Clc06G15510 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G15510
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	ras-related protein RABA6a-like
Location	ClcChr06: 26417911 .. 26423585 (+)
RNA-Seq Expression	Clc06G15510
Synteny	Clc06G15510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTAATCAAAATGATAAGTTTGAAAATTATTAATTTGAGGACAATTTATTTAAAATAAAAGAAAGAAGAAATAGAATAGTAGACAGAAGCAACACAACATTATGAGCCGAAGATGTAATTAAATAAAAAGAAAAAGAAAAATAGGAATATAAGGGAAAGTCATTCCATTAGAAAATTGGAGAAAAGGGATTAGTTTTAAAGTTTTAAGTAAGAAGCGTCTCTCTGTTTTTTTTTGGAGAGCAGAGAAAAGAAACAGAGAAATGGCGGATTCGTTGGACGAAGAGTGCGATTATCTGTTCAAGGCGGTTCTGACGGGCGATTCCGGCGTCGGAAAATCCAATCTCCTCTCTCGTTTTGCCAAAAACGAATTCCGATTCGACTCTAAACCGACGATCGGCGTCGAGTTTGCTTACCGGAATATTAAGGTCGCCGATAAGCTCATCAAAACCCAAATCTGGGACACCGCCGGCCAAGAAAGGTCAATCTTCTTCTCCCTTCTTCTTTAAAATTTTCTTTTAATCGTTTGTTTTTTTCCTCATAATATAAGATCACAAGCTAAAAAATTCTTAATTCGCTCTCTGTTTTCTTTTGATTAAGCTTTTTTTTTCTTTTTTTTTTTTTTAATAAATATAGCAAAGTTTGTGAATAATCGTGATAGACTACTACAATAGATACAGATGATAGTTTATCCCGATTTATTGCTGATAAACGATGATATTTTACTATTATTTATAAATATTTTCAACTCTTCGTACTTTTAAAATTATTTCCAAGTTTAAGTGTTGAAGAAAAAAACTAGTAGCAGCAGCAACAACAAAAACAAAATAAAAAAAAGAAGAGGGTGAAAAAGAAGTAAAATTTGTTTTAATTTAATTAACTTAGGACTATGTTTTATGTTAAAAATTTTGTATAATAACTTTTTTATATGTGTGAGTGCTCGGCTTCTTTATGCACTCTCATACGATATTAAATTCTAGGTGGGTGATCATTATAGATTGAATACATCTTCTTTTAGTACTTTATCAAACTCAATGCTCTTTATTTATCACTGAGTCAATCCACGATAGTTGTAATAATTATTATTTTATTTTATATAATTTATATTACATTACATAATACATATTCGATTTAATATTTGATGAAAATCTAAAAGCATAAAACATAATTTGTTTTTTAGTAAAACATTTATGAAGATGAGAGATTGAAGTTCTAAGCTTAAGGAAGAGAGTTTGTGCCCATTACCATTGAGTTAGACTCATTTTGACTACCGTCAAGTTAACTCCAACATTTATTTTTTATTATTTTTTTTAGTATTTTTTTTCATCATATTGCATTAATAGTGAATATTATAACATTCATAAAGAAACATCTATTAAAATAAAGAAGAAATTTCTAATTGAAAATTTATACCTTAAGTAATTGGATCATGTCTACGTTGACCAAATTCAATACTTTTGACACATGTTGTTATTTTCTTTAAATCAAGGATGAAATTTATATGATTAGTTTTTTTTTTTTTTTTCAAATTCTAATAAATATTTGAAATTATTTTAGGAATACATTAATATAATATTTGCTAAGTATATCATAAATCATAAATGAGTTATTATTTTCCCCTAAAAATCTATTATTCCTTTGGACCCTTTTATAAATTGGTTTTTATAATTTGCCCAAAAAAAAAAAAAAAAAAGATTTATGAGAATTTAAACGTTGTCTTTATTAGTTCAACAATTCACCTTAAAAGGTTTTAAGACCATAAATATTCTTCTAGGGTTTTCAGCCCCAATAATGATCAAACTTATTAGGTCAAAGTTTTGGATTAAAAAAGAGGAAATTTTGATCTTTTTGGAGGGACCCATAAACCTAAAAGAGAAATTAGACTTGTCCTCTAGTGATTGATTGATGGCTAATAATATGTCCTCAAAATTAAACTAGATATTCCTATCAAACAAAAAGTTTTAAGGAACACTGCCTCTAAATTTATAGTAATTATTATTTTTTTTTGTAATTTGTGGAGTGTAAGAATTAAATTTCCCCACTCTCGAGTTTAATAATATAAATATTGCGTCTAACATGATAATTATTAGCGTATTTATTTTAAATGACAAAATTGTTGAAAATAAAATATCGCAATCTATCTACGATAGTCTACTATATGTGTTTATCATAATACAGATATTAGTATATCACGTAGATAAACAGTAAAATTTTGCTATATTTATAAATATTTTAATTTATTTTTTATATTTAAAAACAACTCTAATTACTATTTTATTATATTTGGGATAAATTTTGGAACTAGAATCTAAAGTATTGATTAATCCTTATTTTCCTACCGAATTTTGTTCTCTCGAGTCATGAGCCACTCTTTTAATGACGCTCTTTAAAAGTCATGATATAAGGACAAAGAAACTTTTCATAAATTTAAGCCTTTTCTTTTTGGTTTATTTGATTTAAAATGATTTTATATTCAAGACATAAAGTTAAGAGCTTGTCCCAATAAGTGTTAGAATGTTTTCTTTTTCTTTTTTTTTTCTTTTTTAATAATTTTTAATGATGTGAAATTTGTACTAATTTGAGCTACAAAACATGCAGAAACATTTTATTAATTAAGTTATAAACTGTGGAGTTGTTCCATCAAATTTTACTTTTATCTTGCCCCATATTTTATTTTCTAAATGCTTGAAGCCTTTGTTTTTAATATATTTTAGCACTAATATGTATTTTTCTTATAAAAAAAGATTAACCTTTTCTTTTGTTAATTTTTCCTAGATTGGTCAATACTTATTCATTTGTATTAATGAAGAGAATATAATAAACAACACCCTTATTTTTTTTAAAAAAAACTATTTTAAATAACAAAACTGATGAAAATATTTACAACTAATAACAAATTTTGCTGTCTATCTACGATAGATCAAATAGTAGTTTATCGCAGATAGACAATGAAATTTGCTATTAATTGTAAATATTTTTAGCAGTTTTGTATCGTGATCCATCATAGATAGATAGTGAAGTTTTGTTATATTTATAAATATTTTGATTCTTTTTGCTATATTTGAAAAGAGCCCTATTTTAAATAGTATTATAATTTTTCTAGAAGTTAGATATTAGATCCTCACTCCATAATTGTTATACTAAAAGATAATAATATTAAAATTTGTGAAAATTTATTTTATTTATTTATTTGTCGGGACTTTGTGTGGGTTTATCCATTCAAAATTTTTTTATCCGTGTGTTCTTTTTATTTTGTTTGGTTTCTTTTTATGTTTCATTAATTTGTGTGGTTCCCGATTTGTGCCTTTAGCTCAAATTCTAAAGTTCTGTTCTCATTTTTGCTATTCATTGCATTGCAATAAGGAAAATAAATAAAAAATAAAAAAAAAAAGCTTTCCTTTCAAATTTTTTATGCATAATATTTAATTTTAAAAGCCAAAATAAGTTGAAGTCAACTAACATACCGTATATATTAGTGATTTGTGGTTTATTAGTGATTTGTGGTTTAAGTTAACTTTTGTCCTACTAAAAAAATTAACTTCAATATTTAGACATTAAAAGAATTGCTATAATTAATATTGTTTGTTTATTGTGAGGCAATAAATTAATTGATTGTGGAGCAAAGTTGAACTTAAATACTATCCTCCTCTTTACTACATAAATACAAAATTTAAAAAAAAAAAAAAATTGTGGTGTGACAATTTTTGATTAGGTTTAACTTGGGTGGCCCAGAAGATGAGGAACACACAAGTGTTTTTTTTCCTTGTACACCTGTTTTTCCTTTTTCTTTTAGTATTCCAATGAGGATTTGACACGTCAGAACCAAAAAAGTAAAAATGGTTGGGTAACAAGGCATCCGCAAACAAAGGACCATATGTTGCGAAGTGCGAAAAGGCAACAAGTATCTAAAGGGACTTTAACATCTTTCTCCCTTCAAAAAGACTTTGTCATCGTTAAAAAAAATAATAATAATAATAAATTAAATATTATTCATTATTTAAATAAATTACAAAACTATTGAAAATATTTACAACTAATTGTAAAATATCATAGTCTATTTGTGATAGATCGCGATAGACTATTATTTGTGTTTATCGTGACACATATAGTAGTCTATTGCAATCTGTCGCAAATAGATAGTGAAATTTTGCTATATTTGTAAATATATATATATATATATATATATATTTGTTCATTTTGCTATATTTGAAAAGAGTCCTACCACTTTAGTCCTTATATTTAAATTTTACAAACTTTCAAAAAAAAAAAAGACCCTTAAATTTAGCTTGTTTGCGGTTGATTTTTTCTTCTTCAATTTTTTATAATTTATTTATTAACATTTTCACAATAAAGTTCTTACACATCCCAATATTATATTTTCTTATCTGAAAACTATTAGTATTATTTACTTAATTTCGATAAAGATTAACTCAAATGACTAAATTTAAGATTTATTAAAAGTATGGAGACTAAAAAATTGACATACTTCAAAGTATAATGACTAAAATTATATTTTAACTAAATAAAAAAGTTTTAGAGGACGTTTAAAACAAAGGAGTAAAATGTAAAGTTGTTTAAACTGTTAGTTATTAAGGCTTAGTTTGGGATTGAGTTTTTAAAATAATTGTTGTTAACCATGCTTTTAGAAAAATCACATGCAAGAAGAAGTAAATTAGTATTTGGTAAAGTTTAATTTTAATTATTATTTTTTTTATAAAAAAAATACTAGTTACAATGTTTAGTAAATGAATACGTTTGTGTAATTTAGTTCTATGAACAAGCAGATTATCATTTCAATTATTTTTTATATTCATATTTAATTTATAATTTATTGTAATATAATTATTTAAAATTATATATGATTCCAACTAATATTATCTAATCTATTTATTTTTTTTATAAAAGATTTATTTAAAATAATTATTCTAAGAAATTTGAGAGGAGGGAGGGAAGATATCAAATTTTTACATCAAATAGTTTTAGCAGGTTAGAAAAAATTTAAAAGTGATTTTAGGTAGATTAATAAACAAGTCTAAGCGGTCAAAATTCTAATAGTGTTACGAACATACAGATTTAGGGCAATTACAAGTTCTTATTATCGAGGAGCATTGGGAGCGTTGCTTGTGTACGACATAACTCGGGTGGCTACATTTGATAACGTGAAGAAGTGGTTGCGAGAGTTGAGAGAGTTGGGAAATTCGGAGATGGTGATCATTCTGGTTGGAAACAAATGTGATTTGGATGAATCTCGAGAAGTGGAAGAGGAAGAAGCACGTGGTTTGGCAGAGTTAGAAGGCTTATTTTTCATGGAGACTTCTGCTAAGGATAATGTGAATGTAGAAGAGGCATTTCTTGGAATGGTTCGTAGGATCCATGCTATTGCATCCCAAAACACCTTGAATTTGCATAAACATATTGAAAAGCTTGTTGCTTTTCCAAATGGGAAAGAGATTGTTAGTATTCATGAAGTAACTCCAACTAAATCCAATTCATATTGTTGCTCTTTATGAAAATTTAGTTCCAAGTACCTTATAAATATTCTATTTTATAATTTATAAACATTGCGTGAAAGTCATTTTTGTTCTTTTCGTACCAAAATTAGATGATGCAAGTGTGCGATGAGTGTAGTAGCTTCCTCGAAGATACTTGTGACTCGATTGGTAAAATAGTATATTTC

mRNA sequence

AATTAATCAAAATGATAAGTTTGAAAATTATTAATTTGAGGACAATTTATTTAAAATAAAAGAAAGAAGAAATAGAATAGTAGACAGAAGCAACACAACATTATGAGCCGAAGATGTAATTAAATAAAAAGAAAAAGAAAAATAGGAATATAAGGGAAAGTCATTCCATTAGAAAATTGGAGAAAAGGGATTAGTTTTAAAGTTTTAAGTAAGAAGCGTCTCTCTGTTTTTTTTTGGAGAGCAGAGAAAAGAAACAGAGAAATGGCGGATTCGTTGGACGAAGAGTGCGATTATCTGTTCAAGGCGGTTCTGACGGGCGATTCCGGCGTCGGAAAATCCAATCTCCTCTCTCGTTTTGCCAAAAACGAATTCCGATTCGACTCTAAACCGACGATCGGCGTCGAGTTTGCTTACCGGAATATTAAGGTCGCCGATAAGCTCATCAAAACCCAAATCTGGGACACCGCCGGCCAAGAAAGATTTAGGGCAATTACAAGTTCTTATTATCGAGGAGCATTGGGAGCGTTGCTTGTGTACGACATAACTCGGGTGGCTACATTTGATAACGTGAAGAAGTGGTTGCGAGAGTTGAGAGAGTTGGGAAATTCGGAGATGGTGATCATTCTGGTTGGAAACAAATGTGATTTGGATGAATCTCGAGAAGTGGAAGAGGAAGAAGCACGTGGTTTGGCAGAGTTAGAAGGCTTATTTTTCATGGAGACTTCTGCTAAGGATAATGTGAATGTAGAAGAGGCATTTCTTGGAATGGTTCGTAGGATCCATGCTATTGCATCCCAAAACACCTTGAATTTGCATAAACATATTGAAAAGCTTGTTGCTTTTCCAAATGGGAAAGAGATTGTTAGTATTCATGAAGTAACTCCAACTAAATCCAATTCATATTGTTGCTCTTTATGAAAATTTAGTTCCAAGTACCTTATAAATATTCTATTTTATAATTTATAAACATTGCGTGAAAGTCATTTTTGTTCTTTTCGTACCAAAATTAGATGATGCAAGTGTGCGATGAGTGTAGTAGCTTCCTCGAAGATACTTGTGACTCGATTGGTAAAATAGTATATTTC

Coding sequence (CDS)

ATGGCGGATTCGTTGGACGAAGAGTGCGATTATCTGTTCAAGGCGGTTCTGACGGGCGATTCCGGCGTCGGAAAATCCAATCTCCTCTCTCGTTTTGCCAAAAACGAATTCCGATTCGACTCTAAACCGACGATCGGCGTCGAGTTTGCTTACCGGAATATTAAGGTCGCCGATAAGCTCATCAAAACCCAAATCTGGGACACCGCCGGCCAAGAAAGATTTAGGGCAATTACAAGTTCTTATTATCGAGGAGCATTGGGAGCGTTGCTTGTGTACGACATAACTCGGGTGGCTACATTTGATAACGTGAAGAAGTGGTTGCGAGAGTTGAGAGAGTTGGGAAATTCGGAGATGGTGATCATTCTGGTTGGAAACAAATGTGATTTGGATGAATCTCGAGAAGTGGAAGAGGAAGAAGCACGTGGTTTGGCAGAGTTAGAAGGCTTATTTTTCATGGAGACTTCTGCTAAGGATAATGTGAATGTAGAAGAGGCATTTCTTGGAATGGTTCGTAGGATCCATGCTATTGCATCCCAAAACACCTTGAATTTGCATAAACATATTGAAAAGCTTGTTGCTTTTCCAAATGGGAAAGAGATTGTTAGTATTCATGAAGTAACTCCAACTAAATCCAATTCATATTGTTGCTCTTTATGA

Protein sequence

MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKLIKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNVKKWLRELRELGNSEMVIILVGNKCDLDESREVEEEEARGLAELEGLFFMETSAKDNVNVEEAFLGMVRRIHAIASQNTLNLHKHIEKLVAFPNGKEIVSIHEVTPTKSNSYCCSL

Homology

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BLAST of Clc06G15510 vs. NCBI nr
Match: XP_004137339.1 (ras-related protein RABA6a [Cucumis sativus] >KGN63869.1 hypothetical protein Csa_013176 [Cucumis sativus])

HSP 1 Score: 398.7 bits (1023), Expect = 3.3e-107
Identity = 197/218 (90.37%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKL 60
           MADSLDE+CDYLFKAVLTGDSGVGKSNLLSRF+KNEFRFDS+PTIGVEFAYRNIKVADKL
Sbjct: 1   MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNVKKWLRELRELGNSEMVI 120
           +KTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDN+KKWLRELRE GN EMVI
Sbjct: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120

Query: 121 ILVGNKCDLDESREVEEEEARGLAELEGLFFMETSAKDNVNVEEAFLGMVRRIHAIASQN 180
           ILVGNKCDL +SREV+EEEAR LAELE LFFMETSAKDN+NVEEAFL MVRRIHAIASQ 
Sbjct: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180

Query: 181 TLNLHKHIEKLVAFPNGKEIVSIHEVTPTKSNSYCCSL 219
           TL+LHK  EKLVAFPNGKEI+SIHEVTPTK NS CCSL
Sbjct: 181 TLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCCSL 218

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BLAST of Clc06G15510 vs. NCBI nr
Match: XP_038880228.1 (LOW QUALITY PROTEIN: ras-related protein RABA6a-like [Benincasa hispida])

HSP 1 Score: 398.3 bits (1022), Expect = 4.3e-107
Identity = 198/217 (91.24%), Postives = 205/217 (94.47%), Query Frame = 0


Query: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKL 60
           M D LDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIK+ADKL
Sbjct: 1   MGDLLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKLADKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNVKKWLRELRELGNSEMVI 120
           IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNVKKWL ELRELGNS+MVI
Sbjct: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNVKKWLGELRELGNSDMVI 120

Query: 121 ILVGNKCDLDESREVEEEEARGLAELEGLFFMETSAKDNVNVEEAFLGMVRRIHAIASQN 180
           ILVGNKCDLD+ REVEEEEARGLAELE LFFMETSAKDNVNVEEAFL MVRRIH IASQ 
Sbjct: 121 ILVGNKCDLDQYREVEEEEARGLAELEDLFFMETSAKDNVNVEEAFLEMVRRIHGIASQK 180

Query: 181 TLNLHKHIEKLVAFPNGKEIVSIHEVTPTKSNSYCCS 218
           TL+ H + EKL+AFPNGKEI+SIHEVTPTK NSYCCS
Sbjct: 181 TLDFHTNFEKLLAFPNGKEILSIHEVTPTKPNSYCCS 217

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BLAST of Clc06G15510 vs. NCBI nr
Match: XP_008453474.1 (PREDICTED: ras-related protein RABA6a-like [Cucumis melo])

HSP 1 Score: 393.3 bits (1009), Expect = 1.4e-105
Identity = 195/217 (89.86%), Postives = 205/217 (94.47%), Query Frame = 0


Query: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKL 60
           MADSLDEECDYLFKAVLTGDSGVGKSNLLSRF+KNEFRFDS+PTIGVEFAYRNIKVADKL
Sbjct: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNVKKWLRELRELGNSEMVI 120
           +KTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDN+KKWLRELRE GN +MVI
Sbjct: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPDMVI 120

Query: 121 ILVGNKCDLDESREVEEEEARGLAELEGLFFMETSAKDNVNVEEAFLGMVRRIHAIASQN 180
           ILVGNKCDL +SREV+EEEAR LAELE L FMETSAKDN+NVEEAFL MVRRIHAIASQ 
Sbjct: 121 ILVGNKCDLHQSREVQEEEARHLAELENLLFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180

Query: 181 TLNLHKHIEKLVAFPNGKEIVSIHEVTPTKSNSYCCS 218
           TL+LHK I KLV FPNGKEI+SIHEVTPTKSNS CCS
Sbjct: 181 TLDLHKKIVKLVDFPNGKEIISIHEVTPTKSNSNCCS 217

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BLAST of Clc06G15510 vs. NCBI nr
Match: XP_023003771.1 (ras-related protein RABA6a-like [Cucurbita maxima])

HSP 1 Score: 381.7 bits (979), Expect = 4.2e-102
Identity = 192/218 (88.07%), Postives = 199/218 (91.28%), Query Frame = 0


Query: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKL 60
           MADS DEECDYLFKAVLTGDSGVGKSNLLSRFA+ EFR DSKPTIGVEFAYRNIKVADKL
Sbjct: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNVKKWLRELRELGNSEMVI 120
           IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITR ATF+NVKKWLRELR+ GNS+MVI
Sbjct: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAATFENVKKWLRELRDFGNSDMVI 120

Query: 121 ILVGNKCDLDESREVEEEEARGLAELEGLFFMETSAKDNVNVEEAFLGMVRRIHAIASQN 180
           +LVGNK DL+ SREVEEEE R LAE E LFFMETSA DNVNVEEAFL MVRRIHAIASQ 
Sbjct: 121 VLVGNKSDLNHSREVEEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180

Query: 181 TLNLHKHIEKLVAFPNGKEIVSIHEVTPTKSNSYCCSL 219
           +LNL K IEK VAFPNG EIVSIHEVTPTK NSYCCSL
Sbjct: 181 SLNLPKRIEKFVAFPNGNEIVSIHEVTPTKPNSYCCSL 218

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BLAST of Clc06G15510 vs. NCBI nr
Match: XP_023529393.1 (ras-related protein RABA6b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 380.9 bits (977), Expect = 7.1e-102
Identity = 192/218 (88.07%), Postives = 198/218 (90.83%), Query Frame = 0


Query: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKL 60
           MADS DEECDYLFKAVLTGDSGVGKSNLLSRFA+ EFR DSKPTIGVEFAYRNIKVADKL
Sbjct: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNVKKWLRELRELGNSEMVI 120
           IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITR  TF+NVKKWLRELR+ GNS+MVI
Sbjct: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120

Query: 121 ILVGNKCDLDESREVEEEEARGLAELEGLFFMETSAKDNVNVEEAFLGMVRRIHAIASQN 180
           +LVGNK DL  SREVEEEE R LAE E LFFMETSA DNVNVEEAFL MVRRIHAIASQ 
Sbjct: 121 VLVGNKSDLSHSREVEEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180

Query: 181 TLNLHKHIEKLVAFPNGKEIVSIHEVTPTKSNSYCCSL 219
           +LNL K IEKLVAFPNGKEIVSIHEVTPTK NSYCC L
Sbjct: 181 SLNLPKRIEKLVAFPNGKEIVSIHEVTPTKPNSYCCYL 218

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BLAST of Clc06G15510 vs. ExPASy Swiss-Prot
Match: Q9C9U7 (Ras-related protein RABA6a OS=Arabidopsis thaliana OX=3702 GN=RABA6A PE=2 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.0e-79
Identity = 153/228 (67.11%), Postives = 178/228 (78.07%), Query Frame = 0


Query: 3   DSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKLIK 62
           D+ +EECDYLFKAVL GDS VGKSNLLSRF+K+EFRFDSKPTIGVEFAYRN+ V DK+IK
Sbjct: 4   DTYEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIK 63

Query: 63  TQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNVKKWLRELRELGNSEMVIIL 122
            QIWDTAGQERFRAITSSYYRGALGALL+YDITR  TFDN+KKWL ELR+  N E V++L
Sbjct: 64  AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVL 123

Query: 123 VGNKCDLDESREVEEEEARGLAELEGLFFMETSAKDNVNVEEAFLGMVRRIHAIASQNTL 182
           VGNK DL +SREVEE+E + LAE EGL+F+ETSA +NVNVEEAFL M+ RIH + +Q   
Sbjct: 124 VGNKSDLRQSREVEEDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQRIA 183

Query: 183 NLHK-------HIE---KLVAFPNGKEIVSIHEVTPTK----SNSYCC 217
           + +K       HI         P GKEIV+IHEVT T+    S+S CC
Sbjct: 184 SENKSNGAATPHINGNGNGTVLPVGKEIVNIHEVTATQPLLSSSSNCC 231

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BLAST of Clc06G15510 vs. ExPASy Swiss-Prot
Match: Q0WQN4 (Ras-related protein RABA6b OS=Arabidopsis thaliana OX=3702 GN=RABA6B PE=2 SV=2)

HSP 1 Score: 287.0 bits (733), Expect = 1.8e-76
Identity = 150/224 (66.96%), Postives = 174/224 (77.68%), Query Frame = 0


Query: 3   DSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKLIK 62
           +S DEECDYLFKAVL GDS VGKSNLLSRF+++EFR DSKPTIGV+FAYRN++V DK IK
Sbjct: 4   ESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIK 63

Query: 63  TQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNVKKWLRELRELGNSEMVIIL 122
            QIWDTAGQERFRAITSSYYRGALGALL+YDITR  TF N++KWL ELR   + E V++L
Sbjct: 64  AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVL 123

Query: 123 VGNKCDLDESREVEEEEARGLAELEGLFFMETSAKDNVNVEEAFLGMVRRIHAIASQ--- 182
           VGNK DL +SREVEEEE + LAE EGL+F+ETSA +N NVEEAFL M+ RIH + +Q   
Sbjct: 124 VGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIV 183

Query: 183 --NTLNLHKHIEKLVA-FPNGKEIVSIHEVTPTK----SNSYCC 217
             N LN   + E   A  P GKEIV+IHEVT T+    S S CC
Sbjct: 184 LDNRLNGDGNNESNGAVVPPGKEIVNIHEVTATRPLSTSLSNCC 227

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BLAST of Clc06G15510 vs. ExPASy Swiss-Prot
Match: O49513 (Ras-related protein RABA1e OS=Arabidopsis thaliana OX=3702 GN=RABA1E PE=2 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.7e-59
Identity = 121/214 (56.54%), Postives = 158/214 (73.83%), Query Frame = 0


Query: 6   DEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKLIKTQI 65
           D++ DYLFK VL GDSGVGKSNLLSRF +NEF  +SK TIGVEFA R++ V +K+IK Q+
Sbjct: 7   DDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQL 66

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNVKKWLRELRELGNSEMVIILVGN 125
           WDTAGQER+RAITS+YYRGA+GALLVYDITR  TF+NV++WL+ELR+  ++ +VI+LVGN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGN 126

Query: 126 KCDLDESREVEEEEARGLAELEGLFFMETSAKDNVNVEEAFLGMVRRIHAIASQNTLNLH 185
           K DL   R V  EEAR  +E E +FFMETSA D  NVE+AF  ++ +I+ + S+  L+  
Sbjct: 127 KADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKALD-- 186

Query: 186 KHIEKLVAFPNGK--EIVSIHEVTPTKSNSYCCS 218
                 ++ P G+  +I +  +VT  KS S CCS
Sbjct: 187 -GTGDPMSLPKGQTIDIGNKDDVTAVKS-SGCCS 216

[Close]

BLAST of Clc06G15510 vs. ExPASy Swiss-Prot
Match: P28185 (Ras-related protein RABA1a OS=Arabidopsis thaliana OX=3702 GN=RABA1A PE=1 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 3.5e-59
Identity = 118/212 (55.66%), Postives = 147/212 (69.34%), Query Frame = 0


Query: 6   DEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKLIKTQI 65
           DEE DYLFK VL GDSGVGKSNLLSRF KNEF  +SK TIGVEFA +  KV  K++K QI
Sbjct: 7   DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQI 66

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNVKKWLRELRELGNSEMVIILVGN 125
           WDTAGQER+RAITS+YYRGA+GALL+YD+TR ATF+N  +WLRELR   +  +V++L+GN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGN 126

Query: 126 KCDLDESREVEEEEARGLAELEGLFFMETSAKDNVNVEEAFLGMVRRIHAIASQNTLNLH 185
           KCDL     V+ EEA+  AE E L+FMETSA D  NVE AF  ++ +IH I S+ +++  
Sbjct: 127 KCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGG 186

Query: 186 KHIEKLVAFPNGKEIVSIHEVTPTKSNSYCCS 218
                L   P   E +++ E         CCS
Sbjct: 187 GESADL---PGKGETINVKEDGSVLKRMGCCS 215

[Close]

BLAST of Clc06G15510 vs. ExPASy Swiss-Prot
Match: Q40723 (Ras-related protein RGP2 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP2 PE=2 SV=2)

HSP 1 Score: 229.6 bits (584), Expect = 3.5e-59
Identity = 116/217 (53.46%), Postives = 150/217 (69.12%), Query Frame = 0


Query: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKL 60
           M   +D E  YLFK VL GDSGVGKSN+LSRF +N F  DSK TIGVEFA +++++  K 
Sbjct: 1   MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKT 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNVKKWLRELRELGNSEMVI 120
           IK QIWDTAGQER+RAITS+YYRGA+GALLVYDIT+  +FDNV +WLRELR+  +S +VI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVI 120

Query: 121 ILVGNKCDLDESREVEEEEARGLAELEGLFFMETSAKDNVNVEEAFLGMVRRIHAIASQN 180
           ++VGNK DL   R V E+E + LAE EGLFF+ETSA + VNVEEAF  ++  ++ I ++ 
Sbjct: 121 MMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRK 180

Query: 181 TLNLHKHIEKLVAFPNGKEIVSIHEVTPTKSNSYCCS 218
            L   +        P+  + +SI         + CCS
Sbjct: 181 ALAAKEAAAASAPLPSQGKTISIDSAAGNTKRA-CCS 216

[Close]

BLAST of Clc06G15510 vs. ExPASy TrEMBL
Match: A0A0A0LS89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025010 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.6e-107
Identity = 197/218 (90.37%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKL 60
           MADSLDE+CDYLFKAVLTGDSGVGKSNLLSRF+KNEFRFDS+PTIGVEFAYRNIKVADKL
Sbjct: 1   MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNVKKWLRELRELGNSEMVI 120
           +KTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDN+KKWLRELRE GN EMVI
Sbjct: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120

Query: 121 ILVGNKCDLDESREVEEEEARGLAELEGLFFMETSAKDNVNVEEAFLGMVRRIHAIASQN 180
           ILVGNKCDL +SREV+EEEAR LAELE LFFMETSAKDN+NVEEAFL MVRRIHAIASQ 
Sbjct: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180

Query: 181 TLNLHKHIEKLVAFPNGKEIVSIHEVTPTKSNSYCCSL 219
           TL+LHK  EKLVAFPNGKEI+SIHEVTPTK NS CCSL
Sbjct: 181 TLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCCSL 218

[Close]

BLAST of Clc06G15510 vs. ExPASy TrEMBL
Match: A0A1S3BWB9 (ras-related protein RABA6a-like OS=Cucumis melo OX=3656 GN=LOC103494177 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 6.7e-106
Identity = 195/217 (89.86%), Postives = 205/217 (94.47%), Query Frame = 0


Query: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKL 60
           MADSLDEECDYLFKAVLTGDSGVGKSNLLSRF+KNEFRFDS+PTIGVEFAYRNIKVADKL
Sbjct: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNVKKWLRELRELGNSEMVI 120
           +KTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDN+KKWLRELRE GN +MVI
Sbjct: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPDMVI 120

Query: 121 ILVGNKCDLDESREVEEEEARGLAELEGLFFMETSAKDNVNVEEAFLGMVRRIHAIASQN 180
           ILVGNKCDL +SREV+EEEAR LAELE L FMETSAKDN+NVEEAFL MVRRIHAIASQ 
Sbjct: 121 ILVGNKCDLHQSREVQEEEARHLAELENLLFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180

Query: 181 TLNLHKHIEKLVAFPNGKEIVSIHEVTPTKSNSYCCS 218
           TL+LHK I KLV FPNGKEI+SIHEVTPTKSNS CCS
Sbjct: 181 TLDLHKKIVKLVDFPNGKEIISIHEVTPTKSNSNCCS 217

[Close]

BLAST of Clc06G15510 vs. ExPASy TrEMBL
Match: A0A6J1KQ67 (ras-related protein RABA6a-like OS=Cucurbita maxima OX=3661 GN=LOC111497252 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 2.0e-102
Identity = 192/218 (88.07%), Postives = 199/218 (91.28%), Query Frame = 0


Query: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKL 60
           MADS DEECDYLFKAVLTGDSGVGKSNLLSRFA+ EFR DSKPTIGVEFAYRNIKVADKL
Sbjct: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNVKKWLRELRELGNSEMVI 120
           IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITR ATF+NVKKWLRELR+ GNS+MVI
Sbjct: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAATFENVKKWLRELRDFGNSDMVI 120

Query: 121 ILVGNKCDLDESREVEEEEARGLAELEGLFFMETSAKDNVNVEEAFLGMVRRIHAIASQN 180
           +LVGNK DL+ SREVEEEE R LAE E LFFMETSA DNVNVEEAFL MVRRIHAIASQ 
Sbjct: 121 VLVGNKSDLNHSREVEEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180

Query: 181 TLNLHKHIEKLVAFPNGKEIVSIHEVTPTKSNSYCCSL 219
           +LNL K IEK VAFPNG EIVSIHEVTPTK NSYCCSL
Sbjct: 181 SLNLPKRIEKFVAFPNGNEIVSIHEVTPTKPNSYCCSL 218

[Close]

BLAST of Clc06G15510 vs. ExPASy TrEMBL
Match: A0A6J1BZG6 (ras-related protein RABA6b OS=Momordica charantia OX=3673 GN=LOC111006897 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 9.4e-100
Identity = 186/218 (85.32%), Postives = 196/218 (89.91%), Query Frame = 0


Query: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKL 60
           MADS DEECDYLFKAVLTGDSGVGKSNLLSRFAK+EFR DSKPTIGVEFAYRNIKVA KL
Sbjct: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFAKSEFRLDSKPTIGVEFAYRNIKVAGKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNVKKWLRELRELGNSEMVI 120
           IK QIWDTAGQERFRAITSSYYRGALGALLVYD+TRVATF+NVKKWLRELRE GNS+MVI
Sbjct: 61  IKAQIWDTAGQERFRAITSSYYRGALGALLVYDVTRVATFENVKKWLRELREFGNSDMVI 120

Query: 121 ILVGNKCDLDESREVEEEEARGLAELEGLFFMETSAKDNVNVEEAFLGMVRRIHAIASQN 180
           ILVGNKCDL  SREV+EEE R LAE E LFFMETSA  NVNVEE FL MVRRIH IASQ 
Sbjct: 121 ILVGNKCDLGHSREVQEEEGRLLAESESLFFMETSAMKNVNVEEVFLQMVRRIHEIASQK 180

Query: 181 TLNLHKHIEKLVAFPNGKEIVSIHEVTPTKSNSYCCSL 219
            L+L K IEKL AFPNGKEI+SIH+VTPTK +SYCCS+
Sbjct: 181 ALDLPKQIEKLAAFPNGKEIISIHDVTPTKPDSYCCSI 218

[Close]

BLAST of Clc06G15510 vs. ExPASy TrEMBL
Match: A0A6J1F0C2 (ras-related protein RABA6b-like OS=Cucurbita moschata OX=3662 GN=LOC111441184 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 3.6e-99
Identity = 189/218 (86.70%), Postives = 195/218 (89.45%), Query Frame = 0


Query: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKL 60
           MADS DEECDYLFKAVLTGDSGVGKSNLLSRFA+ EFR DSKPTIGVEFAYRNIKVADKL
Sbjct: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNVKKWLRELRELGNSEMVI 120
           IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITR  TF+NVKKWLRELR+ GNS+MVI
Sbjct: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120

Query: 121 ILVGNKCDLDESREVEEEEARGLAELEGLFFMETSAKDNVNVEEAFLGMVRRIHAIASQN 180
           +LVGNK DL  SREV EEE R LAE E LFFMETSA DNVNVEEAFL MVRRIHAIASQ 
Sbjct: 121 VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180

Query: 181 TLNLHKHIEKLVAFPNGKEIVSIHEVTPTKSNSYCCSL 219
           +LNL K IEKLVAFPNGKEIV  HEVTPTK NSYCC L
Sbjct: 181 SLNLPKRIEKLVAFPNGKEIV--HEVTPTKPNSYCCYL 216

[Close]

BLAST of Clc06G15510 vs. TAIR 10
Match: AT1G73640.1 (RAB GTPase homolog A6A )

HSP 1 Score: 297.7 bits (761), Expect = 7.4e-81
Identity = 153/228 (67.11%), Postives = 178/228 (78.07%), Query Frame = 0


Query: 3   DSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKLIK 62
           D+ +EECDYLFKAVL GDS VGKSNLLSRF+K+EFRFDSKPTIGVEFAYRN+ V DK+IK
Sbjct: 4   DTYEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIK 63

Query: 63  TQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNVKKWLRELRELGNSEMVIIL 122
            QIWDTAGQERFRAITSSYYRGALGALL+YDITR  TFDN+KKWL ELR+  N E V++L
Sbjct: 64  AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVL 123

Query: 123 VGNKCDLDESREVEEEEARGLAELEGLFFMETSAKDNVNVEEAFLGMVRRIHAIASQNTL 182
           VGNK DL +SREVEE+E + LAE EGL+F+ETSA +NVNVEEAFL M+ RIH + +Q   
Sbjct: 124 VGNKSDLRQSREVEEDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQRIA 183

Query: 183 NLHK-------HIE---KLVAFPNGKEIVSIHEVTPTK----SNSYCC 217
           + +K       HI         P GKEIV+IHEVT T+    S+S CC
Sbjct: 184 SENKSNGAATPHINGNGNGTVLPVGKEIVNIHEVTATQPLLSSSSNCC 231

[Close]

BLAST of Clc06G15510 vs. TAIR 10
Match: AT1G18200.1 (RAB GTPase homolog A6B )

HSP 1 Score: 287.0 bits (733), Expect = 1.3e-77
Identity = 150/224 (66.96%), Postives = 174/224 (77.68%), Query Frame = 0


Query: 3   DSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKLIK 62
           +S DEECDYLFKAVL GDS VGKSNLLSRF+++EFR DSKPTIGV+FAYRN++V DK IK
Sbjct: 4   ESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIK 63

Query: 63  TQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNVKKWLRELRELGNSEMVIIL 122
            QIWDTAGQERFRAITSSYYRGALGALL+YDITR  TF N++KWL ELR   + E V++L
Sbjct: 64  AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVL 123

Query: 123 VGNKCDLDESREVEEEEARGLAELEGLFFMETSAKDNVNVEEAFLGMVRRIHAIASQ--- 182
           VGNK DL +SREVEEEE + LAE EGL+F+ETSA +N NVEEAFL M+ RIH + +Q   
Sbjct: 124 VGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIV 183

Query: 183 --NTLNLHKHIEKLVA-FPNGKEIVSIHEVTPTK----SNSYCC 217
             N LN   + E   A  P GKEIV+IHEVT T+    S S CC
Sbjct: 184 LDNRLNGDGNNESNGAVVPPGKEIVNIHEVTATRPLSTSLSNCC 227

[Close]

BLAST of Clc06G15510 vs. TAIR 10
Match: AT4G18430.1 (RAB GTPase homolog A1E )

HSP 1 Score: 229.9 bits (585), Expect = 1.9e-60
Identity = 121/214 (56.54%), Postives = 158/214 (73.83%), Query Frame = 0


Query: 6   DEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKLIKTQI 65
           D++ DYLFK VL GDSGVGKSNLLSRF +NEF  +SK TIGVEFA R++ V +K+IK Q+
Sbjct: 7   DDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQL 66

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNVKKWLRELRELGNSEMVIILVGN 125
           WDTAGQER+RAITS+YYRGA+GALLVYDITR  TF+NV++WL+ELR+  ++ +VI+LVGN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGN 126

Query: 126 KCDLDESREVEEEEARGLAELEGLFFMETSAKDNVNVEEAFLGMVRRIHAIASQNTLNLH 185
           K DL   R V  EEAR  +E E +FFMETSA D  NVE+AF  ++ +I+ + S+  L+  
Sbjct: 127 KADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKALD-- 186

Query: 186 KHIEKLVAFPNGK--EIVSIHEVTPTKSNSYCCS 218
                 ++ P G+  +I +  +VT  KS S CCS
Sbjct: 187 -GTGDPMSLPKGQTIDIGNKDDVTAVKS-SGCCS 216

[Close]

BLAST of Clc06G15510 vs. TAIR 10
Match: AT1G06400.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 229.6 bits (584), Expect = 2.5e-60
Identity = 118/212 (55.66%), Postives = 147/212 (69.34%), Query Frame = 0


Query: 6   DEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKLIKTQI 65
           DEE DYLFK VL GDSGVGKSNLLSRF KNEF  +SK TIGVEFA +  KV  K++K QI
Sbjct: 7   DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQI 66

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNVKKWLRELRELGNSEMVIILVGN 125
           WDTAGQER+RAITS+YYRGA+GALL+YD+TR ATF+N  +WLRELR   +  +V++L+GN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGN 126

Query: 126 KCDLDESREVEEEEARGLAELEGLFFMETSAKDNVNVEEAFLGMVRRIHAIASQNTLNLH 185
           KCDL     V+ EEA+  AE E L+FMETSA D  NVE AF  ++ +IH I S+ +++  
Sbjct: 127 KCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGG 186

Query: 186 KHIEKLVAFPNGKEIVSIHEVTPTKSNSYCCS 218
                L   P   E +++ E         CCS
Sbjct: 187 GESADL---PGKGETINVKEDGSVLKRMGCCS 215

[Close]

BLAST of Clc06G15510 vs. TAIR 10
Match: AT2G33870.1 (RAB GTPase homolog A1H )

HSP 1 Score: 229.2 bits (583), Expect = 3.2e-60
Identity = 115/213 (53.99%), Postives = 153/213 (71.83%), Query Frame = 0


Query: 6   DEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKLIKTQI 65
           +++ DYLFK VLTGDSGVGKSNLLSRF +N+F  DS+ TIGVEFA R+I+V DK++K QI
Sbjct: 7   EDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQI 66

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNVKKWLRELRELGNSEMVIILVGN 125
           WDTAGQER+RAITS+YYRGA+GALLVYD+TR  TF+NV++WL+ELR+  ++  VI+LVGN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGN 126

Query: 126 KCDLDESREVEEEEARGLAELEGLFFMETSAKDNVNVEEAFLGMVRRIHAIASQNTLNLH 185
           K DL+  R +  EE +  AE E  FFMETSA + +NVE AF  ++ +I+ + S+  L+  
Sbjct: 127 KADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDAG 186

Query: 186 KHIEKLVAFPNGKEI-VSIHEVTPTKSNSYCCS 218
              +   A P G+ I V   +       S CC+
Sbjct: 187 D--DPTTALPKGQMINVGSRDDVSAVKKSGCCA 217

The following BLAST results are available for this feature:

BLAST of Clc06G15510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137339.1	3.3e-107	90.37	ras-related protein RABA6a [Cucumis sativus] >KGN63869.1 hypothetical protein Cs...	[more]
XP_038880228.1	4.3e-107	91.24	LOW QUALITY PROTEIN: ras-related protein RABA6a-like [Benincasa hispida]	[more]
XP_008453474.1	1.4e-105	89.86	PREDICTED: ras-related protein RABA6a-like [Cucumis melo]	[more]
XP_023003771.1	4.2e-102	88.07	ras-related protein RABA6a-like [Cucurbita maxima]	[more]
XP_023529393.1	7.1e-102	88.07	ras-related protein RABA6b-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc06G15510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9U7	1.0e-79	67.11	Ras-related protein RABA6a OS=Arabidopsis thaliana OX=3702 GN=RABA6A PE=2 SV=1	[more]
Q0WQN4	1.8e-76	66.96	Ras-related protein RABA6b OS=Arabidopsis thaliana OX=3702 GN=RABA6B PE=2 SV=2	[more]
O49513	2.7e-59	56.54	Ras-related protein RABA1e OS=Arabidopsis thaliana OX=3702 GN=RABA1E PE=2 SV=1	[more]
P28185	3.5e-59	55.66	Ras-related protein RABA1a OS=Arabidopsis thaliana OX=3702 GN=RABA1A PE=1 SV=1	[more]
Q40723	3.5e-59	53.46	Ras-related protein RGP2 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP2 PE=2 S...	[more]

BLAST of Clc06G15510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LS89	1.6e-107	90.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025010 PE=4 SV=1	[more]
A0A1S3BWB9	6.7e-106	89.86	ras-related protein RABA6a-like OS=Cucumis melo OX=3656 GN=LOC103494177 PE=4 SV=...	[more]
A0A6J1KQ67	2.0e-102	88.07	ras-related protein RABA6a-like OS=Cucurbita maxima OX=3661 GN=LOC111497252 PE=4...	[more]
A0A6J1BZG6	9.4e-100	85.32	ras-related protein RABA6b OS=Momordica charantia OX=3673 GN=LOC111006897 PE=4 S...	[more]
A0A6J1F0C2	3.6e-99	86.70	ras-related protein RABA6b-like OS=Cucurbita moschata OX=3662 GN=LOC111441184 PE...	[more]

BLAST of Clc06G15510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73640.1	7.4e-81	67.11	RAB GTPase homolog A6A	[more]
AT1G18200.1	1.3e-77	66.96	RAB GTPase homolog A6B	[more]
AT4G18430.1	1.9e-60	56.54	RAB GTPase homolog A1E	[more]
AT1G06400.1	2.5e-60	55.66	Ras-related small GTP-binding family protein	[more]
AT2G33870.1	3.2e-60	53.99	RAB GTPase homolog A1H	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 13..34 score: 52.08 coord: 116..129 score: 52.84 coord: 151..173 score: 46.05 coord: 36..52 score: 34.81 coord: 54..76 score: 50.33
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 13..176 e-value: 1.2E-100 score: 350.3
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 10..176 e-value: 9.4E-29 score: 111.5
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 18..214 e-value: 1.4E-8 score: 44.5
None	No IPR available	PANTHER	PTHR47979:SF52	RAS-RELATED PROTEIN RABA6B	coord: 3..217
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 3..217
None	No IPR available	PROSITE	PS51419	RAB	coord: 8..216 score: 34.065189
None	No IPR available	PROSITE	PS51420	RHO	coord: 6..175 score: 9.160597
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 15..176 e-value: 1.9E-10 score: 14.7
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 14..174 e-value: 1.0E-58 score: 197.5
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 7..218 score: 17.193394
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 5..216 e-value: 2.4E-67 score: 228.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..185
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..166 e-value: 2.9E-33 score: 112.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G15510.1	Clc06G15510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0012505	endomembrane system
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding