Clc06G15400 (gene) Watermelon (cordophanus) v2

Overview
NameClc06G15400
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Descriptionzinc finger protein VAR3, chloroplastic
LocationClcChr06: 26302182 .. 26306757 (-)
RNA-Seq ExpressionClc06G15400
SyntenyClc06G15400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGCACCCATTTTGAGATCAAACTAGTATTTTAACTAGTAGCTATCAACAAAAAGACCATTTTCCCTTTGTTTTTTAATTGGAACCCGAAAATCGCCACCCGTACAAAAATCCCCCTCTAAAACCCATCTGCGGATATAAAACATCTCTAATGGCTAAACCCTTTTCGTTTCCGTCAAAATCCACCGAACACACGGTCATGGCAGCTCCAAAGTTCTTGCAGTTCGGCACTGCAATCTCCCGAACTACACCCAGAGCTCTATCGCCCCTCCTCTTCCCCAGAAGACTCCCGCCGAAGCTCATATCCTTCATCAGGTGCAGTTCTTCTACCGCGCTTGATGCCGCCGGCAGCAGCGGCGCTGATGCTCCCCAACAACACTCCACCCTCACTCACCACCCATGGCCTGAATGGGTTTCCTTCGTCGATGGCCTGAGGACCAAGGGTTACTTGATCGAACCTCCTTCAGAAGATGCAACTACGCCATCTGGGACTGATTACAGCGACATGAACGTGTTGAAGGATGCTTGCGTCAGCTTTGCGCGCGATCGATACGATATTTTCAAGTGAGTTTCGTGTTTATAGTTGAGTTTTTGAGAACTGTCGACTAGAAATTGGACTTGATATTGACATGGCGACGGTTGCATCTTCTGGGAATGGATGTTTCATACACTTGAAAGTACTCTCTATTCCTCTTAAACATGGATTGAATTGAAAGATTTTCATGGCTCTTATAATTTATGATTCTGGATTATCATACCCATAGACTATCCTTGTTGTTCTTGGGAGGGAACTGTGGTAGTTTCTTTGTTTCACTTGCATTACTTAGCAATTAGCATGGTATTGATTACTGCCATATCTCAGGGCTTGATTAGAATCTGTTACTTTTTCTTCGTGCAGATCATTGTCCACAGATGATATTCAAACGATTGTGAAGGATGGATGCCCCAATCTCTTCCGGAAAGTTGTTAATTCAGCTAAAAGGTTGAGGGCTTATGTGCAACTAGATGAAGGGGACGTATGTATTCTCACTTAAATATCGTAATTATTTTTTCATAAGTTAGGTTTCCTTGTACCATGGGATTGGTTGAGTCAATTTCGTCTAGTTTGAGAGGGAACTGAGTACATTCAAGCATATGTCATAAGGTTTGTTTTTCATTTCAATATATCTACTTTGTACAGGTTTGTAGTACCTGCAACCTTCGAGGCTCCTGTGATAGAGCTTATGTTATTTTAAAGGAAACAGAAGCAACTGCAAGAACTGTGGATGTAGCTCGATTATTGTTGACCTATGCATTGGATCCCCTTGTTTTGTCTGGAGGGAACAAACCTTCGGGTAGAGAGCATGTCGAAGTCTCTGTGAGGAAATTACTTTCCGAGCTGTTGGAACTAAGTGAAAAACCCCTTGATGCAGCAGCAATGAAGAAGGATACAAAATCTCCCCAAAGAAAAGAAAAACTATCAAAATTTACAAATGGTGCCTCAACTCAAGATGTTGAGATGAAGAGAGGAGATTGGATGTGTACGAAGTAAGTTACATCTGGAATGTAACTTCATTCCTTCTTTGAACTACTTTTCTATTAGCTTGAATCTCTTTGTTTCTTTTGATGGGGAAAACAAAGCTACTTTGGTACTATTGTTGGGGGCTGTGCTTTGAATTAGGAGCTAGAAACAGGTACAAAGCTACTTTAAGTCTTTAACTTGACCAGTATCTTCAATATTTTATTTTTTACCATTCATTTCTCTAAAAAAATTATAAAAAAAAAAAGGATATAGATGATTAATTTTTAAGAAGTGAAAAGTAAACCTCCCGGCCCTCCCCTAATACACAGCACAAAACGAAGGAAAATAAATGACTAATTAGACAACAAAGATTTTCTGAAGCTCTTTCAAGGACGAGCAGTATATTAGTGCTCATTACAGCCTGTTCTAAATATAAATTCAACTATTAATTTAATTGGCATTTGGTGGTTTATTATTCAAGAGATGGTTAGATGATAAGGTTAATTTTTTTATTTTTTTTTGACGCTCATGCCTTTAAAATTTTGTTTCCAATGGGATTAATTTTAGGCTGCTATCCCCATCTGTGGCCTGAAAAAGACCTCGACCTCGACTTGAATGCTTACTCACCATTGCATTATTATATAAGAGGAAGTTTTGGATCATGTTATGCAATATGGCCGATTAGGATTGCTTTGGAAAAGTTCAGGAACAGATTGGATGGGTAGAAGCGAGGTTGTGTTTTTTGGGGCAAGAGATTAATTTGCATGCTGTTTTTTTTGTAGTCTACAGTGTTCTTTCCACTGTAGGAAACCTTATGAATTACAAAAAGTTATAAGCTTGTCATGCGAATAAAAATGATTATTAAGAAGGTTAACATGCGGAAAATAAAGTAGTAAGAAGTTTGTGGCCAGAAAAACATGTATATTCTTCATGAATGTTTCATTGTACCTGTAAGCTCTATATCTTTGTGCTGATGAGATGTGGACGAGACCCAAGATCCTCTTAATTTAACTCTTGATATTCTGATTTAAAACTTCCTTTTTTGCAGATGCAACTTTTTGAATTTTGCTAGAAACATAAGATGTTTAAAATGTAACGAAGATGGTCCTAAAAGAGTTCGTTCAAATGATATTGAAATGAAGAACGGAGATTGGATCTGTCCAGAGTAAGCACATGTCCACTCTTGGTCACACTAACAAACAATTATTTGGTTTTTTAATATTCGTATCTCTACTGACCTTATTGATAAACTTAATAATTTTCTTACAAGTTAAGGCAATAAATATAAATTACTGTTGTACAAATAATCCCTCATAGACGTGTCATGTCATGTACTGATAGATATACTGTTTGATTGAACAATAATTTCCTTTGCCTAAAACTACTGTTGCAAGAGTTATAAGTATAGATTCTGCTGCTCTAATATGATCTAATGATGATAAGTAATATAAGAGGACTTTAGCTCATCTTTCTGAAAATAGGCGGTTTATCTTGATTTGTCAATGCTTCTTTTAGATCCAGACCATCAAATACATCCCTGATTAAACTCTTTCATATTCCATGTGTTATGTAATAGATGCAACTTTATGAACTTCTCAAAAAATATTCGCTGCTTAAAGTGCAAAACAGAGGGGCCGAGGAAGATTAATGACAAAGAAATCGAAATGAAGAAGGGAGATTGGATCTGCCCGCAGTAAGTTCATAACTTATCTTTATGTCACTTCCATCAATAATGGTCCAGTTTTCTATTACAGTAGGGTCTGCAGATACGTGCACTCACGGAAAATAGACTGTCTTATTTCACGTTTATCTGCTGGGTCTGATTGCTCAATAATGTAATTGTTATGTCGAGATATTGGATCTGACAATAATTTTAGTACCTAGCCTCTTGAGAAAAAGTGGGTCAGAGGTAAAATGGATGCCAATATCAACCTATCGCTCTGATTTCTATTTCAGAAAAACGAGTTCTTTCCTTTTCTATGAACCGACTGGAAAAATGATTAATTTATTGGAGGCAGATTTTTTGGGCGAGGTATGTTTGGTCAAGTGGATTGACATTGACAGTTCCTAGTGTAAAAAGTACTCTGTGTAACAAGAGAAATTTGACAATAAGCTTATTTGTCAAAAAATTTCCAAGTTATTTGATTTAAATCTAAATATGACAATGTTTAGTGTATAAACTTATTTTTTATGTGATTCCTCAGTCGGATCAGAGTGTTTTCATCTCTTTTCTCATTGTGCAACTTTCACGTTCATCTGTTGTTGTATTCTGTAAAATTTGTTTTCTATTTGACAATGCTGTTCTCTGCTGGTGCGTTTACCCTACAGATGTACATTCATGAACTTTGCCAATAACATGAAATGTTTGCGTTGCCGAGAACATCGTCCGAGGAGAGATATGAATCCAGGAGAATGGGAATGTCCTTCGTAAGTTTGCTCTCTTGCACCATTTTCTATTAAACGACAATGAGGATTTGAACCTTTAACGATAAGAAAGCAAAAGCACATGTTTTTATGTGGAGCTATACTCTTTGTCAGTCTCTTTCGCACTCATATGTTTCAATGGGCAGCTTAACCAATCTACAGTAAGTACTAACCTAATGTCAAATCCTTTGGCTTCTATAGGTGTGATTTTTTGAATTACAGAGGGAACATGAGCTGCCGCAAGTGCAATGTTGAGCGTCCTAAACAAGAAATAAGTGCCGAGTACACAGAGCAACTATGGAAGTCACCCAGGGAAAGATGACGTCCAAGGCCAGCAGCTTGATTAAATTTTGGGATGTTTTGTGATTGAGTTATTTTTCCATTAATTCTATTGTTTTATGGCGATATTTATTTTGGCTATTACTATTTTAATTGTCTTTATCCAATTCCTAGGGATTTTTATTTAGAGTATGTGTCTTGACATACCAATCTGTCCATAAATGTTATTGGAAGAGGAGGTATTTGATTTTGGGCATATTTGAGAGATAAAAAATGGTTAAAATCAATTTTTATGATGTTTAAATTTCATCGGCCACTTTTTGAAAATCAAGCCTATTTTCCTCCTAATTTTTTTCCCATGTTCTACATTTT

mRNA sequence

TTTGCACCCATTTTGAGATCAAACTAGTATTTTAACTAGTAGCTATCAACAAAAAGACCATTTTCCCTTTGTTTTTTAATTGGAACCCGAAAATCGCCACCCGTACAAAAATCCCCCTCTAAAACCCATCTGCGGATATAAAACATCTCTAATGGCTAAACCCTTTTCGTTTCCGTCAAAATCCACCGAACACACGGTCATGGCAGCTCCAAAGTTCTTGCAGTTCGGCACTGCAATCTCCCGAACTACACCCAGAGCTCTATCGCCCCTCCTCTTCCCCAGAAGACTCCCGCCGAAGCTCATATCCTTCATCAGGTGCAGTTCTTCTACCGCGCTTGATGCCGCCGGCAGCAGCGGCGCTGATGCTCCCCAACAACACTCCACCCTCACTCACCACCCATGGCCTGAATGGGTTTCCTTCGTCGATGGCCTGAGGACCAAGGGTTACTTGATCGAACCTCCTTCAGAAGATGCAACTACGCCATCTGGGACTGATTACAGCGACATGAACGTGTTGAAGGATGCTTGCGTCAGCTTTGCGCGCGATCGATACGATATTTTCAAATCATTGTCCACAGATGATATTCAAACGATTGTGAAGGATGGATGCCCCAATCTCTTCCGGAAAGTTGTTAATTCAGCTAAAAGGTTGAGGGCTTATGTGCAACTAGATGAAGGGGACGTTTGTAGTACCTGCAACCTTCGAGGCTCCTGTGATAGAGCTTATGTTATTTTAAAGGAAACAGAAGCAACTGCAAGAACTGTGGATGTAGCTCGATTATTGTTGACCTATGCATTGGATCCCCTTGTTTTGTCTGGAGGGAACAAACCTTCGGGTAGAGAGCATGTCGAAGTCTCTGTGAGGAAATTACTTTCCGAGCTGTTGGAACTAAGTGAAAAACCCCTTGATGCAGCAGCAATGAAGAAGGATACAAAATCTCCCCAAAGAAAAGAAAAACTATCAAAATTTACAAATGGTGCCTCAACTCAAGATGTTGAGATGAAGAGAGGAGATTGGATGTGTACGAAATGCAACTTTTTGAATTTTGCTAGAAACATAAGATGTTTAAAATGTAACGAAGATGGTCCTAAAAGAGTTCGTTCAAATGATATTGAAATGAAGAACGGAGATTGGATCTGTCCAGAATGCAACTTTATGAACTTCTCAAAAAATATTCGCTGCTTAAAGTGCAAAACAGAGGGGCCGAGGAAGATTAATGACAAAGAAATCGAAATGAAGAAGGGAGATTGGATCTGCCCGCAATGTACATTCATGAACTTTGCCAATAACATGAAATGTTTGCGTTGCCGAGAACATCGTCCGAGGAGAGATATGAATCCAGGAGAATGGGAATGTCCTTCGTGTGATTTTTTGAATTACAGAGGGAACATGAGCTGCCGCAAGTGCAATGTTGAGCGTCCTAAACAAGAAATAAGTGCCGAGTACACAGAGCAACTATGGAAGTCACCCAGGGAAAGATGACGTCCAAGGCCAGCAGCTTGATTAAATTTTGGGATGTTTTGTGATTGAGTTATTTTTCCATTAATTCTATTGTTTTATGGCGATATTTATTTTGGCTATTACTATTTTAATTGTCTTTATCCAATTCCTAGGGATTTTTATTTAGAGTATGTGTCTTGACATACCAATCTGTCCATAAATGTTATTGGAAGAGGAGGTATTTGATTTTGGGCATATTTGAGAGATAAAAAATGGTTAAAATCAATTTTTATGATGTTTAAATTTCATCGGCCACTTTTTGAAAATCAAGCCTATTTTCCTCCTAATTTTTTTCCCATGTTCTACATTTT

Coding sequence (CDS)

ATGGCTAAACCCTTTTCGTTTCCGTCAAAATCCACCGAACACACGGTCATGGCAGCTCCAAAGTTCTTGCAGTTCGGCACTGCAATCTCCCGAACTACACCCAGAGCTCTATCGCCCCTCCTCTTCCCCAGAAGACTCCCGCCGAAGCTCATATCCTTCATCAGGTGCAGTTCTTCTACCGCGCTTGATGCCGCCGGCAGCAGCGGCGCTGATGCTCCCCAACAACACTCCACCCTCACTCACCACCCATGGCCTGAATGGGTTTCCTTCGTCGATGGCCTGAGGACCAAGGGTTACTTGATCGAACCTCCTTCAGAAGATGCAACTACGCCATCTGGGACTGATTACAGCGACATGAACGTGTTGAAGGATGCTTGCGTCAGCTTTGCGCGCGATCGATACGATATTTTCAAATCATTGTCCACAGATGATATTCAAACGATTGTGAAGGATGGATGCCCCAATCTCTTCCGGAAAGTTGTTAATTCAGCTAAAAGGTTGAGGGCTTATGTGCAACTAGATGAAGGGGACGTTTGTAGTACCTGCAACCTTCGAGGCTCCTGTGATAGAGCTTATGTTATTTTAAAGGAAACAGAAGCAACTGCAAGAACTGTGGATGTAGCTCGATTATTGTTGACCTATGCATTGGATCCCCTTGTTTTGTCTGGAGGGAACAAACCTTCGGGTAGAGAGCATGTCGAAGTCTCTGTGAGGAAATTACTTTCCGAGCTGTTGGAACTAAGTGAAAAACCCCTTGATGCAGCAGCAATGAAGAAGGATACAAAATCTCCCCAAAGAAAAGAAAAACTATCAAAATTTACAAATGGTGCCTCAACTCAAGATGTTGAGATGAAGAGAGGAGATTGGATGTGTACGAAATGCAACTTTTTGAATTTTGCTAGAAACATAAGATGTTTAAAATGTAACGAAGATGGTCCTAAAAGAGTTCGTTCAAATGATATTGAAATGAAGAACGGAGATTGGATCTGTCCAGAATGCAACTTTATGAACTTCTCAAAAAATATTCGCTGCTTAAAGTGCAAAACAGAGGGGCCGAGGAAGATTAATGACAAAGAAATCGAAATGAAGAAGGGAGATTGGATCTGCCCGCAATGTACATTCATGAACTTTGCCAATAACATGAAATGTTTGCGTTGCCGAGAACATCGTCCGAGGAGAGATATGAATCCAGGAGAATGGGAATGTCCTTCGTGTGATTTTTTGAATTACAGAGGGAACATGAGCTGCCGCAAGTGCAATGTTGAGCGTCCTAAACAAGAAATAAGTGCCGAGTACACAGAGCAACTATGGAAGTCACCCAGGGAAAGATGA

Protein sequence

MAKPFSFPSKSTEHTVMAAPKFLQFGTAISRTTPRALSPLLFPRRLPPKLISFIRCSSSTALDAAGSSGADAPQQHSTLTHHPWPEWVSFVDGLRTKGYLIEPPSEDATTPSGTDYSDMNVLKDACVSFARDRYDIFKSLSTDDIQTIVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGSCDRAYVILKETEATARTVDVARLLLTYALDPLVLSGGNKPSGREHVEVSVRKLLSELLELSEKPLDAAAMKKDTKSPQRKEKLSKFTNGASTQDVEMKRGDWMCTKCNFLNFARNIRCLKCNEDGPKRVRSNDIEMKNGDWICPECNFMNFSKNIRCLKCKTEGPRKINDKEIEMKKGDWICPQCTFMNFANNMKCLRCREHRPRRDMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQEISAEYTEQLWKSPRER
Homology
BLAST of Clc06G15400 vs. NCBI nr
Match: XP_038878457.1 (zinc finger protein VAR3, chloroplastic [Benincasa hispida])

HSP 1 Score: 804.7 bits (2077), Expect = 4.1e-229
Identity = 385/436 (88.30%), Postives = 405/436 (92.89%), Query Frame = 0

Query: 17  MAAPKFLQFGTAISRTTPRALSPLLFPRRLPPKLISFIRCSSSTALDAAGSSGADAPQQH 76
           MAAPKFL  GT+ISRTT RALSPLLFPRRLPPKLISFI+  SST LD+AGS G DAPQ H
Sbjct: 1   MAAPKFLHVGTSISRTTSRALSPLLFPRRLPPKLISFIKRISSTVLDSAGSGGPDAPQPH 60

Query: 77  STLTHHPWPEWVSFVDGLRTKGYLIEPPSEDAT---------TPSGTDYSDMNVLKDACV 136
           STLTHHPWPEWVSFVDGLRTKGYLIEPPSEDAT         TPS TDYSDMNVLK+AC+
Sbjct: 61  STLTHHPWPEWVSFVDGLRTKGYLIEPPSEDATEDGTGGEAATPSVTDYSDMNVLKNACI 120

Query: 137 SFARDRYDIFKSLSTDDIQTIVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 196
           SFARDRYDIFKSLSTDDIQTIVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS
Sbjct: 121 SFARDRYDIFKSLSTDDIQTIVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 180

Query: 197 CDRAYVILKETEATARTVDVARLLLTYALDPLVLSGGNKPSGREHVEVSVRKLLSELLEL 256
           CDRAYV LKETEATARTVD+ARLLLTYALDPLVLSGG+KPSGREHVEVSVRKLLSEL EL
Sbjct: 181 CDRAYVFLKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELSEL 240

Query: 257 SEKPLDAAAMKKDTKSPQRKEKLSKFTNGASTQDVEMKRGDWMCTKCNFLNFARNIRCLK 316
           SEKPLD AA+K DTKSP RKEK SKFTN ASTQDVEMKRGDWMCTKCNFLNF+RN RCLK
Sbjct: 241 SEKPLDPAAVKDDTKSPPRKEKPSKFTNDASTQDVEMKRGDWMCTKCNFLNFSRNRRCLK 300

Query: 317 CNEDGPKRVRSNDIEMKNGDWICPECNFMNFSKNIRCLKCKTEGPRKINDKEIEMKKGDW 376
           CNEDGPKRV +NDIEMK+GDWICPECNFMNFS+NIRCLKCKTEGPRK+N +EIEMKKGDW
Sbjct: 301 CNEDGPKRVWANDIEMKSGDWICPECNFMNFSRNIRCLKCKTEGPRKLNGEEIEMKKGDW 360

Query: 377 ICPQCTFMNFANNMKCLRCREHRPRRDMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQE 436
           +CPQCTFMNFANN KCLRCR+HRP+R+MNPGEWECPSCDFLNYRGNMSCRKCNVERPKQ+
Sbjct: 361 VCPQCTFMNFANNKKCLRCRKHRPKREMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQK 420

Query: 437 ISAEYTEQLWKSPRER 444
           ISAEY EQLW+SPRER
Sbjct: 421 ISAEYEEQLWESPRER 436

BLAST of Clc06G15400 vs. NCBI nr
Match: XP_022135506.1 (zinc finger protein VAR3, chloroplastic [Momordica charantia])

HSP 1 Score: 752.3 bits (1941), Expect = 2.4e-213
Identity = 359/437 (82.15%), Postives = 390/437 (89.24%), Query Frame = 0

Query: 17  MAAPKFLQFGTAISRTTPRALSPLLFPRRLPPKLISFIRCSSSTALDAAGSSGADAPQQH 76
           M+APKFL FGTAISRTT RALSPLL PRR PPKL+ F+ CSSSTA D+A S GADAPQQ 
Sbjct: 1   MSAPKFLYFGTAISRTTSRALSPLLLPRRFPPKLLRFVNCSSSTAPDSATSGGADAPQQL 60

Query: 77  STLTHHPWPEWVSFVDGLRTKGYLIE-PPSEDA---------TTPSGTDYSDMNVLKDAC 136
           STLTHHPWPEWVSFVDGL+TKGYL E  PSEDA          T S   YSDMNVLKDAC
Sbjct: 61  STLTHHPWPEWVSFVDGLKTKGYLTESSPSEDADGGGGGGDGATASENVYSDMNVLKDAC 120

Query: 137 VSFARDRYDIFKSLSTDDIQTIVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRG 196
           +SFARDRYD+FKSLSTDDIQT+VK GCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRG
Sbjct: 121 LSFARDRYDVFKSLSTDDIQTVVKGGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRG 180

Query: 197 SCDRAYVILKETEATARTVDVARLLLTYALDPLVLSGGNKPSGREHVEVSVRKLLSELLE 256
           SCDRAYVILKE EATARTVD+AR+LLTYALDPLVLSGG+KP GREHVEVSVRKLLS+L E
Sbjct: 181 SCDRAYVILKEPEATARTVDIARMLLTYALDPLVLSGGDKPLGREHVEVSVRKLLSKLSE 240

Query: 257 LSEKPLDAAAMKKDTKSPQRKEKLSKFTNGASTQDVEMKRGDWMCTKCNFLNFARNIRCL 316
           LSEKPLD+A  K DTKSP RKEK SKFTN A ++DVEMKRGDWMCTKCNFLNF+RN RCL
Sbjct: 241 LSEKPLDSAIEKADTKSPSRKEKTSKFTNDALSKDVEMKRGDWMCTKCNFLNFSRNRRCL 300

Query: 317 KCNEDGPKRVRSNDIEMKNGDWICPECNFMNFSKNIRCLKCKTEGPRKINDKEIEMKKGD 376
           +CNEDGPKRVR+++IEMK+GDW CPECNFMNFS+NIRCLKCK EGP+++ND EIEMKKGD
Sbjct: 301 ECNEDGPKRVRADEIEMKSGDWTCPECNFMNFSRNIRCLKCKAEGPKRMNDDEIEMKKGD 360

Query: 377 WICPQCTFMNFANNMKCLRCREHRPRRDMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQ 436
           WICPQC FMNFA+N KCLRCREHRP+RD+NPGEWECPSCDFLNYR NMSCRKCN ERPKQ
Sbjct: 361 WICPQCAFMNFASNKKCLRCREHRPKRDLNPGEWECPSCDFLNYRRNMSCRKCNGERPKQ 420

Query: 437 EISAEYTEQLWKSPRER 444
           EIS+EY +QLW+SPRER
Sbjct: 421 EISSEYEDQLWESPRER 437

BLAST of Clc06G15400 vs. NCBI nr
Match: XP_008453486.1 (PREDICTED: zinc finger protein VAR3, chloroplastic [Cucumis melo] >KAA0058143.1 zinc finger protein VAR3 [Cucumis melo var. makuwa] >TYK28498.1 zinc finger protein VAR3 [Cucumis melo var. makuwa])

HSP 1 Score: 751.1 bits (1938), Expect = 5.3e-213
Identity = 355/436 (81.42%), Postives = 388/436 (88.99%), Query Frame = 0

Query: 17  MAAPKFLQFGTAISRTTPRALSPLLFPRRLPPKLISFIRCSSSTALDAAGSSGADAPQQH 76
           MAAPKFL  GTAISRTT  ALSP LFPRRLP KLISF++CSSST LD+ GS GADAPQ H
Sbjct: 1   MAAPKFLHIGTAISRTTSGALSPFLFPRRLPSKLISFMKCSSSTVLDSVGSGGADAPQLH 60

Query: 77  STLTHHPWPEWVSFVDGLRTKGYLIEPPSEDAT---------TPSGTDYSDMNVLKDACV 136
           STLTHHPWPEWVSFVDGL+TKGYLIEPPSEDAT         TP   DYSDMNVLKDACV
Sbjct: 61  STLTHHPWPEWVSFVDGLKTKGYLIEPPSEDATGDGTGGDEATPPANDYSDMNVLKDACV 120

Query: 137 SFARDRYDIFKSLSTDDIQTIVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 196
           SFARDRYDIFKSLSTDDIQTIVKDGCPN+ RKVVNSAKRLRAYVQLDEGDVCSTCNLRGS
Sbjct: 121 SFARDRYDIFKSLSTDDIQTIVKDGCPNILRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 180

Query: 197 CDRAYVILKETEATARTVDVARLLLTYALDPLVLSGGNKPSGREHVEVSVRKLLSELLEL 256
           CDRAYVILK+T+ TARTVD+AR+LL YALDP+V+SGG+KPSGRE VEVSVRKLLSEL EL
Sbjct: 181 CDRAYVILKQTDGTARTVDIARVLLAYALDPVVMSGGDKPSGRERVEVSVRKLLSELSEL 240

Query: 257 SEKPLDAAAMKKDTKSPQRKEKLSKFTNGASTQDVEMKRGDWMCTKCNFLNFARNIRCLK 316
           SEKP+D AA+K+  KSP+RKEK SKF   ASTQDVEMKRGDWMCTKCNFLNFARN RCLK
Sbjct: 241 SEKPIDPAAVKEVIKSPKRKEKSSKFIEDASTQDVEMKRGDWMCTKCNFLNFARNRRCLK 300

Query: 317 CNEDGPKRVRSNDIEMKNGDWICPECNFMNFSKNIRCLKCKTEGPRKINDKEIEMKKGDW 376
           CNEDGPKRV  NDIEMKNGDWICPECNFMNFS+NIRC+KCKTEGP+K+N   +EMKKGDW
Sbjct: 301 CNEDGPKRVWENDIEMKNGDWICPECNFMNFSRNIRCMKCKTEGPKKVNVDNVEMKKGDW 360

Query: 377 ICPQCTFMNFANNMKCLRCREHRPRRDMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQE 436
           +CPQC+FMNFA+N KCLRCR  RP+R++N GEWECPSC ++N+RGN SCRKCNVERP++E
Sbjct: 361 VCPQCSFMNFASNKKCLRCRVLRPKRELNQGEWECPSCVYVNFRGNTSCRKCNVERPERE 420

Query: 437 ISAEYTEQLWKSPRER 444
           IS EY EQLW+SPRER
Sbjct: 421 ISDEYDEQLWESPRER 436

BLAST of Clc06G15400 vs. NCBI nr
Match: XP_004137347.1 (zinc finger protein VAR3, chloroplastic [Cucumis sativus] >KGN63880.1 hypothetical protein Csa_013228 [Cucumis sativus])

HSP 1 Score: 750.0 bits (1935), Expect = 1.2e-212
Identity = 354/435 (81.38%), Postives = 387/435 (88.97%), Query Frame = 0

Query: 17  MAAPKFLQFGTAISRTTPRALSPLLFPRRLPPKLISFIRCSSSTALDAAGSSGADAPQQH 76
           MAAPKFL  GTAISRTT RALSP LFPRRLP K ISF++CSSST LD+ GS GADAPQ H
Sbjct: 1   MAAPKFLYMGTAISRTTSRALSPFLFPRRLPSKFISFMKCSSSTVLDSVGSGGADAPQPH 60

Query: 77  STLTHHPWPEWVSFVDGLRTKGYLIEPPSEDAT---------TPSGTDYSDMNVLKDACV 136
           STLTHHPWPEWVSFVDGL+TKGYLIEPPSEDAT         TP   DYSDMNVLKDACV
Sbjct: 61  STLTHHPWPEWVSFVDGLKTKGYLIEPPSEDATGDGTGGEAATPPVIDYSDMNVLKDACV 120

Query: 137 SFARDRYDIFKSLSTDDIQTIVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 196
           SFARDR+DIFKSLSTDDIQTIVKDGCPNL RK VNSAKRLRAYVQLDEGDVCSTCNLRGS
Sbjct: 121 SFARDRFDIFKSLSTDDIQTIVKDGCPNLLRKAVNSAKRLRAYVQLDEGDVCSTCNLRGS 180

Query: 197 CDRAYVILKETEATARTVDVARLLLTYALDPLVLSGGNKPSGREHVEVSVRKLLSELLEL 256
           CDRAYVILK+T+ TARTVDVARLLL YALDPLVLSGG+KPSGREHVEVSVRKLLS+L EL
Sbjct: 181 CDRAYVILKQTDGTARTVDVARLLLAYALDPLVLSGGDKPSGREHVEVSVRKLLSDLSEL 240

Query: 257 SEKPLDAAAMKKDTKSPQRKEKLSKFTNGASTQDVEMKRGDWMCTKCNFLNFARNIRCLK 316
           SEKP+D AA+++ TK P RKEK SKFT  AST+DVEMKRGDWMCTKCNFLNF+RN  CLK
Sbjct: 241 SEKPIDPAAVREVTKPPTRKEKSSKFTEDASTRDVEMKRGDWMCTKCNFLNFSRNRTCLK 300

Query: 317 CNEDGPKRVRSNDIEMKNGDWICPECNFMNFSKNIRCLKCKTEGPRKINDKEIEMKKGDW 376
           CNEDGPKRVR NDIEMK+GDWICPEC FMNFS+NIRC+KCKTEGP+K+N ++ EMKKGDW
Sbjct: 301 CNEDGPKRVRENDIEMKSGDWICPECKFMNFSRNIRCIKCKTEGPKKVNVEQAEMKKGDW 360

Query: 377 ICPQCTFMNFANNMKCLRCREHRPRRDMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQE 436
           +CPQC+FMNFA+N KCLRCRE RP+R++N GEWECP C ++N+RGNMSCRKCN ERP+QE
Sbjct: 361 VCPQCSFMNFASNKKCLRCRELRPKRELNRGEWECPMCAYVNFRGNMSCRKCNAERPEQE 420

Query: 437 ISAEYTEQLWKSPRE 443
           IS EY EQLW+SPRE
Sbjct: 421 ISDEYEEQLWESPRE 435

BLAST of Clc06G15400 vs. NCBI nr
Match: XP_022988446.1 (zinc finger protein VAR3, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 747.3 bits (1928), Expect = 7.7e-212
Identity = 354/436 (81.19%), Postives = 391/436 (89.68%), Query Frame = 0

Query: 17  MAAPKFLQFGTAISRTTPRALSPLLFPRRLPPKLISFIRCSSSTALDAAGSSGADAPQQH 76
           M+APKF+ FGTAISRTT RALSPLLFPRRLPPKLISFI+CSSST LD+A S GADA Q +
Sbjct: 1   MSAPKFMYFGTAISRTTSRALSPLLFPRRLPPKLISFIKCSSSTGLDSASSGGADASQSY 60

Query: 77  STLTHHPWPEWVSFVDGLRTKGYLIEPPSE---------DATTPSGTDYSDMNVLKDACV 136
           S LTHHPWPEWVSFVDGLRTKGYL+EP  E         DATT S  DY+DMNVLKDAC+
Sbjct: 61  SGLTHHPWPEWVSFVDGLRTKGYLVEPTVEDGNGDGSGGDATTTSVNDYNDMNVLKDACL 120

Query: 137 SFARDRYDIFKSLSTDDIQTIVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 196
           +FAR+RYDIFKSLSTDDIQT+VKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS
Sbjct: 121 NFARERYDIFKSLSTDDIQTLVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 180

Query: 197 CDRAYVILKETEATARTVDVARLLLTYALDPLVLSGGNKPSGREHVEVSVRKLLSELLEL 256
           C RAYVILKETEATARTVD+ARLLLTYAL+P+VLSGG+KP GREHVEVS RKLLSELLEL
Sbjct: 181 CGRAYVILKETEATARTVDIARLLLTYALEPVVLSGGDKPPGREHVEVSARKLLSELLEL 240

Query: 257 SEKPLDAAAMKKDTKSPQRKEKLSKFTNGASTQDVEMKRGDWMCTKCNFLNFARNIRCLK 316
           SEKP+DA+A+K DTKS +RKEK SKFT+ A +QDVEMKRGDWMCTKCNFLNF+RN +CLK
Sbjct: 241 SEKPIDASAVKADTKSTRRKEKPSKFTDDALSQDVEMKRGDWMCTKCNFLNFSRNRKCLK 300

Query: 317 CNEDGPKRVRSNDIEMKNGDWICPECNFMNFSKNIRCLKCKTEGPRKINDKEIEMKKGDW 376
           CNEDGPKRV ++DIEMKNGDWICPEC FMNFS+N+ CLKCKTEGP+KI+  EIEMKKGDW
Sbjct: 301 CNEDGPKRVHADDIEMKNGDWICPECKFMNFSRNVNCLKCKTEGPKKIDVGEIEMKKGDW 360

Query: 377 ICPQCTFMNFANNMKCLRCREHRPRRDMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQE 436
           +CP+CTFMNFA+N KCLRCREHRP+R+MNPGEWECPSCDFLNYR NM CRKC+ ERPK+ 
Sbjct: 361 VCPKCTFMNFASNKKCLRCREHRPKREMNPGEWECPSCDFLNYRRNMVCRKCDGERPKRG 420

Query: 437 ISAEYTEQLWKSPRER 444
            S EY EQLW+SPR R
Sbjct: 421 ASDEYEEQLWESPRGR 436

BLAST of Clc06G15400 vs. ExPASy Swiss-Prot
Match: Q8S9K3 (Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VAR3 PE=1 SV=2)

HSP 1 Score: 144.1 bits (362), Expect = 3.9e-33
Identity = 85/273 (31.14%), Postives = 145/273 (53.11%), Query Frame = 0

Query: 85  PEWVSFVDGLRTKGYLIEPPS----EDATTPSGTDYSDMNVLKDACVSFARDRYDIFKSL 144
           PEW   +  L   GY  +  S    E    P   D      L  AC++ AR+R ++ + L
Sbjct: 93  PEWTELLQSLSKAGYFSDSGSISGLESEFFPGFPDELLRPAL--ACLALARERPELLEML 152

Query: 145 STDDIQTIVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGSCDRAYVILKETEA 204
           S  D++ +V++G P LF+   +S KR+  Y++     +    ++                
Sbjct: 153 SRRDVEVLVENGKPFLFKTGPDSLKRMSLYLRSGLQGIGKLMDME--------------- 212

Query: 205 TARTVDVARLLLTYALDPLVLSGGNKPSGREHVEVSVRKLLSELLELSEKPLDAAAMKKD 264
            A TVD+ RL+L+Y +D +  S  +K   +E +E SVR LLS++ ++S +P ++     D
Sbjct: 213 KASTVDLMRLILSYVVD-VASSEESKQHNKEIMESSVRSLLSQIAKMSLRPPESNV--HD 272

Query: 265 TKSPQRKEKLSKFTNGASTQDVEMKRGDWMCTKCNFLNFARNIRCLKCNEDGPKRVRSND 324
           T   Q  ++  +    +   +VEMKRGDW+C++C+ +NFARN++C +C+E  PKR     
Sbjct: 273 TMQNQYSDRDGQGVR-SFQNNVEMKRGDWICSRCSGMNFARNVKCFQCDEARPKR----- 332

Query: 325 IEMKNGDWICPECNFMNFSKNIRCLKCKTEGPR 354
            ++   +W CP+C+F N+ +N+ CL+C  + PR
Sbjct: 333 -QLTGSEWECPQCDFYNYGRNVACLRCDCKRPR 338

BLAST of Clc06G15400 vs. ExPASy TrEMBL
Match: A0A6J1C0Y6 (zinc finger protein VAR3, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007446 PE=4 SV=1)

HSP 1 Score: 752.3 bits (1941), Expect = 1.2e-213
Identity = 359/437 (82.15%), Postives = 390/437 (89.24%), Query Frame = 0

Query: 17  MAAPKFLQFGTAISRTTPRALSPLLFPRRLPPKLISFIRCSSSTALDAAGSSGADAPQQH 76
           M+APKFL FGTAISRTT RALSPLL PRR PPKL+ F+ CSSSTA D+A S GADAPQQ 
Sbjct: 1   MSAPKFLYFGTAISRTTSRALSPLLLPRRFPPKLLRFVNCSSSTAPDSATSGGADAPQQL 60

Query: 77  STLTHHPWPEWVSFVDGLRTKGYLIE-PPSEDA---------TTPSGTDYSDMNVLKDAC 136
           STLTHHPWPEWVSFVDGL+TKGYL E  PSEDA          T S   YSDMNVLKDAC
Sbjct: 61  STLTHHPWPEWVSFVDGLKTKGYLTESSPSEDADGGGGGGDGATASENVYSDMNVLKDAC 120

Query: 137 VSFARDRYDIFKSLSTDDIQTIVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRG 196
           +SFARDRYD+FKSLSTDDIQT+VK GCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRG
Sbjct: 121 LSFARDRYDVFKSLSTDDIQTVVKGGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRG 180

Query: 197 SCDRAYVILKETEATARTVDVARLLLTYALDPLVLSGGNKPSGREHVEVSVRKLLSELLE 256
           SCDRAYVILKE EATARTVD+AR+LLTYALDPLVLSGG+KP GREHVEVSVRKLLS+L E
Sbjct: 181 SCDRAYVILKEPEATARTVDIARMLLTYALDPLVLSGGDKPLGREHVEVSVRKLLSKLSE 240

Query: 257 LSEKPLDAAAMKKDTKSPQRKEKLSKFTNGASTQDVEMKRGDWMCTKCNFLNFARNIRCL 316
           LSEKPLD+A  K DTKSP RKEK SKFTN A ++DVEMKRGDWMCTKCNFLNF+RN RCL
Sbjct: 241 LSEKPLDSAIEKADTKSPSRKEKTSKFTNDALSKDVEMKRGDWMCTKCNFLNFSRNRRCL 300

Query: 317 KCNEDGPKRVRSNDIEMKNGDWICPECNFMNFSKNIRCLKCKTEGPRKINDKEIEMKKGD 376
           +CNEDGPKRVR+++IEMK+GDW CPECNFMNFS+NIRCLKCK EGP+++ND EIEMKKGD
Sbjct: 301 ECNEDGPKRVRADEIEMKSGDWTCPECNFMNFSRNIRCLKCKAEGPKRMNDDEIEMKKGD 360

Query: 377 WICPQCTFMNFANNMKCLRCREHRPRRDMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQ 436
           WICPQC FMNFA+N KCLRCREHRP+RD+NPGEWECPSCDFLNYR NMSCRKCN ERPKQ
Sbjct: 361 WICPQCAFMNFASNKKCLRCREHRPKRDLNPGEWECPSCDFLNYRRNMSCRKCNGERPKQ 420

Query: 437 EISAEYTEQLWKSPRER 444
           EIS+EY +QLW+SPRER
Sbjct: 421 EISSEYEDQLWESPRER 437

BLAST of Clc06G15400 vs. ExPASy TrEMBL
Match: A0A5D3DYH9 (Zinc finger protein VAR3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G001330 PE=4 SV=1)

HSP 1 Score: 751.1 bits (1938), Expect = 2.6e-213
Identity = 355/436 (81.42%), Postives = 388/436 (88.99%), Query Frame = 0

Query: 17  MAAPKFLQFGTAISRTTPRALSPLLFPRRLPPKLISFIRCSSSTALDAAGSSGADAPQQH 76
           MAAPKFL  GTAISRTT  ALSP LFPRRLP KLISF++CSSST LD+ GS GADAPQ H
Sbjct: 1   MAAPKFLHIGTAISRTTSGALSPFLFPRRLPSKLISFMKCSSSTVLDSVGSGGADAPQLH 60

Query: 77  STLTHHPWPEWVSFVDGLRTKGYLIEPPSEDAT---------TPSGTDYSDMNVLKDACV 136
           STLTHHPWPEWVSFVDGL+TKGYLIEPPSEDAT         TP   DYSDMNVLKDACV
Sbjct: 61  STLTHHPWPEWVSFVDGLKTKGYLIEPPSEDATGDGTGGDEATPPANDYSDMNVLKDACV 120

Query: 137 SFARDRYDIFKSLSTDDIQTIVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 196
           SFARDRYDIFKSLSTDDIQTIVKDGCPN+ RKVVNSAKRLRAYVQLDEGDVCSTCNLRGS
Sbjct: 121 SFARDRYDIFKSLSTDDIQTIVKDGCPNILRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 180

Query: 197 CDRAYVILKETEATARTVDVARLLLTYALDPLVLSGGNKPSGREHVEVSVRKLLSELLEL 256
           CDRAYVILK+T+ TARTVD+AR+LL YALDP+V+SGG+KPSGRE VEVSVRKLLSEL EL
Sbjct: 181 CDRAYVILKQTDGTARTVDIARVLLAYALDPVVMSGGDKPSGRERVEVSVRKLLSELSEL 240

Query: 257 SEKPLDAAAMKKDTKSPQRKEKLSKFTNGASTQDVEMKRGDWMCTKCNFLNFARNIRCLK 316
           SEKP+D AA+K+  KSP+RKEK SKF   ASTQDVEMKRGDWMCTKCNFLNFARN RCLK
Sbjct: 241 SEKPIDPAAVKEVIKSPKRKEKSSKFIEDASTQDVEMKRGDWMCTKCNFLNFARNRRCLK 300

Query: 317 CNEDGPKRVRSNDIEMKNGDWICPECNFMNFSKNIRCLKCKTEGPRKINDKEIEMKKGDW 376
           CNEDGPKRV  NDIEMKNGDWICPECNFMNFS+NIRC+KCKTEGP+K+N   +EMKKGDW
Sbjct: 301 CNEDGPKRVWENDIEMKNGDWICPECNFMNFSRNIRCMKCKTEGPKKVNVDNVEMKKGDW 360

Query: 377 ICPQCTFMNFANNMKCLRCREHRPRRDMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQE 436
           +CPQC+FMNFA+N KCLRCR  RP+R++N GEWECPSC ++N+RGN SCRKCNVERP++E
Sbjct: 361 VCPQCSFMNFASNKKCLRCRVLRPKRELNQGEWECPSCVYVNFRGNTSCRKCNVERPERE 420

Query: 437 ISAEYTEQLWKSPRER 444
           IS EY EQLW+SPRER
Sbjct: 421 ISDEYDEQLWESPRER 436

BLAST of Clc06G15400 vs. ExPASy TrEMBL
Match: A0A1S3BX61 (zinc finger protein VAR3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103494186 PE=4 SV=1)

HSP 1 Score: 751.1 bits (1938), Expect = 2.6e-213
Identity = 355/436 (81.42%), Postives = 388/436 (88.99%), Query Frame = 0

Query: 17  MAAPKFLQFGTAISRTTPRALSPLLFPRRLPPKLISFIRCSSSTALDAAGSSGADAPQQH 76
           MAAPKFL  GTAISRTT  ALSP LFPRRLP KLISF++CSSST LD+ GS GADAPQ H
Sbjct: 1   MAAPKFLHIGTAISRTTSGALSPFLFPRRLPSKLISFMKCSSSTVLDSVGSGGADAPQLH 60

Query: 77  STLTHHPWPEWVSFVDGLRTKGYLIEPPSEDAT---------TPSGTDYSDMNVLKDACV 136
           STLTHHPWPEWVSFVDGL+TKGYLIEPPSEDAT         TP   DYSDMNVLKDACV
Sbjct: 61  STLTHHPWPEWVSFVDGLKTKGYLIEPPSEDATGDGTGGDEATPPANDYSDMNVLKDACV 120

Query: 137 SFARDRYDIFKSLSTDDIQTIVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 196
           SFARDRYDIFKSLSTDDIQTIVKDGCPN+ RKVVNSAKRLRAYVQLDEGDVCSTCNLRGS
Sbjct: 121 SFARDRYDIFKSLSTDDIQTIVKDGCPNILRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 180

Query: 197 CDRAYVILKETEATARTVDVARLLLTYALDPLVLSGGNKPSGREHVEVSVRKLLSELLEL 256
           CDRAYVILK+T+ TARTVD+AR+LL YALDP+V+SGG+KPSGRE VEVSVRKLLSEL EL
Sbjct: 181 CDRAYVILKQTDGTARTVDIARVLLAYALDPVVMSGGDKPSGRERVEVSVRKLLSELSEL 240

Query: 257 SEKPLDAAAMKKDTKSPQRKEKLSKFTNGASTQDVEMKRGDWMCTKCNFLNFARNIRCLK 316
           SEKP+D AA+K+  KSP+RKEK SKF   ASTQDVEMKRGDWMCTKCNFLNFARN RCLK
Sbjct: 241 SEKPIDPAAVKEVIKSPKRKEKSSKFIEDASTQDVEMKRGDWMCTKCNFLNFARNRRCLK 300

Query: 317 CNEDGPKRVRSNDIEMKNGDWICPECNFMNFSKNIRCLKCKTEGPRKINDKEIEMKKGDW 376
           CNEDGPKRV  NDIEMKNGDWICPECNFMNFS+NIRC+KCKTEGP+K+N   +EMKKGDW
Sbjct: 301 CNEDGPKRVWENDIEMKNGDWICPECNFMNFSRNIRCMKCKTEGPKKVNVDNVEMKKGDW 360

Query: 377 ICPQCTFMNFANNMKCLRCREHRPRRDMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQE 436
           +CPQC+FMNFA+N KCLRCR  RP+R++N GEWECPSC ++N+RGN SCRKCNVERP++E
Sbjct: 361 VCPQCSFMNFASNKKCLRCRVLRPKRELNQGEWECPSCVYVNFRGNTSCRKCNVERPERE 420

Query: 437 ISAEYTEQLWKSPRER 444
           IS EY EQLW+SPRER
Sbjct: 421 ISDEYDEQLWESPRER 436

BLAST of Clc06G15400 vs. ExPASy TrEMBL
Match: A0A0A0LPQ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025120 PE=4 SV=1)

HSP 1 Score: 750.0 bits (1935), Expect = 5.8e-213
Identity = 354/435 (81.38%), Postives = 387/435 (88.97%), Query Frame = 0

Query: 17  MAAPKFLQFGTAISRTTPRALSPLLFPRRLPPKLISFIRCSSSTALDAAGSSGADAPQQH 76
           MAAPKFL  GTAISRTT RALSP LFPRRLP K ISF++CSSST LD+ GS GADAPQ H
Sbjct: 1   MAAPKFLYMGTAISRTTSRALSPFLFPRRLPSKFISFMKCSSSTVLDSVGSGGADAPQPH 60

Query: 77  STLTHHPWPEWVSFVDGLRTKGYLIEPPSEDAT---------TPSGTDYSDMNVLKDACV 136
           STLTHHPWPEWVSFVDGL+TKGYLIEPPSEDAT         TP   DYSDMNVLKDACV
Sbjct: 61  STLTHHPWPEWVSFVDGLKTKGYLIEPPSEDATGDGTGGEAATPPVIDYSDMNVLKDACV 120

Query: 137 SFARDRYDIFKSLSTDDIQTIVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 196
           SFARDR+DIFKSLSTDDIQTIVKDGCPNL RK VNSAKRLRAYVQLDEGDVCSTCNLRGS
Sbjct: 121 SFARDRFDIFKSLSTDDIQTIVKDGCPNLLRKAVNSAKRLRAYVQLDEGDVCSTCNLRGS 180

Query: 197 CDRAYVILKETEATARTVDVARLLLTYALDPLVLSGGNKPSGREHVEVSVRKLLSELLEL 256
           CDRAYVILK+T+ TARTVDVARLLL YALDPLVLSGG+KPSGREHVEVSVRKLLS+L EL
Sbjct: 181 CDRAYVILKQTDGTARTVDVARLLLAYALDPLVLSGGDKPSGREHVEVSVRKLLSDLSEL 240

Query: 257 SEKPLDAAAMKKDTKSPQRKEKLSKFTNGASTQDVEMKRGDWMCTKCNFLNFARNIRCLK 316
           SEKP+D AA+++ TK P RKEK SKFT  AST+DVEMKRGDWMCTKCNFLNF+RN  CLK
Sbjct: 241 SEKPIDPAAVREVTKPPTRKEKSSKFTEDASTRDVEMKRGDWMCTKCNFLNFSRNRTCLK 300

Query: 317 CNEDGPKRVRSNDIEMKNGDWICPECNFMNFSKNIRCLKCKTEGPRKINDKEIEMKKGDW 376
           CNEDGPKRVR NDIEMK+GDWICPEC FMNFS+NIRC+KCKTEGP+K+N ++ EMKKGDW
Sbjct: 301 CNEDGPKRVRENDIEMKSGDWICPECKFMNFSRNIRCIKCKTEGPKKVNVEQAEMKKGDW 360

Query: 377 ICPQCTFMNFANNMKCLRCREHRPRRDMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQE 436
           +CPQC+FMNFA+N KCLRCRE RP+R++N GEWECP C ++N+RGNMSCRKCN ERP+QE
Sbjct: 361 VCPQCSFMNFASNKKCLRCRELRPKRELNRGEWECPMCAYVNFRGNMSCRKCNAERPEQE 420

Query: 437 ISAEYTEQLWKSPRE 443
           IS EY EQLW+SPRE
Sbjct: 421 ISDEYEEQLWESPRE 435

BLAST of Clc06G15400 vs. ExPASy TrEMBL
Match: A0A6J1JH77 (zinc finger protein VAR3, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485691 PE=4 SV=1)

HSP 1 Score: 747.3 bits (1928), Expect = 3.7e-212
Identity = 354/436 (81.19%), Postives = 391/436 (89.68%), Query Frame = 0

Query: 17  MAAPKFLQFGTAISRTTPRALSPLLFPRRLPPKLISFIRCSSSTALDAAGSSGADAPQQH 76
           M+APKF+ FGTAISRTT RALSPLLFPRRLPPKLISFI+CSSST LD+A S GADA Q +
Sbjct: 1   MSAPKFMYFGTAISRTTSRALSPLLFPRRLPPKLISFIKCSSSTGLDSASSGGADASQSY 60

Query: 77  STLTHHPWPEWVSFVDGLRTKGYLIEPPSE---------DATTPSGTDYSDMNVLKDACV 136
           S LTHHPWPEWVSFVDGLRTKGYL+EP  E         DATT S  DY+DMNVLKDAC+
Sbjct: 61  SGLTHHPWPEWVSFVDGLRTKGYLVEPTVEDGNGDGSGGDATTTSVNDYNDMNVLKDACL 120

Query: 137 SFARDRYDIFKSLSTDDIQTIVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 196
           +FAR+RYDIFKSLSTDDIQT+VKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS
Sbjct: 121 NFARERYDIFKSLSTDDIQTLVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 180

Query: 197 CDRAYVILKETEATARTVDVARLLLTYALDPLVLSGGNKPSGREHVEVSVRKLLSELLEL 256
           C RAYVILKETEATARTVD+ARLLLTYAL+P+VLSGG+KP GREHVEVS RKLLSELLEL
Sbjct: 181 CGRAYVILKETEATARTVDIARLLLTYALEPVVLSGGDKPPGREHVEVSARKLLSELLEL 240

Query: 257 SEKPLDAAAMKKDTKSPQRKEKLSKFTNGASTQDVEMKRGDWMCTKCNFLNFARNIRCLK 316
           SEKP+DA+A+K DTKS +RKEK SKFT+ A +QDVEMKRGDWMCTKCNFLNF+RN +CLK
Sbjct: 241 SEKPIDASAVKADTKSTRRKEKPSKFTDDALSQDVEMKRGDWMCTKCNFLNFSRNRKCLK 300

Query: 317 CNEDGPKRVRSNDIEMKNGDWICPECNFMNFSKNIRCLKCKTEGPRKINDKEIEMKKGDW 376
           CNEDGPKRV ++DIEMKNGDWICPEC FMNFS+N+ CLKCKTEGP+KI+  EIEMKKGDW
Sbjct: 301 CNEDGPKRVHADDIEMKNGDWICPECKFMNFSRNVNCLKCKTEGPKKIDVGEIEMKKGDW 360

Query: 377 ICPQCTFMNFANNMKCLRCREHRPRRDMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQE 436
           +CP+CTFMNFA+N KCLRCREHRP+R+MNPGEWECPSCDFLNYR NM CRKC+ ERPK+ 
Sbjct: 361 VCPKCTFMNFASNKKCLRCREHRPKREMNPGEWECPSCDFLNYRRNMVCRKCDGERPKRG 420

Query: 437 ISAEYTEQLWKSPRER 444
            S EY EQLW+SPR R
Sbjct: 421 ASDEYEEQLWESPRGR 436

BLAST of Clc06G15400 vs. TAIR 10
Match: AT1G48570.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 397.5 bits (1020), Expect = 1.4e-110
Identity = 215/467 (46.04%), Postives = 281/467 (60.17%), Query Frame = 0

Query: 17  MAAPKFLQFGTAISRTTPRALSPLLFPRRLPPKLISFIRCSSSTALDAAGSSGADAPQQH 76
           M++ +    G +I R    +  PL F  R P   + F RC SS   DAA +         
Sbjct: 1   MSSSRIFLVGNSIFRPHKPSF-PLSF-NRFPSVSLRF-RCFSS---DAAAAVATTVDSDS 60

Query: 77  STLTHHPWPEWVSFVDGLRTKGYLIEPPSEDATTPSGTDYSDMNVLKDACVSFARDRYDI 136
            +LT HPWPEW++FVD L+TKGY  +   +D      T Y +M ++KDAC+SFARDRYD+
Sbjct: 61  PSLTPHPWPEWITFVDRLKTKGYFTKDTEDD------TVYQEMILVKDACLSFARDRYDV 120

Query: 137 FKSLSTDDIQTIVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGSCDRAYVILK 196
            +SLS+ D+Q +V+ GCPNLFRK VNS+KR+RA+V+L+EGDVC +C+LR SCDRAYVILK
Sbjct: 121 LRSLSSGDVQALVERGCPNLFRKTVNSSKRIRAHVKLNEGDVCGSCDLRSSCDRAYVILK 180

Query: 197 ETEATARTVDVARLLLTYALDPLVLSGGNKPSGREHVEVSVRKLLSELLELSEKPLDAAA 256
           +TEA ARTVDV RLLL  ALD +V+S G  P G+E V  S R+LL EL+E SEKPL  A 
Sbjct: 181 DTEADARTVDVMRLLLFNALDSIVISRGEVPPGKELVHESARRLLLELVEFSEKPLIPAL 240

Query: 257 MKKDTK--SPQRKEKLSKFTNGASTQDVEMK----------------------------- 316
            K  +K  S   KE+  K  N   +Q V  K                             
Sbjct: 241 PKPSSKESSLPSKERAFKSRNDEPSQRVAFKSRNDDPSQRVAFKSRNDEPSHRVAFKSRN 300

Query: 317 -----------RGDWMCTKCNFLNFARNIRCLKCNEDGPKRVRSNDIEMKNGDWICPECN 376
                        DW C KC+F+NFARN RC +CNE   +R  +    +K GDW+CPEC+
Sbjct: 301 DESSQRDRPLYSADWACPKCDFVNFARNERCRECNEVADRRPVA--AVVKEGDWLCPECS 360

Query: 377 FMNFSKNIRCLKCKTEGPRKINDKEI-EMKKGDWICPQCTFMNFANNMKCLRCREHRPRR 436
           F+NF++N  CLKCK +GP+K +   I EMKKGDW C  C +MNFA+N +C  CRE R + 
Sbjct: 361 FLNFTRNQSCLKCKAKGPKKTSMVNIVEMKKGDWNCTGCGYMNFASNKQCRECREQRHKT 420

Query: 437 DMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQEISAEYTEQLWKSP 441
              PG+WECPSCDF+N+R N +C+KC  +RP Q  + +  +  WK P
Sbjct: 421 LAEPGDWECPSCDFVNFRRNDACKKCECKRPSQ-ANNDQEDHTWKRP 452

BLAST of Clc06G15400 vs. TAIR 10
Match: AT1G70650.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 260.8 bits (665), Expect = 2.0e-69
Identity = 136/344 (39.53%), Postives = 195/344 (56.69%), Query Frame = 0

Query: 82  HPWPEWVSFVDGLRTKGYLIEPPSEDATTPSGTDYSDMNVLKDACVSFARDRYDIFKSLS 141
           HPWPEW+  +  L  KGY      E++  P  +   + N ++ AC++FAR R+ + ++LS
Sbjct: 44  HPWPEWLDLMGMLAKKGYF-----EESLIPLMSS-KESNHIRTACLNFARHRFTLVRNLS 103

Query: 142 TDDIQTIVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGSCDRAYVILKETEAT 201
             DI+ I   GCP+  RKVVNS KRLRAYV +DEG+VC +CNLRG C+RAY   ++ E  
Sbjct: 104 KKDIKVIAGCGCPSTDRKVVNSGKRLRAYVGIDEGNVCGSCNLRGKCERAYAQARDDEG- 163

Query: 202 ARTVDVARLLLTYALDPLVLSGGNKPSGREHVEVSVRKLLSELLELSEKPLDAAAMKKDT 261
           ART+DV RLLLTY LD +  +  N+    + VE SVRKLL E +  S    ++A      
Sbjct: 164 ARTIDVMRLLLTYGLDSISPTVENRACQTKLVEDSVRKLLRESVAYSLTDFESA------ 223

Query: 262 KSPQRKEKLSKFTNGASTQDVEMKRGDWMCTKCNFLNFARNIRCLKCNEDGPKRVRSNDI 321
           ++    ++L   +     +D   + GDW CT+C FLNFA+NIRCL+C+    +R++    
Sbjct: 224 ETETAGDELQPNSQDIDERDPRKRPGDWYCTECKFLNFAKNIRCLRCDVFSEERLKQLKE 283

Query: 322 EMKNGDWICPECNFMNFSKNIRCLKCKTEGPRKINDKEIEMKKGDWICPQCTFMNFANNM 381
           E K+                                  + +KKGDWIC  C F+NF+ N 
Sbjct: 284 EQKD---------------------------------HLPLKKGDWICQTCNFLNFSKNT 341

Query: 382 KCLRCREHRPRRDMNPGEWECPSCDFLNYRGNMSCRKCNVERPK 426
           +CLRC++    R +NPGEWEC SC+++N+R N  C KC+ +R K
Sbjct: 344 RCLRCKDKPTLRQINPGEWECESCNYINFRRNSICLKCDHKRQK 341

BLAST of Clc06G15400 vs. TAIR 10
Match: AT1G70650.2 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 260.8 bits (665), Expect = 2.0e-69
Identity = 136/344 (39.53%), Postives = 195/344 (56.69%), Query Frame = 0

Query: 82  HPWPEWVSFVDGLRTKGYLIEPPSEDATTPSGTDYSDMNVLKDACVSFARDRYDIFKSLS 141
           HPWPEW+  +  L  KGY      E++  P  +   + N ++ AC++FAR R+ + ++LS
Sbjct: 44  HPWPEWLDLMGMLAKKGYF-----EESLIPLMSS-KESNHIRTACLNFARHRFTLVRNLS 103

Query: 142 TDDIQTIVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGSCDRAYVILKETEAT 201
             DI+ I   GCP+  RKVVNS KRLRAYV +DEG+VC +CNLRG C+RAY   ++ E  
Sbjct: 104 KKDIKVIAGCGCPSTDRKVVNSGKRLRAYVGIDEGNVCGSCNLRGKCERAYAQARDDEG- 163

Query: 202 ARTVDVARLLLTYALDPLVLSGGNKPSGREHVEVSVRKLLSELLELSEKPLDAAAMKKDT 261
           ART+DV RLLLTY LD +  +  N+    + VE SVRKLL E +  S    ++A      
Sbjct: 164 ARTIDVMRLLLTYGLDSISPTVENRACQTKLVEDSVRKLLRESVAYSLTDFESA------ 223

Query: 262 KSPQRKEKLSKFTNGASTQDVEMKRGDWMCTKCNFLNFARNIRCLKCNEDGPKRVRSNDI 321
           ++    ++L   +     +D   + GDW CT+C FLNFA+NIRCL+C+    +R++    
Sbjct: 224 ETETAGDELQPNSQDIDERDPRKRPGDWYCTECKFLNFAKNIRCLRCDVFSEERLKQLKE 283

Query: 322 EMKNGDWICPECNFMNFSKNIRCLKCKTEGPRKINDKEIEMKKGDWICPQCTFMNFANNM 381
           E K+                                  + +KKGDWIC  C F+NF+ N 
Sbjct: 284 EQKD---------------------------------HLPLKKGDWICQTCNFLNFSKNT 341

Query: 382 KCLRCREHRPRRDMNPGEWECPSCDFLNYRGNMSCRKCNVERPK 426
           +CLRC++    R +NPGEWEC SC+++N+R N  C KC+ +R K
Sbjct: 344 RCLRCKDKPTLRQINPGEWECESCNYINFRRNSICLKCDHKRQK 341

BLAST of Clc06G15400 vs. TAIR 10
Match: AT1G55040.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 216.9 bits (551), Expect = 3.4e-56
Identity = 117/293 (39.93%), Postives = 166/293 (56.66%), Query Frame = 0

Query: 82  HPWPEWVSFVDGLRTKGYL---IEPPSEDATTPSGTD----------------YSDMNVL 141
           HPWPEW+  ++ L  + Y     E   +D     G D                + D   +
Sbjct: 147 HPWPEWMELMERLVKQNYFDHRRERDDDDMVNSLGIDVSSVGLGEDENVGVALFQDFRAV 206

Query: 142 KDACVSFARDRYDIFKSLSTDDIQTIVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTC 201
           ++AC +F +DR+DI +SLS +DIQ +V  GCP   RKVV S K LR  V LDEGDVCS+C
Sbjct: 207 QNACSNFGKDRFDILRSLSRNDIQILVGHGCPATDRKVVFSGKLLRKRVHLDEGDVCSSC 266

Query: 202 NLRGSCDRAYVILKETEATARTVDVARLLLTYALDPLVLSGGNKP-SGREHVEVSVRKLL 261
           +LR SC++A+ +L   E  ART+D+ R+L TY  DPL  +  NK    ++ V+  VRKLL
Sbjct: 267 SLRNSCEKAF-LLTNKEDEARTIDLMRILFTYGFDPLNGTVANKSLLKKKSVKSVVRKLL 326

Query: 262 SELLELSEKPLDAAAMKKDTK--SPQRKEKLSKFTNGASTQDVEMKRGDWMCTKCNFLNF 321
            E+++LS  P+D        K   P+ K+            DVEMK+GDW+C KC+F+NF
Sbjct: 327 HEIVKLSAVPIDPNLTPPVIKRAPPKVKQPPPTPKRRVGRDDVEMKKGDWLCPKCDFMNF 386

Query: 322 ARNIRCLKCNEDGPKRVRSNDIEMKNGDWICPECNFMNFSKNIRCLKCKTEGP 353
           A+N  CL+C+   PKR      ++  G+W CPECNF+N+ +N+ C  C  + P
Sbjct: 387 AKNTICLQCDAKRPKR------QLLPGEWECPECNFLNYRRNMACFHCDCKRP 432

BLAST of Clc06G15400 vs. TAIR 10
Match: AT5G17790.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 144.1 bits (362), Expect = 2.8e-34
Identity = 85/273 (31.14%), Postives = 145/273 (53.11%), Query Frame = 0

Query: 85  PEWVSFVDGLRTKGYLIEPPS----EDATTPSGTDYSDMNVLKDACVSFARDRYDIFKSL 144
           PEW   +  L   GY  +  S    E    P   D      L  AC++ AR+R ++ + L
Sbjct: 93  PEWTELLQSLSKAGYFSDSGSISGLESEFFPGFPDELLRPAL--ACLALARERPELLEML 152

Query: 145 STDDIQTIVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGSCDRAYVILKETEA 204
           S  D++ +V++G P LF+   +S KR+  Y++     +    ++                
Sbjct: 153 SRRDVEVLVENGKPFLFKTGPDSLKRMSLYLRSGLQGIGKLMDME--------------- 212

Query: 205 TARTVDVARLLLTYALDPLVLSGGNKPSGREHVEVSVRKLLSELLELSEKPLDAAAMKKD 264
            A TVD+ RL+L+Y +D +  S  +K   +E +E SVR LLS++ ++S +P ++     D
Sbjct: 213 KASTVDLMRLILSYVVD-VASSEESKQHNKEIMESSVRSLLSQIAKMSLRPPESNV--HD 272

Query: 265 TKSPQRKEKLSKFTNGASTQDVEMKRGDWMCTKCNFLNFARNIRCLKCNEDGPKRVRSND 324
           T   Q  ++  +    +   +VEMKRGDW+C++C+ +NFARN++C +C+E  PKR     
Sbjct: 273 TMQNQYSDRDGQGVR-SFQNNVEMKRGDWICSRCSGMNFARNVKCFQCDEARPKR----- 332

Query: 325 IEMKNGDWICPECNFMNFSKNIRCLKCKTEGPR 354
            ++   +W CP+C+F N+ +N+ CL+C  + PR
Sbjct: 333 -QLTGSEWECPQCDFYNYGRNVACLRCDCKRPR 338

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038878457.14.1e-22988.30zinc finger protein VAR3, chloroplastic [Benincasa hispida][more]
XP_022135506.12.4e-21382.15zinc finger protein VAR3, chloroplastic [Momordica charantia][more]
XP_008453486.15.3e-21381.42PREDICTED: zinc finger protein VAR3, chloroplastic [Cucumis melo] >KAA0058143.1 ... [more]
XP_004137347.11.2e-21281.38zinc finger protein VAR3, chloroplastic [Cucumis sativus] >KGN63880.1 hypothetic... [more]
XP_022988446.17.7e-21281.19zinc finger protein VAR3, chloroplastic isoform X1 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Q8S9K33.9e-3331.14Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VAR3 ... [more]
Match NameE-valueIdentityDescription
A0A6J1C0Y61.2e-21382.15zinc finger protein VAR3, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111... [more]
A0A5D3DYH92.6e-21381.42Zinc finger protein VAR3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A1S3BX612.6e-21381.42zinc finger protein VAR3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103494186 ... [more]
A0A0A0LPQ65.8e-21381.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025120 PE=4 SV=1[more]
A0A6J1JH773.7e-21281.19zinc finger protein VAR3, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 G... [more]
Match NameE-valueIdentityDescription
AT1G48570.11.4e-11046.04zinc finger (Ran-binding) family protein [more]
AT1G70650.12.0e-6939.53Ran BP2/NZF zinc finger-like superfamily protein [more]
AT1G70650.22.0e-6939.53Ran BP2/NZF zinc finger-like superfamily protein [more]
AT1G55040.13.4e-5639.93zinc finger (Ran-binding) family protein [more]
AT5G17790.12.8e-3431.14zinc finger (Ran-binding) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 287..311
e-value: 2.6E-6
score: 37.0
coord: 326..350
e-value: 8.4E-7
score: 38.6
coord: 365..389
e-value: 1.1E-5
score: 34.9
coord: 398..422
e-value: 0.032
score: 23.4
IPR001876Zinc finger, RanBP2-typePFAMPF00641zf-RanBPcoord: 324..352
e-value: 1.2E-8
score: 34.1
coord: 363..387
e-value: 4.0E-9
score: 35.6
coord: 286..308
e-value: 9.4E-4
score: 18.4
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 400..419
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 367..386
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 363..392
score: 10.398627
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 396..425
score: 9.404914
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 285..314
score: 9.754972
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 324..353
score: 9.890478
NoneNo IPR availableGENE3D4.10.1060.10coord: 316..354
e-value: 3.8E-13
score: 50.5
coord: 355..392
e-value: 1.4E-14
score: 55.1
coord: 393..427
e-value: 8.1E-9
score: 36.6
coord: 276..315
e-value: 7.0E-13
score: 49.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..274
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..269
NoneNo IPR availablePANTHERPTHR23111:SF40ASPARAGINE-RICH PROTEINcoord: 56..355
NoneNo IPR availablePANTHERPTHR23111ZINC FINGER PROTEINcoord: 349..440
NoneNo IPR availablePANTHERPTHR23111ZINC FINGER PROTEINcoord: 56..355
NoneNo IPR availablePANTHERPTHR23111:SF40ASPARAGINE-RICH PROTEINcoord: 349..440
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 394..426
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 317..352
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 355..392
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 277..313

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc06G15400.1Clc06G15400.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding