Clc06G15440 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAATTTTTTATTTTGGTATATATAAATAGGAGGCAGCAGAGGACGATGCCGGATACACCAACATCGCCGAAGAGCGGTGGCCGTCTGGTGCTAATGGAGAATCTGCTCGGACTTCTCCGTATTCGCATCATTCGTGGTGTTAATCTTGCTGTTCGTGATGTTCGCAGTAGTGATCCTTATGTTGTCATCAAGATGGGAAAGCAAGTACGTTTTTCTCTTATTTTTCTTTCATGATCATTGATTACCACCTTTTTTTTTTTTTTTTTTCCTTCGAATTTGAGGTTTTGTTTCTTTAAGTTGTTTGTGATGCTGCAAGATCCTTGAAACCTGTTGATTTACTTCGTCGTAATTGATTGATTTGTTTGGGATAAGGGTCGTGAGTTGAGTGGTGTGTTTTCTGAGCAAGGGTTAACCATAGGAGTAATGGTTAGTAATTGGTTGAATTTGAGGCTTAATTGTTCGAAAAATGGCGTGAATGTCTGGATCGTTCTACACATATGGAGATTTTGGAGGTGCAGAAATGAATCTTGTGTGTGGGTGGGAGCTGAGCTGATTTTTAATGCGAGTTTTTATCCGAGGAATGAGATGGATTAAATTCCTGTTAGTTGAATTGTTAACGCATAAGTTTTGTTACTATCAAATGAACATCACGAGAAATTGTGCCTTTTAAGGTAGCTCAATCAATTACTTTGAAGATGTTAATGATCCATTTAACTATGGCGTTACAAAAATGAGAAAGTAGAATATATTAATATTAGATGTGAAATATTGGTTGCCGTCATTATATTTACGTCTTTGTTTTTGTTTCTTACAAGGAAAAGAGAATGATAGAGCGAGAGAATTAATTTTCATGCATTGCTGCTGCTTAATACTTTTGTTGTTGTGAACTCTGGATTTAGAAACTGAAGACAAGGGTGATAAAGAAGGATGTTAATCCTGTATGGAATGAAGATCTAACTCTTTCTATCAGTGATCCGAATCTTCCAATTAAGCTGGTAATCCTTCTCTATTTATTATATAATCTATATGTTTTATTTATCATACAAATAAAATAGAAAAAGTTGGTTCAATTGTATGGCAGTGCCATATTTTACGAGTTTTTTCTTTCTTGGCCTTGTCTCCTTCAAATACGTTAACCATGAGAGAAATTTATTCAGCTTTTTAGTTTTTTTATACTATTGAATTCCCTTTTGAAATGATGATCCATGAAAGGCACCATTAAAATGATATATATTTGGTATGTTGCTCTGCCATCTATCTGGAATGCTTTTTAAACAATTTCCATATAGATATACTCACAGAGTTACAATGATGATATGCTTCTATTGTGACCAATTTATAGCAATTGCTATTGCTAAGCCAGGTTAAGCTTGTTTGCCCTGTGAATCAGTGCATTTTTTTCCAGGAAAGTTATAAGTGATCATTTTTTAGTCTCTGATGTCATCTTCCATGGACGCCATACTTTGGTAGCTTTCTATCATATTCTGTCATGATTCCTTTTATATTGACAAGGGAACCACCGGAACATTATCTCTCACGGTGTTAAATACTAGTTTGGACTTTGAAAATCAGAGTTTGTGTAAGGAGATTTGGCTCTTCAAACGATAATTTGCTTCATATGGTCTCTTTTCTATCTGCTGTTTAAACTTTGTGTACAGTCTTTGACCGTTTGAAGAGAAGATCATTTCCGAAACGAGTTATCTTCATAGTATATCTGTGGCACATAATCATAGTATGGAAGAACGCTCAACTTTTTTCTGGTACTCTTCACGTTATTGAATAAGAGGAACTGTTAATCGAGGATTCTAAAGAAAGAGAAAAAGGGTGTGGACTTTTATTGCATTACGGGTTTACCTCTTTATCTCGCTTAGTTTGACATTTCTAGTACTTCAACCTTGATAAGAGCTATTTTAATGAGTCACTTGTCTTGGTGCCATAACAAAAATCAACTTCCACGACTTTCTTTACCGGTACCATGTTTCCTTACATTGATTTTCTTTTCTATTCATCTTTGACCTCGTTACAGACCGTTTACGATCACGACACATTTAGCAAGGATGATAAAATGGGATATGCTGAGTTCGATATCAAAGCATTTATGGAAGCTCTGAAGATGAACTTGAAAAATCTTCCCAGTGGAACTACTATCTCACGAATGCTACCGGCCAGGCAAAACTGTCTCGCTGAAGAGAGCTGTGTCGTCTGGAAAGATGGTAAAGTAGTCCAAGATATCTACCTTAGATTGAAAAATGTCGAATGCGGAGAAGTCGAAATTCAGTTGCAGTGGATTGATCTTCCGAACCCCAAAGGCTGAAAGAAGATTTGGTTTATCAGCATCCCTGCTAGCTAGAGGTTACTGCTCATTCCACTTCCTATCATTTTCCTTTTTCAAAATATTTGTATAGTATTTCTGATGTTCTTATGATTTTACATGTATCCTAGTCAGTCTACATAATACTTGATTGTAGCATGCATGTTATGTAAGAATGATAGACTTGTGCTTTGGCTAAGGTTTTCTCATGGATTTCTTAAATAAGTTGTTTTGATTTTCAATTTTTATTTGCCAATATAAGCTATATGATTTTCATCCAAATTGAATTTGAGTTATGTTGATGATTTCTGGATTGACTTTCTTAAGTGCCTTCAAAACATTTTTTAAGCTACATTTTTTAAGCTGGTTGTTAACTCTAAGTAGTGTTTGGTATTATATAACAAGCAACTATCCTCTTC GAAATTTTTTATTTTGGTATATATAAATAGGAGGCAGCAGAGGACGATGCCGGATACACCAACATCGCCGAAGAGCGGTGGCCGTCTGGTGCTAATGGAGAATCTGCTCGGACTTCTCCGTATTCGCATCATTCGTGGTGTTAATCTTGCTGTTCGTGATGTTCGCAGTAGTGATCCTTATGTTGTCATCAAGATGGGAAAGCAAGGTCGTGAGTTGAGTGGTGTGTTTTCTGAGCAAGGGTTAACCATAGGAGTAATGAAACTGAAGACAAGGGTGATAAAGAAGGATGTTAATCCTGTATGGAATGAAGATCTAACTCTTTCTATCAGTGATCCGAATCTTCCAATTAAGCTGACCGTTTACGATCACGACACATTTAGCAAGGATGATAAAATGGGATATGCTGAGTTCGATATCAAAGCATTTATGGAAGCTCTGAAGATGAACTTGAAAAATCTTCCCAGTGGAACTACTATCTCACGAATGCTACCGGCCAGGCAAAACTGTCTCGCTGAAGAGAGCTGTGTCGTCTGGAAAGATGGTAAAGTAGTCCAAGATATCTACCTTAGATTGAAAAATGTCGAATGCGGAGAAGTCGAAATTCAGTTGCAGTGGATTGATCTTCCGAACCCCAAAGGCTGAAAGAAGATTTGGTTTATCAGCATCCCTGCTAGCTAGAGGTTACTGCTCATTCCACTTCCTATCATTTTCCTTTTTCAAAATATTTGTATAGTATTTCTGATGTTCTTATGATTTTACATGTATCCTAGTCAGTCTACATAATACTTGATTGTAGCATGCATGTTATGTAAGAATGATAGACTTGTGCTTTGGCTAAGGTTTTCTCATGGATTTCTTAAATAAGTTGTTTTGATTTTCAATTTTTATTTGCCAATATAAGCTATATGATTTTCATCCAAATTGAATTTGAGTTATGTTGATGATTTCTGGATTGACTTTCTTAAGTGCCTTCAAAACATTTTTTAAGCTACATTTTTTAAGCTGGTTGTTAACTCTAAGTAGTGTTTGGTATTATATAACAAGCAACTATCCTCTTC ATGCCGGATACACCAACATCGCCGAAGAGCGGTGGCCGTCTGGTGCTAATGGAGAATCTGCTCGGACTTCTCCGTATTCGCATCATTCGTGGTGTTAATCTTGCTGTTCGTGATGTTCGCAGTAGTGATCCTTATGTTGTCATCAAGATGGGAAAGCAAGGTCGTGAGTTGAGTGGTGTGTTTTCTGAGCAAGGGTTAACCATAGGAGTAATGAAACTGAAGACAAGGGTGATAAAGAAGGATGTTAATCCTGTATGGAATGAAGATCTAACTCTTTCTATCAGTGATCCGAATCTTCCAATTAAGCTGACCGTTTACGATCACGACACATTTAGCAAGGATGATAAAATGGGATATGCTGAGTTCGATATCAAAGCATTTATGGAAGCTCTGAAGATGAACTTGAAAAATCTTCCCAGTGGAACTACTATCTCACGAATGCTACCGGCCAGGCAAAACTGTCTCGCTGAAGAGAGCTGTGTCGTCTGGAAAGATGGTAAAGTAGTCCAAGATATCTACCTTAGATTGAAAAATGTCGAATGCGGAGAAGTCGAAATTCAGTTGCAGTGGATTGATCTTCCGAACCCCAAAGGCTGA MPDTPTSPKSGGRLVLMENLLGLLRIRIIRGVNLAVRDVRSSDPYVVIKMGKQGRELSGVFSEQGLTIGVMKLKTRVIKKDVNPVWNEDLTLSISDPNLPIKLTVYDHDTFSKDDKMGYAEFDIKAFMEALKMNLKNLPSGTTISRMLPARQNCLAEESCVVWKDGKVVQDIYLRLKNVECGEVEIQLQWIDLPNPKG Homology
BLAST of Clc06G15440 vs. NCBI nr
Match: KAA0058139.1 (protein C2-DOMAIN ABA-RELATED 4-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 344.4 bits (882), Expect = 6.7e-91 Identity = 172/198 (86.87%), Postives = 178/198 (89.90%), Query Frame = 0
BLAST of Clc06G15440 vs. NCBI nr
Match: XP_008453481.1 (PREDICTED: protein C2-DOMAIN ABA-RELATED 4-like isoform X1 [Cucumis melo]) HSP 1 Score: 342.4 bits (877), Expect = 2.6e-90 Identity = 171/198 (86.36%), Postives = 178/198 (89.90%), Query Frame = 0
BLAST of Clc06G15440 vs. NCBI nr
Match: XP_038880004.1 (protein C2-DOMAIN ABA-RELATED 4-like isoform X1 [Benincasa hispida]) HSP 1 Score: 340.9 bits (873), Expect = 7.4e-90 Identity = 172/198 (86.87%), Postives = 176/198 (88.89%), Query Frame = 0
BLAST of Clc06G15440 vs. NCBI nr
Match: XP_031736298.1 (protein C2-DOMAIN ABA-RELATED 4 isoform X2 [Cucumis sativus] >KAE8652474.1 hypothetical protein Csa_014064 [Cucumis sativus]) HSP 1 Score: 333.2 bits (853), Expect = 1.5e-87 Identity = 167/198 (84.34%), Postives = 176/198 (88.89%), Query Frame = 0
BLAST of Clc06G15440 vs. NCBI nr
Match: XP_023531652.1 (protein C2-DOMAIN ABA-RELATED 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 331.6 bits (849), Expect = 4.5e-87 Identity = 163/198 (82.32%), Postives = 173/198 (87.37%), Query Frame = 0
BLAST of Clc06G15440 vs. ExPASy Swiss-Prot
Match: Q9LVH4 (Protein C2-DOMAIN ABA-RELATED 4 OS=Arabidopsis thaliana OX=3702 GN=CAR4 PE=1 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 3.6e-63 Identity = 122/183 (66.67%), Postives = 142/183 (77.60%), Query Frame = 0
BLAST of Clc06G15440 vs. ExPASy Swiss-Prot
Match: Q9LP65 (Protein C2-DOMAIN ABA-RELATED 5 OS=Arabidopsis thaliana OX=3702 GN=CAR5 PE=2 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 6.8e-62 Identity = 121/179 (67.60%), Postives = 141/179 (78.77%), Query Frame = 0
BLAST of Clc06G15440 vs. ExPASy Swiss-Prot
Match: Q9C6B7 (Protein C2-DOMAIN ABA-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=CAR3 PE=3 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 1.5e-56 Identity = 109/183 (59.56%), Postives = 137/183 (74.86%), Query Frame = 0
BLAST of Clc06G15440 vs. ExPASy Swiss-Prot
Match: Q9FHP6 (Protein C2-DOMAIN ABA-RELATED 1 OS=Arabidopsis thaliana OX=3702 GN=CAR1 PE=1 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 2.6e-53 Identity = 104/185 (56.22%), Postives = 135/185 (72.97%), Query Frame = 0
BLAST of Clc06G15440 vs. ExPASy Swiss-Prot
Match: A2X479 (GTPase activating protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_07012 PE=3 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 1.4e-51 Identity = 96/183 (52.46%), Postives = 133/183 (72.68%), Query Frame = 0
BLAST of Clc06G15440 vs. ExPASy TrEMBL
Match: A0A5A7UX88 (Protein C2-DOMAIN ABA-RELATED 4-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004500 PE=3 SV=1) HSP 1 Score: 344.4 bits (882), Expect = 3.3e-91 Identity = 172/198 (86.87%), Postives = 178/198 (89.90%), Query Frame = 0
BLAST of Clc06G15440 vs. ExPASy TrEMBL
Match: A0A1S3BX57 (protein C2-DOMAIN ABA-RELATED 4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494182 PE=3 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 1.2e-90 Identity = 171/198 (86.36%), Postives = 178/198 (89.90%), Query Frame = 0
BLAST of Clc06G15440 vs. ExPASy TrEMBL
Match: A0A6J1ECI8 (protein C2-DOMAIN ABA-RELATED 4-like OS=Cucurbita moschata OX=3662 GN=LOC111432956 PE=3 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 4.9e-87 Identity = 163/198 (82.32%), Postives = 172/198 (86.87%), Query Frame = 0
BLAST of Clc06G15440 vs. ExPASy TrEMBL
Match: A0A6J1HMC9 (protein C2-DOMAIN ABA-RELATED 4-like OS=Cucurbita maxima OX=3661 GN=LOC111465511 PE=3 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 4.9e-87 Identity = 163/197 (82.74%), Postives = 172/197 (87.31%), Query Frame = 0
BLAST of Clc06G15440 vs. ExPASy TrEMBL
Match: A0A0A0LV32 (C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G025080 PE=3 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 2.9e-84 Identity = 167/218 (76.61%), Postives = 176/218 (80.73%), Query Frame = 0
BLAST of Clc06G15440 vs. TAIR 10
Match: AT3G17980.1 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 242.7 bits (618), Expect = 2.6e-64 Identity = 122/183 (66.67%), Postives = 142/183 (77.60%), Query Frame = 0
BLAST of Clc06G15440 vs. TAIR 10
Match: AT1G48590.1 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 238.4 bits (607), Expect = 4.8e-63 Identity = 121/179 (67.60%), Postives = 141/179 (78.77%), Query Frame = 0
BLAST of Clc06G15440 vs. TAIR 10
Match: AT1G48590.2 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 238.4 bits (607), Expect = 4.8e-63 Identity = 121/179 (67.60%), Postives = 141/179 (78.77%), Query Frame = 0
BLAST of Clc06G15440 vs. TAIR 10
Match: AT1G73580.1 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 220.7 bits (561), Expect = 1.0e-57 Identity = 109/183 (59.56%), Postives = 137/183 (74.86%), Query Frame = 0
BLAST of Clc06G15440 vs. TAIR 10
Match: AT5G37740.2 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 211.1 bits (536), Expect = 8.3e-55 Identity = 106/186 (56.99%), Postives = 138/186 (74.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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