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Clc06G15830 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTATGCCGCCTGATAGATCAAACCCACTTCACAACTTCTCTTTGCCGTATCTCAAATGGGGTTCACAGAGATTCCTCAAGTGTATGAAGGTTTCTTCTAACTCCAACCCTTCTACCCTTGATCATCCTTCTATTCAACGCCAATCGAAATCCTATCAATTCCGAGCCAGACCCATCAATTCTAAGCCCACGAACTTCACCAAGCTTTCTTCTCCGATGAACCCGAATCATTCCAAACAGAAACCAACCAACGATCGAAGCAGTTCCATCGAAATTATGCGAGAGAAGATCATGCTTGATATTAGGGAGGAATCGAAGAGACTGAAGTTTTCAATTGCTGATGAAGGGGGTGAGGATGAATCTGCTGCGGCTCGGCCGTGGAATTTAAGGACTCGCAGAGCAGCATGTAAGGCTCCTCAAGACGAGAGGAATCCGGAATTGGGTTCATCTTCAACCAAGGCTGTAATGAAGAAAAAGGAGAAGAATCGGACTGCGTTATTTGTCTCGCTGTCGAAAGAGGAGCTTGAAGAGGATTTTGCGGTGCTGGTTGGTAGGTTACCGAGGAGGCCAAAGAAGAGGCCAAGAGCTGTACAAAGGCAAATGGATGTATGAATTTGGAATTTCTTTCCATTGTTCTTCTGAATTGTTTCATATTTTATCATGGGGTTTGAATGGTTATTGATTTTACTCATCATTTTGTAGGCACTTTTTCCTGGACTGTTGCTGACTGAAATTACTCTAGATTCATATAAAGTTGATGATGTTCCTGAAGCTTGAAAGGTTCCACTTGCTTTCTGTGAATTGCTGCTTTCTCTACTTTGGATATCATGATTCTTGCTGACTGCCATTTGGGAATTGGATATGCAGGTGAGATCATGAAATCATTTTGCTGGTGTGGTAACATATTCTCTGTTTCTGTTACAATAATCCCAAAAACAGGATGTGTAAATAATTAGCAAAATAAACGTTGAAGTAAATGTAAATTTTGTTTGCCAAGTTCTTGGTTGTTCTGTTCACTGTATTACTCTTAACTATCACAAATGCTATGCAATGCAAGGCATATTGGTTGTTGGGCAAGATAAACTTTACCTTTATTCAATGGGAGAAAAGTTCTAGTCAGTACATATTACCTACATTGCTGCACTCTATTTTATTATGAGAAGAGAACCCTTTATGTATTCTCTGTCAATTGCTTTGGTGGTAGCTTCAAAAGCCTGACAAGAAAGGTAAAGCCATTTTTCTCAATGGAAGAAAACTAATTTCCAAGAGCAATGGAGTTCCTTTTTATTATTATTATTATTTTCCATATATGCATTTCAGTGTGAAGCATATAGAATATTCATTGCTGCATTGTTCTGCCTTAAAATTTGACATTCTTGATTTCTGAGTCGTTCTATTTTCATTTCTTGCTTGCAACCTAGTGCATCATAAAGTGTATAATACTTTCCTTTTTCTCCTTTTTATCCTTTTTGGGGGTGGGGGAGGAATAGTCGGTACACATTGCTGAATCTTAGATGAAAAATACTTACGTGCATCATGGGTTCCACCATTTTTTTCTTTTCAACTCATTTAGTTGTCCAACCATAGTTTGTTGTGTGTAACTCTTCTTTCTTTCTTTCTTTCGATTTTTTTCTGATGTGTGGTTGAAGTGAAGAAGATAGGTGCAGTCCAAGATGCACCAAAGTATTGCTCATCCTCAATATCATTTTAGCCCAGTACATTTGTTTGTAGATTGTTTGGTTTCTATAAGGTACTTTTGTTAGGGAAAAGTTCTTCAAGGAGTTTATTCCACATGGAAATCTTCTACTCTCATTCAAGCAATTGTAGTAGTCCCTTTGGAAGAGGTCTGTAATGCTCTAATCAGTCCATCTTTAATCAGTTACTCAGCAATTTGAGTGAGATCAAGTCTTTGCTATGGGAACAAGTCAATATCTATCAGTTCATTCAGTTAGCTACAAATGATTTGTTTGGAATGACTTTCCATCGTGCATAAAAATCACTGTTTTTGCACTTAAAAGTATATTTTGAAGCACTTTGAAAGTTATTTCAAATTGGGAAGAACTTGAACTTTCTTGTATAGCTATTTGTTGAACCTTCTGCAGTCCACTGCGATCATAACAGCTTCTACTTCAACATCCGAGTTACCGGGTTCAACTTGTTGGCCACCATGAACCAATATTGTCATTTACAAGATATGGAGCAACTTTCGGGTATTATAGATTTTCCTCGTCCTTTTCGAAAATAATCTATTTTCACTCCTAAGCTTGTTAAGTTGTATTAATTTCAACTTAGACTTTCAATTTCATCAAATTGGACTCTAGACTTAGTCATATGTTACAATTTTTACATCCCATTCAATATTCAATTTTGATTCCATCGACGTATTGATGAAAATTTAATACTATGGGTGCTTCTACTGTTCATTTATAATGACTTTGTTGGCTAAAATTCAGTGTAGCATGATGCCATTAATTGTGTAAAGTAATCGTAGGGATATGTTGCTTTTAAACAGTTGGGTGTTAGCTTTACTGTTAAACTATTATTATTCTGTTTAGTTAGTTGGCTAATTATTCCTTTTCCTCTCTTCACTAAATCATTGCACCATACTATAATTCTTAAGATGGTAGCAAAGCTTTAAAGCTTACTGTTGCAGAAATATATGAATAGAAAAAAAAGGTGCTTGTGGATATCCTCAGAGCCTGAGCATGATATCAATAAGAGATTCAACAATGATGTAGTTAAGTCAAAGCGAGCATAA ATGGCTATGCCGCCTGATAGATCAAACCCACTTCACAACTTCTCTTTGCCGTATCTCAAATGGGGTTCACAGAGATTCCTCAAGTGTATGAAGGTTTCTTCTAACTCCAACCCTTCTACCCTTGATCATCCTTCTATTCAACGCCAATCGAAATCCTATCAATTCCGAGCCAGACCCATCAATTCTAAGCCCACGAACTTCACCAAGCTTTCTTCTCCGATGAACCCGAATCATTCCAAACAGAAACCAACCAACGATCGAAGCAGTTCCATCGAAATTATGCGAGAGAAGATCATGCTTGATATTAGGGAGGAATCGAAGAGACTGAAGTTTTCAATTGCTGATGAAGGGGGTGAGGATGAATCTGCTGCGGCTCGGCCGTGGAATTTAAGGACTCGCAGAGCAGCATGTAAGGCTCCTCAAGACGAGAGGAATCCGGAATTGGGTTCATCTTCAACCAAGGCTGTAATGAAGAAAAAGGAGAAGAATCGGACTGCGTTATTTGTCTCGCTGTCGAAAGAGGAGCTTGAAGAGGATTTTGCGGTGCTGGTTGGTAGGTTACCGAGGAGGCCAAAGAAGAGGCCAAGAGCTGTACAAAGGCAAATGGATGCACTTTTTCCTGGACTCTTGAAAGGTGAGATCATGAAATCATTTTGCTGGTGTGTCCACTGCGATCATAACAGCTTCTACTTCAACATCCGAGTTACCGGGTTCAACTTGTTGGCCACCATGAACCAATATTGTCATTTACAAGATATGGAGCAACTTTCGGAGCCTGAGCATGATATCAATAAGAGATTCAACAATGATGTAGTTAAGTCAAAGCGAGCATAA ATGGCTATGCCGCCTGATAGATCAAACCCACTTCACAACTTCTCTTTGCCGTATCTCAAATGGGGTTCACAGAGATTCCTCAAGTGTATGAAGGTTTCTTCTAACTCCAACCCTTCTACCCTTGATCATCCTTCTATTCAACGCCAATCGAAATCCTATCAATTCCGAGCCAGACCCATCAATTCTAAGCCCACGAACTTCACCAAGCTTTCTTCTCCGATGAACCCGAATCATTCCAAACAGAAACCAACCAACGATCGAAGCAGTTCCATCGAAATTATGCGAGAGAAGATCATGCTTGATATTAGGGAGGAATCGAAGAGACTGAAGTTTTCAATTGCTGATGAAGGGGGTGAGGATGAATCTGCTGCGGCTCGGCCGTGGAATTTAAGGACTCGCAGAGCAGCATGTAAGGCTCCTCAAGACGAGAGGAATCCGGAATTGGGTTCATCTTCAACCAAGGCTGTAATGAAGAAAAAGGAGAAGAATCGGACTGCGTTATTTGTCTCGCTGTCGAAAGAGGAGCTTGAAGAGGATTTTGCGGTGCTGGTTGGTAGGTTACCGAGGAGGCCAAAGAAGAGGCCAAGAGCTGTACAAAGGCAAATGGATGCACTTTTTCCTGGACTCTTGAAAGGTGAGATCATGAAATCATTTTGCTGGTGTGTCCACTGCGATCATAACAGCTTCTACTTCAACATCCGAGTTACCGGGTTCAACTTGTTGGCCACCATGAACCAATATTGTCATTTACAAGATATGGAGCAACTTTCGGAGCCTGAGCATGATATCAATAAGAGATTCAACAATGATGTAGTTAAGTCAAAGCGAGCATAA MAMPPDRSNPLHNFSLPYLKWGSQRFLKCMKVSSNSNPSTLDHPSIQRQSKSYQFRARPINSKPTNFTKLSSPMNPNHSKQKPTNDRSSSIEIMREKIMLDIREESKRLKFSIADEGGEDESAAARPWNLRTRRAACKAPQDERNPELGSSSTKAVMKKKEKNRTALFVSLSKEELEEDFAVLVGRLPRRPKKRPRAVQRQMDALFPGLLKGEIMKSFCWCVHCDHNSFYFNIRVTGFNLLATMNQYCHLQDMEQLSEPEHDINKRFNNDVVKSKRA Homology
BLAST of Clc06G15830 vs. NCBI nr
Match: XP_038898793.1 (uncharacterized protein LOC120086296 [Benincasa hispida]) HSP 1 Score: 401.0 bits (1029), Expect = 8.5e-108 Identity = 204/214 (95.33%), Postives = 210/214 (98.13%), Query Frame = 0
BLAST of Clc06G15830 vs. NCBI nr
Match: XP_004137319.1 (uncharacterized protein LOC101214785 [Cucumis sativus]) HSP 1 Score: 375.9 bits (964), Expect = 2.9e-100 Identity = 194/214 (90.65%), Postives = 203/214 (94.86%), Query Frame = 0
BLAST of Clc06G15830 vs. NCBI nr
Match: XP_008453422.1 (PREDICTED: uncharacterized protein LOC103494136 [Cucumis melo] >KAA0058089.1 DUF1639 domain-containing protein [Cucumis melo var. makuwa] >TYK28442.1 DUF1639 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 374.4 bits (960), Expect = 8.5e-100 Identity = 193/214 (90.19%), Postives = 201/214 (93.93%), Query Frame = 0
BLAST of Clc06G15830 vs. NCBI nr
Match: XP_022134637.1 (uncharacterized protein LOC111006857 [Momordica charantia]) HSP 1 Score: 312.0 bits (798), Expect = 5.2e-81 Identity = 168/216 (77.78%), Postives = 185/216 (85.65%), Query Frame = 0
BLAST of Clc06G15830 vs. NCBI nr
Match: XP_023515545.1 (uncharacterized protein LOC111779669 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 310.5 bits (794), Expect = 1.5e-80 Identity = 172/219 (78.54%), Postives = 183/219 (83.56%), Query Frame = 0
BLAST of Clc06G15830 vs. ExPASy TrEMBL
Match: A0A0A0LS42 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G024200 PE=4 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 1.4e-100 Identity = 194/214 (90.65%), Postives = 203/214 (94.86%), Query Frame = 0
BLAST of Clc06G15830 vs. ExPASy TrEMBL
Match: A0A5A7UX47 (DUF1639 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00740 PE=4 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 4.1e-100 Identity = 193/214 (90.19%), Postives = 201/214 (93.93%), Query Frame = 0
BLAST of Clc06G15830 vs. ExPASy TrEMBL
Match: A0A1S3BXD4 (uncharacterized protein LOC103494136 OS=Cucumis melo OX=3656 GN=LOC103494136 PE=4 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 4.1e-100 Identity = 193/214 (90.19%), Postives = 201/214 (93.93%), Query Frame = 0
BLAST of Clc06G15830 vs. ExPASy TrEMBL
Match: A0A6J1C056 (uncharacterized protein LOC111006857 OS=Momordica charantia OX=3673 GN=LOC111006857 PE=4 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 2.5e-81 Identity = 168/216 (77.78%), Postives = 185/216 (85.65%), Query Frame = 0
BLAST of Clc06G15830 vs. ExPASy TrEMBL
Match: A0A6J1E256 (uncharacterized protein LOC111429881 OS=Cucurbita moschata OX=3662 GN=LOC111429881 PE=4 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 2.1e-80 Identity = 169/217 (77.88%), Postives = 179/217 (82.49%), Query Frame = 0
BLAST of Clc06G15830 vs. TAIR 10
Match: AT3G18295.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 125.2 bits (313), Expect = 8.4e-29 Identity = 90/231 (38.96%), Postives = 121/231 (52.38%), Query Frame = 0
BLAST of Clc06G15830 vs. TAIR 10
Match: AT1G25370.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 104.0 bits (258), Expect = 2.0e-22 Identity = 88/252 (34.92%), Postives = 123/252 (48.81%), Query Frame = 0
BLAST of Clc06G15830 vs. TAIR 10
Match: AT1G48770.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 92.4 bits (228), Expect = 6.0e-19 Identity = 72/225 (32.00%), Postives = 106/225 (47.11%), Query Frame = 0
BLAST of Clc06G15830 vs. TAIR 10
Match: AT1G68340.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 85.9 bits (211), Expect = 5.6e-17 Identity = 79/229 (34.50%), Postives = 114/229 (49.78%), Query Frame = 0
BLAST of Clc06G15830 vs. TAIR 10
Match: AT3G60410.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 58.9 bits (141), Expect = 7.3e-09 Identity = 72/273 (26.37%), Postives = 111/273 (40.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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