Clc06G19090 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G19090
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	EF hand calcium-binding family protein
Location	ClcChr06: 29344155 .. 29344583 (+)
RNA-Seq Expression	Clc06G19090
Synteny	Clc06G19090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATCATCAACAGCGCAGCACAGTACGATCGTGTATTGAGTTACTTCGACGAAGATGGAGACGGCAAGATTTCGCCGTCGGAGCTGATAAATCGGGTAGGATTGATCGGCGGAGAGCTGCTGCAGGCGGAGGCTGAGGCGGCGGTGGAATCGCTTGACTCCGACGGCGATGGATTGCTGTGCGCCGGTGATTTCGAACGGCTACTGGAGGTTGGGGAGGAAGAGAAATTGAAGGATTTGAAAGAGGCGTTTGCTCTGTACGATACCGAAGGTTGTGGGTTCATAACTCCGAAGAGTTTGAAGAAAATGCTAAGAAAATTGGGGGAAATCAAATCAACTGAGGATTGTAAATTGATGATTCGTCGCTTCGATTTGAACGGCGACGGTTTGATTAGCTTTGAGGAGTTTCAGATCATGATGGCTTAA

mRNA sequence

ATGGAGATCATCAACAGCGCAGCACAGTACGATCGTGTATTGAGTTACTTCGACGAAGATGGAGACGGCAAGATTTCGCCGTCGGAGCTGATAAATCGGGTAGGATTGATCGGCGGAGAGCTGCTGCAGGCGGAGGCTGAGGCGGCGGTGGAATCGCTTGACTCCGACGGCGATGGATTGCTGTGCGCCGGTGATTTCGAACGGCTACTGGAGGTTGGGGAGGAAGAGAAATTGAAGGATTTGAAAGAGGCGTTTGCTCTGTACGATACCGAAGGTTGTGGGTTCATAACTCCGAAGAGTTTGAAGAAAATGCTAAGAAAATTGGGGGAAATCAAATCAACTGAGGATTGTAAATTGATGATTCGTCGCTTCGATTTGAACGGCGACGGTTTGATTAGCTTTGAGGAGTTTCAGATCATGATGGCTTAA

Coding sequence (CDS)

ATGGAGATCATCAACAGCGCAGCACAGTACGATCGTGTATTGAGTTACTTCGACGAAGATGGAGACGGCAAGATTTCGCCGTCGGAGCTGATAAATCGGGTAGGATTGATCGGCGGAGAGCTGCTGCAGGCGGAGGCTGAGGCGGCGGTGGAATCGCTTGACTCCGACGGCGATGGATTGCTGTGCGCCGGTGATTTCGAACGGCTACTGGAGGTTGGGGAGGAAGAGAAATTGAAGGATTTGAAAGAGGCGTTTGCTCTGTACGATACCGAAGGTTGTGGGTTCATAACTCCGAAGAGTTTGAAGAAAATGCTAAGAAAATTGGGGGAAATCAAATCAACTGAGGATTGTAAATTGATGATTCGTCGCTTCGATTTGAACGGCGACGGTTTGATTAGCTTTGAGGAGTTTCAGATCATGATGGCTTAA

Protein sequence

MEIINSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRKLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMMA

Homology

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BLAST of Clc06G19090 vs. NCBI nr
Match: XP_038879778.1 (putative calcium-binding protein CML19 [Benincasa hispida])

HSP 1 Score: 261.5 bits (667), Expect = 4.1e-66
Identity = 131/139 (94.24%), Postives = 135/139 (97.12%), Query Frame = 0


Query: 4   INSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCA 63
           IN AAQYDRVLSYFDEDGDGKISPSEL NR+GL+GGELLQAEAEAAVESLDSDGDGLLCA
Sbjct: 34  INCAAQYDRVLSYFDEDGDGKISPSELRNRLGLMGGELLQAEAEAAVESLDSDGDGLLCA 93

Query: 64  GDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRKLGEIKSTEDCKLMIRR 123
           GDFERLLEVGEEEKLKDLKEAFALYD EGCGFITPK+LKKMLRKLGE KSTE+CKLMIRR
Sbjct: 94  GDFERLLEVGEEEKLKDLKEAFALYDCEGCGFITPKNLKKMLRKLGERKSTEECKLMIRR 153

Query: 124 FDLNGDGLISFEEFQIMMA 143
           FDLNGDGLISFEEFQIMMA
Sbjct: 154 FDLNGDGLISFEEFQIMMA 172

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BLAST of Clc06G19090 vs. NCBI nr
Match: XP_008464450.1 (PREDICTED: putative calcium-binding protein CML19 [Cucumis melo] >KAA0057778.1 putative calcium-binding protein CML19 [Cucumis melo var. makuwa] >TYJ98459.1 putative calcium-binding protein CML19 [Cucumis melo var. makuwa])

HSP 1 Score: 261.2 bits (666), Expect = 5.4e-66
Identity = 131/142 (92.25%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 1   MEIINSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGL 60
           MEI  S AQYDRVLSYFDEDGDGKISPSEL NR+GLIGGELLQAEAEAAVESLDSDGDGL
Sbjct: 1   MEINKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELLQAEAEAAVESLDSDGDGL 60

Query: 61  LCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRKLGEIKSTEDCKLM 120
           LCAGD ERLLEVGEEEKLKDLKEAFALYD+EGCGFITPK+LKKMLRKLGE KSTE+CK+M
Sbjct: 61  LCAGDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM 120

Query: 121 IRRFDLNGDGLISFEEFQIMMA 143
           IRRFDLNGDGLISFEEFQIMMA
Sbjct: 121 IRRFDLNGDGLISFEEFQIMMA 142

[Close]

BLAST of Clc06G19090 vs. NCBI nr
Match: XP_004138054.1 (putative calcium-binding protein CML19 [Cucumis sativus])

HSP 1 Score: 259.6 bits (662), Expect = 1.6e-65
Identity = 129/142 (90.85%), Postives = 135/142 (95.07%), Query Frame = 0


Query: 1   MEIINSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGL 60
           MEI+ S AQYDRVLSYFDEDGDGKISPSEL NR+GLIGGEL QAEAEAAVESLDSDGDGL
Sbjct: 1   MEIVKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGL 60

Query: 61  LCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRKLGEIKSTEDCKLM 120
           LC GD ERLLEVGEEEKLKDLKEAFALYD+EGCGFITPK+LKKMLRKLGE KSTE+CK+M
Sbjct: 61  LCVGDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM 120

Query: 121 IRRFDLNGDGLISFEEFQIMMA 143
           IRRFDLNGDGLISFEEFQIMMA
Sbjct: 121 IRRFDLNGDGLISFEEFQIMMA 142

[Close]

BLAST of Clc06G19090 vs. NCBI nr
Match: KAE8652382.1 (hypothetical protein Csa_014061 [Cucumis sativus])

HSP 1 Score: 258.5 bits (659), Expect = 3.5e-65
Identity = 128/142 (90.14%), Postives = 135/142 (95.07%), Query Frame = 0


Query: 1   MEIINSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGL 60
           +EI+ S AQYDRVLSYFDEDGDGKISPSEL NR+GLIGGEL QAEAEAAVESLDSDGDGL
Sbjct: 51  LEIVKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGL 110

Query: 61  LCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRKLGEIKSTEDCKLM 120
           LC GD ERLLEVGEEEKLKDLKEAFALYD+EGCGFITPK+LKKMLRKLGE KSTE+CK+M
Sbjct: 111 LCVGDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM 170

Query: 121 IRRFDLNGDGLISFEEFQIMMA 143
           IRRFDLNGDGLISFEEFQIMMA
Sbjct: 171 IRRFDLNGDGLISFEEFQIMMA 192

[Close]

BLAST of Clc06G19090 vs. NCBI nr
Match: KAG7023071.1 (putative calcium-binding protein CML19, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 245.7 bits (626), Expect = 2.3e-61
Identity = 123/139 (88.49%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 4   INSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCA 63
           INS+AQY RVLSYFDEDGDGKISPSEL NRVGL+GGELL  EAE AVESLDSDGDGLLCA
Sbjct: 24  INSSAQYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVESLDSDGDGLLCA 83

Query: 64  GDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRKLGEIKSTEDCKLMIRR 123
           GDFERLL+VGEEEKLKDLKEAF LYD EGCGFITPKSLK+MLRKLGE KST +CKLMI +
Sbjct: 84  GDFERLLDVGEEEKLKDLKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQ 143

Query: 124 FDLNGDGLISFEEFQIMMA 143
           FDLNGDGLISFEEFQIMMA
Sbjct: 144 FDLNGDGLISFEEFQIMMA 162

[Close]

BLAST of Clc06G19090 vs. ExPASy Swiss-Prot
Match: Q8RYJ8 (Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica OX=39947 GN=CML19 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 8.4e-30
Identity = 74/144 (51.39%), Postives = 99/144 (68.75%), Query Frame = 0


Query: 3   IINSAAQYDRVLSYFDEDGDGKISPSEL-INRVGLIGGELLQAEAEAAVESLDSDGDGLL 62
           ++ + A++ RV S FD D DGKIS +EL +     +G ++   EAEA V S D+D DGLL
Sbjct: 1   MVAATAEFRRVFSAFDRDADGKISAAELRLCMKAALGEDMSAEEAEALVSSADTDDDGLL 60

Query: 63  CAGDFERL---LEVG-EEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRKLGEIKSTEDC 122
              +F +L   LE+G EEE+ + L EAF +Y+ EG G ITP SLK+ML KLG  +  E+C
Sbjct: 61  DEEEFTKLAVQLEMGDEEERCRGLMEAFRMYEMEGEGRITPASLKRMLSKLGSHQGIEEC 120

Query: 123 KLMIRRFDLNGDGLISFEEFQIMM 142
           + MI RFDL+GDG+ISFEEF+IMM
Sbjct: 121 QTMICRFDLDGDGVISFEEFKIMM 144

[Close]

BLAST of Clc06G19090 vs. ExPASy Swiss-Prot
Match: Q9SRE6 (Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 4.2e-29
Identity = 68/134 (50.75%), Postives = 92/134 (68.66%), Query Frame = 0


Query: 9   QYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFER 68
           + + V SY D + DG+ISP EL      +G +L   EA AAV   D+DGDG+L   +F +
Sbjct: 43  ELEAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQ 102

Query: 69  LLEV-GEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRKLGEIKSTEDCKLMIRRFDLN 128
           L++V  EEEK  +LK AF LY  EG   ITP+SLK ML+KLGE ++T+DC++MI  FDLN
Sbjct: 103 LIKVDDEEEKKMELKGAFRLYIAEGEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLN 162

Query: 129 GDGLISFEEFQIMM 142
            DG++SF+EF +MM
Sbjct: 163 ADGVLSFDEFALMM 176

[Close]

BLAST of Clc06G19090 vs. ExPASy Swiss-Prot
Match: Q8RYK0 (Probable calcium-binding protein CML31 OS=Oryza sativa subsp. japonica OX=39947 GN=CML31 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-28
Identity = 67/142 (47.18%), Postives = 95/142 (66.90%), Query Frame = 0


Query: 6   SAAQYDRVLSYFDEDGDGKISPSEL-INRVGLIGGELLQAEAEAAVESLDSDGDGLLCAG 65
           S  +   + + FD DGDG+IS +EL +     +G E+   EA   V S+D+DGDGLLC  
Sbjct: 8   SPCESSALFATFDHDGDGRISAAELRLCMKTTLGEEVSDEEAGQLVASVDADGDGLLCEA 67

Query: 66  DFERLLEVGEEEKLKD-----LKEAFALYDTEGCGFITPKSLKKMLRKLGEIKSTEDCKL 125
           +F RL++  E E+  +     L+EAF +Y+ EG G ITP SL++MLR+LG  +  +DC+ 
Sbjct: 68  EFVRLVQAAEVEEEDERRGTGLREAFGMYEMEGEGCITPTSLRRMLRRLGSDQDIDDCRA 127

Query: 126 MIRRFDLNGDGLISFEEFQIMM 142
           MI RFDLNGDG++SF+EF+IMM
Sbjct: 128 MICRFDLNGDGVLSFDEFKIMM 149

[Close]

BLAST of Clc06G19090 vs. ExPASy Swiss-Prot
Match: Q9SRE7 (Calcium-binding protein CML39 OS=Arabidopsis thaliana OX=3702 GN=CML39 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.5e-26
Identity = 64/135 (47.41%), Postives = 88/135 (65.19%), Query Frame = 0


Query: 11  DRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLL 70
           + V +Y D + DG+IS  EL      +G ++   EAEAAV+  D DGDG+L   +F  L+
Sbjct: 24  EAVFAYMDANRDGRISAEELKKSFKTLGEQMSDEEAEAAVKLSDIDGDGMLDINEFALLI 83

Query: 71  ----EVGEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRKLGEIKSTEDCKLMIRRFDL 130
               E  EEEK + + EAF +Y  +G   ITP SLK ML KLGE ++T+DCK+MI+ FDL
Sbjct: 84  KGNDEFTEEEKKRKIMEAFRMYIADGEDCITPGSLKMMLMKLGESRTTDDCKVMIQAFDL 143

Query: 131 NGDGLISFEEFQIMM 142
           N DG++SF+EF +MM
Sbjct: 144 NADGVLSFDEFALMM 158

[Close]

BLAST of Clc06G19090 vs. ExPASy Swiss-Prot
Match: Q9FIH9 (Calcium-binding protein CML37 OS=Arabidopsis thaliana OX=3702 GN=CML37 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 8.1e-25
Identity = 62/132 (46.97%), Postives = 85/132 (64.39%), Query Frame = 0


Query: 13  VLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLE- 72
           V  Y D + DGKIS  EL + V L+GG L   E E  V++ D DGDG +   +F +L+E 
Sbjct: 53  VFDYMDANSDGKISGEELQSCVSLLGGALSSREVEEVVKTSDVDGDGFIDFEEFLKLMEG 112

Query: 73  --VGEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRKLGEIKSTEDCKLMIRRFDLNGD 132
               +EE+ K+LKEAF +Y  EG  FIT  SL++ L +LGE  + + CK+MIR FD N D
Sbjct: 113 EDGSDEERRKELKEAFGMYVMEGEEFITAASLRRTLSRLGESCTVDACKVMIRGFDQNDD 172

Query: 133 GLISFEEFQIMM 142
           G++SF+EF +MM
Sbjct: 173 GVLSFDEFVLMM 184

[Close]

BLAST of Clc06G19090 vs. ExPASy TrEMBL
Match: A0A5A7URJ2 (Putative calcium-binding protein CML19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00610 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.6e-66
Identity = 131/142 (92.25%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 1   MEIINSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGL 60
           MEI  S AQYDRVLSYFDEDGDGKISPSEL NR+GLIGGELLQAEAEAAVESLDSDGDGL
Sbjct: 1   MEINKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELLQAEAEAAVESLDSDGDGL 60

Query: 61  LCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRKLGEIKSTEDCKLM 120
           LCAGD ERLLEVGEEEKLKDLKEAFALYD+EGCGFITPK+LKKMLRKLGE KSTE+CK+M
Sbjct: 61  LCAGDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM 120

Query: 121 IRRFDLNGDGLISFEEFQIMMA 143
           IRRFDLNGDGLISFEEFQIMMA
Sbjct: 121 IRRFDLNGDGLISFEEFQIMMA 142

[Close]

BLAST of Clc06G19090 vs. ExPASy TrEMBL
Match: A0A1S3CN12 (putative calcium-binding protein CML19 OS=Cucumis melo OX=3656 GN=LOC103502330 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.6e-66
Identity = 131/142 (92.25%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 1   MEIINSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGL 60
           MEI  S AQYDRVLSYFDEDGDGKISPSEL NR+GLIGGELLQAEAEAAVESLDSDGDGL
Sbjct: 1   MEINKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELLQAEAEAAVESLDSDGDGL 60

Query: 61  LCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRKLGEIKSTEDCKLM 120
           LCAGD ERLLEVGEEEKLKDLKEAFALYD+EGCGFITPK+LKKMLRKLGE KSTE+CK+M
Sbjct: 61  LCAGDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM 120

Query: 121 IRRFDLNGDGLISFEEFQIMMA 143
           IRRFDLNGDGLISFEEFQIMMA
Sbjct: 121 IRRFDLNGDGLISFEEFQIMMA 142

[Close]

BLAST of Clc06G19090 vs. ExPASy TrEMBL
Match: A0A0A0LU40 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002110 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 7.6e-66
Identity = 129/142 (90.85%), Postives = 135/142 (95.07%), Query Frame = 0


Query: 1   MEIINSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGL 60
           MEI+ S AQYDRVLSYFDEDGDGKISPSEL NR+GLIGGEL QAEAEAAVESLDSDGDGL
Sbjct: 1   MEIVKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGL 60

Query: 61  LCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRKLGEIKSTEDCKLM 120
           LC GD ERLLEVGEEEKLKDLKEAFALYD+EGCGFITPK+LKKMLRKLGE KSTE+CK+M
Sbjct: 61  LCVGDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM 120

Query: 121 IRRFDLNGDGLISFEEFQIMMA 143
           IRRFDLNGDGLISFEEFQIMMA
Sbjct: 121 IRRFDLNGDGLISFEEFQIMMA 142

[Close]

BLAST of Clc06G19090 vs. ExPASy TrEMBL
Match: A0A6J1EJM6 (putative calcium-binding protein CML19 OS=Cucurbita moschata OX=3662 GN=LOC111433200 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.9e-61
Identity = 121/139 (87.05%), Postives = 128/139 (92.09%), Query Frame = 0


Query: 4   INSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCA 63
           I SAA YDRVL YFDEDGDGKISPSEL NR+GLIGGELL AEAEAAVESLDSDGDGLLC 
Sbjct: 3   ITSAAHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEAAVESLDSDGDGLLCV 62

Query: 64  GDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRKLGEIKSTEDCKLMIRR 123
           GD ERLL+VGEEEKLKDL+EAF LYD EGCGFITPKSLK+ML+KLGE KST +CK+MIRR
Sbjct: 63  GDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRR 122

Query: 124 FDLNGDGLISFEEFQIMMA 143
           FDLNGDGLISFEEFQIMMA
Sbjct: 123 FDLNGDGLISFEEFQIMMA 141

[Close]

BLAST of Clc06G19090 vs. ExPASy TrEMBL
Match: A0A6J1E2E7 (putative calcium-binding protein CML19 OS=Cucurbita moschata OX=3662 GN=LOC111429954 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.5e-61
Identity = 122/139 (87.77%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 4   INSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCA 63
           IN++AQY RVLSYFDEDGDGKISPSEL NRVGL+GGELL  EAE AVESLDSDGDGLLCA
Sbjct: 27  INNSAQYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVESLDSDGDGLLCA 86

Query: 64  GDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRKLGEIKSTEDCKLMIRR 123
           GDFERLL+VGEEEKLKDLKEAF LYD EGCGFITPKSLK+MLRKLGE KST +CKLMI +
Sbjct: 87  GDFERLLDVGEEEKLKDLKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQ 146

Query: 124 FDLNGDGLISFEEFQIMMA 143
           FDLNGDGLISFEEFQIMMA
Sbjct: 147 FDLNGDGLISFEEFQIMMA 165

[Close]

BLAST of Clc06G19090 vs. TAIR 10
Match: AT1G76650.1 (calmodulin-like 38 )

HSP 1 Score: 129.0 bits (323), Expect = 3.0e-30
Identity = 68/134 (50.75%), Postives = 92/134 (68.66%), Query Frame = 0


Query: 9   QYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFER 68
           + + V SY D + DG+ISP EL      +G +L   EA AAV   D+DGDG+L   +F +
Sbjct: 43  ELEAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQ 102

Query: 69  LLEV-GEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRKLGEIKSTEDCKLMIRRFDLN 128
           L++V  EEEK  +LK AF LY  EG   ITP+SLK ML+KLGE ++T+DC++MI  FDLN
Sbjct: 103 LIKVDDEEEKKMELKGAFRLYIAEGEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLN 162

Query: 129 GDGLISFEEFQIMM 142
            DG++SF+EF +MM
Sbjct: 163 ADGVLSFDEFALMM 176

[Close]

BLAST of Clc06G19090 vs. TAIR 10
Match: AT1G76650.3 (calmodulin-like 38 )

HSP 1 Score: 129.0 bits (323), Expect = 3.0e-30
Identity = 68/134 (50.75%), Postives = 92/134 (68.66%), Query Frame = 0


Query: 9   QYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFER 68
           + + V SY D + DG+ISP EL      +G +L   EA AAV   D+DGDG+L   +F +
Sbjct: 43  ELEAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQ 102

Query: 69  LLEV-GEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRKLGEIKSTEDCKLMIRRFDLN 128
           L++V  EEEK  +LK AF LY  EG   ITP+SLK ML+KLGE ++T+DC++MI  FDLN
Sbjct: 103 LIKVDDEEEKKMELKGAFRLYIAEGEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLN 162

Query: 129 GDGLISFEEFQIMM 142
            DG++SF+EF +MM
Sbjct: 163 ADGVLSFDEFALMM 176

[Close]

BLAST of Clc06G19090 vs. TAIR 10
Match: AT1G76640.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 120.6 bits (301), Expect = 1.1e-27
Identity = 64/135 (47.41%), Postives = 88/135 (65.19%), Query Frame = 0


Query: 11  DRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLL 70
           + V +Y D + DG+IS  EL      +G ++   EAEAAV+  D DGDG+L   +F  L+
Sbjct: 24  EAVFAYMDANRDGRISAEELKKSFKTLGEQMSDEEAEAAVKLSDIDGDGMLDINEFALLI 83

Query: 71  ----EVGEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRKLGEIKSTEDCKLMIRRFDL 130
               E  EEEK + + EAF +Y  +G   ITP SLK ML KLGE ++T+DCK+MI+ FDL
Sbjct: 84  KGNDEFTEEEKKRKIMEAFRMYIADGEDCITPGSLKMMLMKLGESRTTDDCKVMIQAFDL 143

Query: 131 NGDGLISFEEFQIMM 142
           N DG++SF+EF +MM
Sbjct: 144 NADGVLSFDEFALMM 158

[Close]

BLAST of Clc06G19090 vs. TAIR 10
Match: AT1G76650.2 (calmodulin-like 38 )

HSP 1 Score: 118.2 bits (295), Expect = 5.2e-27
Identity = 64/134 (47.76%), Postives = 88/134 (65.67%), Query Frame = 0


Query: 9   QYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFER 68
           + + V SY D + DG+ISP EL      +G +LL           D+DGDG+L   +F +
Sbjct: 43  ELEAVFSYMDANRDGRISPEELQKSFMTLGEQLLS----------DTDGDGMLDFEEFSQ 102

Query: 69  LLEV-GEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRKLGEIKSTEDCKLMIRRFDLN 128
           L++V  EEEK  +LK AF LY  EG   ITP+SLK ML+KLGE ++T+DC++MI  FDLN
Sbjct: 103 LIKVDDEEEKKMELKGAFRLYIAEGEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLN 162

Query: 129 GDGLISFEEFQIMM 142
            DG++SF+EF +MM
Sbjct: 163 ADGVLSFDEFALMM 166

[Close]

BLAST of Clc06G19090 vs. TAIR 10
Match: AT5G42380.1 (calmodulin like 37 )

HSP 1 Score: 114.8 bits (286), Expect = 5.8e-26
Identity = 62/132 (46.97%), Postives = 85/132 (64.39%), Query Frame = 0


Query: 13  VLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLE- 72
           V  Y D + DGKIS  EL + V L+GG L   E E  V++ D DGDG +   +F +L+E 
Sbjct: 53  VFDYMDANSDGKISGEELQSCVSLLGGALSSREVEEVVKTSDVDGDGFIDFEEFLKLMEG 112

Query: 73  --VGEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRKLGEIKSTEDCKLMIRRFDLNGD 132
               +EE+ K+LKEAF +Y  EG  FIT  SL++ L +LGE  + + CK+MIR FD N D
Sbjct: 113 EDGSDEERRKELKEAFGMYVMEGEEFITAASLRRTLSRLGESCTVDACKVMIRGFDQNDD 172

Query: 133 GLISFEEFQIMM 142
           G++SF+EF +MM
Sbjct: 173 GVLSFDEFVLMM 184

The following BLAST results are available for this feature:

BLAST of Clc06G19090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879778.1	4.1e-66	94.24	putative calcium-binding protein CML19 [Benincasa hispida]	[more]
XP_008464450.1	5.4e-66	92.25	PREDICTED: putative calcium-binding protein CML19 [Cucumis melo] >KAA0057778.1 p...	[more]
XP_004138054.1	1.6e-65	90.85	putative calcium-binding protein CML19 [Cucumis sativus]	[more]
KAE8652382.1	3.5e-65	90.14	hypothetical protein Csa_014061 [Cucumis sativus]	[more]
KAG7023071.1	2.3e-61	88.49	putative calcium-binding protein CML19, partial [Cucurbita argyrosperma subsp. a...	[more]

BLAST of Clc06G19090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RYJ8	8.4e-30	51.39	Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9SRE6	4.2e-29	50.75	Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=1 SV=1	[more]
Q8RYK0	1.2e-28	47.18	Probable calcium-binding protein CML31 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9SRE7	1.5e-26	47.41	Calcium-binding protein CML39 OS=Arabidopsis thaliana OX=3702 GN=CML39 PE=2 SV=1	[more]
Q9FIH9	8.1e-25	46.97	Calcium-binding protein CML37 OS=Arabidopsis thaliana OX=3702 GN=CML37 PE=1 SV=1	[more]

BLAST of Clc06G19090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7URJ2	2.6e-66	92.25	Putative calcium-binding protein CML19 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3CN12	2.6e-66	92.25	putative calcium-binding protein CML19 OS=Cucumis melo OX=3656 GN=LOC103502330 P...	[more]
A0A0A0LU40	7.6e-66	90.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002110 PE=4 SV=1	[more]
A0A6J1EJM6	1.9e-61	87.05	putative calcium-binding protein CML19 OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1E2E7	2.5e-61	87.77	putative calcium-binding protein CML19 OS=Cucurbita moschata OX=3662 GN=LOC11142...	[more]

BLAST of Clc06G19090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76650.1	3.0e-30	50.75	calmodulin-like 38	[more]
AT1G76650.3	3.0e-30	50.75	calmodulin-like 38	[more]
AT1G76640.1	1.1e-27	47.41	Calcium-binding EF-hand family protein	[more]
AT1G76650.2	5.2e-27	47.76	calmodulin-like 38	[more]
AT5G42380.1	5.8e-26	46.97	calmodulin like 37	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 9..37 e-value: 0.27 score: 20.3 coord: 45..73 e-value: 45.0 score: 4.4 coord: 116..142 e-value: 0.81 score: 18.5 coord: 80..108 e-value: 0.014 score: 24.6
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 79..141 e-value: 3.7E-14 score: 52.9
IPR002048	EF-hand domain	PFAM	PF13202	EF-hand_5	coord: 13..31 e-value: 5.5E-5 score: 22.5
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 5..40 score: 11.528597
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 112..142 score: 14.290241
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 76..111 score: 12.644413
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 80..142 e-value: 2.21866E-15 score: 64.1061
None	No IPR available	GENE3D	1.10.238.10		coord: 72..142 e-value: 4.3E-22 score: 80.1
None	No IPR available	GENE3D	1.10.238.10		coord: 5..71 e-value: 6.4E-10 score: 41.2
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 6..142
None	No IPR available	PANTHER	PTHR10891:SF870	EF HAND CALCIUM-BINDING FAMILY PROTEIN	coord: 6..142
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 125..137
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 18..30
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 12..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G19090.1	Clc06G19090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding