Clc06G15970 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G15970
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Unknown protein
Location	ClcChr06: 26816376 .. 26817836 (+)
RNA-Seq Expression	Clc06G15970
Synteny	Clc06G15970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAGTGAACTCAAACTCTCCTGCAACTCCTCTTTCTCCATTTCTCTTCAAATCCTTCTCTCTCTAAACCACGGAAGCTTGACTTCTCTGCTTCTCTCCACTTGTTTCCTTCTCTCTTTCTCTCCTTTTTCCTCCTTCAAACCCTCCTTTCTGCGGAGGAGCTCGCCATTTCAGGTCTCTCCTCTTCCTCTCTCTGTTTCTGTTGGCTGTCTTTTTGTTTTAAGAACATTTACTGGTGGAAATCTTTCTGGGTTTTGAGTTTCTGCTTTTCTGGGAGAATTTTATGCTCCTTTTTGAGTTTACAATCGTGGGTCTAATTGGTAGTGGAGGATAATAGACTCGAGAGTATGATTCGAATGTTAATTCAACAAGGATTGATGGAGAATATGTTTTTATTTTCTACCCATTTTTTGTTTTTCCTCAATTTTGAGCTCGCGAACTGTTATCCGGTTGTTGTTTTTTGTTGCTGGAGGGGAGGGGCCCTCTTTGAGCTTGTGTTGTGGATATCCACGTCTTTCTCAAATTTGTTAAGAGAGAAAAGGAAAAGGAACTCTTGATTTACACGTAAAGAGAGTTTAAATTGGCTTTTCTTCTGTGCTGATCTTTCTTTCCACTTGGCTGAAAATTTTGAGTTGCCTGAAAGGTGTTTGTTTGTTTGTCTGTTTGTTTTAGATCTTTAGAGTTGTAAGGAGGAATATCAGAGAGAATGAACAGGTGGGTTTACGAGCAGAACGCCATGGCTGCCTACCAAGACATGAGGATGGAATCTGTGGTTTGTCCAAAGCCACGTCGTTTGGTTCTTCAAACCCCTCCTGATAATGACCCCATCAGAGCCTATAGATGGCCCATCAGGTTCGTTAATCCCAATTTAATCTTCTTTTTGCTAGAATCTAGAACTTTCTTCTTTCAATTATGTAGATTTGAACTTGAATCTCGTTGAATTAACTTCTGATATGTGAATATGCTTGCTTGCAGCCACTCCAAGACAGGAAATTCAAGAGCAGGAGCTGAGTTTCTTGATATGATCCTCACCAAGGTTCTTAATTACCATCTCTCTCGCTCACTAAGCTCTTTGTTGTTTATCTTGATTGATTACTTATTTCCCTTGTGTATGAGATTGATGAGCTACCACTACCAACAATCTTATAAATGTGGGTTATACTTATGTTTATATTATAGGAAAGTTATGGCGAAAATTTTAGCCACCAATTAGCAACATCTCCACCATTCTTTTGGGGGTCTCCACCAAGTAGAGCTTCCAACCCTTTAGTCCAAGATGAGCAATTTGGCAATGGCAACAATATCTACCAACTTTGTGAAGGGCCACCATCTCCATCAACCCGTAAAGGAGGATGCACCCGAACGAAATTCGGGCATCGACCTGCAGCAGTCCGAATCGAAGGATTCGACTGTCTCAACCACGATGCTCGAAATTGCAGCATTTCTGCTGTGGCTTAG

mRNA sequence

ATGAATAGTGAACTCAAACTCTCCTGCAACTCCTCTTTCTCCATTTCTCTTCAAATCCTTCTCTCTCTAAACCACGGAAGCTTGACTTCTCTGCTTCTCTCCACTTGTTTCCTTCTCTCTTTCTCTCCTTTTTCCTCCTTCAAACCCTCCTTTCTGCGGAGGAGCTCGCCATTTCAGATCTTTAGAGTTGTAAGGAGGAATATCAGAGAGAATGAACAGCCACGTCGTTTGGTTCTTCAAACCCCTCCTGATAATGACCCCATCAGAGCCTATAGATGGCCCATCAGCCACTCCAAGACAGGAAATTCAAGAGCAGGAGCTGAGTTTCTTGATATGATCCTCACCAAGGAAAGTTATGGCGAAAATTTTAGCCACCAATTAGCAACATCTCCACCATTCTTTTGGGGGTCTCCACCAAGTAGAGCTTCCAACCCTTTAGTCCAAGATGAGCAATTTGGCAATGGCAACAATATCTACCAACTTTGTGAAGGGCCACCATCTCCATCAACCCGTAAAGGAGGATGCACCCGAACGAAATTCGGGCATCGACCTGCAGCAGTCCGAATCGAAGGATTCGACTGTCTCAACCACGATGCTCGAAATTGCAGCATTTCTGCTGTGGCTTAG

Coding sequence (CDS)

ATGAATAGTGAACTCAAACTCTCCTGCAACTCCTCTTTCTCCATTTCTCTTCAAATCCTTCTCTCTCTAAACCACGGAAGCTTGACTTCTCTGCTTCTCTCCACTTGTTTCCTTCTCTCTTTCTCTCCTTTTTCCTCCTTCAAACCCTCCTTTCTGCGGAGGAGCTCGCCATTTCAGATCTTTAGAGTTGTAAGGAGGAATATCAGAGAGAATGAACAGCCACGTCGTTTGGTTCTTCAAACCCCTCCTGATAATGACCCCATCAGAGCCTATAGATGGCCCATCAGCCACTCCAAGACAGGAAATTCAAGAGCAGGAGCTGAGTTTCTTGATATGATCCTCACCAAGGAAAGTTATGGCGAAAATTTTAGCCACCAATTAGCAACATCTCCACCATTCTTTTGGGGGTCTCCACCAAGTAGAGCTTCCAACCCTTTAGTCCAAGATGAGCAATTTGGCAATGGCAACAATATCTACCAACTTTGTGAAGGGCCACCATCTCCATCAACCCGTAAAGGAGGATGCACCCGAACGAAATTCGGGCATCGACCTGCAGCAGTCCGAATCGAAGGATTCGACTGTCTCAACCACGATGCTCGAAATTGCAGCATTTCTGCTGTGGCTTAG

Protein sequence

MNSELKLSCNSSFSISLQILLSLNHGSLTSLLLSTCFLLSFSPFSSFKPSFLRRSSPFQIFRVVRRNIRENEQPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNNIYQLCEGPPSPSTRKGGCTRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA

Homology

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BLAST of Clc06G15970 vs. NCBI nr
Match: XP_038878157.1 (uncharacterized protein LOC120070307 [Benincasa hispida])

HSP 1 Score: 281.2 bits (718), Expect = 7.3e-72
Identity = 130/136 (95.59%), Postives = 133/136 (97.79%), Query Frame = 0


Query: 73  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPP 132
           +PRRLVLQTPPDNDPIRAYRWPISHS+TGNSRAGAEFLDMILTKESYGENFSHQLATSPP
Sbjct: 26  KPRRLVLQTPPDNDPIRAYRWPISHSRTGNSRAGAEFLDMILTKESYGENFSHQLATSPP 85

Query: 133 FFWGSPPSRASNPLVQDEQFGNGNNIYQLCEGPPSPSTRKGGCTRTKFGHRPAAVRIEGF 192
            FWGSPPSRASNPLVQDEQFGNGNNIYQLCEGPPSPSTRKGGC R KFGHRPAAVRIEGF
Sbjct: 86  SFWGSPPSRASNPLVQDEQFGNGNNIYQLCEGPPSPSTRKGGCARMKFGHRPAAVRIEGF 145

Query: 193 DCLNHDARNCSISAVA 209
           DCLNHD+RNCSISAVA
Sbjct: 146 DCLNHDSRNCSISAVA 161

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BLAST of Clc06G15970 vs. NCBI nr
Match: XP_008453392.1 (PREDICTED: uncharacterized protein LOC103494124 [Cucumis melo] >KAA0058074.1 uncharacterized protein E6C27_scaffold274G003810 [Cucumis melo var. makuwa] >TYK28426.1 uncharacterized protein E5676_scaffold629G00560 [Cucumis melo var. makuwa])

HSP 1 Score: 266.5 bits (680), Expect = 1.9e-67
Identity = 126/137 (91.97%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 73  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPP 132
           +PRRLV QT PDNDPI AYRWP+SH  TGNSRAGAEFLDMILTKESYGENFSHQLATSPP
Sbjct: 26  KPRRLVFQTLPDNDPITAYRWPVSHPNTGNSRAGAEFLDMILTKESYGENFSHQLATSPP 85

Query: 133 FFWGSPPSRASNPLVQDEQFGNGNN-IYQLCEGPPSPSTRKGGCTRTKFGHRPAAVRIEG 192
           FFWGSPPSRASNPLVQDEQFGNGNN IYQ CEGPPSPSTRKGGC RTKFGHRPAAVRIEG
Sbjct: 86  FFWGSPPSRASNPLVQDEQFGNGNNTIYQPCEGPPSPSTRKGGCARTKFGHRPAAVRIEG 145

Query: 193 FDCLNHDARNCSISAVA 209
           FDCLN DARNCSISAVA
Sbjct: 146 FDCLNRDARNCSISAVA 162

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BLAST of Clc06G15970 vs. NCBI nr
Match: XP_004138242.1 (uncharacterized protein LOC101219468 [Cucumis sativus] >KGN63819.1 hypothetical protein Csa_013662 [Cucumis sativus])

HSP 1 Score: 265.0 bits (676), Expect = 5.4e-67
Identity = 126/137 (91.97%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 73  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPP 132
           +PRRLV QT PDNDPI AYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLA+SPP
Sbjct: 26  KPRRLVFQTLPDNDPIPAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLASSPP 85

Query: 133 FFWGSPPSRASNPLVQDEQFGNGNN-IYQLCEGPPSPSTRKGGCTRTKFGHRPAAVRIEG 192
           FFWGSPPSRASNPLVQDEQFGNGNN IYQ CEGPPSPST KGGC R KFGHRPAAVRIEG
Sbjct: 86  FFWGSPPSRASNPLVQDEQFGNGNNTIYQPCEGPPSPSTHKGGCARAKFGHRPAAVRIEG 145

Query: 193 FDCLNHDARNCSISAVA 209
           FDCLN DARNCSISAVA
Sbjct: 146 FDCLNRDARNCSISAVA 162

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BLAST of Clc06G15970 vs. NCBI nr
Match: KAG7023234.1 (hypothetical protein SDJN02_14259 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 257.7 bits (657), Expect = 8.7e-65
Identity = 119/136 (87.50%), Postives = 125/136 (91.91%), Query Frame = 0


Query: 73  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPP 132
           +PRRLVLQT PDNDPI A+RWPI H+KTGNS+AGAEFLDMIL KES+GEN SHQLATSPP
Sbjct: 26  KPRRLVLQTLPDNDPITAHRWPIGHAKTGNSKAGAEFLDMILAKESFGENLSHQLATSPP 85

Query: 133 FFWGSPPSRASNPLVQDEQFGNGNNIYQLCEGPPSPSTRKGGCTRTKFGHRPAAVRIEGF 192
           FFWGSPPSR SNPLVQDEQFGNGNNIYQLCE PPSPST KGGCTR KFGHRPAAVRIEGF
Sbjct: 86  FFWGSPPSRTSNPLVQDEQFGNGNNIYQLCEEPPSPSTHKGGCTRMKFGHRPAAVRIEGF 145

Query: 193 DCLNHDARNCSISAVA 209
           DCL+ DARNCSIS VA
Sbjct: 146 DCLDRDARNCSISVVA 161

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BLAST of Clc06G15970 vs. NCBI nr
Match: XP_023516751.1 (uncharacterized protein LOC111780556 [Cucurbita pepo subsp. pepo] >KAG6589547.1 hypothetical protein SDJN03_14970, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 257.7 bits (657), Expect = 8.7e-65
Identity = 119/136 (87.50%), Postives = 125/136 (91.91%), Query Frame = 0


Query: 73  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPP 132
           +PRRLVLQT PDNDPI A+RWPI H+KTGNS+AGAEFLDMIL KES+GEN SHQLATSPP
Sbjct: 16  KPRRLVLQTLPDNDPITAHRWPIGHAKTGNSKAGAEFLDMILAKESFGENLSHQLATSPP 75

Query: 133 FFWGSPPSRASNPLVQDEQFGNGNNIYQLCEGPPSPSTRKGGCTRTKFGHRPAAVRIEGF 192
           FFWGSPPSR SNPLVQDEQFGNGNNIYQLCE PPSPST KGGCTR KFGHRPAAVRIEGF
Sbjct: 76  FFWGSPPSRTSNPLVQDEQFGNGNNIYQLCEEPPSPSTHKGGCTRMKFGHRPAAVRIEGF 135

Query: 193 DCLNHDARNCSISAVA 209
           DCL+ DARNCSIS VA
Sbjct: 136 DCLDRDARNCSISVVA 151

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BLAST of Clc06G15970 vs. ExPASy TrEMBL
Match: A0A5A7USD0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00560 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 9.1e-68
Identity = 126/137 (91.97%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 73  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPP 132
           +PRRLV QT PDNDPI AYRWP+SH  TGNSRAGAEFLDMILTKESYGENFSHQLATSPP
Sbjct: 26  KPRRLVFQTLPDNDPITAYRWPVSHPNTGNSRAGAEFLDMILTKESYGENFSHQLATSPP 85

Query: 133 FFWGSPPSRASNPLVQDEQFGNGNN-IYQLCEGPPSPSTRKGGCTRTKFGHRPAAVRIEG 192
           FFWGSPPSRASNPLVQDEQFGNGNN IYQ CEGPPSPSTRKGGC RTKFGHRPAAVRIEG
Sbjct: 86  FFWGSPPSRASNPLVQDEQFGNGNNTIYQPCEGPPSPSTRKGGCARTKFGHRPAAVRIEG 145

Query: 193 FDCLNHDARNCSISAVA 209
           FDCLN DARNCSISAVA
Sbjct: 146 FDCLNRDARNCSISAVA 162

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BLAST of Clc06G15970 vs. ExPASy TrEMBL
Match: A0A1S3BVK5 (uncharacterized protein LOC103494124 OS=Cucumis melo OX=3656 GN=LOC103494124 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 9.1e-68
Identity = 126/137 (91.97%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 73  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPP 132
           +PRRLV QT PDNDPI AYRWP+SH  TGNSRAGAEFLDMILTKESYGENFSHQLATSPP
Sbjct: 26  KPRRLVFQTLPDNDPITAYRWPVSHPNTGNSRAGAEFLDMILTKESYGENFSHQLATSPP 85

Query: 133 FFWGSPPSRASNPLVQDEQFGNGNN-IYQLCEGPPSPSTRKGGCTRTKFGHRPAAVRIEG 192
           FFWGSPPSRASNPLVQDEQFGNGNN IYQ CEGPPSPSTRKGGC RTKFGHRPAAVRIEG
Sbjct: 86  FFWGSPPSRASNPLVQDEQFGNGNNTIYQPCEGPPSPSTRKGGCARTKFGHRPAAVRIEG 145

Query: 193 FDCLNHDARNCSISAVA 209
           FDCLN DARNCSISAVA
Sbjct: 146 FDCLNRDARNCSISAVA 162

[Close]

BLAST of Clc06G15970 vs. ExPASy TrEMBL
Match: A0A0A0LS24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G023070 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.6e-67
Identity = 126/137 (91.97%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 73  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPP 132
           +PRRLV QT PDNDPI AYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLA+SPP
Sbjct: 26  KPRRLVFQTLPDNDPIPAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLASSPP 85

Query: 133 FFWGSPPSRASNPLVQDEQFGNGNN-IYQLCEGPPSPSTRKGGCTRTKFGHRPAAVRIEG 192
           FFWGSPPSRASNPLVQDEQFGNGNN IYQ CEGPPSPST KGGC R KFGHRPAAVRIEG
Sbjct: 86  FFWGSPPSRASNPLVQDEQFGNGNNTIYQPCEGPPSPSTHKGGCARAKFGHRPAAVRIEG 145

Query: 193 FDCLNHDARNCSISAVA 209
           FDCLN DARNCSISAVA
Sbjct: 146 FDCLNRDARNCSISAVA 162

[Close]

BLAST of Clc06G15970 vs. ExPASy TrEMBL
Match: A0A6J1C2G9 (uncharacterized protein LOC111006835 OS=Momordica charantia OX=3673 GN=LOC111006835 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 7.2e-65
Identity = 122/137 (89.05%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 73  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPP 132
           +PRRLVLQT PDNDPIRA+RWP++H KTGNS+AGAE LDMILTKESYGENFSHQLATSPP
Sbjct: 26  KPRRLVLQT-PDNDPIRAHRWPLNHPKTGNSKAGAELLDMILTKESYGENFSHQLATSPP 85

Query: 133 FFWGSPPSRASNPLVQDEQFGNGNNIYQLCE-GPPSPSTRKGGCTRTKFGHRPAAVRIEG 192
           FFWGSPPSRASNP+VQDEQFGNGNN YQLCE GPPSPSTRKGGC R KFGHRPAAVRIEG
Sbjct: 86  FFWGSPPSRASNPVVQDEQFGNGNNTYQLCEGGPPSPSTRKGGCARMKFGHRPAAVRIEG 145

Query: 193 FDCLNHDARNCSISAVA 209
           FDCL  DARNCSISAVA
Sbjct: 146 FDCLGRDARNCSISAVA 161

[Close]

BLAST of Clc06G15970 vs. ExPASy TrEMBL
Match: A0A6J1JA55 (uncharacterized protein LOC111484938 OS=Cucurbita maxima OX=3661 GN=LOC111484938 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 2.1e-64
Identity = 117/136 (86.03%), Postives = 125/136 (91.91%), Query Frame = 0


Query: 73  QPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPP 132
           +PRRLVLQT PDNDPI A+RWPI H+KTGNS+AGAEFLDMIL KES+GEN SHQLATSPP
Sbjct: 26  KPRRLVLQTLPDNDPITAHRWPIGHAKTGNSKAGAEFLDMILAKESFGENLSHQLATSPP 85

Query: 133 FFWGSPPSRASNPLVQDEQFGNGNNIYQLCEGPPSPSTRKGGCTRTKFGHRPAAVRIEGF 192
           FFWG+PPSR SNPLVQDEQFGNGNNIYQLCE PPSP+T KGGCTR KFGHRPAAVRIEGF
Sbjct: 86  FFWGTPPSRTSNPLVQDEQFGNGNNIYQLCEEPPSPATHKGGCTRMKFGHRPAAVRIEGF 145

Query: 193 DCLNHDARNCSISAVA 209
           DCL+ DARNCSIS VA
Sbjct: 146 DCLDRDARNCSISVVA 161

[Close]

BLAST of Clc06G15970 vs. TAIR 10
Match: AT3G02555.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 100.5 bits (249), Expect = 1.7e-21
Identity = 62/130 (47.69%), Postives = 75/130 (57.69%), Query Frame = 0


Query: 85  NDPIRAYRWPISHSKTG---NSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSR 144
           N+ IR +R   S S      +S+AG + LD+   KES         + SPPFF GSPPSR
Sbjct: 40  NNVIRPFRLHFSLSGADDVCDSKAGEDLLDIFRRKESVS-------SRSPPFFLGSPPSR 99

Query: 145 ASNPLVQDEQFGNGN-NIYQLCEGP--PSPSTRKGGCTRTKFGHRPAAVRIEGFDCLNHD 204
           A+NPL QD +FG+   N       P  PS S  K GC R KFG +PA VR+EGFDCLN D
Sbjct: 100 AANPLAQDARFGDEKLNTVSPSLSPLLPSASRVKSGCGRMKFGVKPATVRVEGFDCLNRD 159

Query: 205 ARNCSISAVA 209
             N SI A+A
Sbjct: 160 RPNSSIPAMA 162

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BLAST of Clc06G15970 vs. TAIR 10
Match: AT1G68490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 97.1 bits (240), Expect = 1.8e-20
Identity = 67/150 (44.67%), Postives = 90/150 (60.00%), Query Frame = 0


Query: 73  QPRRLVLQTPPDNDPIRAYRWPISHS-KTGNSRAGAEFLDMILTKESYG-ENFSHQLATS 132
           +PRR+ L+    + P R+ R   SH  +   S+A  + LD+ILTK+ YG E  + Q+  S
Sbjct: 36  KPRRIGLRN-NHHHPSRSLRCYFSHQLELCESKAETDILDIILTKDGYGAEQVNKQVIDS 95

Query: 133 P-PFFWGSPPSRASNPLVQDEQFGNG----NNIY--QL----CEGPPSPSTRKGGC-TRT 192
           P PF  GSPPSR +NPL QD +F +     +++   QL       P S S RKGGC  R 
Sbjct: 96  PSPFLCGSPPSRVANPLTQDARFRDEIVSVSSVIPPQLGLPPSSSPSSSSGRKGGCVVRG 155

Query: 193 KFGHRPAAVRIEGFDCLNHDARNCSISAVA 209
            FG+ P  VR+EGFDCL+ D+RNCSI A+A
Sbjct: 156 NFGNSP-KVRVEGFDCLDRDSRNCSIPALA 183

[Close]

BLAST of Clc06G15970 vs. TAIR 10
Match: AT5G16110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 90.1 bits (222), Expect = 2.2e-18
Identity = 79/223 (35.43%), Postives = 112/223 (50.22%), Query Frame = 0


Query: 12  SFSISLQILLSLNHGSLTSLLLSTCFLLSFSPFSSFKP---------SFLRRSSPFQIFR 71
           S S+SL + L  +  S +   L   F  +F   S  K          +F+ R    ++  
Sbjct: 29  SLSLSLSLFLLSSPSSFSLSPLPEIFTQAFFCGSEVKKMNHCNLQQNAFMSRE---EMMG 88

Query: 72  VVRRNIRENEQPRRLVLQTPPDNDPIRAYRWPISHSKTG--NSRAGAEFLDMILTKESYG 131
             R+++    +PRR+ L     N+ IR  R  +S +     +S+AGAE L++I  KE  G
Sbjct: 89  FDRKDLVVCPKPRRVGLLA---NNVIRPLRLHMSQAAADLCDSKAGAELLEIIRRKEDNG 148

Query: 132 ENFSHQLATSPPFFWGSPPSRASNPLVQDEQFG-------NGNNIY---QLCEGPPSPST 191
                 L++SPP+F GSPPSRA+NPL QD +F        + N+ +       G PSPS+
Sbjct: 149 -TIGQLLSSSPPYFPGSPPSRAANPLAQDARFRDEKLNPISPNSPFLQPYSATGFPSPSS 208

Query: 192 RKG-----GCTRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA 209
                   GC R KFG    AVR+EGFDCLN D +N SI A+A
Sbjct: 209 SSSSSSSRGCVRMKFGLNSPAVRVEGFDCLNRDRQNSSIPAMA 244

[Close]

BLAST of Clc06G15970 vs. TAIR 10
Match: AT1G13390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 74.3 bits (181), Expect = 1.3e-13
Identity = 59/171 (34.50%), Postives = 83/171 (48.54%), Query Frame = 0


Query: 61  FRVVRRNIRENEQPRRLVLQTPP-----DNDPIRAYRWPISHS-KTGNSRAGAEFLDMIL 120
           F  +RRN   +++   ++   P      ++   R+ RW ++H  +   S +G+E LD IL
Sbjct: 12  FEEMRRNAAVSDRRDAVICPKPRRVGALNHHSSRSLRWQLNHQMELCESNSGSEILDFIL 71

Query: 121 TKESYG---ENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNNIYQLCEGPPSPST- 180
           TK   G   ++ +  + T P FF GSPPSR SNPL +D  F        L    PSPST 
Sbjct: 72  TKGGGGGGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSLFRE----ELLMVASPSPSTP 131

Query: 181 -----------RKGGC--TRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA 209
                      R G C    T FG+ P  VR+ GFDC +  + N SIS +A
Sbjct: 132 RATKPQPPSSPRNGSCVMAATSFGNNP-VVRVVGFDC-DRRSSNRSISTLA 176

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BLAST of Clc06G15970 vs. TAIR 10
Match: AT1G13390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 74.3 bits (181), Expect = 1.3e-13
Identity = 59/171 (34.50%), Postives = 83/171 (48.54%), Query Frame = 0


Query: 61  FRVVRRNIRENEQPRRLVLQTPP-----DNDPIRAYRWPISHS-KTGNSRAGAEFLDMIL 120
           F  +RRN   +++   ++   P      ++   R+ RW ++H  +   S +G+E LD IL
Sbjct: 12  FEEMRRNAAVSDRRDAVICPKPRRVGALNHHSSRSLRWQLNHQMELCESNSGSEILDFIL 71

Query: 121 TKESYG---ENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNNIYQLCEGPPSPST- 180
           TK   G   ++ +  + T P FF GSPPSR SNPL +D  F        L    PSPST 
Sbjct: 72  TKGGGGGGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSLFRE----ELLMVASPSPSTP 131

Query: 181 -----------RKGGC--TRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA 209
                      R G C    T FG+ P  VR+ GFDC +  + N SIS +A
Sbjct: 132 RATKPQPPSSPRNGSCVMAATSFGNNP-VVRVVGFDC-DRRSSNRSISTLA 176

The following BLAST results are available for this feature:

BLAST of Clc06G15970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878157.1	7.3e-72	95.59	uncharacterized protein LOC120070307 [Benincasa hispida]	[more]
XP_008453392.1	1.9e-67	91.97	PREDICTED: uncharacterized protein LOC103494124 [Cucumis melo] >KAA0058074.1 unc...	[more]
XP_004138242.1	5.4e-67	91.97	uncharacterized protein LOC101219468 [Cucumis sativus] >KGN63819.1 hypothetical ...	[more]
KAG7023234.1	8.7e-65	87.50	hypothetical protein SDJN02_14259 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023516751.1	8.7e-65	87.50	uncharacterized protein LOC111780556 [Cucurbita pepo subsp. pepo] >KAG6589547.1 ...	[more]

BLAST of Clc06G15970 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc06G15970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7USD0	9.1e-68	91.97	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BVK5	9.1e-68	91.97	uncharacterized protein LOC103494124 OS=Cucumis melo OX=3656 GN=LOC103494124 PE=...	[more]
A0A0A0LS24	2.6e-67	91.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G023070 PE=4 SV=1	[more]
A0A6J1C2G9	7.2e-65	89.05	uncharacterized protein LOC111006835 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1JA55	2.1e-64	86.03	uncharacterized protein LOC111484938 OS=Cucurbita maxima OX=3661 GN=LOC111484938...	[more]

BLAST of Clc06G15970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02555.1	1.7e-21	47.69	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G68490.1	1.8e-20	44.67	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G16110.1	2.2e-18	35.43	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G13390.1	1.3e-13	34.50	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13390.2	1.3e-13	34.50	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33384	EXPRESSED PROTEIN	coord: 73..208
None	No IPR available	PANTHER	PTHR33384:SF22	SUBFAMILY NOT NAMED	coord: 73..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G15970.1	Clc06G15970.1	mRNA