAAACTTCCATTCTATCACGCGCCAGAGCCGCCTCCGATTCCGTTTACGCCACTTTACGGCCATGGCGGGAGCTTCTTCAGCCGTTATCGTCCTTTACACGCCCTTCATCCGTTAGCGAGGCGACCATTCGGTGTAAGCGTAATCTGAAGTACTTTCGTGTTAATTACACTCTCATCGTTCTGCTCATTCTCTTTCTCAGCCTCCTCTGGCACCCTGTTTCATTGATTGTGTTCTTGATCGTGTTCGTTGCGTGGTTCTTCCTTTATTTTTTCCGGGACGAGCCCTTGAAGGTGTTTAATCGTGTTGTTGATGATCGAGTTGTATTGGCTCTGCTTGGATTGGTCACAATTGTCGCTTTGGTGTTGACGGATGTGTCGTTGAATGTATTGATTTCGATTTTGATTGGGGTTTTTCTTGTTTTGATACATGCCGCTTTTAGGGTTACAGATGATTTGTATATTGATGAACAAGAAGTCGCCGATGGAGGATTGCTTTCGGTTGTCGGCAGTCCGACTCGTACAGGGTATAGCCGAGTCTAG

Coding sequence (CDS)

ATGTCCTCTGTTCATGACTTCACTGAAACTTCCATTCTATCACGCGCCAGAGCCGCCTCCGATTCCGTTTACGCCACTTTACGGCCATGGCGGGAGCTTCTTCAGCCGTTATCGTCCTTTACACGCCCTTCATCCGTTAGCGAGGCGACCATTCGGTGTAAGCGTAATCTGAAGTACTTTCGTGTTAATTACACTCTCATCGTTCTGCTCATTCTCTTTCTCAGCCTCCTCTGGCACCCTGTTTCATTGATTGTGTTCTTGATCGTGTTCGTTGCGTGGTTCTTCCTTTATTTTTTCCGGGACGAGCCCTTGAAGGTGTTTAATCGTGTTGTTGATGATCGAGTTGTATTGGCTCTGCTTGGATTGGTCACAATTGTCGCTTTGGTGTTGACGGATGTGTCGTTGAATGTATTGATTTCGATTTTGATTGGGGTTTTTCTTGTTTTGATACATGCCGCTTTTAGGGTTACAGATGATTTGTATATTGATGAACAAGAAGTCGCCGATGGAGGATTGCTTTCGGTTGTCGGCAGTCCGACTCGTACAGGGTATAGCCGAGTCTAG

Protein sequence

MSSVHDFTETSILSRARAASDSVYATLRPWRELLQPLSSFTRPSSVSEATIRCKRNLKYFRVNYTLIVLLILFLSLLWHPVSLIVFLIVFVAWFFLYFFRDEPLKVFNRVVDDRVVLALLGLVTIVALVLTDVSLNVLISILIGVFLVLIHAAFRVTDDLYIDEQEVADGGLLSVVGSPTRTGYSRV

Homology

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BLAST of Clc07G00610 vs. NCBI nr
Match: XP_038887336.1 (PRA1 family protein E-like [Benincasa hispida])

HSP 1 Score: 319.3 bits (817), Expect = 2.2e-83
Identity = 174/185 (94.05%), Postives = 179/185 (96.76%), Query Frame = 0


Query: 3   SVHDFTETSILSRARAASDSVYATLRPWRELLQPLSSFTRPSSVSEATIRCKRNLKYFRV 62
           S + FTETSILSRARAASDSVYATLRPWRELLQPLSSFTRPSS+ EATIRCKRNLKYFRV
Sbjct: 7   SPYGFTETSILSRARAASDSVYATLRPWRELLQPLSSFTRPSSIGEATIRCKRNLKYFRV 66

Query: 63  NYTLIVLLILFLSLLWHPVSLIVFLIVFVAWFFLYFFRDEPLKVFNRVVDDRVVLALLGL 122
           NYT IVLLILF SLLWHPVSLIVFLIVFVAWFFLYFFRDEPL+VFNRVVDDRVVLALLGL
Sbjct: 67  NYTFIVLLILFFSLLWHPVSLIVFLIVFVAWFFLYFFRDEPLEVFNRVVDDRVVLALLGL 126

Query: 123 VTIVALVLTDVSLNVLISILIGVFLVLIHAAFRVTDDLYIDEQEVADGGLLSVVGSPTRT 182
           VTIVALVLTDV LNVL+SILIGVFLVLIHAAFRVTDDLYIDEQEVADGGLLSVVGSPTRT
Sbjct: 127 VTIVALVLTDVLLNVLVSILIGVFLVLIHAAFRVTDDLYIDEQEVADGGLLSVVGSPTRT 186

Query: 183 GYSRV 188
           GYSR+
Sbjct: 187 GYSRI 191

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BLAST of Clc07G00610 vs. NCBI nr
Match: XP_004145378.1 (PRA1 family protein E [Cucumis sativus] >KGN61689.1 hypothetical protein Csa_006382 [Cucumis sativus])

HSP 1 Score: 306.6 bits (784), Expect = 1.5e-79
Identity = 169/185 (91.35%), Postives = 175/185 (94.59%), Query Frame = 0


Query: 3   SVHDFTETSILSRARAASDSVYATLRPWRELLQPLSSFTRPSSVSEATIRCKRNLKYFRV 62
           S + FTETSILSRARAASDS+YATLRPWRELLQPLSSFTRPSSV EA IRCKRNLKYFRV
Sbjct: 7   SPYGFTETSILSRARAASDSLYATLRPWRELLQPLSSFTRPSSVGEAIIRCKRNLKYFRV 66

Query: 63  NYTLIVLLILFLSLLWHPVSLIVFLIVFVAWFFLYFFRDEPLKVFNRVVDDRVVLALLGL 122
           NYT IVLLILFLSLLWHPVSLIVFLIVFVAWFFLYFFRDEPL+VF+RVVDDRVVL LLG+
Sbjct: 67  NYTFIVLLILFLSLLWHPVSLIVFLIVFVAWFFLYFFRDEPLEVFHRVVDDRVVLVLLGI 126

Query: 123 VTIVALVLTDVSLNVLISILIGVFLVLIHAAFRVTDDLYIDEQEVADGGLLSVVGSPTRT 182
           VTI ALVLTDVSLNVLISILIGVFLVLIHA  RVTDDLYIDEQEVADGGLLSVVGSPTRT
Sbjct: 127 VTIFALVLTDVSLNVLISILIGVFLVLIHAGSRVTDDLYIDEQEVADGGLLSVVGSPTRT 186

Query: 183 GYSRV 188
            YSR+
Sbjct: 187 EYSRI 191

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BLAST of Clc07G00610 vs. NCBI nr
Match: XP_008449347.1 (PREDICTED: PRA1 family protein E-like [Cucumis melo] >KAA0057422.1 PRA1 family protein E-like [Cucumis melo var. makuwa] >TYK30121.1 PRA1 family protein E-like [Cucumis melo var. makuwa])

HSP 1 Score: 306.2 bits (783), Expect = 1.9e-79
Identity = 166/183 (90.71%), Postives = 174/183 (95.08%), Query Frame = 0


Query: 5   HDFTETSILSRARAASDSVYATLRPWRELLQPLSSFTRPSSVSEATIRCKRNLKYFRVNY 64
           + FTETSILSRARAASDSVYATLRPWRELLQPLSSFTRPSSV EA IRCKRNLKYFRVNY
Sbjct: 9   YGFTETSILSRARAASDSVYATLRPWRELLQPLSSFTRPSSVGEAIIRCKRNLKYFRVNY 68

Query: 65  TLIVLLILFLSLLWHPVSLIVFLIVFVAWFFLYFFRDEPLKVFNRVVDDRVVLALLGLVT 124
           T IVLLILFLSLLWHPVSLIVFL+VFVAWFFLYFFRDEPL+VFNRVVDDRVVL LLG+VT
Sbjct: 69  TFIVLLILFLSLLWHPVSLIVFLVVFVAWFFLYFFRDEPLEVFNRVVDDRVVLVLLGIVT 128

Query: 125 IVALVLTDVSLNVLISILIGVFLVLIHAAFRVTDDLYIDEQEVADGGLLSVVGSPTRTGY 184
           I ALVLTDVSLNVL+SILIGVFLVL+HA  RV+DDLYIDEQEVADGGLLSVVGSPTRT Y
Sbjct: 129 IFALVLTDVSLNVLVSILIGVFLVLVHAGSRVSDDLYIDEQEVADGGLLSVVGSPTRTEY 188

Query: 185 SRV 188
           SR+
Sbjct: 189 SRI 191

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BLAST of Clc07G00610 vs. NCBI nr
Match: XP_023533638.1 (PRA1 family protein E-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292.4 bits (747), Expect = 2.9e-75
Identity = 163/191 (85.34%), Postives = 175/191 (91.62%), Query Frame = 0


Query: 1   MSSVHD----FTETSILSRARAASDSVYATLRPWRELLQPLSSFTRPSSVSEATIRCKRN 60
           MS+VH     FTETSIL     ASDS YATLRPWRELLQPLSSFTRPSS+ EA+IRCKRN
Sbjct: 1   MSTVHPSPYAFTETSIL-----ASDSAYATLRPWRELLQPLSSFTRPSSLGEASIRCKRN 60

Query: 61  LKYFRVNYTLIVLLILFLSLLWHPVSLIVFLIVFVAWFFLYFFRDEPLKVFNRVVDDRVV 120
           LKYFR NYTL++LLILF SLLWHPVSLIVFLIVFVAWFFLYFFRD+PL++F+RVVDDRVV
Sbjct: 61  LKYFRANYTLVLLLILFFSLLWHPVSLIVFLIVFVAWFFLYFFRDQPLELFHRVVDDRVV 120

Query: 121 LALLGLVTIVALVLTDVSLNVLISILIGVFLVLIHAAFRVTDDLYIDEQEVADGGLLSVV 180
           LA+LGLVTIV LVLTDVSLNVL+SILIGVFLVL HAAFRVT+DLYIDEQEVADGGLLSVV
Sbjct: 121 LAVLGLVTIVVLVLTDVSLNVLLSILIGVFLVLTHAAFRVTEDLYIDEQEVADGGLLSVV 180

Query: 181 GSPTRTGYSRV 188
           GSPTRTGYSRV
Sbjct: 181 GSPTRTGYSRV 186

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BLAST of Clc07G00610 vs. NCBI nr
Match: XP_022145895.1 (PRA1 family protein E-like [Momordica charantia])

HSP 1 Score: 290.0 bits (741), Expect = 1.4e-74
Identity = 158/183 (86.34%), Postives = 170/183 (92.90%), Query Frame = 0


Query: 5   HDFTETSILSRARAASDSVYATLRPWRELLQPLSSFTRPSSVSEATIRCKRNLKYFRVNY 64
           + FTETS LSRA AAS SVY +LRPWR+L QPLSSFTRP+SV EATIR KRNLKYFRVNY
Sbjct: 9   YGFTETSFLSRAGAASGSVYGSLRPWRQLFQPLSSFTRPASVGEATIRSKRNLKYFRVNY 68

Query: 65  TLIVLLILFLSLLWHPVSLIVFLIVFVAWFFLYFFRDEPLKVFNRVVDDRVVLALLGLVT 124
           T IVLLILFLSLLWHPVSLIVFLIVFVAWFFLYF RDEPL+VFNRV+DDRVVLA+LGLVT
Sbjct: 69  TFIVLLILFLSLLWHPVSLIVFLIVFVAWFFLYFSRDEPLEVFNRVLDDRVVLAVLGLVT 128

Query: 125 IVALVLTDVSLNVLISILIGVFLVLIHAAFRVTDDLYIDEQEVADGGLLSVVGSPTRTGY 184
           IVALVLTDVSLNV +SILIGVFLV +HAAFRVT+DLY+DEQEVADGGL+SVVGSPTR GY
Sbjct: 129 IVALVLTDVSLNVFVSILIGVFLVSLHAAFRVTEDLYMDEQEVADGGLISVVGSPTRAGY 188

Query: 185 SRV 188
           SRV
Sbjct: 189 SRV 191

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BLAST of Clc07G00610 vs. ExPASy Swiss-Prot
Match: Q9FRR1 (PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.7e-33
Identity = 83/173 (47.98%), Postives = 118/173 (68.21%), Query Frame = 0


Query: 11  SILSRARAASDSVYATLRPWRELLQPLSSFTRPSSVSEATIRCKRNLKYFRVNYTLIVLL 70
           ++ +RA+  + S+  TLRPWRE+L  LS+ + P    EA    K N+ YFR NY L VL 
Sbjct: 31  TLSARAKQTTQSMITTLRPWREILD-LSALSLPRGYDEAMAHLKHNISYFRGNYALAVLA 90

Query: 71  ILFLSLLWHPVSLIVFLIVFVAWFFLYFFRD--EPLKVFNRVVDDRVVLALLGLVTIVAL 130
           I+FL L++HP+S+I F++VF+ W  LYF RD  + + +  + VDD++VL LL LVT++AL
Sbjct: 91  IVFLGLIYHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLAL 150

Query: 131 VLTDVSLNVLISILIGVFLVLIHAAFRVTDDLYIDEQEVADGGLLSVVGSPTR 182
           V TDV  NVL+S++IG+ +V  H AFR TDDL++DE+    GGL+S  GS  R
Sbjct: 151 VYTDVGENVLVSLIIGLLIVGAHGAFRNTDDLFLDEESARRGGLVS-AGSGNR 201

[Close]

BLAST of Clc07G00610 vs. ExPASy Swiss-Prot
Match: Q9LIC6 (PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.5e-29
Identity = 73/164 (44.51%), Postives = 107/164 (65.24%), Query Frame = 0


Query: 2   SSVHDFTETSILSRARAASDSVYATLRPWRELLQPLSSFTRPSSVSEATIRCKRNLKYFR 61
           S      +   LSRA+    +  AT R WR +     S   P  VS+A  R K NL YFR
Sbjct: 11  SHASPLVDVESLSRAKHRIKAGLATRRAWRVMFD-FHSMGLPHGVSDAFTRIKTNLAYFR 70

Query: 62  VNYTLIVLLILFLSLLWHPVSLIVFLIVFVAWFFLYFFRDEPLKVFNRVVDDRVVLALLG 121
           +NY ++VL+++F SL+WHP SLIVF ++ V W FLYF RDEP+K+F   +DDR VL +L 
Sbjct: 71  MNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQIDDRTVLIVLS 130

Query: 122 LVTIVALVLTDVSLNVLISILIGVFLVLIHAAFRVTDDLYIDEQ 166
           ++T+V L+LT+ + N++ +++ G  LVLIH+  R T+DL++DE+
Sbjct: 131 VLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDEE 173

[Close]

BLAST of Clc07G00610 vs. ExPASy Swiss-Prot
Match: Q9C889 (PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.4e-27
Identity = 83/169 (49.11%), Postives = 105/169 (62.13%), Query Frame = 0


Query: 13  LSRARAASDSVYATLRPWRELLQPLSSFTRPSSVSEATIRCKRNLKYFRVNYTLIVLLIL 72
           +SRA+    S  AT RPW+ +     S T P    +A  R K NL YFR NY + VL IL
Sbjct: 22  ISRAKHRIKSGLATRRPWKSMFD-FESMTLPHGFFDAISRIKTNLGYFRANYAIGVLFIL 81

Query: 73  FLSLLWHPVSLIVFLIVFVAWFFLYFFRDEPLKVFNRVVDDRVVLALLGLVTIVALVLTD 132
           FLSLL+HP SLIV  I+ V W FLYF RDEPL VF   +DDR VL  L ++T+V L+LT 
Sbjct: 82  FLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDDRTVLIGLSVLTVVMLLLTH 141

Query: 133 VSLNVLISILIGVFLVLIHAAFRVTDDLYIDEQEVA---DGGLLSVVGS 179
            + N+L S+L    LVLIHAA R +D+L++DE+  A     GL+S   S
Sbjct: 142 ATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEEAAAVTEASGLMSYPSS 189

[Close]

BLAST of Clc07G00610 vs. ExPASy Swiss-Prot
Match: Q9LIC7 (PRA1 family protein F4 OS=Arabidopsis thaliana OX=3702 GN=PRA1F4 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.0e-27
Identity = 73/153 (47.71%), Postives = 98/153 (64.05%), Query Frame = 0


Query: 13  LSRARAASDSVYATLRPWRELLQPLSSFTRPSSVSEATIRCKRNLKYFRVNYTLIVLLIL 72
           +SRA+       AT R WR +   L S   P  VS+   R K NL YFR NY +++L ++
Sbjct: 22  ISRAKQRIKDGLATRRSWRVMFD-LHSTGLPHGVSDVFSRIKTNLAYFRSNYAIVILNVI 81

Query: 73  FLSLLWHPVSLIVFLIVFVAWFFLYFFRDEPLKVFNRVVDDRVVLALLGLVTIVALVLTD 132
           F SL+WHP SLIVF  +   W FLYF RD PLKVF   +DDR VL  L ++TIV L+LT+
Sbjct: 82  FFSLIWHPTSLIVFTGLVFLWIFLYFLRDVPLKVFRFQIDDRAVLIGLSVITIVLLLLTN 141

Query: 133 VSLNVLISILIGVFLVLIHAAFRVTDDLYIDEQ 166
            + N++ +++ G  LVLIHA  R TDDL++DE+
Sbjct: 142 ATFNIVAALMAGAVLVLIHAVIRKTDDLFLDEE 173

[Close]

BLAST of Clc07G00610 vs. ExPASy Swiss-Prot
Match: Q9SIY7 (PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-26
Identity = 78/174 (44.83%), Postives = 110/174 (63.22%), Query Frame = 0


Query: 11  SILSRARAASDSVYATLRPWRELLQPLSSFTRPSSVSEATIRCKRNLKYFRVNYTLIVLL 70
           + LSR  ++     +  RPW EL+   SSF RP S++++  R ++NL YF+VNY+ IV L
Sbjct: 30  TFLSRLSSSLRESLSQRRPWLELVD-RSSFARPDSLTDSFSRIRKNLAYFKVNYSAIVSL 89

Query: 71  ILFLSLLWHPVSLIVFLIVFVAWFFLYFFR--DEPLKVFNRVVDDRVVLALLGLVTIVAL 130
           +L  SLL HP SL+V L +  +W FLY FR  D+PL +F R   DR  L  L L TIV +
Sbjct: 90  VLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSDQPLVLFGRSFSDRETLLGLVLTTIVVV 149

Query: 131 VLTDVSLNVLISILIGVFLVLIHAAFRVTDDLYIDEQEVADGGLLSVVGSPTRT 183
            +T V   +  ++ IG+ +V +H AFRV DDL++DEQE A+ GLLS +G+   T
Sbjct: 150 FMTSVGSLLTSALTIGIAIVCLHGAFRVPDDLFLDEQEPANAGLLSFIGNSAAT 202

[Close]

BLAST of Clc07G00610 vs. ExPASy TrEMBL
Match: A0A0A0LKV0 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_2G224290 PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 7.1e-80
Identity = 169/185 (91.35%), Postives = 175/185 (94.59%), Query Frame = 0


Query: 3   SVHDFTETSILSRARAASDSVYATLRPWRELLQPLSSFTRPSSVSEATIRCKRNLKYFRV 62
           S + FTETSILSRARAASDS+YATLRPWRELLQPLSSFTRPSSV EA IRCKRNLKYFRV
Sbjct: 7   SPYGFTETSILSRARAASDSLYATLRPWRELLQPLSSFTRPSSVGEAIIRCKRNLKYFRV 66

Query: 63  NYTLIVLLILFLSLLWHPVSLIVFLIVFVAWFFLYFFRDEPLKVFNRVVDDRVVLALLGL 122
           NYT IVLLILFLSLLWHPVSLIVFLIVFVAWFFLYFFRDEPL+VF+RVVDDRVVL LLG+
Sbjct: 67  NYTFIVLLILFLSLLWHPVSLIVFLIVFVAWFFLYFFRDEPLEVFHRVVDDRVVLVLLGI 126

Query: 123 VTIVALVLTDVSLNVLISILIGVFLVLIHAAFRVTDDLYIDEQEVADGGLLSVVGSPTRT 182
           VTI ALVLTDVSLNVLISILIGVFLVLIHA  RVTDDLYIDEQEVADGGLLSVVGSPTRT
Sbjct: 127 VTIFALVLTDVSLNVLISILIGVFLVLIHAGSRVTDDLYIDEQEVADGGLLSVVGSPTRT 186

Query: 183 GYSRV 188
            YSR+
Sbjct: 187 EYSRI 191

[Close]

BLAST of Clc07G00610 vs. ExPASy TrEMBL
Match: A0A5A7UNI5 (PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001030 PE=3 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 9.3e-80
Identity = 166/183 (90.71%), Postives = 174/183 (95.08%), Query Frame = 0


Query: 5   HDFTETSILSRARAASDSVYATLRPWRELLQPLSSFTRPSSVSEATIRCKRNLKYFRVNY 64
           + FTETSILSRARAASDSVYATLRPWRELLQPLSSFTRPSSV EA IRCKRNLKYFRVNY
Sbjct: 9   YGFTETSILSRARAASDSVYATLRPWRELLQPLSSFTRPSSVGEAIIRCKRNLKYFRVNY 68

Query: 65  TLIVLLILFLSLLWHPVSLIVFLIVFVAWFFLYFFRDEPLKVFNRVVDDRVVLALLGLVT 124
           T IVLLILFLSLLWHPVSLIVFL+VFVAWFFLYFFRDEPL+VFNRVVDDRVVL LLG+VT
Sbjct: 69  TFIVLLILFLSLLWHPVSLIVFLVVFVAWFFLYFFRDEPLEVFNRVVDDRVVLVLLGIVT 128

Query: 125 IVALVLTDVSLNVLISILIGVFLVLIHAAFRVTDDLYIDEQEVADGGLLSVVGSPTRTGY 184
           I ALVLTDVSLNVL+SILIGVFLVL+HA  RV+DDLYIDEQEVADGGLLSVVGSPTRT Y
Sbjct: 129 IFALVLTDVSLNVLVSILIGVFLVLVHAGSRVSDDLYIDEQEVADGGLLSVVGSPTRTEY 188

Query: 185 SRV 188
           SR+
Sbjct: 189 SRI 191

[Close]

BLAST of Clc07G00610 vs. ExPASy TrEMBL
Match: A0A1S3BMR2 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103491252 PE=3 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 9.3e-80
Identity = 166/183 (90.71%), Postives = 174/183 (95.08%), Query Frame = 0


Query: 5   HDFTETSILSRARAASDSVYATLRPWRELLQPLSSFTRPSSVSEATIRCKRNLKYFRVNY 64
           + FTETSILSRARAASDSVYATLRPWRELLQPLSSFTRPSSV EA IRCKRNLKYFRVNY
Sbjct: 9   YGFTETSILSRARAASDSVYATLRPWRELLQPLSSFTRPSSVGEAIIRCKRNLKYFRVNY 68

Query: 65  TLIVLLILFLSLLWHPVSLIVFLIVFVAWFFLYFFRDEPLKVFNRVVDDRVVLALLGLVT 124
           T IVLLILFLSLLWHPVSLIVFL+VFVAWFFLYFFRDEPL+VFNRVVDDRVVL LLG+VT
Sbjct: 69  TFIVLLILFLSLLWHPVSLIVFLVVFVAWFFLYFFRDEPLEVFNRVVDDRVVLVLLGIVT 128

Query: 125 IVALVLTDVSLNVLISILIGVFLVLIHAAFRVTDDLYIDEQEVADGGLLSVVGSPTRTGY 184
           I ALVLTDVSLNVL+SILIGVFLVL+HA  RV+DDLYIDEQEVADGGLLSVVGSPTRT Y
Sbjct: 129 IFALVLTDVSLNVLVSILIGVFLVLVHAGSRVSDDLYIDEQEVADGGLLSVVGSPTRTEY 188

Query: 185 SRV 188
           SR+
Sbjct: 189 SRI 191

[Close]

BLAST of Clc07G00610 vs. ExPASy TrEMBL
Match: A0A6J1CVS9 (PRA1 family protein OS=Momordica charantia OX=3673 GN=LOC111015242 PE=3 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 6.9e-75
Identity = 158/183 (86.34%), Postives = 170/183 (92.90%), Query Frame = 0


Query: 5   HDFTETSILSRARAASDSVYATLRPWRELLQPLSSFTRPSSVSEATIRCKRNLKYFRVNY 64
           + FTETS LSRA AAS SVY +LRPWR+L QPLSSFTRP+SV EATIR KRNLKYFRVNY
Sbjct: 9   YGFTETSFLSRAGAASGSVYGSLRPWRQLFQPLSSFTRPASVGEATIRSKRNLKYFRVNY 68

Query: 65  TLIVLLILFLSLLWHPVSLIVFLIVFVAWFFLYFFRDEPLKVFNRVVDDRVVLALLGLVT 124
           T IVLLILFLSLLWHPVSLIVFLIVFVAWFFLYF RDEPL+VFNRV+DDRVVLA+LGLVT
Sbjct: 69  TFIVLLILFLSLLWHPVSLIVFLIVFVAWFFLYFSRDEPLEVFNRVLDDRVVLAVLGLVT 128

Query: 125 IVALVLTDVSLNVLISILIGVFLVLIHAAFRVTDDLYIDEQEVADGGLLSVVGSPTRTGY 184
           IVALVLTDVSLNV +SILIGVFLV +HAAFRVT+DLY+DEQEVADGGL+SVVGSPTR GY
Sbjct: 129 IVALVLTDVSLNVFVSILIGVFLVSLHAAFRVTEDLYMDEQEVADGGLISVVGSPTRAGY 188

Query: 185 SRV 188
           SRV
Sbjct: 189 SRV 191

[Close]

BLAST of Clc07G00610 vs. ExPASy TrEMBL
Match: A0A6J1EWX4 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111437276 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 9.0e-75
Identity = 162/191 (84.82%), Postives = 174/191 (91.10%), Query Frame = 0


Query: 1   MSSVHD----FTETSILSRARAASDSVYATLRPWRELLQPLSSFTRPSSVSEATIRCKRN 60
           MS+VH     FTETSIL+     SDS YATLRPWRELLQPLSSFTRPSS+ EA+IRCKRN
Sbjct: 1   MSTVHPSPYAFTETSILT-----SDSAYATLRPWRELLQPLSSFTRPSSLGEASIRCKRN 60

Query: 61  LKYFRVNYTLIVLLILFLSLLWHPVSLIVFLIVFVAWFFLYFFRDEPLKVFNRVVDDRVV 120
           LKYFR NYTL+VLLILF SLLWHPVSLIVFLIVFVAWFFLYFFRD+PL++F+RVVDDRVV
Sbjct: 61  LKYFRSNYTLVVLLILFFSLLWHPVSLIVFLIVFVAWFFLYFFRDQPLELFHRVVDDRVV 120

Query: 121 LALLGLVTIVALVLTDVSLNVLISILIGVFLVLIHAAFRVTDDLYIDEQEVADGGLLSVV 180
           LA+LGLVTIV LVLTDVS NVL+SILIGVFLVL HAAFRVT+DLYIDEQEVADGGLLSVV
Sbjct: 121 LAVLGLVTIVVLVLTDVSFNVLLSILIGVFLVLTHAAFRVTEDLYIDEQEVADGGLLSVV 180

Query: 181 GSPTRTGYSRV 188
           GSPTRTGYSRV
Sbjct: 181 GSPTRTGYSRV 186

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BLAST of Clc07G00610 vs. TAIR 10
Match: AT1G08770.1 (prenylated RAB acceptor 1.E )

HSP 1 Score: 142.9 bits (359), Expect = 2.6e-34
Identity = 83/173 (47.98%), Postives = 118/173 (68.21%), Query Frame = 0


Query: 11  SILSRARAASDSVYATLRPWRELLQPLSSFTRPSSVSEATIRCKRNLKYFRVNYTLIVLL 70
           ++ +RA+  + S+  TLRPWRE+L  LS+ + P    EA    K N+ YFR NY L VL 
Sbjct: 31  TLSARAKQTTQSMITTLRPWREILD-LSALSLPRGYDEAMAHLKHNISYFRGNYALAVLA 90

Query: 71  ILFLSLLWHPVSLIVFLIVFVAWFFLYFFRD--EPLKVFNRVVDDRVVLALLGLVTIVAL 130
           I+FL L++HP+S+I F++VF+ W  LYF RD  + + +  + VDD++VL LL LVT++AL
Sbjct: 91  IVFLGLIYHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLAL 150

Query: 131 VLTDVSLNVLISILIGVFLVLIHAAFRVTDDLYIDEQEVADGGLLSVVGSPTR 182
           V TDV  NVL+S++IG+ +V  H AFR TDDL++DE+    GGL+S  GS  R
Sbjct: 151 VYTDVGENVLVSLIIGLLIVGAHGAFRNTDDLFLDEESARRGGLVS-AGSGNR 201

[Close]

BLAST of Clc07G00610 vs. TAIR 10
Match: AT3G13720.1 (PRA1 (Prenylated rab acceptor) family protein )

HSP 1 Score: 130.2 bits (326), Expect = 1.8e-30
Identity = 73/164 (44.51%), Postives = 107/164 (65.24%), Query Frame = 0


Query: 2   SSVHDFTETSILSRARAASDSVYATLRPWRELLQPLSSFTRPSSVSEATIRCKRNLKYFR 61
           S      +   LSRA+    +  AT R WR +     S   P  VS+A  R K NL YFR
Sbjct: 11  SHASPLVDVESLSRAKHRIKAGLATRRAWRVMFD-FHSMGLPHGVSDAFTRIKTNLAYFR 70

Query: 62  VNYTLIVLLILFLSLLWHPVSLIVFLIVFVAWFFLYFFRDEPLKVFNRVVDDRVVLALLG 121
           +NY ++VL+++F SL+WHP SLIVF ++ V W FLYF RDEP+K+F   +DDR VL +L 
Sbjct: 71  MNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQIDDRTVLIVLS 130

Query: 122 LVTIVALVLTDVSLNVLISILIGVFLVLIHAAFRVTDDLYIDEQ 166
           ++T+V L+LT+ + N++ +++ G  LVLIH+  R T+DL++DE+
Sbjct: 131 VLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDEE 173

[Close]

BLAST of Clc07G00610 vs. TAIR 10
Match: AT1G55190.1 (PRA1 (Prenylated rab acceptor) family protein )

HSP 1 Score: 124.4 bits (311), Expect = 9.6e-29
Identity = 83/169 (49.11%), Postives = 105/169 (62.13%), Query Frame = 0


Query: 13  LSRARAASDSVYATLRPWRELLQPLSSFTRPSSVSEATIRCKRNLKYFRVNYTLIVLLIL 72
           +SRA+    S  AT RPW+ +     S T P    +A  R K NL YFR NY + VL IL
Sbjct: 22  ISRAKHRIKSGLATRRPWKSMFD-FESMTLPHGFFDAISRIKTNLGYFRANYAIGVLFIL 81

Query: 73  FLSLLWHPVSLIVFLIVFVAWFFLYFFRDEPLKVFNRVVDDRVVLALLGLVTIVALVLTD 132
           FLSLL+HP SLIV  I+ V W FLYF RDEPL VF   +DDR VL  L ++T+V L+LT 
Sbjct: 82  FLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDDRTVLIGLSVLTVVMLLLTH 141

Query: 133 VSLNVLISILIGVFLVLIHAAFRVTDDLYIDEQEVA---DGGLLSVVGS 179
            + N+L S+L    LVLIHAA R +D+L++DE+  A     GL+S   S
Sbjct: 142 ATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEEAAAVTEASGLMSYPSS 189

[Close]

BLAST of Clc07G00610 vs. TAIR 10
Match: AT3G13710.1 (prenylated RAB acceptor 1.F4 )

HSP 1 Score: 123.2 bits (308), Expect = 2.1e-28
Identity = 73/153 (47.71%), Postives = 98/153 (64.05%), Query Frame = 0


Query: 13  LSRARAASDSVYATLRPWRELLQPLSSFTRPSSVSEATIRCKRNLKYFRVNYTLIVLLIL 72
           +SRA+       AT R WR +   L S   P  VS+   R K NL YFR NY +++L ++
Sbjct: 22  ISRAKQRIKDGLATRRSWRVMFD-LHSTGLPHGVSDVFSRIKTNLAYFRSNYAIVILNVI 81

Query: 73  FLSLLWHPVSLIVFLIVFVAWFFLYFFRDEPLKVFNRVVDDRVVLALLGLVTIVALVLTD 132
           F SL+WHP SLIVF  +   W FLYF RD PLKVF   +DDR VL  L ++TIV L+LT+
Sbjct: 82  FFSLIWHPTSLIVFTGLVFLWIFLYFLRDVPLKVFRFQIDDRAVLIGLSVITIVLLLLTN 141

Query: 133 VSLNVLISILIGVFLVLIHAAFRVTDDLYIDEQ 166
            + N++ +++ G  LVLIHA  R TDDL++DE+
Sbjct: 142 ATFNIVAALMAGAVLVLIHAVIRKTDDLFLDEE 173

[Close]

BLAST of Clc07G00610 vs. TAIR 10
Match: AT2G40380.1 (prenylated RAB acceptor 1.B2 )

HSP 1 Score: 121.3 bits (303), Expect = 8.1e-28
Identity = 78/174 (44.83%), Postives = 110/174 (63.22%), Query Frame = 0


Query: 11  SILSRARAASDSVYATLRPWRELLQPLSSFTRPSSVSEATIRCKRNLKYFRVNYTLIVLL 70
           + LSR  ++     +  RPW EL+   SSF RP S++++  R ++NL YF+VNY+ IV L
Sbjct: 30  TFLSRLSSSLRESLSQRRPWLELVD-RSSFARPDSLTDSFSRIRKNLAYFKVNYSAIVSL 89

Query: 71  ILFLSLLWHPVSLIVFLIVFVAWFFLYFFR--DEPLKVFNRVVDDRVVLALLGLVTIVAL 130
           +L  SLL HP SL+V L +  +W FLY FR  D+PL +F R   DR  L  L L TIV +
Sbjct: 90  VLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSDQPLVLFGRSFSDRETLLGLVLTTIVVV 149

Query: 131 VLTDVSLNVLISILIGVFLVLIHAAFRVTDDLYIDEQEVADGGLLSVVGSPTRT 183
            +T V   +  ++ IG+ +V +H AFRV DDL++DEQE A+ GLLS +G+   T
Sbjct: 150 FMTSVGSLLTSALTIGIAIVCLHGAFRVPDDLFLDEQEPANAGLLSFIGNSAAT 202

The following BLAST results are available for this feature:

BLAST of Clc07G00610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887336.1	2.2e-83	94.05	PRA1 family protein E-like [Benincasa hispida]	[more]
XP_004145378.1	1.5e-79	91.35	PRA1 family protein E [Cucumis sativus] >KGN61689.1 hypothetical protein Csa_006...	[more]
XP_008449347.1	1.9e-79	90.71	PREDICTED: PRA1 family protein E-like [Cucumis melo] >KAA0057422.1 PRA1 family p...	[more]
XP_023533638.1	2.9e-75	85.34	PRA1 family protein E-like [Cucurbita pepo subsp. pepo]	[more]
XP_022145895.1	1.4e-74	86.34	PRA1 family protein E-like [Momordica charantia]	[more]

BLAST of Clc07G00610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FRR1	3.7e-33	47.98	PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1	[more]
Q9LIC6	2.5e-29	44.51	PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1	[more]
Q9C889	1.4e-27	49.11	PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1	[more]
Q9LIC7	3.0e-27	47.71	PRA1 family protein F4 OS=Arabidopsis thaliana OX=3702 GN=PRA1F4 PE=2 SV=1	[more]
Q9SIY7	1.1e-26	44.83	PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1	[more]

BLAST of Clc07G00610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKV0	7.1e-80	91.35	PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_2G224290 PE=3 SV=1	[more]
A0A5A7UNI5	9.3e-80	90.71	PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G...	[more]
A0A1S3BMR2	9.3e-80	90.71	PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103491252 PE=3 SV=1	[more]
A0A6J1CVS9	6.9e-75	86.34	PRA1 family protein OS=Momordica charantia OX=3673 GN=LOC111015242 PE=3 SV=1	[more]
A0A6J1EWX4	9.0e-75	84.82	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111437276 PE=3 SV=1	[more]

BLAST of Clc07G00610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08770.1	2.6e-34	47.98	prenylated RAB acceptor 1.E	[more]
AT3G13720.1	1.8e-30	44.51	PRA1 (Prenylated rab acceptor) family protein	[more]
AT1G55190.1	9.6e-29	49.11	PRA1 (Prenylated rab acceptor) family protein	[more]
AT3G13710.1	2.1e-28	47.71	prenylated RAB acceptor 1.F4	[more]
AT2G40380.1	8.1e-28	44.83	prenylated RAB acceptor 1.B2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 24..164 e-value: 2.2E-48 score: 163.5
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 7..186
None	No IPR available	PANTHER	PTHR19317:SF13	PRA1 FAMILY PROTEIN	coord: 7..186

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G00610.1	Clc07G00610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane