Clc06G17930 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G17930
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Thiol-disulfide oxidoreductase DCC isoform 1
Location	ClcChr06: 28420866 .. 28424108 (-)
RNA-Seq Expression	Clc06G17930
Synteny	Clc06G17930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATATAACTTGCAACAATTTAGTATTTTATAACTTTAATAAAAGTTTACATCACTAAATATTATGTATTGGAATTGAAATACGAGTGGATTGTGGGTAGCCACGCGTTTAAGCATGCAAGGAAGAAGAAGCAGTTACGAATCAGCTGCTGCATCTTGCTTAAGCCTTCAAATGCAAACCACAAACGAGAAAAGAAACTAGAACATGGCGTTTGGAGGAGCAGCTACCACTGCCATGGCGTCCAAATTTGCAGCAAGGATCATCAATCCAATTCGACTCTCATCCTCTCACCTTCCTAACCTCAGCCTCCATCGCACTCCAATGCTTCAGCTTCATCCACAACCCTTCTCCCCATTTCAAATCAATCAACCCGGTAAGATTCGTTCTCGACTCTCCCTCTATTAGCGAATCCCCTTTTACTTTTTCTTTCCATTTTAATGATGTTCATGAAGTAATTTTTGAGATGGACAACTTCTTGTTTGAATCGCTGGAGAGATGGTTTGATTAATTGCATGTTCGTCTGTGCGCCTTTTGCGGATTGACCTAACGGAGAATATGATTAATGGGTTTAAGGGGGTTATTTTCAAAAGATTAGTCTCATCAAATGAAATTAGCTACTCTAGGAAAATGACACACCACAATCTGTTAAGTCTCCCCGATGATTGATGAACAATGCAGGATTGAAATACCAAATTCGCGCTATAAGTGAAGCTGTAGTAGATCCTGTTTCTTCGAATAAAGAGAATGGAGAACGATCACCTCAAAGTTGGAAGATTAAAATGCTTTATGATGGAGATTGCCCACTCTGCATGCGTGAGGTTGTACTGAGATCTCATATTCACTTTCAAATTATGCCTTTAGGGATCGTTCTTTGATGGTGCAAGAGATTTTGGCCTTTTAAATTGTTGTTCGATGTTCTATGTTTGTCTCATTATCTGCGAGTTCATGGTACTGATAGGTTAATATGCTAAGAGAGAGGAATAAGCAGTATGGTACAATCAAGTTTGTTGACATTAGTTCAGATGATTACAAGCCAGAAGAAAATCAGGGTCTTGACTACAAAACCGTAAGATTTTGATTATTTTTGTTTTTCGAATGTTAAGAAGTCAATTATCTGATTTTGAAAGAGGTTTAGAGAGATAACAAGATGATGAATCATGCTTGATACTAACATTACTGGATTTTGGATGGTATTAACCCCATGAACTGTAGATACATCATTATACCCTTTCCTCCTTCACTCTGAATTTTGTGAAATTCAAAGACCTTCTGAGTGCATAGGAGTGTCTGTAAGGAAATCTCTAGAAGAAAAAGTTCTCATTATTGGACTAAAAGGAAATCAAACAACTATTAACTAGAACTACTTTCTAGATAACGTAGAATGCATATTATATGACAATTTATATTCTTGTCCTGCAAGTTTTGAAGTTTTTCACCTTCTATTTTCATTTAGGTTATGGGAAGAATCCATGCGATCCTTGCAGATGGTACCGTGGTCAGAGATGTTGAAGTATGCTCCCTTTTTTGTTCCTTTTGTTGTTCTAATTTAGATCCAAAATTATGATTATATCATGGTCTGCTGTTGGGTCATTCATTGTTCAAGGTGATCATTCCAAAAAATATGCCTTTTCCCTTCTTTTTTTTTCTTTTTTTCTTTTTTTTTTTTGCGTGTGTGTTTGCGCGCGCTTCGACTTATATCAACCGCAGACTCATTATTTCTCAGCTATTGATCATGTAATACTGATCTTGCTCAGATATTAGATGGTTAACATCCTTTAGAAAACATATTTACTCAATAGATACTGTCTTTTTCCCCCTACTGCTTCTTTTGCAGGCCTTTAGAAGACTTTATGAACAAGTTAATCTTGGATGGGTATATGCTGTTACAAAATATGAACCAGTAAGTCCTTTCAAGCTTATTTGATCTTTCATCCATCTGTTCCTCCAGAAGCAATTTTTATCCGATGGACTCTGATCTCTTAATTGCTAATGATTAGCTTATTGTCCACAGTTTGGAACATTAGCTGATTTCGCATATGGTATATGGGCGAGGTATCGTCTTCAGTTGACAGGTGAAACACGAACAAGAGATTTTTAGATCATATAATTACTACGCATATATGGGATCCCACAGACCATGTCCAGGAGTATAAAGCATAACTCCGTATGTATGTCTTGTATTATGTAGCTACATGTCTCACACATCCAAACCAGTCTTCTTGTGTCTAGAATGTATTGCATGGTCAATGGATTCTCAGCCTTGAAAGTATCCCCATAAATATGCATTTATTGACTAATTCAAAATGCTGTTTACTCCTTCAAAAATCAATTTGTAGCTACCATTAACAAAACTCGTAAGTCTTGAAGTTCTTGATGCCTTTACAGCATGGTTGTGATCTCTAAATTTTTTTCATGCTATTTGGTTTCAGGCCGGCCACCTCTAGAAGATATTCTGGTAGCACGAAAGAAAAACCAGGTAAATTTTTGTGCTTGTTATGAACTTTGTATTTATTTATTTATTTATTTATTTTATTTGTCTTTCCCTTGTGGTCCACACGAGGTATGTCCACCAGTTTTAACTTTTAAGAATGAGTTTCTCACAAAAAAGAATTTTGGCCCATCTTTTATGGGCTTGCTGACACAAAAATACAATAGTAATCTTGACATATTTATATACACTTGCATACGTGTTGGGCTTTCTGTTTTCTGCACAGGATGAAGTATGTAACGACAGCAATACTTGCAAGAGGTAATCCTTCTGCACAGGATGATGATTCTCGCTTGGCTGGTTGGTCACCAGAAAGGGGTGGGAAAGGACGTAATTCATTTAAAAGGCCAGTAGCTCCTCTTACATTTTTGTATACATGAATGTCTAATAGGCTCATAGCAATACTTTTTTTCCTTTTTTACAACATTGTGGGGTGGGAGATCTCCTATGATCTTGAGATCGATAATACAATATTAAAAATGTACTTAGGTAAAAATTAGAGGCACTTCTTCCCAGCTCCCTGTACTGAATAAGGTCGTTGCTTTTCCTAATGAAATATATTGGTGTATGCTTCTAACAGAATGCCAATGAAAATCCTAACACTATACAATTTCATCGTGCTGGTTCCTTTGTGTTATTATATATATAATATATATATATATATTGGGTCAAATTTCTGAGTTTAGAATATATACGTCATTAGGAAATTTATACCGTTTTATATTATGGGGTGTTGGGGTGTTTACTGTATCTTCT

mRNA sequence

TATATAACTTGCAACAATTTAGTATTTTATAACTTTAATAAAAGTTTACATCACTAAATATTATGTATTGGAATTGAAATACGAGTGGATTGTGGGTAGCCACGCGTTTAAGCATGCAAGGAAGAAGAAGCAGTTACGAATCAGCTGCTGCATCTTGCTTAAGCCTTCAAATGCAAACCACAAACGAGAAAAGAAACTAGAACATGGCGTTTGGAGGAGCAGCTACCACTGCCATGGCGTCCAAATTTGCAGCAAGGATCATCAATCCAATTCGACTCTCATCCTCTCACCTTCCTAACCTCAGCCTCCATCGCACTCCAATGCTTCAGCTTCATCCACAACCCTTCTCCCCATTTCAAATCAATCAACCCGGATTGAAATACCAAATTCGCGCTATAAGTGAAGCTGTAGTAGATCCTGTTTCTTCGAATAAAGAGAATGGAGAACGATCACCTCAAAGTTGGAAGATTAAAATGCTTTATGATGGAGATTGCCCACTCTGCATGCGTGAGGTTAATATGCTAAGAGAGAGGAATAAGCAGTATGGTACAATCAAGTTTGTTGACATTAGTTCAGATGATTACAAGCCAGAAGAAAATCAGGGTCTTGACTACAAAACCGTTATGGGAAGAATCCATGCGATCCTTGCAGATGGTACCGTGGTCAGAGATGTTGAAGCCTTTAGAAGACTTTATGAACAAGTTAATCTTGGATGGGTATATGCTGTTACAAAATATGAACCATTTGGAACATTAGCTGATTTCGCATATGGTATATGGGCGAGGTATCGTCTTCAGTTGACAGGCCGGCCACCTCTAGAAGATATTCTGGTAGCACGAAAGAAAAACCAGGATGAAGTATGTAACGACAGCAATACTTGCAAGAGGTAATCCTTCTGCACAGGATGATGATTCTCGCTTGGCTGGTTGGTCACCAGAAAGGGGTGGGAAAGGACGTAATTCATTTAAAAGGCCAGTAGCTCCTCTTACATTTTTGTATACATGAATGTCTAATAGGCTCATAGCAATACTTTTTTTCCTTTTTTACAACATTGTGGGGTGGGAGATCTCCTATGATCTTGAGATCGATAATACAATATTAAAAATGTACTTAGGTAAAAATTAGAGGCACTTCTTCCCAGCTCCCTGTACTGAATAAGGTCGTTGCTTTTCCTAATGAAATATATTGGTGTATGCTTCTAACAGAATGCCAATGAAAATCCTAACACTATACAATTTCATCGTGCTGGTTCCTTTGTGTTATTATATATATAATATATATATATATATTGGGTCAAATTTCTGAGTTTAGAATATATACGTCATTAGGAAATTTATACCGTTTTATATTATGGGGTGTTGGGGTGTTTACTGTATCTTCT

Coding sequence (CDS)

ATGGCGTTTGGAGGAGCAGCTACCACTGCCATGGCGTCCAAATTTGCAGCAAGGATCATCAATCCAATTCGACTCTCATCCTCTCACCTTCCTAACCTCAGCCTCCATCGCACTCCAATGCTTCAGCTTCATCCACAACCCTTCTCCCCATTTCAAATCAATCAACCCGGATTGAAATACCAAATTCGCGCTATAAGTGAAGCTGTAGTAGATCCTGTTTCTTCGAATAAAGAGAATGGAGAACGATCACCTCAAAGTTGGAAGATTAAAATGCTTTATGATGGAGATTGCCCACTCTGCATGCGTGAGGTTAATATGCTAAGAGAGAGGAATAAGCAGTATGGTACAATCAAGTTTGTTGACATTAGTTCAGATGATTACAAGCCAGAAGAAAATCAGGGTCTTGACTACAAAACCGTTATGGGAAGAATCCATGCGATCCTTGCAGATGGTACCGTGGTCAGAGATGTTGAAGCCTTTAGAAGACTTTATGAACAAGTTAATCTTGGATGGGTATATGCTGTTACAAAATATGAACCATTTGGAACATTAGCTGATTTCGCATATGGTATATGGGCGAGGTATCGTCTTCAGTTGACAGGCCGGCCACCTCTAGAAGATATTCTGGTAGCACGAAAGAAAAACCAGGATGAAGTATGTAACGACAGCAATACTTGCAAGAGGTAA

Protein sequence

MAFGGAATTAMASKFAARIINPIRLSSSHLPNLSLHRTPMLQLHPQPFSPFQINQPGLKYQIRAISEAVVDPVSSNKENGERSPQSWKIKMLYDGDCPLCMREVNMLRERNKQYGTIKFVDISSDDYKPEENQGLDYKTVMGRIHAILADGTVVRDVEAFRRLYEQVNLGWVYAVTKYEPFGTLADFAYGIWARYRLQLTGRPPLEDILVARKKNQDEVCNDSNTCKR

Homology

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BLAST of Clc06G17930 vs. NCBI nr
Match: XP_038878377.1 (uncharacterized protein At5g50100, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 412.9 bits (1060), Expect = 1.8e-111
Identity = 203/228 (89.04%), Postives = 208/228 (91.23%), Query Frame = 0


Query: 1   MAFGGAATTAMASKFAARIINPIRLSSSHLPNLSLHRTPMLQLHPQPFSPFQINQPGLKY 60
           MAFGGAA TAM SKFAARI NPIRLSSS LP L LHRTP+  LHPQPFSPF  NQPGLKY
Sbjct: 1   MAFGGAAATAMTSKFAARITNPIRLSSSQLPKLGLHRTPV--LHPQPFSPFPTNQPGLKY 60

Query: 61  QIRAISEAVVDPVSSNKENGERSPQSWKIKMLYDGDCPLCMREVNMLRERNKQYGTIKFV 120
           QIRAISEA VDPVSSNKE GERS QSWKIKMLYDGDCPLCMREVNMLRERNKQYGTIKFV
Sbjct: 61  QIRAISEAAVDPVSSNKEKGERSLQSWKIKMLYDGDCPLCMREVNMLRERNKQYGTIKFV 120

Query: 121 DISSDDYKPEENQGLDYKTVMGRIHAILADGTVVRDVEAFRRLYEQVNLGWVYAVTKYEP 180
           DISSDDY PEENQGLDYKTVMGRIHAILADGTVVRDVEAFR+LYEQV+LGWVYAVTKYEP
Sbjct: 121 DISSDDYSPEENQGLDYKTVMGRIHAILADGTVVRDVEAFRKLYEQVDLGWVYAVTKYEP 180

Query: 181 FGTLADFAYGIWARYRLQLTGRPPLEDILVARKKNQDEVCNDSNTCKR 229
           FG LAD AY +WARYRLQLTGRPPLEDIL ARKKNQ+ VCNDSN CKR
Sbjct: 181 FGRLADAAYSLWARYRLQLTGRPPLEDILAARKKNQEGVCNDSNACKR 226

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BLAST of Clc06G17930 vs. NCBI nr
Match: XP_038878376.1 (uncharacterized protein At5g50100, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 392.5 bits (1007), Expect = 2.5e-105
Identity = 194/216 (89.81%), Postives = 198/216 (91.67%), Query Frame = 0


Query: 1   MAFGGAATTAMASKFAARIINPIRLSSSHLPNLSLHRTPMLQLHPQPFSPFQINQPGLKY 60
           MAFGGAA TAM SKFAARI NPIRLSSS LP L LHRTP+  LHPQPFSPF  NQPGLKY
Sbjct: 1   MAFGGAAATAMTSKFAARITNPIRLSSSQLPKLGLHRTPV--LHPQPFSPFPTNQPGLKY 60

Query: 61  QIRAISEAVVDPVSSNKENGERSPQSWKIKMLYDGDCPLCMREVNMLRERNKQYGTIKFV 120
           QIRAISEA VDPVSSNKE GERS QSWKIKMLYDGDCPLCMREVNMLRERNKQYGTIKFV
Sbjct: 61  QIRAISEAAVDPVSSNKEKGERSLQSWKIKMLYDGDCPLCMREVNMLRERNKQYGTIKFV 120

Query: 121 DISSDDYKPEENQGLDYKTVMGRIHAILADGTVVRDVEAFRRLYEQVNLGWVYAVTKYEP 180
           DISSDDY PEENQGLDYKTVMGRIHAILADGTVVRDVEAFR+LYEQV+LGWVYAVTKYEP
Sbjct: 121 DISSDDYSPEENQGLDYKTVMGRIHAILADGTVVRDVEAFRKLYEQVDLGWVYAVTKYEP 180

Query: 181 FGTLADFAYGIWARYRLQLTGRPPLEDILVARKKNQ 217
           FG LAD AY +WARYRLQLTGRPPLEDIL ARKKNQ
Sbjct: 181 FGRLADAAYSLWARYRLQLTGRPPLEDILAARKKNQ 214

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BLAST of Clc06G17930 vs. NCBI nr
Match: XP_022972940.1 (uncharacterized protein At5g50100, chloroplastic [Cucurbita maxima])

HSP 1 Score: 387.1 bits (993), Expect = 1.0e-103
Identity = 193/230 (83.91%), Postives = 204/230 (88.70%), Query Frame = 0


Query: 1   MAFGGAAT---TAMASKFAARIINPIRLSSSHLPNLSLHRTPMLQLHPQPFSPFQINQPG 60
           MAFG AAT   TAMASKFA RI NPIRLS+S LP L LHRTP+L   PQPFS F  NQP 
Sbjct: 1   MAFGAAATATATAMASKFAGRIGNPIRLSTSQLPKLRLHRTPLLL--PQPFSAFWTNQPR 60

Query: 61  LKYQIRAISEAVVDPVSSNKENGERSPQSWKIKMLYDGDCPLCMREVNMLRERNKQYGTI 120
           LK+QI AISE+ VDPVSSN+E+GERSP+SWKIKMLYDGDCPLCMREVNMLRERNK+YGTI
Sbjct: 61  LKFQICAISESAVDPVSSNREHGERSPESWKIKMLYDGDCPLCMREVNMLRERNKRYGTI 120

Query: 121 KFVDISSDDYKPEENQGLDYKTVMGRIHAILADGTVVRDVEAFRRLYEQVNLGWVYAVTK 180
           KFVDISSDDY PEENQGLDYKTVMGRIHAILADGTVVRDVE FRRLYEQV LGWVYAVTK
Sbjct: 121 KFVDISSDDYTPEENQGLDYKTVMGRIHAILADGTVVRDVEVFRRLYEQVGLGWVYAVTK 180

Query: 181 YEPFGTLADFAYGIWARYRLQLTGRPPLEDILVARKKNQDEVCNDSNTCK 228
           YEP GTLAD  YG+WA+YRLQLTGRPPLEDILVARKKN+DEVCNDS  CK
Sbjct: 181 YEPVGTLADAVYGLWAKYRLQLTGRPPLEDILVARKKNKDEVCNDSKACK 228

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BLAST of Clc06G17930 vs. NCBI nr
Match: XP_023530421.1 (uncharacterized protein At5g50100, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 387.1 bits (993), Expect = 1.0e-103
Identity = 192/230 (83.48%), Postives = 205/230 (89.13%), Query Frame = 0


Query: 1   MAFGGAAT---TAMASKFAARIINPIRLSSSHLPNLSLHRTPMLQLHPQPFSPFQINQPG 60
           MAFG AAT   TAMASKFA RI NPIRLS+S LP L LHRTP+L   PQPFS F+ NQP 
Sbjct: 1   MAFGAAATATATAMASKFAGRIGNPIRLSTSRLPKLRLHRTPLLL--PQPFSAFRTNQPR 60

Query: 61  LKYQIRAISEAVVDPVSSNKENGERSPQSWKIKMLYDGDCPLCMREVNMLRERNKQYGTI 120
           LK+QI AISE+ VDPVSSN+E+GERSP+SWKIKMLYDGDCPLCMREVNMLRERNK+YGTI
Sbjct: 61  LKFQICAISESAVDPVSSNREHGERSPESWKIKMLYDGDCPLCMREVNMLRERNKRYGTI 120

Query: 121 KFVDISSDDYKPEENQGLDYKTVMGRIHAILADGTVVRDVEAFRRLYEQVNLGWVYAVTK 180
           KFVDISSDDY PEENQGLDYKTVMGRIHAILADGTVV+DVE FRRLYEQV LGWVYAVTK
Sbjct: 121 KFVDISSDDYTPEENQGLDYKTVMGRIHAILADGTVVKDVEVFRRLYEQVGLGWVYAVTK 180

Query: 181 YEPFGTLADFAYGIWARYRLQLTGRPPLEDILVARKKNQDEVCNDSNTCK 228
           YEP GTLAD  YG+WA+YRLQLTGRPPLEDILVARKKN+DEVCNDS  CK
Sbjct: 181 YEPVGTLADAVYGLWAKYRLQLTGRPPLEDILVARKKNKDEVCNDSKACK 228

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BLAST of Clc06G17930 vs. NCBI nr
Match: XP_022924663.1 (uncharacterized protein At5g50100, mitochondrial [Cucurbita moschata])

HSP 1 Score: 386.0 bits (990), Expect = 2.3e-103
Identity = 192/230 (83.48%), Postives = 205/230 (89.13%), Query Frame = 0


Query: 1   MAFGGAAT---TAMASKFAARIINPIRLSSSHLPNLSLHRTPMLQLHPQPFSPFQINQPG 60
           MAFG AAT   TAMASKFA RI NPIRLS+S LPNL LHRTP+L   PQ FS F+ NQP 
Sbjct: 1   MAFGAAATATATAMASKFAGRIGNPIRLSTSRLPNLRLHRTPLLL--PQSFSAFRTNQPR 60

Query: 61  LKYQIRAISEAVVDPVSSNKENGERSPQSWKIKMLYDGDCPLCMREVNMLRERNKQYGTI 120
           LK+QI AISE+ VDPVSSN+E+GERSP+SWKIKMLYDGDCPLCMREVNMLRERNK+YGTI
Sbjct: 61  LKFQICAISESAVDPVSSNREHGERSPESWKIKMLYDGDCPLCMREVNMLRERNKRYGTI 120

Query: 121 KFVDISSDDYKPEENQGLDYKTVMGRIHAILADGTVVRDVEAFRRLYEQVNLGWVYAVTK 180
           KFVDISSDDY PEENQGLDY+TVMGRIHAILADGTVVRDVE FRRLYEQV LGWVYAVTK
Sbjct: 121 KFVDISSDDYTPEENQGLDYETVMGRIHAILADGTVVRDVEVFRRLYEQVGLGWVYAVTK 180

Query: 181 YEPFGTLADFAYGIWARYRLQLTGRPPLEDILVARKKNQDEVCNDSNTCK 228
           YEP GTLAD  YG+WA+YRLQLTGRPPLEDILVARKKN+DEVCNDS  CK
Sbjct: 181 YEPVGTLADAVYGLWAKYRLQLTGRPPLEDILVARKKNKDEVCNDSKACK 228

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BLAST of Clc06G17930 vs. ExPASy Swiss-Prot
Match: Q8W485 (Uncharacterized protein At5g50100, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g50100 PE=1 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 3.6e-67
Identity = 123/195 (63.08%), Postives = 149/195 (76.41%), Query Frame = 0


Query: 37  RTPMLQLHPQPFSP---FQINQPGLKYQIRAISEAVVDPVSSNKENGER-SPQSWKIKML 96
           R P L+   + F+P    +I   G KYQ+RAI     DPV +  +N E   PQ+WKIKML
Sbjct: 19  RNPSLRSLSRHFNPNFNHRIIPTGFKYQVRAIQGTSTDPVITPLKNREEPKPQNWKIKML 78

Query: 97  YDGDCPLCMREVNMLRERNKQYGTIKFVDISSDDYKPEENQGLDYKTVMGRIHAILADGT 156
           YDGDCPLCMREVNML ERN+++GTIKFVDISS+DY PE+NQGLDYKTVMG+IHAI +DG 
Sbjct: 79  YDGDCPLCMREVNMLMERNEKHGTIKFVDISSNDYSPEDNQGLDYKTVMGQIHAIQSDGN 138

Query: 157 VVRDVEAFRRLYEQVNLGWVYAVTKYEPFGTLADFAYGIWARYRLQLTGRPPLEDILVAR 216
           VV+ VEAFRRLYE+V LGWVY +TK+EP G LAD  Y +WA+YRLQ+TGRP +E IL AR
Sbjct: 139 VVKGVEAFRRLYEEVGLGWVYTITKFEPIGKLADVVYDVWAKYRLQVTGRPSIEAILEAR 198

Query: 217 KKNQDEVCNDSNTCK 228
           KK++ E C +S  CK
Sbjct: 199 KKDKVETCGESKNCK 213

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BLAST of Clc06G17930 vs. ExPASy TrEMBL
Match: A0A6J1IA19 (uncharacterized protein At5g50100, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111471442 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 5.0e-104
Identity = 193/230 (83.91%), Postives = 204/230 (88.70%), Query Frame = 0


Query: 1   MAFGGAAT---TAMASKFAARIINPIRLSSSHLPNLSLHRTPMLQLHPQPFSPFQINQPG 60
           MAFG AAT   TAMASKFA RI NPIRLS+S LP L LHRTP+L   PQPFS F  NQP 
Sbjct: 1   MAFGAAATATATAMASKFAGRIGNPIRLSTSQLPKLRLHRTPLLL--PQPFSAFWTNQPR 60

Query: 61  LKYQIRAISEAVVDPVSSNKENGERSPQSWKIKMLYDGDCPLCMREVNMLRERNKQYGTI 120
           LK+QI AISE+ VDPVSSN+E+GERSP+SWKIKMLYDGDCPLCMREVNMLRERNK+YGTI
Sbjct: 61  LKFQICAISESAVDPVSSNREHGERSPESWKIKMLYDGDCPLCMREVNMLRERNKRYGTI 120

Query: 121 KFVDISSDDYKPEENQGLDYKTVMGRIHAILADGTVVRDVEAFRRLYEQVNLGWVYAVTK 180
           KFVDISSDDY PEENQGLDYKTVMGRIHAILADGTVVRDVE FRRLYEQV LGWVYAVTK
Sbjct: 121 KFVDISSDDYTPEENQGLDYKTVMGRIHAILADGTVVRDVEVFRRLYEQVGLGWVYAVTK 180

Query: 181 YEPFGTLADFAYGIWARYRLQLTGRPPLEDILVARKKNQDEVCNDSNTCK 228
           YEP GTLAD  YG+WA+YRLQLTGRPPLEDILVARKKN+DEVCNDS  CK
Sbjct: 181 YEPVGTLADAVYGLWAKYRLQLTGRPPLEDILVARKKNKDEVCNDSKACK 228

[Close]

BLAST of Clc06G17930 vs. ExPASy TrEMBL
Match: A0A6J1ED50 (uncharacterized protein At5g50100, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111432094 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.1e-103
Identity = 192/230 (83.48%), Postives = 205/230 (89.13%), Query Frame = 0


Query: 1   MAFGGAAT---TAMASKFAARIINPIRLSSSHLPNLSLHRTPMLQLHPQPFSPFQINQPG 60
           MAFG AAT   TAMASKFA RI NPIRLS+S LPNL LHRTP+L   PQ FS F+ NQP 
Sbjct: 1   MAFGAAATATATAMASKFAGRIGNPIRLSTSRLPNLRLHRTPLLL--PQSFSAFRTNQPR 60

Query: 61  LKYQIRAISEAVVDPVSSNKENGERSPQSWKIKMLYDGDCPLCMREVNMLRERNKQYGTI 120
           LK+QI AISE+ VDPVSSN+E+GERSP+SWKIKMLYDGDCPLCMREVNMLRERNK+YGTI
Sbjct: 61  LKFQICAISESAVDPVSSNREHGERSPESWKIKMLYDGDCPLCMREVNMLRERNKRYGTI 120

Query: 121 KFVDISSDDYKPEENQGLDYKTVMGRIHAILADGTVVRDVEAFRRLYEQVNLGWVYAVTK 180
           KFVDISSDDY PEENQGLDY+TVMGRIHAILADGTVVRDVE FRRLYEQV LGWVYAVTK
Sbjct: 121 KFVDISSDDYTPEENQGLDYETVMGRIHAILADGTVVRDVEVFRRLYEQVGLGWVYAVTK 180

Query: 181 YEPFGTLADFAYGIWARYRLQLTGRPPLEDILVARKKNQDEVCNDSNTCK 228
           YEP GTLAD  YG+WA+YRLQLTGRPPLEDILVARKKN+DEVCNDS  CK
Sbjct: 181 YEPVGTLADAVYGLWAKYRLQLTGRPPLEDILVARKKNKDEVCNDSKACK 228

[Close]

BLAST of Clc06G17930 vs. ExPASy TrEMBL
Match: A0A1S3BWL4 (uncharacterized protein At5g50100, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103493933 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 2.8e-102
Identity = 191/230 (83.04%), Postives = 199/230 (86.52%), Query Frame = 0


Query: 1   MAFGGAATTAMASKFAARIINPIRL-SSSHLPNLSLHRTPMLQLHPQPFSPFQ-INQPGL 60
           MAFGGAA TAMASKF   I +PIRL SSSHLP L LH T       +PFSPF+  NQ GL
Sbjct: 1   MAFGGAAATAMASKFTTTITSPIRLISSSHLPKLGLHST-------RPFSPFRTTNQLGL 60

Query: 61  KYQIRAISEAVVDPVSSNKENGERSPQSWKIKMLYDGDCPLCMREVNMLRERNKQYGTIK 120
           KYQ+RAISEA+VDPVSSNKENGE S QSWKIKMLYDGDCPLCMREVNMLRERNKQYGTI 
Sbjct: 61  KYQVRAISEAIVDPVSSNKENGEGSSQSWKIKMLYDGDCPLCMREVNMLRERNKQYGTIT 120

Query: 121 FVDISSDDYKPEENQGLDYKTVMGRIHAILADGTVVRDVEAFRRLYEQVNLGWVYAVTKY 180
           FVDISSDDY PEENQGLDYKTVMGRIHAILADGTVVRDVE FRRLYEQV LGWVYA+TKY
Sbjct: 121 FVDISSDDYTPEENQGLDYKTVMGRIHAILADGTVVRDVEVFRRLYEQVGLGWVYAITKY 180

Query: 181 EPFGTLADFAYGIWARYRLQLTGRPPLEDILVARKKNQDEVCNDSNTCKR 229
           EP G L D AYG+WARYRLQLTGRPPLEDIL ARKKNQDE+CNDSN CKR
Sbjct: 181 EPVGRLVDAAYGLWARYRLQLTGRPPLEDILAARKKNQDEICNDSNACKR 223

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BLAST of Clc06G17930 vs. ExPASy TrEMBL
Match: A0A0A0LS53 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005680 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.4e-101
Identity = 193/230 (83.91%), Postives = 198/230 (86.09%), Query Frame = 0


Query: 1   MAFGGAATTAMASKFAARIINPIRL-SSSHLPNLSLHRTPMLQLHPQPFSPFQ-INQPGL 60
           MAFGGAA  AMASKFA  I  PIRL  SSHLP L  H T       Q FSPF+  NQ GL
Sbjct: 1   MAFGGAAAPAMASKFATTITTPIRLIPSSHLPKLGRHST-------QLFSPFRTTNQLGL 60

Query: 61  KYQIRAISEAVVDPVSSNKENGERSPQSWKIKMLYDGDCPLCMREVNMLRERNKQYGTIK 120
           KYQIRAISEAVVDPVSSNKENGE S QSWKIKMLYDGDCPLCMREVNMLRERNKQYGTIK
Sbjct: 61  KYQIRAISEAVVDPVSSNKENGEGSSQSWKIKMLYDGDCPLCMREVNMLRERNKQYGTIK 120

Query: 121 FVDISSDDYKPEENQGLDYKTVMGRIHAILADGTVVRDVEAFRRLYEQVNLGWVYAVTKY 180
           FVDI SDDY P+ENQGLDYKTVMGRIHAILADGTVVRDVEAFR+LYEQV LGWVYAVTKY
Sbjct: 121 FVDIGSDDYTPQENQGLDYKTVMGRIHAILADGTVVRDVEAFRKLYEQVGLGWVYAVTKY 180

Query: 181 EPFGTLADFAYGIWARYRLQLTGRPPLEDILVARKKNQDEVCNDSNTCKR 229
           EPFG LAD AYG+WARYRLQLTGRPPLEDIL ARKKNQDE+CNDSN CKR
Sbjct: 181 EPFGRLADAAYGLWARYRLQLTGRPPLEDILAARKKNQDEICNDSNACKR 223

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BLAST of Clc06G17930 vs. ExPASy TrEMBL
Match: A0A5A7URW2 (Thiol-disulfide oxidoreductase DCC isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001900 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 7.8e-97
Identity = 184/222 (82.88%), Postives = 192/222 (86.49%), Query Frame = 0


Query: 1   MAFGGAATTAMASKFAARIINPIRL-SSSHLPNLSLHRTPMLQLHPQPFSPFQ-INQPGL 60
           MAFGGAA TAMASKF   I +PIRL SSSHLP L LH T       +PFSPF+  NQ GL
Sbjct: 1   MAFGGAAATAMASKFTTTITSPIRLISSSHLPKLGLHST-------RPFSPFRTTNQLGL 60

Query: 61  KYQIRAISEAVVDPVSSNKENGERSPQSWKIKMLYDGDCPLCMREVNMLRERNKQYGTIK 120
           KYQ+RAISEA+VDPVSSNKENGE S QSWKIKMLYDGDCPLCMREVNMLRERNKQYGTI 
Sbjct: 61  KYQVRAISEAIVDPVSSNKENGEGSSQSWKIKMLYDGDCPLCMREVNMLRERNKQYGTIT 120

Query: 121 FVDISSDDYKPEENQGLDYKTVMGRIHAILADGTVVRDVEAFRRLYEQVNLGWVYAVTKY 180
           FVDISSDDY PEENQGLDYKTVMGRIHAILADGTVVRDVEAFRRLYEQV LGWVYA+TKY
Sbjct: 121 FVDISSDDYTPEENQGLDYKTVMGRIHAILADGTVVRDVEAFRRLYEQVGLGWVYAITKY 180

Query: 181 EPFGTLADFAYGIWARYRLQLTGRPPLEDILVARKKNQDEVC 221
           EP G LAD AYG+WARYRLQLTGRPPLEDIL ARKKNQ  +C
Sbjct: 181 EPVGRLADAAYGLWARYRLQLTGRPPLEDILAARKKNQVNLC 215

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BLAST of Clc06G17930 vs. TAIR 10
Match: AT5G50100.1 (Putative thiol-disulphide oxidoreductase DCC )

HSP 1 Score: 256.1 bits (653), Expect = 2.6e-68
Identity = 123/195 (63.08%), Postives = 149/195 (76.41%), Query Frame = 0


Query: 37  RTPMLQLHPQPFSP---FQINQPGLKYQIRAISEAVVDPVSSNKENGER-SPQSWKIKML 96
           R P L+   + F+P    +I   G KYQ+RAI     DPV +  +N E   PQ+WKIKML
Sbjct: 19  RNPSLRSLSRHFNPNFNHRIIPTGFKYQVRAIQGTSTDPVITPLKNREEPKPQNWKIKML 78

Query: 97  YDGDCPLCMREVNMLRERNKQYGTIKFVDISSDDYKPEENQGLDYKTVMGRIHAILADGT 156
           YDGDCPLCMREVNML ERN+++GTIKFVDISS+DY PE+NQGLDYKTVMG+IHAI +DG 
Sbjct: 79  YDGDCPLCMREVNMLMERNEKHGTIKFVDISSNDYSPEDNQGLDYKTVMGQIHAIQSDGN 138

Query: 157 VVRDVEAFRRLYEQVNLGWVYAVTKYEPFGTLADFAYGIWARYRLQLTGRPPLEDILVAR 216
           VV+ VEAFRRLYE+V LGWVY +TK+EP G LAD  Y +WA+YRLQ+TGRP +E IL AR
Sbjct: 139 VVKGVEAFRRLYEEVGLGWVYTITKFEPIGKLADVVYDVWAKYRLQVTGRPSIEAILEAR 198

Query: 217 KKNQDEVCNDSNTCK 228
           KK++ E C +S  CK
Sbjct: 199 KKDKVETCGESKNCK 213

The following BLAST results are available for this feature:

BLAST of Clc06G17930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878377.1	1.8e-111	89.04	uncharacterized protein At5g50100, chloroplastic isoform X2 [Benincasa hispida]	[more]
XP_038878376.1	2.5e-105	89.81	uncharacterized protein At5g50100, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_022972940.1	1.0e-103	83.91	uncharacterized protein At5g50100, chloroplastic [Cucurbita maxima]	[more]
XP_023530421.1	1.0e-103	83.48	uncharacterized protein At5g50100, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022924663.1	2.3e-103	83.48	uncharacterized protein At5g50100, mitochondrial [Cucurbita moschata]	[more]

BLAST of Clc06G17930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W485	3.6e-67	63.08	Uncharacterized protein At5g50100, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Clc06G17930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IA19	5.0e-104	83.91	uncharacterized protein At5g50100, chloroplastic OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1ED50	1.1e-103	83.48	uncharacterized protein At5g50100, mitochondrial OS=Cucurbita moschata OX=3662 G...	[more]
A0A1S3BWL4	2.8e-102	83.04	uncharacterized protein At5g50100, mitochondrial OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A0A0LS53	1.4e-101	83.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005680 PE=4 SV=1	[more]
A0A5A7URW2	7.8e-97	82.88	Thiol-disulfide oxidoreductase DCC isoform 1 OS=Cucumis melo var. makuwa OX=1194...	[more]

BLAST of Clc06G17930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50100.1	2.6e-68	63.08	Putative thiol-disulphide oxidoreductase DCC	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007263	DCC1-like thiol-disulfide oxidoreductase family	PFAM	PF04134	DUF393	coord: 92..202 e-value: 1.3E-22 score: 81.3
IPR044691	Thioredoxin DCC1	PANTHER	PTHR34290	SI:CH73-390P7.2	coord: 33..227
None	No IPR available	CDD	cd01659	TRX_superfamily	coord: 89..137 e-value: 0.00773483 score: 32.2854
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 84..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G17930.1	Clc06G17930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042246	tissue regeneration
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0015035	protein-disulfide reductase activity