Clc06G15840 (gene) Watermelon (cordophanus) v2

Overview
NameClc06G15840
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionVitellogenin-2
LocationClcChr06: 26719803 .. 26720573 (-)
RNA-Seq ExpressionClc06G15840
SyntenyClc06G15840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGCTCGACAAAATGTCCACCTGGGATTTCACTCTCAAATGATCTTGTTCTTTCAGAGATGTTGCCTATCCAACCTCGTGAATCTTCTGAATTTGAGTTTTGTGTCGGTGGTTGCTTTGAGTATGAATCTTCTTCTGCTGACGAGCTCTTCTTCAATGGCGTCATCATTCCCACTCAGAATCATCAGAGGTTTGTGCACGGTAAACAAACTCATCAACGTGAGAGTCCCCCAATTTTACCTTCCTCGCTTCCTCCTCTTCCTCCTGCTGTGGCAACAGAGAATTCAAAGAAAGATAACACAGAGGAATTAGTTCATGTGGTGAATTCTGAGTCTGAGAAGAAAAGTCGGTCCAAATCTTTCTGGGGGTTTCGAAGAAGTAATAGTGTTACTTATGACAGTAGAAAGACTTCATTTTGCTCGCTACCACTTTTATCAAGAAGCAATTCTACTGGTTCAGTCCAAAACCCAAAACGAACGCCATTGAAGGATGTGAAAAGCCACAATCCTGTGCTGCAGAAACAGCATTCAGTTTCAGAGGGAAATTCAAAATCCTCATTTTTAGCATCCCCATTTTCAAACTCTGCTGCAAATTCATATTCAAAACTCCAAAAGGGTCTGAAGAAGAATCAGGGAGGGTTTTATGGGAACAATCTCTATGTAAACCCCATTTTGAATGTGCCACCTCCTTACATCACCAAAGAAACTGCAAACATCTTTGGGTTGAGTTCTTTTTTTCGCGGAGGCAAAGAAAAGAAGAGTAGAAAGTAA

mRNA sequence

ATGTGCTCGACAAAATGTCCACCTGGGATTTCACTCTCAAATGATCTTGTTCTTTCAGAGATGTTGCCTATCCAACCTCGTGAATCTTCTGAATTTGAGTTTTGTGTCGGTGGTTGCTTTGAGTATGAATCTTCTTCTGCTGACGAGCTCTTCTTCAATGGCGTCATCATTCCCACTCAGAATCATCAGAGGTTTGTGCACGGTAAACAAACTCATCAACGTGAGAGTCCCCCAATTTTACCTTCCTCGCTTCCTCCTCTTCCTCCTGCTGTGGCAACAGAGAATTCAAAGAAAGATAACACAGAGGAATTAGTTCATGTGGTGAATTCTGAGTCTGAGAAGAAAAGTCGGTCCAAATCTTTCTGGGGGTTTCGAAGAAGTAATAGTGTTACTTATGACAGTAGAAAGACTTCATTTTGCTCGCTACCACTTTTATCAAGAAGCAATTCTACTGGTTCAGTCCAAAACCCAAAACGAACGCCATTGAAGGATGTGAAAAGCCACAATCCTGTGCTGCAGAAACAGCATTCAGTTTCAGAGGGAAATTCAAAATCCTCATTTTTAGCATCCCCATTTTCAAACTCTGCTGCAAATTCATATTCAAAACTCCAAAAGGGTCTGAAGAAGAATCAGGGAGGGTTTTATGGGAACAATCTCTATGTAAACCCCATTTTGAATGTGCCACCTCCTTACATCACCAAAGAAACTGCAAACATCTTTGGGTTGAGTTCTTTTTTTCGCGGAGGCAAAGAAAAGAAGAGTAGAAAGTAA

Coding sequence (CDS)

ATGTGCTCGACAAAATGTCCACCTGGGATTTCACTCTCAAATGATCTTGTTCTTTCAGAGATGTTGCCTATCCAACCTCGTGAATCTTCTGAATTTGAGTTTTGTGTCGGTGGTTGCTTTGAGTATGAATCTTCTTCTGCTGACGAGCTCTTCTTCAATGGCGTCATCATTCCCACTCAGAATCATCAGAGGTTTGTGCACGGTAAACAAACTCATCAACGTGAGAGTCCCCCAATTTTACCTTCCTCGCTTCCTCCTCTTCCTCCTGCTGTGGCAACAGAGAATTCAAAGAAAGATAACACAGAGGAATTAGTTCATGTGGTGAATTCTGAGTCTGAGAAGAAAAGTCGGTCCAAATCTTTCTGGGGGTTTCGAAGAAGTAATAGTGTTACTTATGACAGTAGAAAGACTTCATTTTGCTCGCTACCACTTTTATCAAGAAGCAATTCTACTGGTTCAGTCCAAAACCCAAAACGAACGCCATTGAAGGATGTGAAAAGCCACAATCCTGTGCTGCAGAAACAGCATTCAGTTTCAGAGGGAAATTCAAAATCCTCATTTTTAGCATCCCCATTTTCAAACTCTGCTGCAAATTCATATTCAAAACTCCAAAAGGGTCTGAAGAAGAATCAGGGAGGGTTTTATGGGAACAATCTCTATGTAAACCCCATTTTGAATGTGCCACCTCCTTACATCACCAAAGAAACTGCAAACATCTTTGGGTTGAGTTCTTTTTTTCGCGGAGGCAAAGAAAAGAAGAGTAGAAAGTAA

Protein sequence

MCSTKCPPGISLSNDLVLSEMLPIQPRESSEFEFCVGGCFEYESSSADELFFNGVIIPTQNHQRFVHGKQTHQRESPPILPSSLPPLPPAVATENSKKDNTEELVHVVNSESEKKSRSKSFWGFRRSNSVTYDSRKTSFCSLPLLSRSNSTGSVQNPKRTPLKDVKSHNPVLQKQHSVSEGNSKSSFLASPFSNSAANSYSKLQKGLKKNQGGFYGNNLYVNPILNVPPPYITKETANIFGLSSFFRGGKEKKSRK
Homology
BLAST of Clc06G15840 vs. NCBI nr
Match: XP_038898781.1 (uncharacterized protein LOC120086289 [Benincasa hispida])

HSP 1 Score: 458.8 bits (1179), Expect = 3.2e-125
Identity = 236/258 (91.47%), Postives = 242/258 (93.80%), Query Frame = 0

Query: 1   MCSTKCPPGISLSNDLVLSEMLPIQPRESSEFEFCVGGCFEYESSSADELFFNGVIIPTQ 60
           MCSTKCPPGISLSNDLVLSE+LPIQPRESSEFEFCV GCFEYESSSADELFFNGVIIPTQ
Sbjct: 1   MCSTKCPPGISLSNDLVLSEILPIQPRESSEFEFCVSGCFEYESSSADELFFNGVIIPTQ 60

Query: 61  NHQRFVHGKQTHQRESPPILPSSLPPLPPAVATENSKKDNTEELVHVVNSESEKKSRSKS 120
           NH RFVH K++HQ +S PILPSSLPPLPP VATENSKK+NTEELVH VNSE EKK+RSKS
Sbjct: 61  NHHRFVHSKRSHQHDS-PILPSSLPPLPPVVATENSKKENTEELVHGVNSEFEKKTRSKS 120

Query: 121 FWGFRRSNSVTYDSRKTSFCSLPLLSRSNSTGSVQNPKRTPLKDVKSHNPVLQKQHSVSE 180
           FWGFRRSNSVTYDSRKTSFCSLPLLSRSNSTGSVQNPKRTPLKDVKSHNPVLQKQHSVSE
Sbjct: 121 FWGFRRSNSVTYDSRKTSFCSLPLLSRSNSTGSVQNPKRTPLKDVKSHNPVLQKQHSVSE 180

Query: 181 GNSKSSFLASPFSNSAANSYSKLQKGLKKNQGGFY--GNNLYVNPILNVPPPYITKETAN 240
           GNSKSSF  SPFSNSAANSYSKLQK  KKNQGGFY  GNNL VNPILNVPPPYITKETAN
Sbjct: 181 GNSKSSFFTSPFSNSAANSYSKLQKAQKKNQGGFYGKGNNLSVNPILNVPPPYITKETAN 240

Query: 241 IFGLSSFFRGGKEKKSRK 257
           IFGLSSF RGGKEKKSRK
Sbjct: 241 IFGLSSFLRGGKEKKSRK 257

BLAST of Clc06G15840 vs. NCBI nr
Match: XP_011660341.1 (uncharacterized protein LOC105436374 [Cucumis sativus] >KGN63833.1 hypothetical protein Csa_014046 [Cucumis sativus])

HSP 1 Score: 456.4 bits (1173), Expect = 1.6e-124
Identity = 231/255 (90.59%), Postives = 239/255 (93.73%), Query Frame = 0

Query: 1   MCSTKCPPGISLSNDLVLSEMLPIQPRESSEFEFCVGGCFEYESSSADELFFNGVIIPTQ 60
           MCSTKCPPGISLSNDLVLSE+LPIQPRESSEFEFCV GCFEYESSSADELFFNGVIIPTQ
Sbjct: 1   MCSTKCPPGISLSNDLVLSEILPIQPRESSEFEFCVSGCFEYESSSADELFFNGVIIPTQ 60

Query: 61  NHQRFVHGKQTHQRESPPILPSSLPPLPPAVATENSKKDNTEELVHVVNSESEKKSRSKS 120
           NHQ FVH K+THQRES PILPS+LPPLPPAVA ENSKK+NTEELVHVVNSESEKKSRSKS
Sbjct: 61  NHQGFVHNKRTHQRESSPILPSALPPLPPAVANENSKKENTEELVHVVNSESEKKSRSKS 120

Query: 121 FWGFRRSNSVTYDSRKTSFCSLPLLSRSNSTGSVQNPKRTPLKDVKSHNPVLQKQHSVSE 180
           FWGFRRSNSVTYDSRK SFCSLPLLSRSNSTGSVQ PKRTPLKDVK+ NP+LQKQHSVSE
Sbjct: 121 FWGFRRSNSVTYDSRKNSFCSLPLLSRSNSTGSVQTPKRTPLKDVKTQNPMLQKQHSVSE 180

Query: 181 GNSKSSFLASPFSNSAANSYSKLQKGLKKNQGGFYGNNLYVNPILNVPPPYITKETANIF 240
            NSKSSFL S FSNSA+N YSKLQK  KKNQGGFYG+NLYVNPILNVPPPYITKETANIF
Sbjct: 181 SNSKSSFLTSSFSNSASNPYSKLQKAQKKNQGGFYGSNLYVNPILNVPPPYITKETANIF 240

Query: 241 GLSSFFRGGKEKKSR 256
           GLSSF RG KEKKSR
Sbjct: 241 GLSSFLRGRKEKKSR 255

BLAST of Clc06G15840 vs. NCBI nr
Match: XP_016901379.1 (PREDICTED: uncharacterized protein LOC103494135 [Cucumis melo])

HSP 1 Score: 456.1 bits (1172), Expect = 2.0e-124
Identity = 232/255 (90.98%), Postives = 240/255 (94.12%), Query Frame = 0

Query: 1   MCSTKCPPGISLSNDLVLSEMLPIQPRESSEFEFCVGGCFEYESSSADELFFNGVIIPTQ 60
           MCSTKCPPGISLSNDLVLSE+LPIQPRESSEFEFCV GCFEYESSSADELFFNGVIIPTQ
Sbjct: 1   MCSTKCPPGISLSNDLVLSEILPIQPRESSEFEFCVSGCFEYESSSADELFFNGVIIPTQ 60

Query: 61  NHQRFVHGKQTHQRESPPILPSSLPPLPPAVATENSKKDNTEELVHVVNSESEKKSRSKS 120
           NHQRFVH K+THQRES PILPS+LPPLPPAV  ENSK  NTEELVHVV+SESEKKSRSKS
Sbjct: 61  NHQRFVHNKRTHQRESSPILPSALPPLPPAVVNENSK--NTEELVHVVSSESEKKSRSKS 120

Query: 121 FWGFRRSNSVTYDSRKTSFCSLPLLSRSNSTGSVQNPKRTPLKDVKSHNPVLQKQHSVSE 180
           FWGFRRSNSVTYDSRK SFCSLPLLSRSNSTGSVQ PKRTPLKDVK+ NP+LQKQHSVSE
Sbjct: 121 FWGFRRSNSVTYDSRKNSFCSLPLLSRSNSTGSVQTPKRTPLKDVKTQNPMLQKQHSVSE 180

Query: 181 GNSKSSFLASPFSNSAANSYSKLQKGLKKNQGGFYGNNLYVNPILNVPPPYITKETANIF 240
            NSKSSFL SPFSNSA+NSYSKLQK  KKNQGGFYG+NLYVNPILNVPPPYITKETANIF
Sbjct: 181 SNSKSSFLTSPFSNSASNSYSKLQKAQKKNQGGFYGSNLYVNPILNVPPPYITKETANIF 240

Query: 241 GLSSFFRGGKEKKSR 256
           GLSSF RGGKEKKSR
Sbjct: 241 GLSSFLRGGKEKKSR 253

BLAST of Clc06G15840 vs. NCBI nr
Match: KAA0058088.1 (vitellogenin-2 [Cucumis melo var. makuwa] >TYK28441.1 vitellogenin-2 [Cucumis melo var. makuwa])

HSP 1 Score: 456.1 bits (1172), Expect = 2.0e-124
Identity = 232/255 (90.98%), Postives = 240/255 (94.12%), Query Frame = 0

Query: 1   MCSTKCPPGISLSNDLVLSEMLPIQPRESSEFEFCVGGCFEYESSSADELFFNGVIIPTQ 60
           MCSTKCPPGISLSNDLVLSE+LPIQPRESSEFEFCV GCFEYESSSADELFFNGVIIPTQ
Sbjct: 1   MCSTKCPPGISLSNDLVLSEILPIQPRESSEFEFCVSGCFEYESSSADELFFNGVIIPTQ 60

Query: 61  NHQRFVHGKQTHQRESPPILPSSLPPLPPAVATENSKKDNTEELVHVVNSESEKKSRSKS 120
           NHQRFVH K+THQRES PILPS+LPPLPPAV  ENSK  NTEELVHVV+SESEKKSRSKS
Sbjct: 61  NHQRFVHNKRTHQRESSPILPSALPPLPPAVVNENSK--NTEELVHVVSSESEKKSRSKS 120

Query: 121 FWGFRRSNSVTYDSRKTSFCSLPLLSRSNSTGSVQNPKRTPLKDVKSHNPVLQKQHSVSE 180
           FWGFRRSNSVTYDSRK SFCSLPLLSRSNSTGSVQ PKRTPLKDVK+ NP+LQKQHSVSE
Sbjct: 121 FWGFRRSNSVTYDSRKNSFCSLPLLSRSNSTGSVQTPKRTPLKDVKTQNPMLQKQHSVSE 180

Query: 181 GNSKSSFLASPFSNSAANSYSKLQKGLKKNQGGFYGNNLYVNPILNVPPPYITKETANIF 240
            NSKSSFL SPFSNSA+NSYSKLQK  KKNQGGFYG+NLYVNPILNVPPPYITKETANIF
Sbjct: 181 SNSKSSFLTSPFSNSASNSYSKLQKAQKKNQGGFYGSNLYVNPILNVPPPYITKETANIF 240

Query: 241 GLSSFFRGGKEKKSR 256
           GLSSF RGGKEKKSR
Sbjct: 241 GLSSFLRGGKEKKSR 253

BLAST of Clc06G15840 vs. NCBI nr
Match: XP_022134776.1 (uncharacterized protein LOC111006964 [Momordica charantia])

HSP 1 Score: 396.7 bits (1018), Expect = 1.5e-106
Identity = 213/263 (80.99%), Postives = 225/263 (85.55%), Query Frame = 0

Query: 1   MCSTKCPPGISL-----SNDLVLSEMLPIQPRESSEFEFCVGGCFEYESSSADELFFNGV 60
           MCSTKCP GISL       DL L + +       SEFEFCVGG FE+ESSSADELFFNGV
Sbjct: 1   MCSTKCPTGISLPVHESPRDLSLLDSI-------SEFEFCVGGSFEHESSSADELFFNGV 60

Query: 61  IIPTQNHQRFVHGKQTHQRESPPILPSSLPPLPPAVATENSKKDNTEELVHVVNSESEKK 120
           I+PTQN QRFVH K+TH RES P LPSSLPPLPPA ATENSKK+NTEELVHVVNSESEKK
Sbjct: 61  IVPTQNQQRFVHSKRTHPRESAPFLPSSLPPLPPAAATENSKKENTEELVHVVNSESEKK 120

Query: 121 SRSKSFWGFRRSNSVTYDSRKTSFCSLPLLSRSNSTGSVQNPKRTPLKDVKSHNPVLQKQ 180
           SRSKSFWGF RSNSVTYDSRK+S CSLPLLSRSNSTGSVQNPKRTPLKDVK  +P+LQ+Q
Sbjct: 121 SRSKSFWGFGRSNSVTYDSRKSSLCSLPLLSRSNSTGSVQNPKRTPLKDVKGQSPLLQRQ 180

Query: 181 HSVSEGNSKSSFLASPFSNSAANSYSKLQK-GLKKNQGGFYGNNLYVNPILNVPPPYITK 240
           HSVSEG SKSSFLA PFSNSAANSYSKLQK   KKNQGGFYGNNL +NPILNVPPPYITK
Sbjct: 181 HSVSEGKSKSSFLAPPFSNSAANSYSKLQKPHHKKNQGGFYGNNLCINPILNVPPPYITK 240

Query: 241 ETANIFGLSSFFR-GGKEKKSRK 257
           ETANIFGLSS  R GGKEKK+RK
Sbjct: 241 ETANIFGLSSLLRGGGKEKKNRK 256

BLAST of Clc06G15840 vs. ExPASy TrEMBL
Match: A0A0A0LPT8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G024190 PE=4 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 7.6e-125
Identity = 231/255 (90.59%), Postives = 239/255 (93.73%), Query Frame = 0

Query: 1   MCSTKCPPGISLSNDLVLSEMLPIQPRESSEFEFCVGGCFEYESSSADELFFNGVIIPTQ 60
           MCSTKCPPGISLSNDLVLSE+LPIQPRESSEFEFCV GCFEYESSSADELFFNGVIIPTQ
Sbjct: 1   MCSTKCPPGISLSNDLVLSEILPIQPRESSEFEFCVSGCFEYESSSADELFFNGVIIPTQ 60

Query: 61  NHQRFVHGKQTHQRESPPILPSSLPPLPPAVATENSKKDNTEELVHVVNSESEKKSRSKS 120
           NHQ FVH K+THQRES PILPS+LPPLPPAVA ENSKK+NTEELVHVVNSESEKKSRSKS
Sbjct: 61  NHQGFVHNKRTHQRESSPILPSALPPLPPAVANENSKKENTEELVHVVNSESEKKSRSKS 120

Query: 121 FWGFRRSNSVTYDSRKTSFCSLPLLSRSNSTGSVQNPKRTPLKDVKSHNPVLQKQHSVSE 180
           FWGFRRSNSVTYDSRK SFCSLPLLSRSNSTGSVQ PKRTPLKDVK+ NP+LQKQHSVSE
Sbjct: 121 FWGFRRSNSVTYDSRKNSFCSLPLLSRSNSTGSVQTPKRTPLKDVKTQNPMLQKQHSVSE 180

Query: 181 GNSKSSFLASPFSNSAANSYSKLQKGLKKNQGGFYGNNLYVNPILNVPPPYITKETANIF 240
            NSKSSFL S FSNSA+N YSKLQK  KKNQGGFYG+NLYVNPILNVPPPYITKETANIF
Sbjct: 181 SNSKSSFLTSSFSNSASNPYSKLQKAQKKNQGGFYGSNLYVNPILNVPPPYITKETANIF 240

Query: 241 GLSSFFRGGKEKKSR 256
           GLSSF RG KEKKSR
Sbjct: 241 GLSSFLRGRKEKKSR 255

BLAST of Clc06G15840 vs. ExPASy TrEMBL
Match: A0A5A7USG1 (Vitellogenin-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00730 PE=4 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 9.9e-125
Identity = 232/255 (90.98%), Postives = 240/255 (94.12%), Query Frame = 0

Query: 1   MCSTKCPPGISLSNDLVLSEMLPIQPRESSEFEFCVGGCFEYESSSADELFFNGVIIPTQ 60
           MCSTKCPPGISLSNDLVLSE+LPIQPRESSEFEFCV GCFEYESSSADELFFNGVIIPTQ
Sbjct: 1   MCSTKCPPGISLSNDLVLSEILPIQPRESSEFEFCVSGCFEYESSSADELFFNGVIIPTQ 60

Query: 61  NHQRFVHGKQTHQRESPPILPSSLPPLPPAVATENSKKDNTEELVHVVNSESEKKSRSKS 120
           NHQRFVH K+THQRES PILPS+LPPLPPAV  ENSK  NTEELVHVV+SESEKKSRSKS
Sbjct: 61  NHQRFVHNKRTHQRESSPILPSALPPLPPAVVNENSK--NTEELVHVVSSESEKKSRSKS 120

Query: 121 FWGFRRSNSVTYDSRKTSFCSLPLLSRSNSTGSVQNPKRTPLKDVKSHNPVLQKQHSVSE 180
           FWGFRRSNSVTYDSRK SFCSLPLLSRSNSTGSVQ PKRTPLKDVK+ NP+LQKQHSVSE
Sbjct: 121 FWGFRRSNSVTYDSRKNSFCSLPLLSRSNSTGSVQTPKRTPLKDVKTQNPMLQKQHSVSE 180

Query: 181 GNSKSSFLASPFSNSAANSYSKLQKGLKKNQGGFYGNNLYVNPILNVPPPYITKETANIF 240
            NSKSSFL SPFSNSA+NSYSKLQK  KKNQGGFYG+NLYVNPILNVPPPYITKETANIF
Sbjct: 181 SNSKSSFLTSPFSNSASNSYSKLQKAQKKNQGGFYGSNLYVNPILNVPPPYITKETANIF 240

Query: 241 GLSSFFRGGKEKKSR 256
           GLSSF RGGKEKKSR
Sbjct: 241 GLSSFLRGGKEKKSR 253

BLAST of Clc06G15840 vs. ExPASy TrEMBL
Match: A0A1S4DZJ3 (uncharacterized protein LOC103494135 OS=Cucumis melo OX=3656 GN=LOC103494135 PE=4 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 9.9e-125
Identity = 232/255 (90.98%), Postives = 240/255 (94.12%), Query Frame = 0

Query: 1   MCSTKCPPGISLSNDLVLSEMLPIQPRESSEFEFCVGGCFEYESSSADELFFNGVIIPTQ 60
           MCSTKCPPGISLSNDLVLSE+LPIQPRESSEFEFCV GCFEYESSSADELFFNGVIIPTQ
Sbjct: 1   MCSTKCPPGISLSNDLVLSEILPIQPRESSEFEFCVSGCFEYESSSADELFFNGVIIPTQ 60

Query: 61  NHQRFVHGKQTHQRESPPILPSSLPPLPPAVATENSKKDNTEELVHVVNSESEKKSRSKS 120
           NHQRFVH K+THQRES PILPS+LPPLPPAV  ENSK  NTEELVHVV+SESEKKSRSKS
Sbjct: 61  NHQRFVHNKRTHQRESSPILPSALPPLPPAVVNENSK--NTEELVHVVSSESEKKSRSKS 120

Query: 121 FWGFRRSNSVTYDSRKTSFCSLPLLSRSNSTGSVQNPKRTPLKDVKSHNPVLQKQHSVSE 180
           FWGFRRSNSVTYDSRK SFCSLPLLSRSNSTGSVQ PKRTPLKDVK+ NP+LQKQHSVSE
Sbjct: 121 FWGFRRSNSVTYDSRKNSFCSLPLLSRSNSTGSVQTPKRTPLKDVKTQNPMLQKQHSVSE 180

Query: 181 GNSKSSFLASPFSNSAANSYSKLQKGLKKNQGGFYGNNLYVNPILNVPPPYITKETANIF 240
            NSKSSFL SPFSNSA+NSYSKLQK  KKNQGGFYG+NLYVNPILNVPPPYITKETANIF
Sbjct: 181 SNSKSSFLTSPFSNSASNSYSKLQKAQKKNQGGFYGSNLYVNPILNVPPPYITKETANIF 240

Query: 241 GLSSFFRGGKEKKSR 256
           GLSSF RGGKEKKSR
Sbjct: 241 GLSSFLRGGKEKKSR 253

BLAST of Clc06G15840 vs. ExPASy TrEMBL
Match: A0A6J1BYR0 (uncharacterized protein LOC111006964 OS=Momordica charantia OX=3673 GN=LOC111006964 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 7.1e-107
Identity = 213/263 (80.99%), Postives = 225/263 (85.55%), Query Frame = 0

Query: 1   MCSTKCPPGISL-----SNDLVLSEMLPIQPRESSEFEFCVGGCFEYESSSADELFFNGV 60
           MCSTKCP GISL       DL L + +       SEFEFCVGG FE+ESSSADELFFNGV
Sbjct: 1   MCSTKCPTGISLPVHESPRDLSLLDSI-------SEFEFCVGGSFEHESSSADELFFNGV 60

Query: 61  IIPTQNHQRFVHGKQTHQRESPPILPSSLPPLPPAVATENSKKDNTEELVHVVNSESEKK 120
           I+PTQN QRFVH K+TH RES P LPSSLPPLPPA ATENSKK+NTEELVHVVNSESEKK
Sbjct: 61  IVPTQNQQRFVHSKRTHPRESAPFLPSSLPPLPPAAATENSKKENTEELVHVVNSESEKK 120

Query: 121 SRSKSFWGFRRSNSVTYDSRKTSFCSLPLLSRSNSTGSVQNPKRTPLKDVKSHNPVLQKQ 180
           SRSKSFWGF RSNSVTYDSRK+S CSLPLLSRSNSTGSVQNPKRTPLKDVK  +P+LQ+Q
Sbjct: 121 SRSKSFWGFGRSNSVTYDSRKSSLCSLPLLSRSNSTGSVQNPKRTPLKDVKGQSPLLQRQ 180

Query: 181 HSVSEGNSKSSFLASPFSNSAANSYSKLQK-GLKKNQGGFYGNNLYVNPILNVPPPYITK 240
           HSVSEG SKSSFLA PFSNSAANSYSKLQK   KKNQGGFYGNNL +NPILNVPPPYITK
Sbjct: 181 HSVSEGKSKSSFLAPPFSNSAANSYSKLQKPHHKKNQGGFYGNNLCINPILNVPPPYITK 240

Query: 241 ETANIFGLSSFFR-GGKEKKSRK 257
           ETANIFGLSS  R GGKEKK+RK
Sbjct: 241 ETANIFGLSSLLRGGGKEKKNRK 256

BLAST of Clc06G15840 vs. ExPASy TrEMBL
Match: A0A6J1ERX4 (uncharacterized protein LOC111436997 OS=Cucurbita moschata OX=3662 GN=LOC111436997 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 9.4e-91
Identity = 185/247 (74.90%), Postives = 201/247 (81.38%), Query Frame = 0

Query: 21  MLPIQPRES-----------SEFEFCVGGCFEYESSSADELFFNGVIIPTQNHQRFVHGK 80
           MLPIQPRES           SEFEFCV G F+YESSSADELFFNGVI+PTQN Q+FV  K
Sbjct: 1   MLPIQPRESPSTDISLLDSNSEFEFCVSGSFDYESSSADELFFNGVIVPTQNQQKFVQIK 60

Query: 81  QTHQRESPPILPSSLPPLPPAVATENSKKDNTEELVHVVNSESEKKSRSKSFWGFRRSNS 140
           +THQRES P  PSSLPPLPPAVATEN KK NTEE +HV+NS+SEKK+RSKSFWGFRRSNS
Sbjct: 61  RTHQRESAPCFPSSLPPLPPAVATENFKKVNTEEPIHVMNSDSEKKNRSKSFWGFRRSNS 120

Query: 141 VTYDSRKTSFCSLPLLSRSNSTGSVQNPKRTPLKDVKSHNPVLQKQHSVSEGNSKSSFLA 200
           VTYD+RK+SF SLPLLSRS STGSVQ PK  P KDVKS +P LQ+ HSVSEG SK     
Sbjct: 121 VTYDNRKSSFFSLPLLSRSYSTGSVQIPKGMPSKDVKSQSPQLQRHHSVSEGKSK----- 180

Query: 201 SPFSNSAANSYSKLQKGLKKNQGGFYGNNLYVNPILNVPPPYITKETANIFGLSSFFRGG 257
            P S+SAANS+SKLQK  KKNQGG YGNNLYVNPILNVPPPYITKET+ IFGLSS  RG 
Sbjct: 181 LPSSSSAANSHSKLQKPQKKNQGGLYGNNLYVNPILNVPPPYITKETSKIFGLSSLLRGS 240

BLAST of Clc06G15840 vs. TAIR 10
Match: AT1G67050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38320.1); Has 617 Blast hits to 318 proteins in 80 species: Archae - 0; Bacteria - 16; Metazoa - 141; Fungi - 62; Plants - 128; Viruses - 2; Other Eukaryotes - 268 (source: NCBI BLink). )

HSP 1 Score: 106.7 bits (265), Expect = 2.8e-23
Identity = 90/274 (32.85%), Postives = 135/274 (49.27%), Query Frame = 0

Query: 8   PGISLSNDLVLSEMLPIQPR-------------ESSEFEFCV------GGCFEYESSSAD 67
           P IS S D   S+ +PI+ R              S +F+FC+      G  F+  S SAD
Sbjct: 14  PRISFSRDFCQSDAIPIEKRPLRSSNSKPSSLNSSIDFDFCIPGGVNSGESFDQGSWSAD 73

Query: 68  ELFFNGVIIPTQNHQRFVHGKQTHQRESPPILPSSLPPLPPAVATENSKKDNTEELVHVV 127
           ELF NG I+PT+  ++   GK+          P   P      + +  K+ N E+    V
Sbjct: 74  ELFSNGKILPTEIKKKPEPGKKE---------PEPKPVKSKPDSRKQRKQPNEEQQEDDV 133

Query: 128 NSESEKKSRSKSFWGFRRSNSVTYDSR-KTSFCSLPLLSRSNSTGSVQNPKRTPLKDVKS 187
              +E+K+ +KSFWGF+RS+S+   S    S C LPLL+RSNSTGS  + ++       +
Sbjct: 134 IITTEEKTNTKSFWGFKRSSSLNCGSTYGRSLCPLPLLNRSNSTGSTSSKQKQSSSRKHN 193

Query: 188 HNPVLQKQHSVSEGNSKSSFLASPFSNSAANSYSKLQKGLKKNQGGFY-----GNNLYVN 247
            +  LQ+  S+S  +S SS L++       N +SK    LKK+ GG+      G  + V+
Sbjct: 194 EHVKLQQSSSLSSSSSASSSLSN-------NGFSK--PPLKKSYGGYSYGSHGGGGIRVS 253

Query: 248 PILNVPPPYITKETANIFGLSSFFRGGKEKKSRK 257
           P++NV P      + N+FG  S F G    K++K
Sbjct: 254 PVINVVP------SGNLFGFGSMFSGNGRDKNKK 263

BLAST of Clc06G15840 vs. TAIR 10
Match: AT3G18300.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48780.1); Has 69 Blast hits to 69 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 105.5 bits (262), Expect = 6.3e-23
Identity = 89/244 (36.48%), Postives = 131/244 (53.69%), Query Frame = 0

Query: 29  SSEFEFCVGGCFE-YESSSADELFFNGVIIPTQNHQ---RFVHGKQTHQRESPPI----- 88
           +S+FEF +   F+  +SS ADE+F +G+I+P    Q        K+ ++ E PPI     
Sbjct: 45  NSDFEFHISSNFDPGDSSPADEIFADGMILPVLPFQVTATSTMPKRLYKYELPPIVSAPT 104

Query: 89  LPSSLPPLPPAVATENSKKDNTEELVHVV-------NSESEKKSRSKSFWGFRRSNSVTY 148
           L S LPPLP  +  E+S+K + +E    +       NS+SE +  SKSFW F+RS+S+  
Sbjct: 105 LSSYLPPLPLPL-PEHSRKYSVKETRGSLNGRGSGANSDSEAEKSSKSFWSFKRSSSLNC 164

Query: 149 DSRKTSFCSLPLLSRSNSTGSVQNPKRTPLKDVKSHNPVLQKQHSVSE-GNSKSSFLASP 208
           D +K+  CS P L+RSNSTGSV   KR  L+D+  H+    ++H V   G + SS +  P
Sbjct: 165 DIKKSLICSFPRLTRSNSTGSVAISKREMLRDINKHS---SQRHGVPRPGVNPSSHMRPP 224

Query: 209 FSNSAANSYSKLQKGLKKNQGGFYGNNLYVNPILNVPPPYITKETANIFGLSSFFRGGKE 256
            S   ++   + QK   KN GG  G + ++ P++  P P         FGL S  R  KE
Sbjct: 225 SSFCCSSYQFRPQKHAGKNGGG-RGGSFWIAPVIGGPSP---------FGLGSILRLTKE 274

BLAST of Clc06G15840 vs. TAIR 10
Match: AT1G48780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18300.1); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 102.1 bits (253), Expect = 7.0e-22
Identity = 96/275 (34.91%), Postives = 134/275 (48.73%), Query Frame = 0

Query: 1   MCSTKCPPGISLSNDLVLSEMLP---IQP------------RESSEFEFCVGGCFE-YES 60
           M  T+    IS S+DL  S+  P   I+P              +S+FEF +   F+  +S
Sbjct: 1   MICTEALQRISFSSDLGQSDKAPPPVIEPSGLIRRDETLLDSSNSDFEFHISNSFDPGDS 60

Query: 61  SSADELFFNGVIIPTQNHQRFVHGKQTHQRESPPILPSSLP-PL-PPAVATENSKKDNTE 120
           S ADE+F +G+I+P          K+ ++ E PPI  S  P PL P  + T++S+K+ T 
Sbjct: 61  SPADEIFADGMILPFHVTAASTVPKRLYKYELPPITSSLSPSPLSPQPLPTKHSEKE-TN 120

Query: 121 ELVHVVNSESEKKSRSKSFWGFRRSNSVTYDSRKTSFCSLPLLSRSNSTGSVQNPKRTPL 180
                 NS+SE +  SKSFW F+RS+S+  D +K+  CS P L+RSNSTGSV N KR  L
Sbjct: 121 GRASGANSDSEAEKSSKSFWSFKRSSSLNCDIKKSLICSFPRLTRSNSTGSVTNSKRAML 180

Query: 181 KDVKSHNPVLQKQHSVSEGNSKSSFLASPFSNSAANSYS-KLQKGLKKNQGGFYGNNLYV 240
           +DV +H P           +S+S         S  N+Y  + QK   K   G  G +  V
Sbjct: 181 RDVNNHRP-----------SSRS---------SCCNAYQFRPQKHTGKKGEG--GGSFSV 240

Query: 241 NPILNVPPPYITKETANIFGLSSFFRGGKEKKSRK 257
            P+LN P         + FGL S  R    K   K
Sbjct: 241 IPVLNGP---------STFGLGSILRHSNSKDKTK 243

BLAST of Clc06G15840 vs. TAIR 10
Match: AT1G68330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48780.1); Has 155 Blast hits to 147 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 3; Plants - 126; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 59.3 bits (142), Expect = 5.2e-09
Identity = 75/234 (32.05%), Postives = 109/234 (46.58%), Query Frame = 0

Query: 30  SEFEFCVG-GCFEYESSSADELFFNGVIIPTQ-NHQRFVHGKQTHQRESPPILPSSLPPL 89
           SEF+FC G  C   E S ADELF  G I+P Q   +  +    T +      L SS    
Sbjct: 44  SEFDFCFGSSCSVQEVSPADELFSEGKILPVQIKKEESLPQTVTFRVPRSASLSSSSSSS 103

Query: 90  PPAVATENS--KKDNTEELVHVVNSESEKKSRSKSFWGFRRSNSVTYDSRKTS---FCSL 149
             + ++  +  KK   +EL+    S+ E K R   F  F+RS S+ YD  + S     S 
Sbjct: 104 SSSSSSSRAPEKKMRLKELLLNPESDFEDKPRG-LFLQFKRSISLNYDKSRNSKGLIRSF 163

Query: 150 PLLSRSNSTGSVQNPKRTPLKDVKSHNPVLQKQHSVSEGNSKSSFLASPFSNSAANSYSK 209
             LSRSNST    NP    L   ++H+P   K H++ + +      +S  S+S+   YSK
Sbjct: 164 HFLSRSNST---PNP-NLDLLPKETHHP--HKTHNLPK-HKPPLRRSSSLSSSSVPFYSK 223

Query: 210 LQKGLKKNQGGFYGNNLYVNPILNVPPP-YITKETANIFGLSSFFRGGKEKKSR 256
             K L +N  G     + V+P+LN PPP +I+      F + S   G    K++
Sbjct: 224 --KPLGRNSFGNGNGGVRVSPVLNFPPPAFISNVADGFFSIGSLCNGKTNTKTK 267

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038898781.13.2e-12591.47uncharacterized protein LOC120086289 [Benincasa hispida][more]
XP_011660341.11.6e-12490.59uncharacterized protein LOC105436374 [Cucumis sativus] >KGN63833.1 hypothetical ... [more]
XP_016901379.12.0e-12490.98PREDICTED: uncharacterized protein LOC103494135 [Cucumis melo][more]
KAA0058088.12.0e-12490.98vitellogenin-2 [Cucumis melo var. makuwa] >TYK28441.1 vitellogenin-2 [Cucumis me... [more]
XP_022134776.11.5e-10680.99uncharacterized protein LOC111006964 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LPT87.6e-12590.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G024190 PE=4 SV=1[more]
A0A5A7USG19.9e-12590.98Vitellogenin-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00730... [more]
A0A1S4DZJ39.9e-12590.98uncharacterized protein LOC103494135 OS=Cucumis melo OX=3656 GN=LOC103494135 PE=... [more]
A0A6J1BYR07.1e-10780.99uncharacterized protein LOC111006964 OS=Momordica charantia OX=3673 GN=LOC111006... [more]
A0A6J1ERX49.4e-9174.90uncharacterized protein LOC111436997 OS=Cucurbita moschata OX=3662 GN=LOC1114369... [more]
Match NameE-valueIdentityDescription
AT1G67050.12.8e-2332.85unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G18300.16.3e-2336.48unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G48780.17.0e-2234.91unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G68330.15.2e-0932.05unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..185
NoneNo IPR availablePANTHERPTHR36757BNAANNG22500D PROTEINcoord: 1..256

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc06G15840.1Clc06G15840.1mRNA