Clc07G00185 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G00185
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	outer envelope membrane protein 7-like
Location	ClcChr07: 234614 .. 236573 (-)
RNA-Seq Expression	Clc07G00185
Synteny	Clc07G00185

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGTAGTAGGTATTAGAATGATAAAGGTTACGGACAAACAAAATGTTAATATTGGTGAAGCTATGGAGGATAAACAGAGAAGAAGGAATCTCACGGATAACAATGGTGAAACCAAGAGGATGAAGAGGAAGACAGAGAGAGTGGAGGGAGCGACGCTGATGTTAGTAGCTGTACGTGCAGCTCAAGTATTTTTCACCATTCTCTTCTTTCTTTATTTTTATGCAAACAAAACACAATTCACCTTTTAATCCTAAACTTCACCATTCTATCCATTTTCACCCTGAATTTTCTATTTTATTAAATTCCACCTCAAACTCAAACTTTAATCTTGCATTTTAATTAGAGACAAGTTTTTATTATTCTCTATATCATAGAATAGCATAATAATAATTAGAGACTAAGTTTTTCCTTAAACATATTTGGAACCATAATTTATTAGATGGCTACAATTGCAACATTTTTTTAAATTTAGGTATAAAAATGCAACACTGATCTAAAATTAAAGGTACAATTTGATAGAATTGATATTACAAAATTATGGGTTAAAATAGGGAGTTGTACGGATGACCCAAAATGAAATATGTCCTATCAATTGAAACTAAACCTTTTTTTAACCTTTTGTTTATGTCATATTAGGATAGAATTACCAAAACAAACCATTTTGCACGTGGCTCCTCTCACTCCCAATCTACAATCTCTCACATTCTGGCTCTCTCGCTCTTTTTCGAGGAAAACTCACAAATCCAACACTCAAAACTCATGTCCCTCGCTCTCATTCCGATGCCACTTTTTGGAGAAAAATCACAGATCTATTGATGGAAATTTTGATCAACCTAACAAAACCACGTTCTAGTAAAAAACCCATACATCCAATGCTTCGATGATCTCTAAAATCTCTTTCCGACAAATCCACAACCTCTTTGGTGAACACACGATTGTTGACCACAAATGCTAACAACAATTGGAAAAAAAAAGTAGAGAAAGAAGAAAATTGAAAAGAGAAAGAGGTAAAAAAAAGATCAAAGATATTTCGGTAATGTTGATTGATGATAAGGCAAGCAAAAGGATGAAATTTTAAGCTTAAAAAAGTGGGCCAAATACCTTCATGGGCTTGTCTACTACCCGCTTTTCTGATTTGATCTCACTCTCCAAGTTGACCTGCGTAAAGAGTTACTTGGTAAAGGGCAGAGCATACAATGCCTAATTAGTTAGTAGAGTGAAGGTCAAACTTTCTTTGGAGATTACTTCTACCTTTGAAGGTTGTCAAATAAAACTGTTTATAATATTTTTCTTCTAATATTTGGTAGTTACATGTAACACTAGCCATGTCAAAATAGTTGCAGTTTGGTTATTTTTCAACTGGTCAACTAGAAACATGAGGCTTTTGACTTTTTTTTTTTTTTTCCCTTCTTTGAGACTCAGCTTTTCCTCGTGCCTTAGGCTTGCCATGCTCGGGGCAACAGTTATTATTATTATTATTATTATTTTTTAATTAAAAAACTTATATTTTCTTAGCATATTTTGATTGTGGGTCTCCATAACAATCTACGTTGTTCGATAAGGGTGATTCTTTCCTTTGTTGGTTGAAGGAAGAGGTTGGACTAATTGACCTCGGTTTCCTGGTTTGATTTGGCGCTTTCTATCTAATATTTTCTTCGTCGCTAAGGTAAGGAGGACAGATCAATAAGAGCTCTCAGTCTCACCTGGCCGGAGCCGCCACAGCAGGAAGTAAGACCAATGGGAAAGAAACCGTCTGGGACAAAGCAAGCATTTTTCGTCTTCGGAGCCTTGGCATTTGGTTGGCTCGCCATTGAGATGGCTTTCAAGCCCTTCCTCGATAAGGCCCGCTCCGCCATGGACAACTCTGATCCGGCTCGGGATCCCGACGATCTTGTCGATAACCAATCTGATCAGACCCCATCTGATGACGATCAAACTACCACTGGCACTGCTTAA

mRNA sequence

ATGTTGGTAGTAGGTATTAGAATGATAAAGGTTACGGACAAACAAAATGTTAATATTGGTGAAGCTATGGAGGATAAACAGAGAAGAAGGAATCTCACGGATAACAATGGTGAAACCAAGAGGATGAAGAGGAAGACAGAGAGAGTGGAGGGAGCGACGCTGATGTTAGTAGCTGTACGTGCAGCTCAAGAGGACAGATCAATAAGAGCTCTCAGTCTCACCTGGCCGGAGCCGCCACAGCAGGAAGTAAGACCAATGGGAAAGAAACCGTCTGGGACAAAGCAAGCATTTTTCGTCTTCGGAGCCTTGGCATTTGGTTGGCTCGCCATTGAGATGGCTTTCAAGCCCTTCCTCGATAAGGCCCGCTCCGCCATGGACAACTCTGATCCGGCTCGGGATCCCGACGATCTTGTCGATAACCAATCTGATCAGACCCCATCTGATGACGATCAAACTACCACTGGCACTGCTTAA

Coding sequence (CDS)

ATGTTGGTAGTAGGTATTAGAATGATAAAGGTTACGGACAAACAAAATGTTAATATTGGTGAAGCTATGGAGGATAAACAGAGAAGAAGGAATCTCACGGATAACAATGGTGAAACCAAGAGGATGAAGAGGAAGACAGAGAGAGTGGAGGGAGCGACGCTGATGTTAGTAGCTGTACGTGCAGCTCAAGAGGACAGATCAATAAGAGCTCTCAGTCTCACCTGGCCGGAGCCGCCACAGCAGGAAGTAAGACCAATGGGAAAGAAACCGTCTGGGACAAAGCAAGCATTTTTCGTCTTCGGAGCCTTGGCATTTGGTTGGCTCGCCATTGAGATGGCTTTCAAGCCCTTCCTCGATAAGGCCCGCTCCGCCATGGACAACTCTGATCCGGCTCGGGATCCCGACGATCTTGTCGATAACCAATCTGATCAGACCCCATCTGATGACGATCAAACTACCACTGGCACTGCTTAA

Protein sequence

MLVVGIRMIKVTDKQNVNIGEAMEDKQRRRNLTDNNGETKRMKRKTERVEGATLMLVAVRAAQEDRSIRALSLTWPEPPQQEVRPMGKKPSGTKQAFFVFGALAFGWLAIEMAFKPFLDKARSAMDNSDPARDPDDLVDNQSDQTPSDDDQTTTGTA

Homology

[Close]

BLAST of Clc07G00185 vs. NCBI nr
Match: XP_038888886.1 (outer envelope membrane protein 7-like [Benincasa hispida] >XP_038888887.1 outer envelope membrane protein 7-like [Benincasa hispida] >XP_038888888.1 outer envelope membrane protein 7-like [Benincasa hispida] >XP_038888889.1 outer envelope membrane protein 7-like [Benincasa hispida])

HSP 1 Score: 132.5 bits (332), Expect = 3.2e-27
Identity = 67/72 (93.06%), Postives = 70/72 (97.22%), Query Frame = 0


Query: 86  MGKKPSGTKQAFFVFGALAFGWLAIEMAFKPFLDKARSAMDNSDPARDPDDLVDNQSDQT 145
           MGKKPSGTKQAFFVFGALA GWLAIEMAFKPFLDKARSAMDNSDPA+DPDDLVDNQSDQ+
Sbjct: 1   MGKKPSGTKQAFFVFGALALGWLAIEMAFKPFLDKARSAMDNSDPAQDPDDLVDNQSDQS 60

Query: 146 PSDDDQTTTGTA 158
           PSDDDQ+TT TA
Sbjct: 61  PSDDDQSTTATA 72

[Close]

BLAST of Clc07G00185 vs. NCBI nr
Match: XP_022155586.1 (outer envelope membrane protein 7-like [Momordica charantia])

HSP 1 Score: 116.3 bits (290), Expect = 2.4e-22
Identity = 59/69 (85.51%), Postives = 62/69 (89.86%), Query Frame = 0


Query: 86  MGKKPSGTKQAFFVFGALAFGWLAIEMAFKPFLDKARSAMDNSDPARDPDDLVDNQSDQT 145
           MGKKPSGTKQAF +FGALA GWLAIEMAFKPFLDKARSAMD SDP RDPDDLVDN SD  
Sbjct: 1   MGKKPSGTKQAFVLFGALALGWLAIEMAFKPFLDKARSAMDKSDPTRDPDDLVDNLSDHR 60

Query: 146 PSDDDQTTT 155
           PSDDD++TT
Sbjct: 61  PSDDDESTT 69

[Close]

BLAST of Clc07G00185 vs. NCBI nr
Match: XP_023553591.1 (outer envelope membrane protein 7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 114.0 bits (284), Expect = 1.2e-21
Identity = 57/69 (82.61%), Postives = 62/69 (89.86%), Query Frame = 0


Query: 86  MGKKPSGTKQAFFVFGALAFGWLAIEMAFKPFLDKARSAMDNSDPARDPDDLVDNQSDQT 145
           MGKKPSG+KQAFF+ GALA GWLAIEMAFKPFLDKARSAMDNSDP RDPDDL+D QSD  
Sbjct: 1   MGKKPSGSKQAFFILGALALGWLAIEMAFKPFLDKARSAMDNSDPTRDPDDLLDKQSDHL 60

Query: 146 PSDDDQTTT 155
            SDDD++TT
Sbjct: 61  QSDDDRSTT 69

[Close]

BLAST of Clc07G00185 vs. NCBI nr
Match: KAA0057297.1 (6.7 kDa chloroplast outer envelope membrane protein [Cucumis melo var. makuwa] >TYK13436.1 6.7 kDa chloroplast outer envelope membrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 114.0 bits (284), Expect = 1.2e-21
Identity = 59/72 (81.94%), Postives = 63/72 (87.50%), Query Frame = 0


Query: 86  MGKKPSGTKQAFFVFGALAFGWLAIEMAFKPFLDKARSAMDNSDPARDPDDLVDNQSDQT 145
           M K+PSGT QAFFVF ALA GWLAIEMAFKPFLDKARSAMD SDPARDPD+LVDNQSD T
Sbjct: 1   MSKRPSGTTQAFFVFSALAMGWLAIEMAFKPFLDKARSAMDKSDPARDPDELVDNQSDHT 60

Query: 146 PSDDDQTTTGTA 158
            SDDDQ+T  T+
Sbjct: 61  SSDDDQSTIVTS 72

[Close]

BLAST of Clc07G00185 vs. NCBI nr
Match: XP_022963695.1 (outer envelope membrane protein 7-like [Cucurbita moschata] >XP_022963696.1 outer envelope membrane protein 7-like [Cucurbita moschata] >XP_022963697.1 outer envelope membrane protein 7-like [Cucurbita moschata] >KAG7011240.1 Outer envelope membrane protein 7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 111.7 bits (278), Expect = 5.8e-21
Identity = 56/69 (81.16%), Postives = 61/69 (88.41%), Query Frame = 0


Query: 86  MGKKPSGTKQAFFVFGALAFGWLAIEMAFKPFLDKARSAMDNSDPARDPDDLVDNQSDQT 145
           MGKKPSG+KQAFF+ GALA GWLAIEMAFKPFLDKARSAMDNSDP RDPDD +D QSD  
Sbjct: 1   MGKKPSGSKQAFFILGALALGWLAIEMAFKPFLDKARSAMDNSDPTRDPDDRLDKQSDHL 60

Query: 146 PSDDDQTTT 155
            SDDD++TT
Sbjct: 61  QSDDDRSTT 69

[Close]

BLAST of Clc07G00185 vs. ExPASy Swiss-Prot
Match: Q9SVC4 (Outer envelope membrane protein 7 OS=Arabidopsis thaliana OX=3702 GN=OEP7 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 8.2e-10
Identity = 36/61 (59.02%), Postives = 43/61 (70.49%), Query Frame = 0


Query: 89  KPSGTKQAFFVFGALAFGWLAIEMAFKPFLDKARSAMDNSDPARDPDDLVDNQSDQTPSD 148
           K SG KQA  V  A+A GWLAIE+AFKPFLDK RS++D SDP +DPDD  D  +  T S 
Sbjct: 3   KTSGAKQATVVVAAMALGWLAIEIAFKPFLDKFRSSIDKSDPTKDPDDF-DTAATATTSK 62

Query: 149 D 150
           +
Sbjct: 63  E 62

[Close]

BLAST of Clc07G00185 vs. ExPASy TrEMBL
Match: A0A6J1DS29 (outer envelope membrane protein 7-like OS=Momordica charantia OX=3673 GN=LOC111022685 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.1e-22
Identity = 59/69 (85.51%), Postives = 62/69 (89.86%), Query Frame = 0


Query: 86  MGKKPSGTKQAFFVFGALAFGWLAIEMAFKPFLDKARSAMDNSDPARDPDDLVDNQSDQT 145
           MGKKPSGTKQAF +FGALA GWLAIEMAFKPFLDKARSAMD SDP RDPDDLVDN SD  
Sbjct: 1   MGKKPSGTKQAFVLFGALALGWLAIEMAFKPFLDKARSAMDKSDPTRDPDDLVDNLSDHR 60

Query: 146 PSDDDQTTT 155
           PSDDD++TT
Sbjct: 61  PSDDDESTT 69

[Close]

BLAST of Clc07G00185 vs. ExPASy TrEMBL
Match: A0A5A7URM9 (6.7 kDa chloroplast outer envelope membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00570 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 5.7e-22
Identity = 59/72 (81.94%), Postives = 63/72 (87.50%), Query Frame = 0


Query: 86  MGKKPSGTKQAFFVFGALAFGWLAIEMAFKPFLDKARSAMDNSDPARDPDDLVDNQSDQT 145
           M K+PSGT QAFFVF ALA GWLAIEMAFKPFLDKARSAMD SDPARDPD+LVDNQSD T
Sbjct: 1   MSKRPSGTTQAFFVFSALAMGWLAIEMAFKPFLDKARSAMDKSDPARDPDELVDNQSDHT 60

Query: 146 PSDDDQTTTGTA 158
            SDDDQ+T  T+
Sbjct: 61  SSDDDQSTIVTS 72

[Close]

BLAST of Clc07G00185 vs. ExPASy TrEMBL
Match: A0A6J1HGS4 (outer envelope membrane protein 7-like OS=Cucurbita moschata OX=3662 GN=LOC111463949 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.8e-21
Identity = 56/69 (81.16%), Postives = 61/69 (88.41%), Query Frame = 0


Query: 86  MGKKPSGTKQAFFVFGALAFGWLAIEMAFKPFLDKARSAMDNSDPARDPDDLVDNQSDQT 145
           MGKKPSG+KQAFF+ GALA GWLAIEMAFKPFLDKARSAMDNSDP RDPDD +D QSD  
Sbjct: 1   MGKKPSGSKQAFFILGALALGWLAIEMAFKPFLDKARSAMDNSDPTRDPDDRLDKQSDHL 60

Query: 146 PSDDDQTTT 155
            SDDD++TT
Sbjct: 61  QSDDDRSTT 69

[Close]

BLAST of Clc07G00185 vs. ExPASy TrEMBL
Match: A0A6J1HUQ5 (outer envelope membrane protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111467002 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 4.8e-21
Identity = 55/68 (80.88%), Postives = 61/68 (89.71%), Query Frame = 0


Query: 86  MGKKPSGTKQAFFVFGALAFGWLAIEMAFKPFLDKARSAMDNSDPARDPDDLVDNQSDQT 145
           MGKKPSG+KQAFF+ GALA GWLAIE+AFKPFLDKARSAMDNSDP RDPDDL+D QSD  
Sbjct: 1   MGKKPSGSKQAFFILGALALGWLAIEIAFKPFLDKARSAMDNSDPTRDPDDLLDKQSDHL 60

Query: 146 PSDDDQTT 154
            SDDD++T
Sbjct: 61  QSDDDRST 68

[Close]

BLAST of Clc07G00185 vs. ExPASy TrEMBL
Match: A0A0A0KJE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G409970 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 2.1e-16
Identity = 53/72 (73.61%), Postives = 57/72 (79.17%), Query Frame = 0


Query: 86  MGKKPSGTKQAFFVFGALAFGWLAIEMAFKPFLDKARSAMDNSDPARDPDDLVDNQSDQT 145
           M  K S TKQAFFVFGALA GWLAIEMAFKP L KARSAMD SDPARDPD+L+D+    T
Sbjct: 1   MTNKSSETKQAFFVFGALAMGWLAIEMAFKPLLGKARSAMDKSDPARDPDELLDH----T 60

Query: 146 PSDDDQTTTGTA 158
            SDDD+  TGTA
Sbjct: 61  SSDDDRNATGTA 68

[Close]

BLAST of Clc07G00185 vs. TAIR 10
Match: AT3G52420.1 (outer envelope membrane protein 7 )

HSP 1 Score: 65.1 bits (157), Expect = 5.8e-11
Identity = 36/61 (59.02%), Postives = 43/61 (70.49%), Query Frame = 0


Query: 89  KPSGTKQAFFVFGALAFGWLAIEMAFKPFLDKARSAMDNSDPARDPDDLVDNQSDQTPSD 148
           K SG KQA  V  A+A GWLAIE+AFKPFLDK RS++D SDP +DPDD  D  +  T S 
Sbjct: 3   KTSGAKQATVVVAAMALGWLAIEIAFKPFLDKFRSSIDKSDPTKDPDDF-DTAATATTSK 62

Query: 149 D 150
           +
Sbjct: 63  E 62

[Close]

BLAST of Clc07G00185 vs. TAIR 10
Match: AT3G63160.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast outer membrane, thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: outer envelope membrane protein 7 (TAIR:AT3G52420.1); Has 26 Blast hits to 26 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 1.6e-05
Identity = 25/46 (54.35%), Postives = 29/46 (63.04%), Query Frame = 0


Query: 85  PMGKKPSGTKQ-AFFVFGALAFGWLAIEMAFKPFLDKARSAMDNSD 130
           P  +KP+G KQ A  V G LA GWLAIE+ FKP   K  S+ D SD
Sbjct: 12  PKLEKPTGKKQTATVVVGVLAVGWLAIELVFKPLFKKLSSSKDKSD 57

The following BLAST results are available for this feature:

BLAST of Clc07G00185 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888886.1	3.2e-27	93.06	outer envelope membrane protein 7-like [Benincasa hispida] >XP_038888887.1 outer...	[more]
XP_022155586.1	2.4e-22	85.51	outer envelope membrane protein 7-like [Momordica charantia]	[more]
XP_023553591.1	1.2e-21	82.61	outer envelope membrane protein 7-like [Cucurbita pepo subsp. pepo]	[more]
KAA0057297.1	1.2e-21	81.94	6.7 kDa chloroplast outer envelope membrane protein [Cucumis melo var. makuwa] >...	[more]
XP_022963695.1	5.8e-21	81.16	outer envelope membrane protein 7-like [Cucurbita moschata] >XP_022963696.1 oute...	[more]

BLAST of Clc07G00185 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVC4	8.2e-10	59.02	Outer envelope membrane protein 7 OS=Arabidopsis thaliana OX=3702 GN=OEP7 PE=1 S...	[more]

BLAST of Clc07G00185 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DS29	1.1e-22	85.51	outer envelope membrane protein 7-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A5A7URM9	5.7e-22	81.94	6.7 kDa chloroplast outer envelope membrane protein OS=Cucumis melo var. makuwa ...	[more]
A0A6J1HGS4	2.8e-21	81.16	outer envelope membrane protein 7-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1HUQ5	4.8e-21	80.88	outer envelope membrane protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC1114670...	[more]
A0A0A0KJE9	2.1e-16	73.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G409970 PE=4 SV=1	[more]

BLAST of Clc07G00185 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52420.1	5.8e-11	59.02	outer envelope membrane protein 7	[more]
AT3G63160.1	1.6e-05	54.35	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..157
None	No IPR available	PANTHER	PTHR33982:SF5	OUTER ENVELOPE MEMBRANE PROTEIN 7	coord: 89..148
IPR038944	Outer envelope membrane protein 7-like	PANTHER	PTHR33982	OUTER ENVELOPE MEMBRANE PROTEIN 7-RELATED	coord: 89..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G00185.1	Clc07G00185.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0031359	integral component of chloroplast outer membrane