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Clc06G16610 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTGCATGGCAATGGTGGCAAATGGAAAGTGGATAGAAGAAGAAGACTAATATATTTAATTCAAGTTCATGTCAAGCACGTTCAAAGCGGTGCCCAACCCAACCATTCTCAGATAACAAAGAAAAATTCAAGCAAGAACAACGCCTTTGATGAATTTGGACTGCTGATTGAACCAACCCATCATTTTTCAATTCAAAATTGCAATCATGGCGTATCTAGAATTTGATTCCATTCCCCTTACGACTTATGCTTATAAGTACCTGATTTTCTTCAACCCCATCACCGGAAAATGGCGAGGAAACATACCCGATTGCAGAGGGTGAGAGTTTCTCAATCCTTCTCCGCTTGTTTTCAGGTCTGTTTCCGGCAGATTCGAACAAGACCCACCGCCGATTCGATTCAGAATTTTCAGAGGGAGGAACTTTTAGGGTTTGGGGCGGATGGATATTGCACGGCCAGTGCTAAATCTGTGGCTCAGACTGGTAATAGAATAATGGTTGTGGTTGATTCTAGTTTTGAGGGTAAAGGGGCTCTTGAATGGGCTTTGTCTCATGCTGTTCAGAGTCAGGATTCTATTATTCTTCTTCATGTTTCCAAATCTTCAACACAAGGTTAAAACTAGGTCTAATTTGTGTTGATTAGCTACCATTTTGTTTTATTTATTTATTTTTTTTTATGAGACTTGTGTTTTTCTGAAGGTGTTGATGTTTTGCAGGCGTTGTGTTTGATGAAAAGCTTGACATGAAGGCTTATCAGCTTCTTCTGTCTTTGAAGAATATGTGTCAAATGAGAAGACCAGGAGTAAGTTTCTGCCATGCCTTCCATTTTTCTTTTCCATACATGAATCTTGAGATGAAGGGAAGATTGATTGCCAGATAACAATGAATAATAAATAATCAAAATTTAGTGTAAGAATATGTTGTCGTGTCATGTCTTCCATTTTCTTTTCCACATGAATCTAGAGATGAAGGGAAGACTGATTGACAGGTTAATAATGAGTAATACAGAATCAAAATTTAGTGTAAGAATATCTGAACATGTTGTTAAGACAATTGGCTCTTGGTATTCTGTAATACTCCATGTAATAGCCAGATATTGTCCAATCTAACTTAATCCGTTATCTTTGCTTTTAAATTGCACACAAGAGCCTTGTATGATTATATCTGAATCAATGGAGATGCTGTCCTTAATTATATACTAAAGATCTTCTCCACTTCGAAGTTCTCTATATGGAACTCTTTTTGCATCCCTAACATAGCTTAATTGCGCTGATGGTTTCTACCATGTCGTATTGTCGATACTCTTTGTTCTATCTGTGATTGGGTGCAAATTTGAATTTTTGGCTTAGATATCAGTTGAATGTGGATTATAAACAGAACAAGTTAATTAAAGAAACATGACACACAAAGAGAACCCAACTAGGATACTTTACAACGAAAATTAAGCAGAATGCGTTATTGTTTAATTTCAGGTTCAAGTGGAGATGGAATTTCTACAGGGGAAGGAGATGGGTCGTGTGATTATAGAAGAAGCAAAGAAACAGCGAGTGTCTCTGTTGGTTCTTGGGCAAAGAAAACAATCTCCATTCTGGTCACTGATAAAGAAGTTCAGTGCAAACAAGAGAAGGAATCATGGTGGGATTGTGGAGTATTGCATCCAAAACTCTTCATGCCTGACCATTGCGGTGAGGAGGAAAAGCAAGAAACTAGGAGGATATTTGATCACTACAAAAAGTCACAAGAATTTCTGGCTTTTGGCATGAATCTGTATGTTAGAATTTCTTCTTTCAGCTGCCATTGTTGTTTTTGTAGAGAAAAACAAGATGGAAATGGTGAGGCTTCTGATATTGTAAGTCTTATCTGGCCTCACTTTTTGCTTCTTTTATGATGATGGAGTGGCTGTATTACTTAAAAGTAGAAAACCCAAGAAAAGAAAATGATGTAAAATTTTGTAAATTGATCTTCCTTTTCAACTTCATTGTTATTTGATCGTAGCTACAAGATTATCACTTTTCAACTTCATTGTTATT AGTGCATGGCAATGGTGGCAAATGGAAAGTGGATAGAAGAAGAAGACTAATATATTTAATTCAAGTTCATGTCAAGCACGTTCAAAGCGGTGCCCAACCCAACCATTCTCAGATAACAAAGAAAAATTCAAGCAAGAACAACGCCTTTGATGAATTTGGACTGCTGATTGAACCAACCCATCATTTTTCAATTCAAAATTGCAATCATGGCGTATCTAGAATTTGATTCCATTCCCCTTACGACTTATGCTTATAAGTACCTGATTTTCTTCAACCCCATCACCGGAAAATGGCGAGGAAACATACCCGATTGCAGAGGGTGAGAGTTTCTCAATCCTTCTCCGCTTGTTTTCAGGTCTGTTTCCGGCAGATTCGAACAAGACCCACCGCCGATTCGATTCAGAATTTTCAGAGGGAGGAACTTTTAGGGTTTGGGGCGGATGGATATTGCACGGCCAGTGCTAAATCTGTGGCTCAGACTGGTAATAGAATAATGGTTGTGGTTGATTCTAGTTTTGAGGGTAAAGGGGCTCTTGAATGGGCTTTGTCTCATGCTGTTCAGAGTCAGGATTCTATTATTCTTCTTCATGTTTCCAAATCTTCAACACAAGGCGTTGTGTTTGATGAAAAGCTTGACATGAAGGCTTATCAGCTTCTTCTGTCTTTGAAGAATATGTGTCAAATGAGAAGACCAGGAGTAAGTTTCTGTTCAAGTGGAGATGGAATTTCTACAGGGGAAGGAGATGGGTCGTGTGATTATAGAAGAAGCAAAGAAACAGCGAGTGTCTCTGTTGGTTCTTGGGCAAAGAAAACAATCTCCATTCTGGTCACTGATAAAGAAGTTCAGTGCAAACAAGAGAAGGAATCATGGTGGGATTGTGGAGTATTGCATCCAAAACTCTTCATGCCTGACCATTGCGGTGAGGAGGAAAAGCAAGAAACTAGGAGGATATTTGATCACTACAAAAAGTCACAAGAATTTCTGGCTTTTGGCATGAATCTGTATGTTAGAATTTCTTCTTTCAGCTGCCATTGTTGTTTTTGTAGAGAAAAACAAGATGGAAATGGTGAGGCTTCTGATATTGTAAGTCTTATCTGGCCTCACTTTTTGCTTCTTTTATGATGATGGAGTGGCTGTATTACTTAAAAGTAGAAAACCCAAGAAAAGAAAATGATGTAAAATTTTGTAAATTGATCTTCCTTTTCAACTTCATTGTTATTTGATCGTAGCTACAAGATTATCACTTTTCAACTTCATTGTTATT ATGGCGAGGAAACATACCCGATTGCAGAGGGTGAGAGTTTCTCAATCCTTCTCCGCTTGTTTTCAGGTCTGTTTCCGGCAGATTCGAACAAGACCCACCGCCGATTCGATTCAGAATTTTCAGAGGGAGGAACTTTTAGGGTTTGGGGCGGATGGATATTGCACGGCCAGTGCTAAATCTGTGGCTCAGACTGGTAATAGAATAATGGTTGTGGTTGATTCTAGTTTTGAGGGTAAAGGGGCTCTTGAATGGGCTTTGTCTCATGCTGTTCAGAGTCAGGATTCTATTATTCTTCTTCATGTTTCCAAATCTTCAACACAAGGCGTTGTGTTTGATGAAAAGCTTGACATGAAGGCTTATCAGCTTCTTCTGTCTTTGAAGAATATGTGTCAAATGAGAAGACCAGGAGTAAGTTTCTGTTCAAGTGGAGATGGAATTTCTACAGGGGAAGGAGATGGGTCGTGTGATTATAGAAGAAGCAAAGAAACAGCGAGTGTCTCTGTTGGTTCTTGGGCAAAGAAAACAATCTCCATTCTGGTCACTGATAAAGAAGTTCAGTGCAAACAAGAGAAGGAATCATGGTGGGATTGTGGAGTATTGCATCCAAAACTCTTCATGCCTGACCATTGCGGTGAGGAGGAAAAGCAAGAAACTAGGAGGATATTTGATCACTACAAAAAGTCACAAGAATTTCTGGCTTTTGGCATGAATCTGTATGTTAGAATTTCTTCTTTCAGCTGCCATTGTTGTTTTTGTAGAGAAAAACAAGATGGAAATGGTGAGGCTTCTGATATTGTAAGTCTTATCTGGCCTCACTTTTTGCTTCTTTTATGA MARKHTRLQRVRVSQSFSACFQVCFRQIRTRPTADSIQNFQREELLGFGADGYCTASAKSVAQTGNRIMVVVDSSFEGKGALEWALSHAVQSQDSIILLHVSKSSTQGVVFDEKLDMKAYQLLLSLKNMCQMRRPGVSFCSSGDGISTGEGDGSCDYRRSKETASVSVGSWAKKTISILVTDKEVQCKQEKESWWDCGVLHPKLFMPDHCGEEEKQETRRIFDHYKKSQEFLAFGMNLYVRISSFSCHCCFCREKQDGNGEASDIVSLIWPHFLLLL Homology
BLAST of Clc06G16610 vs. NCBI nr
Match: KAA0058012.1 (putative Adenine nucleotide alpha hydrolases-like superfamily protein [Cucumis melo var. makuwa] >TYJ98235.1 putative Adenine nucleotide alpha hydrolases-like superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 460.7 bits (1184), Expect = 9.0e-126 Identity = 239/300 (79.67%), Postives = 246/300 (82.00%), Query Frame = 0
BLAST of Clc06G16610 vs. NCBI nr
Match: XP_038880017.1 (uncharacterized protein LOC120071709 [Benincasa hispida]) HSP 1 Score: 253.8 bits (647), Expect = 1.7e-63 Identity = 137/186 (73.66%), Postives = 147/186 (79.03%), Query Frame = 0
BLAST of Clc06G16610 vs. NCBI nr
Match: XP_008453308.1 (PREDICTED: uncharacterized protein LOC103494065 [Cucumis melo]) HSP 1 Score: 241.5 bits (615), Expect = 8.6e-60 Identity = 133/186 (71.51%), Postives = 142/186 (76.34%), Query Frame = 0
BLAST of Clc06G16610 vs. NCBI nr
Match: XP_004138331.1 (uncharacterized protein LOC101221050 [Cucumis sativus] >KAE8652448.1 hypothetical protein Csa_013982 [Cucumis sativus]) HSP 1 Score: 236.5 bits (602), Expect = 2.8e-58 Identity = 131/186 (70.43%), Postives = 139/186 (74.73%), Query Frame = 0
BLAST of Clc06G16610 vs. NCBI nr
Match: XP_023531669.1 (uncharacterized protein LOC111793841 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 224.6 bits (571), Expect = 1.1e-54 Identity = 121/186 (65.05%), Postives = 139/186 (74.73%), Query Frame = 0
BLAST of Clc06G16610 vs. ExPASy TrEMBL
Match: A0A0A0LPN5 (Usp domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G015670 PE=4 SV=1) HSP 1 Score: 467.2 bits (1201), Expect = 4.7e-128 Identity = 238/278 (85.61%), Postives = 246/278 (88.49%), Query Frame = 0
BLAST of Clc06G16610 vs. ExPASy TrEMBL
Match: A0A5D3BIJ0 (Putative Adenine nucleotide alpha hydrolases-like superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold346G00070 PE=4 SV=1) HSP 1 Score: 460.7 bits (1184), Expect = 4.4e-126 Identity = 239/300 (79.67%), Postives = 246/300 (82.00%), Query Frame = 0
BLAST of Clc06G16610 vs. ExPASy TrEMBL
Match: A0A1S3BVX2 (uncharacterized protein LOC103494065 OS=Cucumis melo OX=3656 GN=LOC103494065 PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 4.2e-60 Identity = 133/186 (71.51%), Postives = 142/186 (76.34%), Query Frame = 0
BLAST of Clc06G16610 vs. ExPASy TrEMBL
Match: A0A6J1HM19 (uncharacterized protein LOC111465801 OS=Cucurbita maxima OX=3661 GN=LOC111465801 PE=4 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 6.9e-55 Identity = 122/186 (65.59%), Postives = 139/186 (74.73%), Query Frame = 0
BLAST of Clc06G16610 vs. ExPASy TrEMBL
Match: A0A6J1F4R8 (uncharacterized protein LOC111440820 OS=Cucurbita moschata OX=3662 GN=LOC111440820 PE=4 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 1.2e-54 Identity = 120/186 (64.52%), Postives = 139/186 (74.73%), Query Frame = 0
BLAST of Clc06G16610 vs. TAIR 10
Match: AT3G03290.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 75.1 bits (183), Expect = 9.9e-14 Identity = 45/124 (36.29%), Postives = 67/124 (54.03%), Query Frame = 0
BLAST of Clc06G16610 vs. TAIR 10
Match: AT5G17390.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 71.2 bits (173), Expect = 1.4e-12 Identity = 42/123 (34.15%), Postives = 68/123 (55.28%), Query Frame = 0
BLAST of Clc06G16610 vs. TAIR 10
Match: AT1G69080.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 61.6 bits (148), Expect = 1.1e-09 Identity = 36/90 (40.00%), Postives = 49/90 (54.44%), Query Frame = 0
BLAST of Clc06G16610 vs. TAIR 10
Match: AT2G03720.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 61.6 bits (148), Expect = 1.1e-09 Identity = 42/111 (37.84%), Postives = 65/111 (58.56%), Query Frame = 0
BLAST of Clc06G16610 vs. TAIR 10
Match: AT1G69080.2 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 53.9 bits (128), Expect = 2.4e-07 Identity = 27/47 (57.45%), Postives = 31/47 (65.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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