Clc06G18600 (gene) Watermelon (cordophanus) v2

Overview
NameClc06G18600
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionDEAD-box ATP-dependent RNA helicase 20-like
LocationClcChr06: 29003765 .. 29008370 (-)
RNA-Seq ExpressionClc06G18600
SyntenyClc06G18600
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTTCTCTAAACATGGACCCTTCTTCTTCCTCTTCTTGCCTGTAGATCTTGAATACTTCGAACCGGAATAGTAAGAAATTCTGAAGGCTACGGCCGGTCGGGTATCTTCCGTTTCAAATTCCACCACTGAACTAGACTACTCCGTTTCTTCCACTTTCGAAATCCTAGAGTCATGAATCCTTATGACCATAGATACGCCGATCCCAATTCCTACCGCGAGCGCCGAAGGTAATGTTCGTACTTTGAAGCTCTCCTTCTTATCCTTGATTTCTCTATGGTGTTTCTGATCTCTCTACCCTTTTCTGGGTGACTTTTGATATTTCTTGCGCAGTGACCTAGTGGGTTTACAGCCTGCTGCGCCACCGCCAATAGTAGGGCGTGAATCCTTGTACAAAGGCTATCAACCTCCTCCAGTTCCATACTATGGCCGAGAAAGAGGAGGCGGAGGTGCTTTACCTAATGCCGGAGGCTTCAATGCCTTCCCACGATTTCAACCTCCCGCAGGACCGTTTAATGTCGGCCGCGGTGGCAGCGGTTTCGGTAGCAGCGGTGGTGGGAGGAGGATGTTTGATTCGGGGAGGGGCGGTAGAAGGACTGGTGGGAATATTGGTTCTGGAGGTGGACGTGGTGGAGGAACGGGATTTGACGGCCGTGGTGGTGGAAGAGGGGCTGGACGTGGTGGTGGTTCTTCAAGAGGGGATTTAGATAACATAGTCCTTCCGAGTCAGAATTTTGGGAATTTGGTCCCTTTTGAAAAGAATTTCTACACTGAGTGTCCTTCTGTGCGTGCAATGACGGAGTCTGAAGTTAAGATTTACAGAGAGAGGCATGATATTAGGGTGGAAGGATACGATGTCCCAAGACCAATTCGGAGTTTTCAGGAGGCGAATTTTCCTGGTATTTTACATATCCCATGAATTGAATGAATTTGTATTTATGTTCCGTTCCAGTATTCAAGAAACTTGCCGACTGATTGTTCTTTATTTCGTCTGTTAGCTTACTGCCTTGATGTAATTGCGAAATTGGGATTTGTTGAGCCAACTCCAATTCAGGCTCAAGGATGGCCGATGGCCTTGAAAGGAAGAGATTTGATTGGCATTGCTGAGACTGGCTCCGGGAAGACTCTGGCCTATCTACTGCCAGCTTTAATACACATTAGTGCCCAGCCTCGTTTATGTTAGCGTTATATTACAGATTTTCAGCCTTAATTTCTTTTTGTTGCCACTCTTCTTTCGACCATTAACATTGTGATAATTTGTTCTCCATCTTCATTCATCCAGCACACGGTGAAGGTCCTATTGTGTTGGTGCTAGCACCCACCAGAGAATTAGCTGTTCAAATTCAACAAGAGGCTACTAAATTCGGGTTGCGTGCTAATATTAGAAGTACTTGCGTTTATGGTGGGGCTCCGAAGGGCCCTCAAATTCGTGATCTCAAAAATGGTAATTGTGTTCACTGAACTATTTTTGACTCTGTTTGTGGTTGGTTACTTGCAGTAATTTAGCAACTTCATTGTCTCTTAGGTGTTGAGATTGTTATTGCTACACCTGGACGGCTCATAGATATGCTGGAAGCTGGTCACACAAACCTGCGGCGAGTGACTTACCTTGTTTTAGATGAAGCAGATAGAATGCTGGACATGGGATTTGAGCCTCAAATAAGGACAATCGTTAGCCAAGTATGATATTCCACCCCACTTCCTTCCCCTATACATTGATAATGAATTGCATTTGGAGACTTACAATTAGTGTTATTTCTGGCTCTAGTTGGAGCGTTTAACAAACATTGCAGTTTGATGGTGCTTGTGGAAAATTTTCCATTTATTATAATGCAGTGTTCAGTCCTCACATTATTCTGAATGTAGAACTGAAACATGTTCTCTTAAGAGCTCTTTAAATAAAGATCTGTTTATTATCATGTAGTACTCAGTTCTCAACTCTGTCTAAGAGCGTTTTTCTCTTTACAGATCCGACCTGATAGGCAGACATTATATTGGAGTGCCACATGGCCAAGGGAGGTTGAGAAATTGGCTAGACAATTTTTACGCAATGCATATAAGGTTAAGTTGGAAATTCCTTTTTGTCAATTATCACTCTGTTTCCATATCCCCTGTAGTTGTTATAGAAACATTTATTGACATTTAAATGCTGTGTTGTATCAGGTGATTATTGGTTCACCAGATCTTAAAGCTAACCAGTCTATAAACCAAGTCGTTGAAGTTTTGCCAGAGGCTGAGAAATATAGAAGGTCTGTTAAAAGTTTGTGGCATTCTACAACACGTGTGAACACATAGACAGTGATATTCTCTTCCTATTTTTACATTTAGCATATTTTTCTCATGCAGGTTAATAAAATTGCTCGTTGAAGTGATGGATGGTAGTCGTATTCTGATTTTTGTGGAAACAAAAAAGGGATGTGATAAAGTAACGAGGCAATTGAGAATGGATGGATGGCCAGCTCTATCCATTCATGGCGATAAAAAGCAGGCTGAAAGGGACTTGGTCTTGTCAGAATTTAAGAGTGGAAGAAATCCCATAATGACAGCCACGGATGTGGCTGCAAGAGGGCTTGGTAGGATTACTACATGTCAGGTGTCTTAGGTTTTAATCTAAGTCCCGTTTGATAACGATTTTGTTTTTAGTTAACTTATACATGTTTCGTCCAATTTTCTTAGTTCTTACAATAAATATTTGAGTTCTTAGTAAAATTCCAAAAACAAAAACAAGATTTTAAAAGTCTATTATTTTTAGTTTTCAAGACTTGACATGGTTTTTGAAAACATCGGCAGAAAGTATAAATAGAAGTAGTGTTTATAAGCTTGCTTTTCAAGAATCCTTTGGTGTTTGTTTTCATGTTCTAATGAGTCGGCCAGCTGCTTTCCAGTTCCTGAATATAATTTGTGGCTTGGGTGCAGAGGAAAGTTCTATTGTGCAATGTGCAGTGCATGATGATTGTGATACTGCTTGGTTTCATCTCCCATTTGAAACTGCATATGCTTTTGGTTTTCTTTTTCTGGACTAAAGAGATCCTTTTGCTTCCCAACACTGTGCCCTAGGTTTCGTTTACATGCTACTTCTTTTGGGCTTCCCTTTTTTGCTTCCTTTGGGGTAGTGGTGTCGGTCATATGGTGAAGGAAGAAGGTTTGGTTTAAAGGAAACAGAACCACCCCCTTTTCTTACTGGCTGCTAGTAAATTATTAAATTATGGCATGAATGTCATATTGACACAAAGTTGATGTTATTTTGAGGTTTATCAATGATTTTATTCCAGGTTAAAGGGGAGGGAAATCCTATTCTATTTATGAATACTAAGGATTTGTAAATCCCATGCATCAATGGGTCGGTAAAGGATTATGAGAAAGCAGAGACTTTGATGAGAGTGCTTAGAAGGATTATTTCCTTAAGGTGCCTGAGATAGTTACTTTGGTTCTCTATAGTTATTCGAGCATTATATTGGTACCCATCCACAATTATGGAGCTGGTTGTTTTTGCAGCCTGGTTGACTCATTCATTATTGCATTGTTGGTATCGAAGTCGTCGTGGTGACAGCTGCTACTTATCCCTGTAAAGTTAAGGTGGGCACATTTATTTAGTAATGAATGTGTTATCTTACTTTTGGTCACCAGATCTTACGAGTGCAGGGATAAGGTTTTTTGCAGTTTTATCCATGCTCCCATGTTGCATGTCTTATTTTTATCTAACTTTCACCATCTGTTGTAGATGTGAAAGATATAAAATGTGTGATCAACTATGATTTCCCATCAAGCCTCGAGGACTACGTACACAGGATAGGCCGAACAGGTCGTGCTGGTGCAAAGGGAACTGCATTCACATTCTTTACTCATGAGAATGCGAAACACGCCAGAGATCTTATAAAGATACTCCGAGAAGCAGGGCAGATTGTCACCCCTGCATTGTCTGCTTTAGCCTCGTATAGTGGCTTTGGAGGTAACATTTCTCCTAATCCTCAAGATATGGGTATAGTATTTCTTGGATGCTTACAATTTTAAAAGTATTGTTTTTTTGGGTGTAGGTTCTGGCACTAAATTCCGCCCTCAAGGACACAGAGGCAGCTTTGGTAATCGATCAATGGTTTCGGGATCAAATGCAATCCCTCTTGGTTTGACGTCAAGGCCTCACTAGTTTCACGCAACTCAGAAGGAAGCTAGATAAGTAATGTTTTTGAGAAATGTGGACCATTTTCATTATGTAATATAGTTGACTTAATTCTAGAATAGCAACTTAGTGTTGTTTGGCATGAAAAATGGACATGTCCATATCTGTACATAAAACCAGAATTCTGGTAGACATTGTTGCCATTGTTAGGATTAGGTTTGGTGGTTGTAGGGTTGGTGAAGGTGATGGAAAAAGGATGCTTATGACATATGAATCCTAGATATCTCTCGATGAAACAATATATGTGATCTAAAAGGATGTAAGATCGTGATTTTGTTGTGGTGGGGAAAGAAAGAAAACTGTGGCTTTGAAGGAACGTGATTGTCAATTTACTTTTTGATTGGATATTTTCTTTATTGTTAATTGAAGTTCGTGATTTGATTTTGATTAAGCTTGCGTAACGTTTGATTCAAGTGATAATGGTGACGAG

mRNA sequence

CTCTTCTCTAAACATGGACCCTTCTTCTTCCTCTTCTTGCCTGTAGATCTTGAATACTTCGAACCGGAATAGTAAGAAATTCTGAAGGCTACGGCCGGTCGGGTATCTTCCGTTTCAAATTCCACCACTGAACTAGACTACTCCGTTTCTTCCACTTTCGAAATCCTAGAGTCATGAATCCTTATGACCATAGATACGCCGATCCCAATTCCTACCGCGAGCGCCGAAGTGACCTAGTGGGTTTACAGCCTGCTGCGCCACCGCCAATAGTAGGGCGTGAATCCTTGTACAAAGGCTATCAACCTCCTCCAGTTCCATACTATGGCCGAGAAAGAGGAGGCGGAGGTGCTTTACCTAATGCCGGAGGCTTCAATGCCTTCCCACGATTTCAACCTCCCGCAGGACCGTTTAATGTCGGCCGCGGTGGCAGCGGTTTCGGTAGCAGCGGTGGTGGGAGGAGGATGTTTGATTCGGGGAGGGGCGGTAGAAGGACTGGTGGGAATATTGGTTCTGGAGGTGGACGTGGTGGAGGAACGGGATTTGACGGCCGTGGTGGTGGAAGAGGGGCTGGACGTGGTGGTGGTTCTTCAAGAGGGGATTTAGATAACATAGTCCTTCCGAGTCAGAATTTTGGGAATTTGGTCCCTTTTGAAAAGAATTTCTACACTGAGTGTCCTTCTGTGCGTGCAATGACGGAGTCTGAAGTTAAGATTTACAGAGAGAGGCATGATATTAGGGTGGAAGGATACGATGTCCCAAGACCAATTCGGAGTTTTCAGGAGGCGAATTTTCCTGCTTACTGCCTTGATGTAATTGCGAAATTGGGATTTGTTGAGCCAACTCCAATTCAGGCTCAAGGATGGCCGATGGCCTTGAAAGGAAGAGATTTGATTGGCATTGCTGAGACTGGCTCCGGGAAGACTCTGGCCTATCTACTGCCAGCTTTAATACACATTAGTGCCCAGCCTCGTTTATCACACGGTGAAGGTCCTATTGTGTTGGTGCTAGCACCCACCAGAGAATTAGCTGTTCAAATTCAACAAGAGGCTACTAAATTCGGGTTGCGTGCTAATATTAGAAGTACTTGCGTTTATGGTGGGGCTCCGAAGGGCCCTCAAATTCGTGATCTCAAAAATGGTGTTGAGATTGTTATTGCTACACCTGGACGGCTCATAGATATGCTGGAAGCTGGTCACACAAACCTGCGGCGAGTGACTTACCTTGTTTTAGATGAAGCAGATAGAATGCTGGACATGGGATTTGAGCCTCAAATAAGGACAATCGTTAGCCAAATCCGACCTGATAGGCAGACATTATATTGGAGTGCCACATGGCCAAGGGAGGTTGAGAAATTGGCTAGACAATTTTTACGCAATGCATATAAGGTGATTATTGGTTCACCAGATCTTAAAGCTAACCAGTCTATAAACCAAGTCGTTGAAGTTTTGCCAGAGGCTGAGAAATATAGAAGGTTAATAAAATTGCTCGTTGAAGTGATGGATGGTAGTCGTATTCTGATTTTTGTGGAAACAAAAAAGGGATGTGATAAAGTAACGAGGCAATTGAGAATGGATGGATGGCCAGCTCTATCCATTCATGGCGATAAAAAGCAGGCTGAAAGGGACTTGGTCTTGTCAGAATTTAAGAGTGGAAGAAATCCCATAATGACAGCCACGGATGTGGCTGCAAGAGGGCTTGATGTGAAAGATATAAAATGTGTGATCAACTATGATTTCCCATCAAGCCTCGAGGACTACGTACACAGGATAGGCCGAACAGGTCGTGCTGGTGCAAAGGGAACTGCATTCACATTCTTTACTCATGAGAATGCGAAACACGCCAGAGATCTTATAAAGATACTCCGAGAAGCAGGGCAGATTGTCACCCCTGCATTGTCTGCTTTAGCCTCGTATAGTGGCTTTGGAGGTTCTGGCACTAAATTCCGCCCTCAAGGACACAGAGGCAGCTTTGGTAATCGATCAATGGTTTCGGGATCAAATGCAATCCCTCTTGGTTTGACGTCAAGGCCTCACTAGTTTCACGCAACTCAGAAGGAAGCTAGATAAGTAATGTTTTTGAGAAATGTGGACCATTTTCATTATGTAATATAGTTGACTTAATTCTAGAATAGCAACTTAGTGTTGTTTGGCATGAAAAATGGACATGTCCATATCTGTACATAAAACCAGAATTCTGGTAGACATTGTTGCCATTGTTAGGATTAGGTTTGGTGGTTGTAGGGTTGGTGAAGGTGATGGAAAAAGGATGCTTATGACATATGAATCCTAGATATCTCTCGATGAAACAATATATGTGATCTAAAAGGATGTAAGATCGTGATTTTGTTGTGGTGGGGAAAGAAAGAAAACTGTGGCTTTGAAGGAACGTGATTGTCAATTTACTTTTTGATTGGATATTTTCTTTATTGTTAATTGAAGTTCGTGATTTGATTTTGATTAAGCTTGCGTAACGTTTGATTCAAGTGATAATGGTGACGAG

Coding sequence (CDS)

ATGAATCCTTATGACCATAGATACGCCGATCCCAATTCCTACCGCGAGCGCCGAAGTGACCTAGTGGGTTTACAGCCTGCTGCGCCACCGCCAATAGTAGGGCGTGAATCCTTGTACAAAGGCTATCAACCTCCTCCAGTTCCATACTATGGCCGAGAAAGAGGAGGCGGAGGTGCTTTACCTAATGCCGGAGGCTTCAATGCCTTCCCACGATTTCAACCTCCCGCAGGACCGTTTAATGTCGGCCGCGGTGGCAGCGGTTTCGGTAGCAGCGGTGGTGGGAGGAGGATGTTTGATTCGGGGAGGGGCGGTAGAAGGACTGGTGGGAATATTGGTTCTGGAGGTGGACGTGGTGGAGGAACGGGATTTGACGGCCGTGGTGGTGGAAGAGGGGCTGGACGTGGTGGTGGTTCTTCAAGAGGGGATTTAGATAACATAGTCCTTCCGAGTCAGAATTTTGGGAATTTGGTCCCTTTTGAAAAGAATTTCTACACTGAGTGTCCTTCTGTGCGTGCAATGACGGAGTCTGAAGTTAAGATTTACAGAGAGAGGCATGATATTAGGGTGGAAGGATACGATGTCCCAAGACCAATTCGGAGTTTTCAGGAGGCGAATTTTCCTGCTTACTGCCTTGATGTAATTGCGAAATTGGGATTTGTTGAGCCAACTCCAATTCAGGCTCAAGGATGGCCGATGGCCTTGAAAGGAAGAGATTTGATTGGCATTGCTGAGACTGGCTCCGGGAAGACTCTGGCCTATCTACTGCCAGCTTTAATACACATTAGTGCCCAGCCTCGTTTATCACACGGTGAAGGTCCTATTGTGTTGGTGCTAGCACCCACCAGAGAATTAGCTGTTCAAATTCAACAAGAGGCTACTAAATTCGGGTTGCGTGCTAATATTAGAAGTACTTGCGTTTATGGTGGGGCTCCGAAGGGCCCTCAAATTCGTGATCTCAAAAATGGTGTTGAGATTGTTATTGCTACACCTGGACGGCTCATAGATATGCTGGAAGCTGGTCACACAAACCTGCGGCGAGTGACTTACCTTGTTTTAGATGAAGCAGATAGAATGCTGGACATGGGATTTGAGCCTCAAATAAGGACAATCGTTAGCCAAATCCGACCTGATAGGCAGACATTATATTGGAGTGCCACATGGCCAAGGGAGGTTGAGAAATTGGCTAGACAATTTTTACGCAATGCATATAAGGTGATTATTGGTTCACCAGATCTTAAAGCTAACCAGTCTATAAACCAAGTCGTTGAAGTTTTGCCAGAGGCTGAGAAATATAGAAGGTTAATAAAATTGCTCGTTGAAGTGATGGATGGTAGTCGTATTCTGATTTTTGTGGAAACAAAAAAGGGATGTGATAAAGTAACGAGGCAATTGAGAATGGATGGATGGCCAGCTCTATCCATTCATGGCGATAAAAAGCAGGCTGAAAGGGACTTGGTCTTGTCAGAATTTAAGAGTGGAAGAAATCCCATAATGACAGCCACGGATGTGGCTGCAAGAGGGCTTGATGTGAAAGATATAAAATGTGTGATCAACTATGATTTCCCATCAAGCCTCGAGGACTACGTACACAGGATAGGCCGAACAGGTCGTGCTGGTGCAAAGGGAACTGCATTCACATTCTTTACTCATGAGAATGCGAAACACGCCAGAGATCTTATAAAGATACTCCGAGAAGCAGGGCAGATTGTCACCCCTGCATTGTCTGCTTTAGCCTCGTATAGTGGCTTTGGAGGTTCTGGCACTAAATTCCGCCCTCAAGGACACAGAGGCAGCTTTGGTAATCGATCAATGGTTTCGGGATCAAATGCAATCCCTCTTGGTTTGACGTCAAGGCCTCACTAG

Protein sequence

MNPYDHRYADPNSYRERRSDLVGLQPAAPPPIVGRESLYKGYQPPPVPYYGRERGGGGALPNAGGFNAFPRFQPPAGPFNVGRGGSGFGSSGGGRRMFDSGRGGRRTGGNIGSGGGRGGGTGFDGRGGGRGAGRGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEVKIYRERHDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLRANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSINQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDKKQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALSALASYSGFGGSGTKFRPQGHRGSFGNRSMVSGSNAIPLGLTSRPH
Homology
[Close]
BLAST of Clc06G18600 vs. NCBI nr
Match: XP_038879141.1 (DEAD-box ATP-dependent RNA helicase 20-like isoform X1 [Benincasa hispida])

HSP 1 Score: 1189.1 bits (3075), Expect = 0.0e+00
Identity = 598/619 (96.61%), Postives = 607/619 (98.06%), Query Frame = 0 

Query: 1   MNPYDHRYADPNSYRERRSDLVGLQPAAPPPIVGRESLYKGYQPPPVPYYGRERGGGGAL 60
           MNPYDHRY DPNSYRERRSDLVGLQPA PPPIVGRESLYKGYQPPPVPYYGRERGGGGAL
Sbjct: 1   MNPYDHRYNDPNSYRERRSDLVGLQPAGPPPIVGRESLYKGYQPPPVPYYGRERGGGGAL 60

Query: 61  PNAGGFNAFPRFQPPAGPFNVGRGGSGFGSSGGGRRMFDSGRGGRRTGGNIGSGGGRGGG 120
           PNAGGFN FPRFQPPAGPFN+GRGGSG G+SGGGRRMFDSGRGGRRTGGNIG GGGRGGG
Sbjct: 61  PNAGGFNGFPRFQPPAGPFNIGRGGSGSGNSGGGRRMFDSGRGGRRTGGNIGFGGGRGGG 120

Query: 121 TGFDGRGGGRGAGRGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEVKI 180
           TGFDGR GGRGAGRGGGSSRGDLDNIVLP+QNFGNLVPFEKNFYTECPSVRAMTESEVKI
Sbjct: 121 TGFDGRAGGRGAGRGGGSSRGDLDNIVLPNQNFGNLVPFEKNFYTECPSVRAMTESEVKI 180

Query: 181 YRERHDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRDLI 240
           YRER DIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMA+KGRDLI
Sbjct: 181 YRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMAMKGRDLI 240

Query: 241 GIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLRAN 300
           GIAETGSGKTLAYLLPALIHISAQPRL+HGEGPIVLVLAPTRELAVQIQQEATKFGLRAN
Sbjct: 241 GIAETGSGKTLAYLLPALIHISAQPRLAHGEGPIVLVLAPTRELAVQIQQEATKFGLRAN 300

Query: 301 IRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLD 360
           IRSTC+YGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLD
Sbjct: 301 IRSTCIYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLD 360

Query: 361 MGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSINQ 420
           MGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSINQ
Sbjct: 361 MGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSINQ 420

Query: 421 VVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDKKQ 480
           VVEVLPE+EKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDKKQ
Sbjct: 421 VVEVLPESEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDKKQ 480

Query: 481 AERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGA 540
           AERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGA
Sbjct: 481 AERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGA 540

Query: 541 KGTAFTFFTHENAKHARDLIKILREAGQIVTPALSALASYSGFGGSGTKFRPQGHRGSFG 600
           KGTAFTFFTHENAKHARDLIKILREAGQIVTPALSALAS SGFGGS  KFRPQGHRG FG
Sbjct: 541 KGTAFTFFTHENAKHARDLIKILREAGQIVTPALSALASSSGFGGSSAKFRPQGHRGGFG 600

Query: 601 NRSMVSGSNAIPLGLTSRP 620
           NR+MVSGSNAIPLGL +RP
Sbjct: 601 NRTMVSGSNAIPLGLATRP 619

[Close]
BLAST of Clc06G18600 vs. NCBI nr
Match: XP_008464517.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 20 isoform X1 [Cucumis melo] >TYJ98508.1 DEAD-box ATP-dependent RNA helicase 20 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1165.6 bits (3014), Expect = 0.0e+00
Identity = 593/621 (95.49%), Postives = 599/621 (96.46%), Query Frame = 0 

Query: 1   MNPYDHRYADPNSYRERRSDLVGLQPAAPPPIVGRESLYKGYQPPPVPYYGRERGGGGAL 60
           MNPYDHRYADPNSYR+RRSDLVG QPAAPPPI GRESLYKGYQPPP PYYGRERGGGGAL
Sbjct: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60

Query: 61  PNAGGFNAFPRFQPPAGPFNVGR-GGSGFGSSGGGRRMFDSGRGGRRTGGNIGSGGGRGG 120
            NAGG N  PRFQPPAGPFN+GR GG GF SSGGGRRMFDS RGGRRTGGNIG GGGRGG
Sbjct: 61  ANAGGVNGLPRFQPPAGPFNIGRGGGGGFSSSGGGRRMFDSERGGRRTGGNIGFGGGRGG 120

Query: 121 GTGFDGRGGGRGAGRGG-GSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180
           GTGFDGRGGGRG GRGG GSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVR MTESEV
Sbjct: 121 GTGFDGRGGGRGGGRGGAGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRVMTESEV 180

Query: 181 KIYRERHDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240
           KIYRER DIRVEGYDVP+PIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD
Sbjct: 181 KIYRERRDIRVEGYDVPKPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240

Query: 241 LIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLR 300
           LIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLR
Sbjct: 241 LIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLR 300

Query: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360
           ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM
Sbjct: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360

Query: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI 420
           LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGS DLKANQSI
Sbjct: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSSDLKANQSI 420

Query: 421 NQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480
           NQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK
Sbjct: 421 NQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480

Query: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRA 540
           KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRA
Sbjct: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRA 540

Query: 541 GAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALSALASYSGFGGSGTKFRPQGHRGS 600
           GAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALS LAS SGFGGSG KFRPQGHRG 
Sbjct: 541 GAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALSTLASSSGFGGSGAKFRPQGHRGG 600

Query: 601 FGNRSMVSGSNAIPLGLTSRP 620
           FG+R+MVSGSNAIPLGL +RP
Sbjct: 601 FGHRTMVSGSNAIPLGLATRP 621

[Close]
BLAST of Clc06G18600 vs. NCBI nr
Match: KAA0057824.1 (DEAD-box ATP-dependent RNA helicase 20 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1162.5 bits (3006), Expect = 0.0e+00
Identity = 592/621 (95.33%), Postives = 598/621 (96.30%), Query Frame = 0 

Query: 1   MNPYDHRYADPNSYRERRSDLVGLQPAAPPPIVGRESLYKGYQPPPVPYYGRERGGGGAL 60
           MNPYDHRYADPNSYR+RRSDLVG QPAAPP I GRESLYKGYQPPP PYYGRERGGGGAL
Sbjct: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPSIAGRESLYKGYQPPPAPYYGRERGGGGAL 60

Query: 61  PNAGGFNAFPRFQPPAGPFNVGR-GGSGFGSSGGGRRMFDSGRGGRRTGGNIGSGGGRGG 120
            NAGG N  PRFQPPAGPFN+GR GG GF SSGGGRRMFDS RGGRRTGGNIG GGGRGG
Sbjct: 61  ANAGGVNGLPRFQPPAGPFNIGRGGGGGFSSSGGGRRMFDSERGGRRTGGNIGFGGGRGG 120

Query: 121 GTGFDGRGGGRGAGRGG-GSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180
           GTGFDGRGGGRG GRGG GSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVR MTESEV
Sbjct: 121 GTGFDGRGGGRGGGRGGAGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRVMTESEV 180

Query: 181 KIYRERHDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240
           KIYRER DIRVEGYDVP+PIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD
Sbjct: 181 KIYRERRDIRVEGYDVPKPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240

Query: 241 LIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLR 300
           LIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLR
Sbjct: 241 LIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLR 300

Query: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360
           ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM
Sbjct: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360

Query: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI 420
           LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGS DLKANQSI
Sbjct: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSSDLKANQSI 420

Query: 421 NQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480
           NQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK
Sbjct: 421 NQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480

Query: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRA 540
           KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRA
Sbjct: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRA 540

Query: 541 GAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALSALASYSGFGGSGTKFRPQGHRGS 600
           GAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALS LAS SGFGGSG KFRPQGHRG 
Sbjct: 541 GAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALSTLASSSGFGGSGAKFRPQGHRGG 600

Query: 601 FGNRSMVSGSNAIPLGLTSRP 620
           FG+R+MVSGSNAIPLGL +RP
Sbjct: 601 FGHRTMVSGSNAIPLGLATRP 621

[Close]
BLAST of Clc06G18600 vs. NCBI nr
Match: XP_004138092.1 (DEAD-box ATP-dependent RNA helicase 20 isoform X1 [Cucumis sativus] >KGN63546.2 hypothetical protein Csa_013269 [Cucumis sativus])

HSP 1 Score: 1157.5 bits (2993), Expect = 0.0e+00
Identity = 589/621 (94.85%), Postives = 598/621 (96.30%), Query Frame = 0 

Query: 1   MNPYDHRYADPNSYRERRSDLVGLQPAAPPPIVGRESLYKGYQPPPVPYYGRERGGGGAL 60
           MNPYDHRYADPNSYR+RRSDLVG QPAAPPPI GRESLYKGYQPPP PYYGRERGGGGAL
Sbjct: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60

Query: 61  PNAGGFNAFPRFQPPAGPFNVGR-GGSGFGSSGGGRRMFDSGRGGRRTGGNIGSGGGRGG 120
           PNAGG N  PRFQPPAG FN+GR GG GFGSSGGGRR FD+ RGGRR GG+IG GGGRGG
Sbjct: 61  PNAGGVNGLPRFQPPAGSFNIGRGGGGGFGSSGGGRRTFDAERGGRRIGGSIGFGGGRGG 120

Query: 121 GTGFDGRGGGRGAGR-GGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180
           GTGFDGRGGGRG GR GGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV
Sbjct: 121 GTGFDGRGGGRGGGRGGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180

Query: 181 KIYRERHDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240
           KIYRER DIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD
Sbjct: 181 KIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240

Query: 241 LIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLR 300
           L+GIAETGSGKTLAYLLPA+IHISAQPRLS GEGPIVLVLAPTRELAVQIQQEATKFGL 
Sbjct: 241 LVGIAETGSGKTLAYLLPAVIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLH 300

Query: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360
           ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM
Sbjct: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360

Query: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI 420
           LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI
Sbjct: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI 420

Query: 421 NQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480
           NQVVEVLPEAEKYRRLIKLL EVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK
Sbjct: 421 NQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480

Query: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRA 540
           KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVIN+DFPSSLEDYVHRIGRTGRA
Sbjct: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINFDFPSSLEDYVHRIGRTGRA 540

Query: 541 GAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALSALASYSGFGGSGTKFRPQGHRGS 600
           GAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALSALAS SGFGGSG KFR QGHRG 
Sbjct: 541 GAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALSALASSSGFGGSGAKFRSQGHRGG 600

Query: 601 FGNRSMVSGSNAIPLGLTSRP 620
           FGNR+MVSGSNAIPLGLT+RP
Sbjct: 601 FGNRTMVSGSNAIPLGLTTRP 621

[Close]
BLAST of Clc06G18600 vs. NCBI nr
Match: XP_022965035.1 (DEAD-box ATP-dependent RNA helicase 20-like [Cucurbita moschata])

HSP 1 Score: 1116.3 bits (2886), Expect = 0.0e+00
Identity = 568/616 (92.21%), Postives = 587/616 (95.29%), Query Frame = 0 

Query: 1   MNPYDHRYADPNSYRERRSDLVGLQPAAPPPIVGRESLYKGYQPPPVPYYGRERGGGGAL 60
           MNPYDHRYADPNSYRERRSDLVG QPAAPPPI GRES+YKG+ PPPVPYYGRERGGGGAL
Sbjct: 1   MNPYDHRYADPNSYRERRSDLVGPQPAAPPPIAGRESMYKGFHPPPVPYYGRERGGGGAL 60

Query: 61  PNAGGFNAFPRFQPPAGPFNVGRGGSGFGSSGGGRRMFDSGRGGRRTGGNIGSGGGRGGG 120
           PNAGGFN FPRFQPPAGPFN+GR G+ FGS  GGRRMFDSGR     GGN+G GG RGGG
Sbjct: 61  PNAGGFNGFPRFQPPAGPFNIGRSGNDFGS--GGRRMFDSGR-----GGNMGFGGRRGGG 120

Query: 121 TGFDGRGGGRGAGRGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEVKI 180
           TGF+GR GG GAGR GGSSRGDLDNIVLPSQNFG+LVPFEKNFYTECPSVRAMTESEVK+
Sbjct: 121 TGFEGRVGGSGAGR-GGSSRGDLDNIVLPSQNFGDLVPFEKNFYTECPSVRAMTESEVKM 180

Query: 181 YRERHDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRDLI 240
           YRER DIRVEGYDVP+PIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMA+KGRDLI
Sbjct: 181 YRERRDIRVEGYDVPKPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMAMKGRDLI 240

Query: 241 GIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLRAN 300
           GIAETGSGKTLAYLLPALIHISAQPRL HG+GPIVLVLAPTRELAVQIQQE TKFGLRAN
Sbjct: 241 GIAETGSGKTLAYLLPALIHISAQPRLVHGQGPIVLVLAPTRELAVQIQQEVTKFGLRAN 300

Query: 301 IRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLD 360
           IRSTC+YGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNL+RVTYLVLDEADRMLD
Sbjct: 301 IRSTCIYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLQRVTYLVLDEADRMLD 360

Query: 361 MGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSINQ 420
           MGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFL NAYKVIIGS DLKANQSINQ
Sbjct: 361 MGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLHNAYKVIIGSSDLKANQSINQ 420

Query: 421 VVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDKKQ 480
           VVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDKKQ
Sbjct: 421 VVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDKKQ 480

Query: 481 AERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGA 540
           AERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGA
Sbjct: 481 AERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGA 540

Query: 541 KGTAFTFFTHENAKHARDLIKILREAGQIVTPALSALASYSGFGGSGTKFRPQGHRGSFG 600
           KGTAFTFFTHENAKHAR+LIKILREAGQIV+PALSALAS SG GGS +K+RPQGHRG  G
Sbjct: 541 KGTAFTFFTHENAKHARELIKILREAGQIVSPALSALASSSGTGGSSSKYRPQGHRGFGG 600

Query: 601 NRSMVSGSNAIPLGLT 617
           NR+MVSG NAIP+GLT
Sbjct: 601 NRTMVSGPNAIPIGLT 608

[Close]
BLAST of Clc06G18600 vs. ExPASy Swiss-Prot
Match: Q8W4R3 (DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana OX=3702 GN=RH30 PE=1 SV=2)

HSP 1 Score: 793.9 bits (2049), Expect = 1.3e-228
Identity = 419/627 (66.83%), Postives = 482/627 (76.87%), Query Frame = 0 

Query: 1   MNPYDHRYADPNSYRERRSDLVGLQPAAPPPIVGRESLYKGYQPPPVPYYGRERGGGGA- 60
           M+ YD R+ADPNSYR+R    VG                +   P   PY  R  GGGG  
Sbjct: 1   MSSYDRRFADPNSYRQRSGAPVGSS--------------QPMDPSAAPYNPRYTGGGGGY 60

Query: 61  ------LPNAGGFNAFPRFQPPAGPFNVGRGGSGFGSSGGGRRMFDSGRGGRRTGGNIGS 120
                   +  G+N +P FQPP+G F+VGRGG   G  G G+       G R  GGN G 
Sbjct: 61  GPSPVMAGDNSGYNRYPSFQPPSGGFSVGRGG---GRGGYGQ------YGDRNGGGNWGG 120

Query: 121 GGGRGGGTGFDGRGGGRGAGRGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAM 180
           GGGR                  GGSS+ +LD++ LP QNFGNLV FEKNFY E P+V+AM
Sbjct: 121 GGGR------------------GGSSKRELDSVSLPKQNFGNLVHFEKNFYVESPTVQAM 180

Query: 181 TESEVKIYRERHDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMA 240
           TE +V +YR   DI VEG DVP+P++ FQ+ANFP   L+ IAKLGF EPTPIQAQGWPMA
Sbjct: 181 TEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMA 240

Query: 241 LKGRDLIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEAT 300
           LKGRDLIGIAETGSGKTLAYLLPAL+H+SAQPRL   +GPIVL+LAPTRELAVQIQ+E+ 
Sbjct: 241 LKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIVLILAPTRELAVQIQEESR 300

Query: 301 KFGLRANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLD 360
           KFGLR+ +RSTC+YGGAPKGPQIRDL+ GVEIVIATPGRLIDMLE  HTNL+RVTYLVLD
Sbjct: 301 KFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLD 360

Query: 361 EADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLK 420
           EADRMLDMGFEPQIR IVSQIRPDRQTL WSATWPREVE LARQFLR+ YK IIGS DLK
Sbjct: 361 EADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLK 420

Query: 421 ANQSINQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALS 480
           ANQSINQV+E++P  EKY RL+ LL ++MDGS+ILIFVETK+GCD+VTRQLRMDGWPAL+
Sbjct: 421 ANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALA 480

Query: 481 IHGDKKQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIG 540
           IHGDK Q+ERD VL+EFKSGR+PIMTATDVAARGLDVKDIKCV+NYDFP++LEDY+HRIG
Sbjct: 481 IHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIG 540

Query: 541 RTGRAGAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALSAL--ASYSGFGGS--GTK 600
           RTGRAGAKG AFTFFTH+NAK AR+L+KIL+EAGQ+V P LSAL  +S SG+GGS  G  
Sbjct: 541 RTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQVVPPTLSALVRSSGSGYGGSGGGRN 586

Query: 601 FRPQ--GHRGSFGNRSMVSGSNAIPLG 615
           FRP+  G  G FG++   S SN +P G
Sbjct: 601 FRPRGGGRGGGFGDKRSRSTSNFVPHG 586

[Close]
BLAST of Clc06G18600 vs. ExPASy Swiss-Prot
Match: Q5N7W4 (DEAD-box ATP-dependent RNA helicase 30 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0911100 PE=2 SV=2)

HSP 1 Score: 768.1 bits (1982), Expect = 7.7e-221
Identity = 410/613 (66.88%), Postives = 464/613 (75.69%), Query Frame = 0 

Query: 1   MNPYDHRYADPNSYRERRSDLVGLQPAAPPPIVGRESLYKGYQPPPVPYYGRERGGGGAL 60
           MNPYD RYADP+SYR+RRSDL G    A             Y P P            A 
Sbjct: 96  MNPYDLRYADPSSYRDRRSDLAGAPVLAASAPAAANPYAAAYAPAP------------AA 155

Query: 61  PNAGGFNAFPRFQPPAGPFNVGRGGSGFGSSGGGRRMFDSGRGGRRTGGNIGSGGGRGGG 120
           P A     F RF                    GGR     GRGG   GG  G GGG GGG
Sbjct: 156 PVAPAGGDFSRF--------------------GGR-----GRGGGAGGGGWGRGGGGGGG 215

Query: 121 TGFDGRGGGRGAGRGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEVKI 180
            G    GGGRG GR        LD++ LP  +F +L+PFEKNFY ECP+V+AM++ +V  
Sbjct: 216 AGGYRGGGGRGGGRDA------LDSLSLPKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQ 275

Query: 181 YRERHDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRDLI 240
           YR + DI VEG+DVP+P+R FQEANFP YC+  IAK GFVEPTPIQ+QGWPMALKGRD+I
Sbjct: 276 YRRQRDITVEGHDVPKPVRYFQEANFPDYCMQAIAKSGFVEPTPIQSQGWPMALKGRDMI 335

Query: 241 GIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLRAN 300
           GIA+TGSGKTL+YLLP L+H+ AQPRL  G+GPIVL+LAPTRELAVQIQQE+ KFG  + 
Sbjct: 336 GIAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQQESGKFGSYSR 395

Query: 301 IRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLD 360
            RSTC+YGGAPKGPQIRDL+ GVEIVIATPGRLIDMLE GHTNLRRVTYLVLDEADRMLD
Sbjct: 396 TRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEGGHTNLRRVTYLVLDEADRMLD 455

Query: 361 MGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSINQ 420
           MGFEPQIR IV+QIRPDRQTLYWSATWPREVE LARQFL+N YKVIIGSPDLKAN SI Q
Sbjct: 456 MGFEPQIRKIVAQIRPDRQTLYWSATWPREVESLARQFLQNPYKVIIGSPDLKANHSIQQ 515

Query: 421 VVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDKKQ 480
           ++EV+ E EKY RL KLL ++MDGSRILIF +TKK CDKVTRQLRMDGWPALSIHGDK Q
Sbjct: 516 IIEVISEHEKYPRLSKLLSDLMDGSRILIFFQTKKDCDKVTRQLRMDGWPALSIHGDKAQ 575

Query: 481 AERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGA 540
           AERD VL+EFKSG++PIM ATDVAARGLDVKDIKCVIN+DFP++LEDY+HRIGRTGRAGA
Sbjct: 576 AERDYVLAEFKSGKSPIMAATDVAARGLDVKDIKCVINFDFPTTLEDYIHRIGRTGRAGA 635

Query: 541 KGTAFTFFTHENAKHARDLIKILREAGQIVTPALSALASYSGFGGSGTKFRPQGHRGSFG 600
            GTAFTFFT  NAK +R+L+KILREAGQ+V PAL ++A  +   G G  FR +G RG FG
Sbjct: 636 SGTAFTFFTLSNAKFSRNLVKILREAGQVVNPALESMAKSASSMGGG-NFRSRG-RGGFG 660

Query: 601 NRSMVSGSNAIPL 614
           NR   SGSN+IP+
Sbjct: 696 NR---SGSNSIPI 660

[Close]
BLAST of Clc06G18600 vs. ExPASy Swiss-Prot
Match: Q5QMN3 (DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0197200 PE=3 SV=2)

HSP 1 Score: 667.2 bits (1720), Expect = 1.9e-190
Identity = 336/486 (69.14%), Postives = 393/486 (80.86%), Query Frame = 0 

Query: 123 FDGRGGGRGA-------GRGGGSSRG----DLDNIVLPSQNFGNLVPFEKNFYTECPSVR 182
           FDGR    G+       G  GG +R        +    + +   L  FEKNFY E PSV 
Sbjct: 4   FDGRAADPGSYRDRRSEGAFGGGTRAFAPTSKADSAAAAADLDGLPRFEKNFYVESPSVA 63

Query: 183 AMTESEVKIYRERHDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWP 242
            MTE EV+ YR R +I VEG DVP+P+R F++  FP Y L  I K GFVEPTPIQ+QGWP
Sbjct: 64  GMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQGWP 123

Query: 243 MALKGRDLIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQE 302
           MAL+GRDLIGIAETGSGKTLAYLLPA++H++AQP L+ G+GPIVLVLAPTRELAVQIQQE
Sbjct: 124 MALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQE 183

Query: 303 ATKFGLRANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLV 362
           ATKFG  + I+STC+YGG PKGPQ+RDL+ GVEIVIATPGRLIDM+E+ HTNLRRVTYLV
Sbjct: 184 ATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMIESHHTNLRRVTYLV 243

Query: 363 LDEADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPD 422
           LDEADRMLDMGFEPQI+ IVSQIRPDRQTLYWSATWP+EVE+LAR FL + YKVIIGS +
Sbjct: 244 LDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQLARNFLFDPYKVIIGSEE 303

Query: 423 LKANQSINQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPA 482
           LKAN +I+Q VE+L E++KY +L+ LL ++MDGSRILIF++TKKGCD++TRQLRMDGWPA
Sbjct: 304 LKANHAISQHVEILSESQKYNKLVNLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPA 363

Query: 483 LSIHGDKKQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHR 542
           LSIHGDK QAERD VLSEFKSG++PIMTATDVAARGLDVKD+K VINYDFP SLEDYVHR
Sbjct: 364 LSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHR 423

Query: 543 IGRTGRAGAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALSALASYSGFGGSGTKFR 598
           IGRTGRAGAKGTA+TFFT  NA+ A+DLI IL EAGQ V+P L+ +   +    SG + R
Sbjct: 424 IGRTGRAGAKGTAYTFFTAANARFAKDLINILEEAGQKVSPELANMGRGAPPPSSGHRDR 483

[Close]
BLAST of Clc06G18600 vs. ExPASy Swiss-Prot
Match: Q9C718 (DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana OX=3702 GN=RH20 PE=2 SV=1)

HSP 1 Score: 653.3 bits (1684), Expect = 2.8e-186
Identity = 330/505 (65.35%), Postives = 409/505 (80.99%), Query Frame = 0 

Query: 98  FDSGRGGRRTGGNIGSGGGRGGGTGFDGRGGGRGAGRGGGSSRGDLDNIVLPSQ-NFGNL 157
           +DS  G   +  +  S  G GG + +       G+     SS+ D D    P + +   L
Sbjct: 4   YDSRTGDSTSYRDRRSDSGFGGTSSY-------GSSGSHTSSKKDNDGNESPRKLDLDGL 63

Query: 158 VPFEKNFYTECPSVRAMTESEVKIYRERHDIRVEGYDVPRPIRSFQEANFPAYCLDVIAK 217
            PFEKNFY E P+V AMT++EV+ YR+  +I VEG D+P+P++SF++  FP Y L+ + K
Sbjct: 64  TPFEKNFYVESPAVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKK 123

Query: 218 LGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVL 277
            GF EPTPIQ+QGWPMA+KGRDLIGIAETGSGKTL+YLLPA++H++AQP L+HG+GPIVL
Sbjct: 124 AGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIVL 183

Query: 278 VLAPTRELAVQIQQEATKFGLRANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDM 337
           VLAPTRELAVQIQQEA+KFG  + I++TC+YGG PKGPQ+RDL+ GVEIVIATPGRLIDM
Sbjct: 184 VLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM 243

Query: 338 LEAGHTNLRRVTYLVLDEADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLAR 397
           +E+ +TNLRRVTYLVLDEADRMLDMGF+PQIR IVS IRPDRQTLYWSATWP+EVE+L++
Sbjct: 244 MESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSK 303

Query: 398 QFLRNAYKVIIGSPDLKANQSINQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKG 457
           +FL N YKVIIGS DLKAN++I Q+V+V+ E++KY +L+KLL ++MDGSRIL+F++TKKG
Sbjct: 304 KFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKG 363

Query: 458 CDKVTRQLRMDGWPALSIHGDKKQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCV 517
           CD++TRQLRMDGWPALSIHGDK QAERD VLSEF+SG++PIMTATDVAARGLDVKD+K V
Sbjct: 364 CDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYV 423

Query: 518 INYDFPSSLEDYVHRIGRTGRAGAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALSA 577
           INYDFP SLEDYVHRIGRTGRAGAKGTA+TFFT  NA+ A++L  IL+EAGQ V+P L++
Sbjct: 424 INYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELTNILQEAGQKVSPELAS 483

Query: 578 LASYS-----GFGGSGTKFRPQGHR 597
           +   +     G GG    FR +G R
Sbjct: 484 MGRSTAPPPPGLGG----FRDRGSR 497

[Close]
BLAST of Clc06G18600 vs. ExPASy Swiss-Prot
Match: Q5B0J9 (ATP-dependent RNA helicase dbp2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=dbp2 PE=3 SV=1)

HSP 1 Score: 597.4 bits (1539), Expect = 1.8e-169
Identity = 328/541 (60.63%), Postives = 390/541 (72.09%), Query Frame = 0 

Query: 82  GRGGSGFGSSGGGRRMFDSGRGGRRTGGNIGSGG-GRGGGTGFDGRGGGRGAGRGGGSSR 141
           G GG G G  GGG     SG GG   GG  G GG GRGGG    G GG R    G G  +
Sbjct: 34  GYGGRGGGYGGGG----GSGYGGGYGGGGYGGGGYGRGGGGAGAGAGGDRMGNLGSGLKK 93

Query: 142 GDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEVKIYRERHDIRVEGYDVPRPIRS 201
            D D   LP         FEK+FY E P V A ++ EV  +R++ ++ V+G DVPRP+ +
Sbjct: 94  QDWDLDTLPK--------FEKSFYKEHPDVTARSQREVDEFRKKCEMTVQGRDVPRPVET 153

Query: 202 FQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALIH 261
           F EA FP Y L  +   GF +PT IQ+QGWPMAL GRD++GIAETGSGKTL+Y LPA++H
Sbjct: 154 FDEAGFPQYVLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAIVH 213

Query: 262 ISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLRANIRSTCVYGGAPKGPQIRDLK 321
           I+AQP L+ G+GPIVL+LAPTRELAVQIQ E +KFG  + IR+TCVYGG PKGPQIRDL 
Sbjct: 214 INAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLS 273

Query: 322 NGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFEPQIRTIVSQIRPDRQT 381
            GVE+ IATPGRLIDMLEAG TNLRRVTYLVLDEADRMLDMGFEPQIR I+SQIRPDRQT
Sbjct: 274 RGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQT 333

Query: 382 LYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSINQVVEVLPEAEKYRRLIKLLVE 441
             WSATWP+EV +LA  FL N  +V IGS DL AN  I Q+VEV+ E EK  R+IK L +
Sbjct: 334 CMWSATWPKEVRQLASDFLNNYIQVNIGSMDLSANHRITQIVEVISEFEKRDRMIKHLEK 393

Query: 442 VMD--GSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDKKQAERDLVLSEFKSGRNPIM 501
           +M+  G++ L+F  TK+  D++TR LR DGWPALSIHGDK+Q ERD VL+EFK+G++PIM
Sbjct: 394 IMENRGNKCLVFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIM 453

Query: 502 TATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGAKGTAFTFFTHENAKHARD 561
            ATDVA+RG+DV+DI  VINYD+P++ EDYVHRIGRTGRAGAKGTA TFFT +NAK ARD
Sbjct: 454 VATDVASRGIDVRDITHVINYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNAKQARD 513

Query: 562 LIKILREAGQIVTPALSALASYSGFGGSGTKF-RPQGHRGSFGNRSMVSGSNAIPLGLTS 619
           L+ IL EA Q + P L+ +  YSG GG G  + R  G  G  G     + SNA PLG   
Sbjct: 514 LVTILSEAKQQIDPRLAEMVRYSGGGGHGGGYGRWGGRGGGRGRGGNFTASNAAPLGNNR 562

[Close]
BLAST of Clc06G18600 vs. ExPASy TrEMBL
Match: A0A5D3BJX7 (DEAD-box ATP-dependent RNA helicase 20 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001110 PE=3 SV=1)

HSP 1 Score: 1165.6 bits (3014), Expect = 0.0e+00
Identity = 593/621 (95.49%), Postives = 599/621 (96.46%), Query Frame = 0 

Query: 1   MNPYDHRYADPNSYRERRSDLVGLQPAAPPPIVGRESLYKGYQPPPVPYYGRERGGGGAL 60
           MNPYDHRYADPNSYR+RRSDLVG QPAAPPPI GRESLYKGYQPPP PYYGRERGGGGAL
Sbjct: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60

Query: 61  PNAGGFNAFPRFQPPAGPFNVGR-GGSGFGSSGGGRRMFDSGRGGRRTGGNIGSGGGRGG 120
            NAGG N  PRFQPPAGPFN+GR GG GF SSGGGRRMFDS RGGRRTGGNIG GGGRGG
Sbjct: 61  ANAGGVNGLPRFQPPAGPFNIGRGGGGGFSSSGGGRRMFDSERGGRRTGGNIGFGGGRGG 120

Query: 121 GTGFDGRGGGRGAGRGG-GSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180
           GTGFDGRGGGRG GRGG GSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVR MTESEV
Sbjct: 121 GTGFDGRGGGRGGGRGGAGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRVMTESEV 180

Query: 181 KIYRERHDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240
           KIYRER DIRVEGYDVP+PIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD
Sbjct: 181 KIYRERRDIRVEGYDVPKPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240

Query: 241 LIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLR 300
           LIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLR
Sbjct: 241 LIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLR 300

Query: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360
           ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM
Sbjct: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360

Query: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI 420
           LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGS DLKANQSI
Sbjct: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSSDLKANQSI 420

Query: 421 NQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480
           NQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK
Sbjct: 421 NQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480

Query: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRA 540
           KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRA
Sbjct: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRA 540

Query: 541 GAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALSALASYSGFGGSGTKFRPQGHRGS 600
           GAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALS LAS SGFGGSG KFRPQGHRG 
Sbjct: 541 GAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALSTLASSSGFGGSGAKFRPQGHRGG 600

Query: 601 FGNRSMVSGSNAIPLGLTSRP 620
           FG+R+MVSGSNAIPLGL +RP
Sbjct: 601 FGHRTMVSGSNAIPLGLATRP 621

[Close]
BLAST of Clc06G18600 vs. ExPASy TrEMBL
Match: A0A1S3CLM7 (DEAD-box ATP-dependent RNA helicase 20 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502377 PE=3 SV=1)

HSP 1 Score: 1165.6 bits (3014), Expect = 0.0e+00
Identity = 593/621 (95.49%), Postives = 599/621 (96.46%), Query Frame = 0 

Query: 1   MNPYDHRYADPNSYRERRSDLVGLQPAAPPPIVGRESLYKGYQPPPVPYYGRERGGGGAL 60
           MNPYDHRYADPNSYR+RRSDLVG QPAAPPPI GRESLYKGYQPPP PYYGRERGGGGAL
Sbjct: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60

Query: 61  PNAGGFNAFPRFQPPAGPFNVGR-GGSGFGSSGGGRRMFDSGRGGRRTGGNIGSGGGRGG 120
            NAGG N  PRFQPPAGPFN+GR GG GF SSGGGRRMFDS RGGRRTGGNIG GGGRGG
Sbjct: 61  ANAGGVNGLPRFQPPAGPFNIGRGGGGGFSSSGGGRRMFDSERGGRRTGGNIGFGGGRGG 120

Query: 121 GTGFDGRGGGRGAGRGG-GSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180
           GTGFDGRGGGRG GRGG GSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVR MTESEV
Sbjct: 121 GTGFDGRGGGRGGGRGGAGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRVMTESEV 180

Query: 181 KIYRERHDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240
           KIYRER DIRVEGYDVP+PIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD
Sbjct: 181 KIYRERRDIRVEGYDVPKPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240

Query: 241 LIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLR 300
           LIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLR
Sbjct: 241 LIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLR 300

Query: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360
           ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM
Sbjct: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360

Query: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI 420
           LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGS DLKANQSI
Sbjct: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSSDLKANQSI 420

Query: 421 NQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480
           NQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK
Sbjct: 421 NQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480

Query: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRA 540
           KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRA
Sbjct: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRA 540

Query: 541 GAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALSALASYSGFGGSGTKFRPQGHRGS 600
           GAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALS LAS SGFGGSG KFRPQGHRG 
Sbjct: 541 GAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALSTLASSSGFGGSGAKFRPQGHRGG 600

Query: 601 FGNRSMVSGSNAIPLGLTSRP 620
           FG+R+MVSGSNAIPLGL +RP
Sbjct: 601 FGHRTMVSGSNAIPLGLATRP 621

[Close]
BLAST of Clc06G18600 vs. ExPASy TrEMBL
Match: A0A5A7URR2 (DEAD-box ATP-dependent RNA helicase 20 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001090 PE=3 SV=1)

HSP 1 Score: 1162.5 bits (3006), Expect = 0.0e+00
Identity = 592/621 (95.33%), Postives = 598/621 (96.30%), Query Frame = 0 

Query: 1   MNPYDHRYADPNSYRERRSDLVGLQPAAPPPIVGRESLYKGYQPPPVPYYGRERGGGGAL 60
           MNPYDHRYADPNSYR+RRSDLVG QPAAPP I GRESLYKGYQPPP PYYGRERGGGGAL
Sbjct: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPSIAGRESLYKGYQPPPAPYYGRERGGGGAL 60

Query: 61  PNAGGFNAFPRFQPPAGPFNVGR-GGSGFGSSGGGRRMFDSGRGGRRTGGNIGSGGGRGG 120
            NAGG N  PRFQPPAGPFN+GR GG GF SSGGGRRMFDS RGGRRTGGNIG GGGRGG
Sbjct: 61  ANAGGVNGLPRFQPPAGPFNIGRGGGGGFSSSGGGRRMFDSERGGRRTGGNIGFGGGRGG 120

Query: 121 GTGFDGRGGGRGAGRGG-GSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180
           GTGFDGRGGGRG GRGG GSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVR MTESEV
Sbjct: 121 GTGFDGRGGGRGGGRGGAGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRVMTESEV 180

Query: 181 KIYRERHDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240
           KIYRER DIRVEGYDVP+PIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD
Sbjct: 181 KIYRERRDIRVEGYDVPKPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240

Query: 241 LIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLR 300
           LIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLR
Sbjct: 241 LIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLR 300

Query: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360
           ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM
Sbjct: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360

Query: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI 420
           LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGS DLKANQSI
Sbjct: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSSDLKANQSI 420

Query: 421 NQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480
           NQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK
Sbjct: 421 NQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480

Query: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRA 540
           KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRA
Sbjct: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRA 540

Query: 541 GAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALSALASYSGFGGSGTKFRPQGHRGS 600
           GAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALS LAS SGFGGSG KFRPQGHRG 
Sbjct: 541 GAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALSTLASSSGFGGSGAKFRPQGHRGG 600

Query: 601 FGNRSMVSGSNAIPLGLTSRP 620
           FG+R+MVSGSNAIPLGL +RP
Sbjct: 601 FGHRTMVSGSNAIPLGLATRP 621

[Close]
BLAST of Clc06G18600 vs. ExPASy TrEMBL
Match: A0A6J1HMK2 (DEAD-box ATP-dependent RNA helicase 20-like OS=Cucurbita moschata OX=3662 GN=LOC111464981 PE=3 SV=1)

HSP 1 Score: 1116.3 bits (2886), Expect = 0.0e+00
Identity = 568/616 (92.21%), Postives = 587/616 (95.29%), Query Frame = 0 

Query: 1   MNPYDHRYADPNSYRERRSDLVGLQPAAPPPIVGRESLYKGYQPPPVPYYGRERGGGGAL 60
           MNPYDHRYADPNSYRERRSDLVG QPAAPPPI GRES+YKG+ PPPVPYYGRERGGGGAL
Sbjct: 1   MNPYDHRYADPNSYRERRSDLVGPQPAAPPPIAGRESMYKGFHPPPVPYYGRERGGGGAL 60

Query: 61  PNAGGFNAFPRFQPPAGPFNVGRGGSGFGSSGGGRRMFDSGRGGRRTGGNIGSGGGRGGG 120
           PNAGGFN FPRFQPPAGPFN+GR G+ FGS  GGRRMFDSGR     GGN+G GG RGGG
Sbjct: 61  PNAGGFNGFPRFQPPAGPFNIGRSGNDFGS--GGRRMFDSGR-----GGNMGFGGRRGGG 120

Query: 121 TGFDGRGGGRGAGRGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEVKI 180
           TGF+GR GG GAGR GGSSRGDLDNIVLPSQNFG+LVPFEKNFYTECPSVRAMTESEVK+
Sbjct: 121 TGFEGRVGGSGAGR-GGSSRGDLDNIVLPSQNFGDLVPFEKNFYTECPSVRAMTESEVKM 180

Query: 181 YRERHDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRDLI 240
           YRER DIRVEGYDVP+PIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMA+KGRDLI
Sbjct: 181 YRERRDIRVEGYDVPKPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMAMKGRDLI 240

Query: 241 GIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLRAN 300
           GIAETGSGKTLAYLLPALIHISAQPRL HG+GPIVLVLAPTRELAVQIQQE TKFGLRAN
Sbjct: 241 GIAETGSGKTLAYLLPALIHISAQPRLVHGQGPIVLVLAPTRELAVQIQQEVTKFGLRAN 300

Query: 301 IRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLD 360
           IRSTC+YGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNL+RVTYLVLDEADRMLD
Sbjct: 301 IRSTCIYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLQRVTYLVLDEADRMLD 360

Query: 361 MGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSINQ 420
           MGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFL NAYKVIIGS DLKANQSINQ
Sbjct: 361 MGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLHNAYKVIIGSSDLKANQSINQ 420

Query: 421 VVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDKKQ 480
           VVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDKKQ
Sbjct: 421 VVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDKKQ 480

Query: 481 AERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGA 540
           AERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGA
Sbjct: 481 AERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGA 540

Query: 541 KGTAFTFFTHENAKHARDLIKILREAGQIVTPALSALASYSGFGGSGTKFRPQGHRGSFG 600
           KGTAFTFFTHENAKHAR+LIKILREAGQIV+PALSALAS SG GGS +K+RPQGHRG  G
Sbjct: 541 KGTAFTFFTHENAKHARELIKILREAGQIVSPALSALASSSGTGGSSSKYRPQGHRGFGG 600

Query: 601 NRSMVSGSNAIPLGLT 617
           NR+MVSG NAIP+GLT
Sbjct: 601 NRTMVSGPNAIPIGLT 608

[Close]
BLAST of Clc06G18600 vs. ExPASy TrEMBL
Match: A0A6J1JDK6 (DEAD-box ATP-dependent RNA helicase 20-like OS=Cucurbita maxima OX=3661 GN=LOC111484847 PE=3 SV=1)

HSP 1 Score: 1109.4 bits (2868), Expect = 0.0e+00
Identity = 563/616 (91.40%), Postives = 586/616 (95.13%), Query Frame = 0 

Query: 1   MNPYDHRYADPNSYRERRSDLVGLQPAAPPPIVGRESLYKGYQPPPVPYYGRERGGGGAL 60
           MNPYDHRYADPNSYRERRSDLVG QPAAPPP+ GRES+YKG+ PPPVPYYGRERGGGGAL
Sbjct: 1   MNPYDHRYADPNSYRERRSDLVGPQPAAPPPMAGRESMYKGFHPPPVPYYGRERGGGGAL 60

Query: 61  PNAGGFNAFPRFQPPAGPFNVGRGGSGFGSSGGGRRMFDSGRGGRRTGGNIGSGGGRGGG 120
           PNAGGFN FPRFQPPAGPFN+GR G+ FGS  GGRRMF+SGR     GGN+G GG RGGG
Sbjct: 61  PNAGGFNGFPRFQPPAGPFNIGRSGNDFGS--GGRRMFNSGR-----GGNMGFGGRRGGG 120

Query: 121 TGFDGRGGGRGAGRGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEVKI 180
           TGF+GR GG GAGR GGSSRGDLDNIVLPSQNFG+LVPFEKNFYTECPSVRAMTESEVK+
Sbjct: 121 TGFEGRVGGSGAGR-GGSSRGDLDNIVLPSQNFGDLVPFEKNFYTECPSVRAMTESEVKM 180

Query: 181 YRERHDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRDLI 240
           YRER DIRVEGYDVP+PIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMA+KGRDLI
Sbjct: 181 YRERRDIRVEGYDVPKPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMAMKGRDLI 240

Query: 241 GIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLRAN 300
           GIAETGSGKTLAYLLPALIHISAQPRL HG+GPIVLVLAPTRELAVQIQQE TKFGLRAN
Sbjct: 241 GIAETGSGKTLAYLLPALIHISAQPRLVHGQGPIVLVLAPTRELAVQIQQEVTKFGLRAN 300

Query: 301 IRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLD 360
           IRSTC+YGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNL+RVTYLVLDEADRMLD
Sbjct: 301 IRSTCIYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLQRVTYLVLDEADRMLD 360

Query: 361 MGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSINQ 420
           MGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFL NAYKVIIGS DLKANQSINQ
Sbjct: 361 MGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLHNAYKVIIGSSDLKANQSINQ 420

Query: 421 VVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDKKQ 480
           VVEVLPEAEKYRRLIKLLVEVMDGSR+LIFVETKKGCDKVTRQLRMDGWPALSIHGDKKQ
Sbjct: 421 VVEVLPEAEKYRRLIKLLVEVMDGSRVLIFVETKKGCDKVTRQLRMDGWPALSIHGDKKQ 480

Query: 481 AERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGA 540
           AERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGA
Sbjct: 481 AERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGA 540

Query: 541 KGTAFTFFTHENAKHARDLIKILREAGQIVTPALSALASYSGFGGSGTKFRPQGHRGSFG 600
           KGTAFTFFTHENAKHAR+LIKILREAGQIV+PALSALA+ S  GGS +K+RPQGHRG  G
Sbjct: 541 KGTAFTFFTHENAKHARELIKILREAGQIVSPALSALATSSATGGSSSKYRPQGHRGFGG 600

Query: 601 NRSMVSGSNAIPLGLT 617
           NR+MVSG NAIP+GLT
Sbjct: 601 NRTMVSGPNAIPIGLT 608

[Close]
BLAST of Clc06G18600 vs. TAIR 10
Match: AT5G63120.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 793.9 bits (2049), Expect = 9.4e-230
Identity = 419/627 (66.83%), Postives = 482/627 (76.87%), Query Frame = 0 

Query: 1   MNPYDHRYADPNSYRERRSDLVGLQPAAPPPIVGRESLYKGYQPPPVPYYGRERGGGGA- 60
           M+ YD R+ADPNSYR+R    VG                +   P   PY  R  GGGG  
Sbjct: 1   MSSYDRRFADPNSYRQRSGAPVGSS--------------QPMDPSAAPYNPRYTGGGGGY 60

Query: 61  ------LPNAGGFNAFPRFQPPAGPFNVGRGGSGFGSSGGGRRMFDSGRGGRRTGGNIGS 120
                   +  G+N +P FQPP+G F+VGRGG   G  G G+       G R  GGN G 
Sbjct: 61  GPSPVMAGDNSGYNRYPSFQPPSGGFSVGRGG---GRGGYGQ------YGDRNGGGNWGG 120

Query: 121 GGGRGGGTGFDGRGGGRGAGRGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAM 180
           GGGR                  GGSS+ +LD++ LP QNFGNLV FEKNFY E P+V+AM
Sbjct: 121 GGGR------------------GGSSKRELDSVSLPKQNFGNLVHFEKNFYVESPTVQAM 180

Query: 181 TESEVKIYRERHDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMA 240
           TE +V +YR   DI VEG DVP+P++ FQ+ANFP   L+ IAKLGF EPTPIQAQGWPMA
Sbjct: 181 TEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMA 240

Query: 241 LKGRDLIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEAT 300
           LKGRDLIGIAETGSGKTLAYLLPAL+H+SAQPRL   +GPIVL+LAPTRELAVQIQ+E+ 
Sbjct: 241 LKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIVLILAPTRELAVQIQEESR 300

Query: 301 KFGLRANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLD 360
           KFGLR+ +RSTC+YGGAPKGPQIRDL+ GVEIVIATPGRLIDMLE  HTNL+RVTYLVLD
Sbjct: 301 KFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLD 360

Query: 361 EADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLK 420
           EADRMLDMGFEPQIR IVSQIRPDRQTL WSATWPREVE LARQFLR+ YK IIGS DLK
Sbjct: 361 EADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLK 420

Query: 421 ANQSINQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALS 480
           ANQSINQV+E++P  EKY RL+ LL ++MDGS+ILIFVETK+GCD+VTRQLRMDGWPAL+
Sbjct: 421 ANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALA 480

Query: 481 IHGDKKQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIG 540
           IHGDK Q+ERD VL+EFKSGR+PIMTATDVAARGLDVKDIKCV+NYDFP++LEDY+HRIG
Sbjct: 481 IHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIG 540

Query: 541 RTGRAGAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALSAL--ASYSGFGGS--GTK 600
           RTGRAGAKG AFTFFTH+NAK AR+L+KIL+EAGQ+V P LSAL  +S SG+GGS  G  
Sbjct: 541 RTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQVVPPTLSALVRSSGSGYGGSGGGRN 586

Query: 601 FRPQ--GHRGSFGNRSMVSGSNAIPLG 615
           FRP+  G  G FG++   S SN +P G
Sbjct: 601 FRPRGGGRGGGFGDKRSRSTSNFVPHG 586

[Close]
BLAST of Clc06G18600 vs. TAIR 10
Match: AT1G55150.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 653.3 bits (1684), Expect = 2.0e-187
Identity = 330/505 (65.35%), Postives = 409/505 (80.99%), Query Frame = 0 

Query: 98  FDSGRGGRRTGGNIGSGGGRGGGTGFDGRGGGRGAGRGGGSSRGDLDNIVLPSQ-NFGNL 157
           +DS  G   +  +  S  G GG + +       G+     SS+ D D    P + +   L
Sbjct: 4   YDSRTGDSTSYRDRRSDSGFGGTSSY-------GSSGSHTSSKKDNDGNESPRKLDLDGL 63

Query: 158 VPFEKNFYTECPSVRAMTESEVKIYRERHDIRVEGYDVPRPIRSFQEANFPAYCLDVIAK 217
            PFEKNFY E P+V AMT++EV+ YR+  +I VEG D+P+P++SF++  FP Y L+ + K
Sbjct: 64  TPFEKNFYVESPAVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKK 123

Query: 218 LGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVL 277
            GF EPTPIQ+QGWPMA+KGRDLIGIAETGSGKTL+YLLPA++H++AQP L+HG+GPIVL
Sbjct: 124 AGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIVL 183

Query: 278 VLAPTRELAVQIQQEATKFGLRANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDM 337
           VLAPTRELAVQIQQEA+KFG  + I++TC+YGG PKGPQ+RDL+ GVEIVIATPGRLIDM
Sbjct: 184 VLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM 243

Query: 338 LEAGHTNLRRVTYLVLDEADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLAR 397
           +E+ +TNLRRVTYLVLDEADRMLDMGF+PQIR IVS IRPDRQTLYWSATWP+EVE+L++
Sbjct: 244 MESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSK 303

Query: 398 QFLRNAYKVIIGSPDLKANQSINQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKG 457
           +FL N YKVIIGS DLKAN++I Q+V+V+ E++KY +L+KLL ++MDGSRIL+F++TKKG
Sbjct: 304 KFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKG 363

Query: 458 CDKVTRQLRMDGWPALSIHGDKKQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCV 517
           CD++TRQLRMDGWPALSIHGDK QAERD VLSEF+SG++PIMTATDVAARGLDVKD+K V
Sbjct: 364 CDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYV 423

Query: 518 INYDFPSSLEDYVHRIGRTGRAGAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALSA 577
           INYDFP SLEDYVHRIGRTGRAGAKGTA+TFFT  NA+ A++L  IL+EAGQ V+P L++
Sbjct: 424 INYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELTNILQEAGQKVSPELAS 483

Query: 578 LASYS-----GFGGSGTKFRPQGHR 597
           +   +     G GG    FR +G R
Sbjct: 484 MGRSTAPPPPGLGG----FRDRGSR 497

[Close]
BLAST of Clc06G18600 vs. TAIR 10
Match: AT5G63120.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 653.3 bits (1684), Expect = 2.0e-187
Identity = 344/515 (66.80%), Postives = 392/515 (76.12%), Query Frame = 0 

Query: 1   MNPYDHRYADPNSYRERRSDLVGLQPAAPPPIVGRESLYKGYQPPPVPYYGRERGGGGA- 60
           M+ YD R+ADPNSYR+R    VG                +   P   PY  R  GGGG  
Sbjct: 1   MSSYDRRFADPNSYRQRSGAPVGSS--------------QPMDPSAAPYNPRYTGGGGGY 60

Query: 61  ------LPNAGGFNAFPRFQPPAGPFNVGRGGSGFGSSGGGRRMFDSGRGGRRTGGNIGS 120
                   +  G+N +P FQPP+G F+VGRGG   G  G G+       G R  GGN G 
Sbjct: 61  GPSPVMAGDNSGYNRYPSFQPPSGGFSVGRGG---GRGGYGQ------YGDRNGGGNWGG 120

Query: 121 GGGRGGGTGFDGRGGGRGAGRGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAM 180
           GGGR                  GGSS+ +LD++ LP QNFGNLV FEKNFY E P+V+AM
Sbjct: 121 GGGR------------------GGSSKRELDSVSLPKQNFGNLVHFEKNFYVESPTVQAM 180

Query: 181 TESEVKIYRERHDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMA 240
           TE +V +YR   DI VEG DVP+P++ FQ+ANFP   L+ IAKLGF EPTPIQAQGWPMA
Sbjct: 181 TEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMA 240

Query: 241 LKGRDLIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEAT 300
           LKGRDLIGIAETGSGKTLAYLLPAL+H+SAQPRL   +GPIVL+LAPTRELAVQIQ+E+ 
Sbjct: 241 LKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIVLILAPTRELAVQIQEESR 300

Query: 301 KFGLRANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLD 360
           KFGLR+ +RSTC+YGGAPKGPQIRDL+ GVEIVIATPGRLIDMLE  HTNL+RVTYLVLD
Sbjct: 301 KFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLD 360

Query: 361 EADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLK 420
           EADRMLDMGFEPQIR IVSQIRPDRQTL WSATWPREVE LARQFLR+ YK IIGS DLK
Sbjct: 361 EADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLK 420

Query: 421 ANQSINQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALS 480
           ANQSINQV+E++P  EKY RL+ LL ++MDGS+ILIFVETK+GCD+VTRQLRMDGWPAL+
Sbjct: 421 ANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALA 474

Query: 481 IHGDKKQAERDLVLSEFKSGRNPIMTATDVAARGL 509
           IHGDK Q+ERD VL+EFKSGR+PIMTATDVAARGL
Sbjct: 481 IHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGL 474

[Close]
BLAST of Clc06G18600 vs. TAIR 10
Match: AT3G01540.2 (DEAD box RNA helicase 1 )

HSP 1 Score: 462.2 bits (1188), Expect = 6.4e-130
Identity = 240/439 (54.67%), Postives = 306/439 (69.70%), Query Frame = 0 

Query: 168 PSVRAMTESEVKIYRERHDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQA 227
           PS    +E   + Y  RH+I V G  VP P+ SF+   FP   L  +   GF  PTPIQA
Sbjct: 127 PSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQA 186

Query: 228 QGWPMALKGRDLIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQ 287
           Q WP+A++GRD++ IA+TGSGKTL YL+P  +H+  + R     GP +LVL+PTRELA Q
Sbjct: 187 QSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQ-RIRNDSRMGPTILVLSPTRELATQ 246

Query: 288 IQQEATKFGLRANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRV 347
           IQ+EA KFG  + I  TC+YGGAPKGPQ+RDL+ G +IV+ATPGRL D+LE    +LR++
Sbjct: 247 IQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQI 306

Query: 348 TYLVLDEADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVII 407
           +YLVLDEADRMLDMGFEPQIR IV +I   RQTL ++ATWP+ V K+A   L N  +V I
Sbjct: 307 SYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNI 366

Query: 408 GSPD-LKANQSINQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRM 467
           G+ D L AN+SI Q +EV+   EK RRL ++L     GS+++IF  TK+ CD++TR L  
Sbjct: 367 GNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTR 426

Query: 468 DGWPALSIHGDKKQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLE 527
             + A +IHGDK Q ERD VL++F+SGR P++ ATDVAARGLDVKDI+ V+NYDFP+ +E
Sbjct: 427 Q-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVE 486

Query: 528 DYVHRIGRTGRAGAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALSALASYSGFGGS 587
           DYVHRIGRTGRAGA G AFTFF  +++KHA DLIKIL  A Q V P +  +A+    GG 
Sbjct: 487 DYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATRG--GGG 546

Query: 588 GTKFR----PQGHRGSFGN 602
             KF     P G RG  G+
Sbjct: 547 MNKFSRWGPPSGGRGRGGD 561

[Close]
BLAST of Clc06G18600 vs. TAIR 10
Match: AT3G01540.1 (DEAD box RNA helicase 1 )

HSP 1 Score: 462.2 bits (1188), Expect = 6.4e-130
Identity = 240/439 (54.67%), Postives = 306/439 (69.70%), Query Frame = 0 

Query: 168 PSVRAMTESEVKIYRERHDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQA 227
           PS    +E   + Y  RH+I V G  VP P+ SF+   FP   L  +   GF  PTPIQA
Sbjct: 127 PSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQA 186

Query: 228 QGWPMALKGRDLIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQ 287
           Q WP+A++GRD++ IA+TGSGKTL YL+P  +H+  + R     GP +LVL+PTRELA Q
Sbjct: 187 QSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQ-RIRNDSRMGPTILVLSPTRELATQ 246

Query: 288 IQQEATKFGLRANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRV 347
           IQ+EA KFG  + I  TC+YGGAPKGPQ+RDL+ G +IV+ATPGRL D+LE    +LR++
Sbjct: 247 IQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQI 306

Query: 348 TYLVLDEADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVII 407
           +YLVLDEADRMLDMGFEPQIR IV +I   RQTL ++ATWP+ V K+A   L N  +V I
Sbjct: 307 SYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNI 366

Query: 408 GSPD-LKANQSINQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRM 467
           G+ D L AN+SI Q +EV+   EK RRL ++L     GS+++IF  TK+ CD++TR L  
Sbjct: 367 GNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTR 426

Query: 468 DGWPALSIHGDKKQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLE 527
             + A +IHGDK Q ERD VL++F+SGR P++ ATDVAARGLDVKDI+ V+NYDFP+ +E
Sbjct: 427 Q-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVE 486

Query: 528 DYVHRIGRTGRAGAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALSALASYSGFGGS 587
           DYVHRIGRTGRAGA G AFTFF  +++KHA DLIKIL  A Q V P +  +A+    GG 
Sbjct: 487 DYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATRG--GGG 546

Query: 588 GTKFR----PQGHRGSFGN 602
             KF     P G RG  G+
Sbjct: 547 MNKFSRWGPPSGGRGRGGD 561

The following BLAST results are available for this feature:
BLAST of Clc06G18600 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038879141.10.0e+0096.61DEAD-box ATP-dependent RNA helicase 20-like isoform X1 [Benincasa hispida][more]
XP_008464517.10.0e+0095.49PREDICTED: DEAD-box ATP-dependent RNA helicase 20 isoform X1 [Cucumis melo] >TYJ... [more]
KAA0057824.10.0e+0095.33DEAD-box ATP-dependent RNA helicase 20 isoform X1 [Cucumis melo var. makuwa][more]
XP_004138092.10.0e+0094.85DEAD-box ATP-dependent RNA helicase 20 isoform X1 [Cucumis sativus] >KGN63546.2 ... [more]
XP_022965035.10.0e+0092.21DEAD-box ATP-dependent RNA helicase 20-like [Cucurbita moschata][more]
BLAST of Clc06G18600 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8W4R31.3e-22866.83DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana OX=3702 GN=RH30 P... [more]
Q5N7W47.7e-22166.88DEAD-box ATP-dependent RNA helicase 30 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
Q5QMN31.9e-19069.14DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
Q9C7182.8e-18665.35DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana OX=3702 GN=RH20 P... [more]
Q5B0J91.8e-16960.63ATP-dependent RNA helicase dbp2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38... [more]
BLAST of Clc06G18600 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BJX70.0e+0095.49DEAD-box ATP-dependent RNA helicase 20 isoform X1 OS=Cucumis melo var. makuwa OX... [more]
A0A1S3CLM70.0e+0095.49DEAD-box ATP-dependent RNA helicase 20 isoform X1 OS=Cucumis melo OX=3656 GN=LOC... [more]
A0A5A7URR20.0e+0095.33DEAD-box ATP-dependent RNA helicase 20 isoform X1 OS=Cucumis melo var. makuwa OX... [more]
A0A6J1HMK20.0e+0092.21DEAD-box ATP-dependent RNA helicase 20-like OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1JDK60.0e+0091.40DEAD-box ATP-dependent RNA helicase 20-like OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
BLAST of Clc06G18600 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G63120.29.4e-23066.83P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
AT1G55150.12.0e-18765.35DEA(D/H)-box RNA helicase family protein [more]
AT5G63120.12.0e-18766.80P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
AT3G01540.26.4e-13054.67DEAD box RNA helicase 1 [more]
AT3G01540.16.4e-13054.67DEAD box RNA helicase 1 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 458..539
e-value: 2.1E-32
score: 123.6
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 429..539
e-value: 1.5E-29
score: 102.5
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 433..578
score: 23.69936
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 218..421
e-value: 8.1E-68
score: 241.3
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 230..405
score: 33.049412
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 223..394
e-value: 3.3E-50
score: 170.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 411..578
e-value: 1.2E-54
score: 186.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 163..409
e-value: 2.2E-90
score: 304.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 272..559
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..145
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..41
NoneNo IPR availablePANTHERPTHR47958:SF73LD32873Pcoord: 153..585
NoneNo IPR availablePANTHERPTHR47958ATP-DEPENDENT RNA HELICASE DBP3coord: 153..585
NoneNo IPR availableCDDcd18787SF2_C_DEADcoord: 418..548
e-value: 6.11271E-60
score: 194.263
NoneNo IPR availableCDDcd17966DEADc_DDX5_DDX17coord: 211..405
e-value: 1.27878E-138
score: 399.822
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 351..359
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 199..227
score: 10.624951

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc06G18600.1Clc06G18600.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003724 RNA helicase activity
molecular_function GO:0003676 nucleic acid binding