Clc06G14780 (gene) Watermelon (cordophanus) v2

Overview
NameClc06G14780
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionTransmembrane protein 230
LocationClcChr06: 25749570 .. 25754479 (-)
RNA-Seq ExpressionClc06G14780
SyntenyClc06G14780
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATATGGAGGAGTTTTGTGGGAGCAATAGTGGTGATCAGTTGTCTTTTAGGAGGGAGATTCCGAGGAGTCAGGAGATGTGGGTGCCGCCTGAATTGGGGTTTTGGAAGATGAACATCGATGCCTCGTGGTCTGAGCTTGAAGGGGCGGGTGGTATTAGTTAGGTGGTTCATGACTCGTATGGCTCTCTCATCCTGGGTGGTTGTGAGAAAGTGGACCTCAATTGGTCCATTAAGTTCCTTGAGGCCTTGGCATTGATTAGAGGTCTGAAAGCTTTCGTTTACTATTTTGATCATGGGTCCTTTCCCATGTTCTAGTGGAGTCTGATTGTATGAATCTTATCAATGATATTAATCATAAAATTCAGGACTTGTCGGAGTTGTCGAGTTTTGTTGAGGAGATTGAGACTTTGGGCGCTTGTGCTCATGTGGTTTTCTTTTGTTGGTGTATGCGGTCTGCGAATGGGTTGGCTCAACGCATGGCTCGTGTTGCAGTGTTGGGTAGTGATAAGGTGAGATTTTTTGTTTCAGATTCTTCTTCTAGCTCTGAAGAAGTGGTTAAGATTCTTTGTATCGTTCCAGACTCTTTCTCCTCTATCTTTGAAGGGGAGGGTTGTGGTTGTTGTTAGCTTCTTTGAATGGATTTCTTTCAAAAAAAAAAAAAAGTCAAATGCACTGTCAAATTGACGGCCTCCCTTTATTGTGTGGGTCGACTTCATAAAGAATGTGTTTCAAATGATGCATTCCAACCTTCAAGAAAAACTATTCACTAAATAAATTTTTAAAAAATCACCCTAATTTCTTAAATAATTTAAAATCAACCATTTAAAATTTTTTAAACCATTGTGATTCTCTAATTAACACCGGAAATTAAACCACCTTCAAAAGAAAATTTTCCAAAATGAATAGAAATGCATTAGCTAAGATCACAATTAGAGATAATCATGGAAAAACAATACTTATCATGCCACTTCTCCATCTTGAAGTTTTTTTTTTGTTTGATTTTATATTAGTACATTGTGATTGACTTGTCAATAGTTAAGAATAACATGTCAAAGATTACCATTTTGTTTTTGTCTCACACCACTTGATGGTACCAACGAAATCGAGTGTGAACTCCCATTTCATTTTTTTTTAATTAACCGCCATAGAATATTGATTTTGGATTTCAATAATTTTTTAAACAAAAGAATTTTGACATATTTCATTTTATTATGAGACTAAACCCTACTACTTCTGGTCCTGAAGTTTCCACTCTTGAAAAAACAACTTGGGACGTATCACTCAAATCATTGGTCCGGTACTAGATGTAGCTTTTCCCCGAACAAAATGTGTAATATTTACAACGCTTTGATTTAACAAATGTTTGGAATACTTATAATATGTTGAAATTAAACCTTTACATGGACTTAAAAAAGTAATTGTCTTATAGAGTAATTCAACCATTCTTATCAAAGAGTTATTAAAAGTTAGTGCAAACTTGATTTGGAAAGTACAATATTTGTAATGTTCCCAATTCTAAGAACATAGGTGTTTAGGTTTTTATTTTTTATTTTTATAATTTTTCTTTAAGGCCAACATTTTATTAGGGTTTTAATTATTACATAGCTCTAAAGCGATTTTGAAACAATTTTGTGGATCTAAAATGATTATGTATTCAATGGTTTTTTGGTTCTTGAACCGAATTCAAGTTGACATGTTTTGGTGTTTTATAAAAGTTGAATGAGTTTCTATAATAGAATATGTGCTTCTTCCTCTCCGTCCTCCTCTTTGCATTCTTTTTCTTGTTTCTCTAAGTAAATTTTTTTATTTTTTATTTTTTATTTATTCCAGCTCTTTTTGAACAAGTCTTTGTTTTTGCAAGACTATTGTATTAACTTTGAGAAGTAACCGATATGAGACGATTAATTAACACAGTCATAACATGACACAACAATTACTATTCTGATTGACATTTAGTTATAACATGAACCTTAAGTGTATATTAATTGTCAATTTAACTAAATTTACTTTCATCTGTTAGAAAAAATATTTTAAAATATAATACATTTTTTAGTTCAATAAAATGGAATATTATATTCAACTCGCCCATTAACGTTATCTAGACAGGACCTCTTCCACAGCAATCTATTGAAAGGATCAAATATTTATTAAACAAATAATTAAATAAAAACATGTGAATATCTTAAACTTCAATTTAATATTTCTTTTATTTTTTTCTAAGAAGAACTTCAATTTAATATTTATTGTTTGCATTTAATTATTCATTAATTAAAATAAAGGTTTTATTTTCCTTCCGCCGACGTGGAAGTTTTTGCCTTTCTTTCTTCTTACTCCACCTTCGCTCAGAGTCAAAAACAGGCAGAGAGCTTCTCTTTGCTTCAAAAATCGATTTTCCACCGTCGTCATCGCCGCCTTCTTCACCAAATCCGGTACTCTTTTTCTGCAGATCGAAGCTCCGACACCTTCTTCTCCGGCAATACAGAGAAAGATGGCGTATGTGGATCATGCGTTTTCGATAACAGACGAAGACATTATGATGGATTCTCCGTTCACCGTCAACAATCGGCCTCCTATTAAGGAGATCGCTCTTGCCGTTTCTCTTCTCGTTTTCGGCATGATTGGAATCGTCGTTGGTGCCTTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGTACTCCTCTTTTTTGGTGTTTTCGAAACAATTTTGCCCTAGTTCGAGGGTTAATTTTTGGTTTGTTCTTGAAAATTTTCAGGGGTGTTTTTCTCGTTGTTGGGAGCTCTCTTGTTTATTCCAGGGTTCTATTACACGAGGATTGCCTACTATGCTTATAAGGGTTACAAGGGTTTCTCCTTTTCCAACATACCCCCTGTCTAAATGCTCAAAGTTCCAACCACTTGTACAGATTTTCCTCCACAGATTTCTTCGCTGTTGGTTCCACCCTCCCTTTCTCTTTGACTACTAGTATATCTGTTTACTATCAAGGGTGAAACATTCTATGTGGATTTGCATTGTGCATTATCAAGATAGTTCGTCTTCTGTTTCTTGGATTTTTACTTTGCAGTGGTCGGTCACATAAGCGTTTCAATGAAGGGGAAGGGAAGGCCTATATATATATACGTAGTAAATTTCTAATCAGTTTTTTTTATCTCTATAATCTGAAAATTCCTTACTTTTGCCCTTGAAAGTAAATTTCTGATCACTTTCTTTGTTGGTTTGAACACATAGTTTATCACGGGAAGAAAACAAAGAGTTAAAAGAACTAAATCAGCTTGCCAGATTCAAGTCTCTCCAGGACTTACTTAGCCCCTAGGACTAAAGAGGTTTTCCACTTTCTAAAGGCACTTAGATTTTTTCTTCATGTTTTTTTATGTATATATTTGTTTGTCAGCTTGATATCCGTCTTCTGGAAATTAGTTGATACATTGACATCTAACCTTTTTCTTATATCCATCTTGACATGCACGATGTTGTCAATTTGTTGCAGCCCTTTCTTGGCCTCTTGCAGTTGATGAATGAGTTTAGTATGTTTTGTGTTTATTTTCTTGGTCGGTAAAGATGCTTTGTAGGGTAATTTGCAGATTTGCGAGAAGACTATTGTTTTTGTGATAAGACTTGTCAGTGTGAAAATAATTTGAAGACATTGGTAATTAGAAACTGAAGTTTGATTCTTCATAAATGCTTGGACAAGTAATTTGTGTTCTCAGGAAGCATTCTCATTCTTCAGTTACTCATGTTGTGTATAGAAATACTTTTTTTTCTTCAAAATGGAGGTTTCTAGATTTTTTGTGTTCCATTATTTTCTAATTTGTACAAGAGTGAAATACTTTATAAATTTAACTATGCTACTGGATGACCCTGAGGTGAGCTGAGATGAATTAGGACAATAGCGGGTGAAGTAGTATGCCTAACATTGGGAAACTAGTTCAAGTTCTTTATACAAACATCTTAAGTTCCACCCAGAGTTGGGTGGAACTTTTAGCTTTAACTTGAATTTACTTGAGCATGAAGGTGCTAGAAGAGCTAGCATGAAGGATGCAGTTGCAGTTAAGCATTGTAATAGATGGAGAACATAAACCATTATTGTTTTCCTCTCCCTCTTTATTTGGTATTTTACATTTTTTTTTTTACTGTAAATATCAATAATGCGCCCTTTGTAGGACATGACAAACACAAACTCATTCAGGATATCAGTTGCTTAAAAATCACCATTATTCTTGTTCGGCAAAATTGCCCACATGACTCTCTAAGCAGCAGGCCTACATGGTGGTTGTTTAGCTATTCAATGGATATGTCGTTTTGCTAGTACAAGAACAATTGTTTACTGCATTGTTTTAGTCTATAGCCTTCAAGGTTGCTCATGTGCTTTTCTGGTTTACTTCTGCCAAAAAGTGTTGTTTGGAGGAAAATAAGCTGTCACCCTAGATGCTTCCTCTAGTTCTACCTTGGATTATATACATTAATCGTTGCTAAGTTCTCCTTCATGGCTTTTTCTTGTAGGACCATTTCTTCTTGAGGATCAATTTTTAGAGATTCCTGATAGTGGAACTTCTGATATTCCCCCTCCAATCTTAGCCCTGTAGCTCCTATATCATGGAGGCACTTCTCGCATCCTTTTTGCATCATTTCACATGGTTGATATTGATAGTGATATTGAGTATTATCTGATCAAGCTCTTTTTGAAGATGACTTATTCTTTAGCCTCTGTTTTTTAATCCTTTAGTAAACTATTTGCTAGTTCAATTTGAGTAGTTTCATGAATACTGGGGGTGGTTTATTTGCGAGGTTGAAGCTCTGTAGCTGCATTTGAATTGGATTGGATCAAAACAATCTAACTATTCCTTTTCCCAGCTAAGTGTCGGGGGAAGTTATATAGATATTTAATATAATACTAGTTTTGTG

mRNA sequence

ATGCATATGGAGGAGTTTTGTGGGAGCAATAGTGGTGATCAGTTGTCTTTTAGGAGGGAGATTCCGAGGAGTCAGGAGATGTGGGTGCCGCCTGAATTGGGGTTTTGGAAGATGAACATCGATGCCTCGTGGTCTGAGCTTGAAGGGGCGGGTGTGGAGTCTGATTGTATGAATCTTATCAATGATATTAATCATAAAATTCAGGACTTGTCGGAGTTGTCGAGTTTTGTTGAGGAGATTGAGACTTTGGGCGCTTGTGCTCATGTGGTTTTCTTTTGTTGGTGTATGCGGTCTGCGAATGGGTTGGCTCAACGCATGGCTCGTGTTGCAGTGTTGGGTAGTGATAAGAGAGCTTCTCTTTGCTTCAAAAATCGATTTTCCACCGTCGTCATCGCCGCCTTCTTCACCAAATCCGGTACTCTTTTTCTGCAGATCGAAGCTCCGACACCTTCTTCTCCGGCAATACAGAGAAAGATGGCGTATGTGGATCATGCGTTTTCGATAACAGACGAAGACATTATGATGGATTCTCCGTTCACCGTCAACAATCGGCCTCCTATTAAGGAGATCGCTCTTGCCGTTTCTCTTCTCGTTTTCGGCATGATTGGAATCGTCGTTGGTGCCTTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGTACTCCTCTTTTTTGGTGTTTTCGAAACAATTTTGCCCTAGTTCGAGGGTTAATTTTTGGTTTGTTCTTGAAAATTTTCAGGGGTGTTTTTCTCGTTGTTGGGAGCTCTCTTGTTTATTCCAGGGTTCTATTACACGAGGATTGCCTACTATGCTTATAAGGGTTACAAGGGTTTCTCCTTTTCCAACATACCCCCTGTCTAAATGCTCAAAGTTCCAACCACTTGTACAGATTTTCCTCCACAGATTTCTTCGCTGACCATTTCTTCTTGAGGATCAATTTTTAGAGATTCCTGATAGTGGAACTTCTGATATTCCCCCTCCAATCTTAGCCCTGTAGCTCCTATATCATGGAGGCACTTCTCGCATCCTTTTTGCATCATTTCACATGGTTGATATTGATAGTGATATTGAGTATTATCTGATCAAGCTCTTTTTGAAGATGACTTATTCTTTAGCCTCTGTTTTTTAATCCTTTAGTAAACTATTTGCTAGTTCAATTTGAGTAGTTTCATGAATACTGGGGGTGGTTTATTTGCGAGGTTGAAGCTCTGTAGCTGCATTTGAATTGGATTGGATCAAAACAATCTAACTATTCCTTTTCCCAGCTAAGTGTCGGGGGAAGTTATATAGATATTTAATATAATACTAGTTTTGTG

Coding sequence (CDS)

ATGCATATGGAGGAGTTTTGTGGGAGCAATAGTGGTGATCAGTTGTCTTTTAGGAGGGAGATTCCGAGGAGTCAGGAGATGTGGGTGCCGCCTGAATTGGGGTTTTGGAAGATGAACATCGATGCCTCGTGGTCTGAGCTTGAAGGGGCGGGTGTGGAGTCTGATTGTATGAATCTTATCAATGATATTAATCATAAAATTCAGGACTTGTCGGAGTTGTCGAGTTTTGTTGAGGAGATTGAGACTTTGGGCGCTTGTGCTCATGTGGTTTTCTTTTGTTGGTGTATGCGGTCTGCGAATGGGTTGGCTCAACGCATGGCTCGTGTTGCAGTGTTGGGTAGTGATAAGAGAGCTTCTCTTTGCTTCAAAAATCGATTTTCCACCGTCGTCATCGCCGCCTTCTTCACCAAATCCGGTACTCTTTTTCTGCAGATCGAAGCTCCGACACCTTCTTCTCCGGCAATACAGAGAAAGATGGCGTATGTGGATCATGCGTTTTCGATAACAGACGAAGACATTATGATGGATTCTCCGTTCACCGTCAACAATCGGCCTCCTATTAAGGAGATCGCTCTTGCCGTTTCTCTTCTCGTTTTCGGCATGATTGGAATCGTCGTTGGTGCCTTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGTACTCCTCTTTTTTGGTGTTTTCGAAACAATTTTGCCCTAGTTCGAGGGTTAATTTTTGGTTTGTTCTTGAAAATTTTCAGGGGTGTTTTTCTCGTTGTTGGGAGCTCTCTTGTTTATTCCAGGGTTCTATTACACGAGGATTGCCTACTATGCTTATAA

Protein sequence

MHMEEFCGSNSGDQLSFRREIPRSQEMWVPPELGFWKMNIDASWSELEGAGVESDCMNLINDINHKIQDLSELSSFVEEIETLGACAHVVFFCWCMRSANGLAQRMARVAVLGSDKRASLCFKNRFSTVVIAAFFTKSGTLFLQIEAPTPSSPAIQRKMAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGTPLFWCFRNNFALVRGLIFGLFLKIFRGVFLVVGSSLVYSRVLLHEDCLLCL
Homology
[Close]
BLAST of Clc06G14780 vs. NCBI nr
Match: XP_008453547.1 (PREDICTED: transmembrane protein 230-like [Cucumis melo])

HSP 1 Score: 130.2 bits (326), Expect = 2.8e-26
Identity = 68/83 (81.93%), Postives = 72/83 (86.75%), Query Frame = 0 

Query: 159 MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 218
           MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGI+VGAFMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60

Query: 219 RAHGTPLFWCFRNNFALVRGLIF 242
           RAHG          F+L+ GL+F
Sbjct: 61  RAHGV--------FFSLLGGLLF 75

[Close]
BLAST of Clc06G14780 vs. NCBI nr
Match: XP_004146339.1 (transmembrane protein 230 [Cucumis sativus] >KGN65495.1 hypothetical protein Csa_019721 [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 8.0e-26
Identity = 67/83 (80.72%), Postives = 71/83 (85.54%), Query Frame = 0 

Query: 159 MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 218
           MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGI+VGAFMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60

Query: 219 RAHGTPLFWCFRNNFALVRGLIF 242
           R HG          F+L+ GL+F
Sbjct: 61  RVHGV--------FFSLLGGLLF 75

[Close]
BLAST of Clc06G14780 vs. NCBI nr
Match: XP_038879685.1 (transmembrane protein 230 [Benincasa hispida])

HSP 1 Score: 128.6 bits (322), Expect = 8.0e-26
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 159 MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 218
           MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60

Query: 219 RAHG 223
           RAHG
Sbjct: 61  RAHG 64

[Close]
BLAST of Clc06G14780 vs. NCBI nr
Match: KAG7021684.1 (Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 124.8 bits (312), Expect = 1.2e-24
Identity = 62/64 (96.88%), Postives = 62/64 (96.88%), Query Frame = 0 

Query: 159 MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 218
           MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLL FGMIGIVVG FMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGD 60

Query: 219 RAHG 223
           RAHG
Sbjct: 61  RAHG 64

[Close]
BLAST of Clc06G14780 vs. NCBI nr
Match: XP_022931504.1 (transmembrane protein 230-like [Cucurbita moschata] >XP_022972056.1 transmembrane protein 230-like [Cucurbita maxima] >XP_023529399.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >KAG6587719.1 Transmembrane protein 230, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 124.4 bits (311), Expect = 1.5e-24
Identity = 61/64 (95.31%), Postives = 62/64 (96.88%), Query Frame = 0 

Query: 159 MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 218
           MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLL FGMIGI+VG FMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD 60

Query: 219 RAHG 223
           RAHG
Sbjct: 61  RAHG 64

[Close]
BLAST of Clc06G14780 vs. ExPASy TrEMBL
Match: A0A1S3BWL2 (Transmembrane protein 230 OS=Cucumis melo OX=3656 GN=LOC103494229 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.3e-26
Identity = 68/83 (81.93%), Postives = 72/83 (86.75%), Query Frame = 0 

Query: 159 MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 218
           MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGI+VGAFMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60

Query: 219 RAHGTPLFWCFRNNFALVRGLIF 242
           RAHG          F+L+ GL+F
Sbjct: 61  RAHGV--------FFSLLGGLLF 75

[Close]
BLAST of Clc06G14780 vs. ExPASy TrEMBL
Match: A0A0A0LUC1 (Transmembrane protein 230 OS=Cucumis sativus OX=3659 GN=Csa_1G426960 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 3.9e-26
Identity = 67/83 (80.72%), Postives = 71/83 (85.54%), Query Frame = 0 

Query: 159 MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 218
           MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGI+VGAFMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60

Query: 219 RAHGTPLFWCFRNNFALVRGLIF 242
           R HG          F+L+ GL+F
Sbjct: 61  RVHGV--------FFSLLGGLLF 75

[Close]
BLAST of Clc06G14780 vs. ExPASy TrEMBL
Match: A0A6J1I4W8 (Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111470698 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 7.3e-25
Identity = 61/64 (95.31%), Postives = 62/64 (96.88%), Query Frame = 0 

Query: 159 MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 218
           MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLL FGMIGI+VG FMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD 60

Query: 219 RAHG 223
           RAHG
Sbjct: 61  RAHG 64

[Close]
BLAST of Clc06G14780 vs. ExPASy TrEMBL
Match: A0A6J1EUE9 (Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111437657 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 7.3e-25
Identity = 61/64 (95.31%), Postives = 62/64 (96.88%), Query Frame = 0 

Query: 159 MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 218
           MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLL FGMIGI+VG FMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD 60

Query: 219 RAHG 223
           RAHG
Sbjct: 61  RAHG 64

[Close]
BLAST of Clc06G14780 vs. ExPASy TrEMBL
Match: A0A6J1JDX9 (Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111484930 PE=3 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.1e-24
Identity = 61/64 (95.31%), Postives = 62/64 (96.88%), Query Frame = 0 

Query: 159 MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 218
           MAYVDHAFSI DEDI+MDSPF VNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD
Sbjct: 1   MAYVDHAFSIADEDIVMDSPFPVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60

Query: 219 RAHG 223
           RAHG
Sbjct: 61  RAHG 64

[Close]
BLAST of Clc06G14780 vs. TAIR 10
Match: AT4G29850.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 107.1 bits (266), Expect = 2.3e-23
Identity = 51/64 (79.69%), Postives = 58/64 (90.62%), Query Frame = 0 

Query: 159 MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 218
           MAYVDHAFSITDEDIM+++ +TVNNRPP+KEIALAV+LLVFG +GIV G FMA NRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMIETSYTVNNRPPVKEIALAVALLVFGTLGIVSGFFMAYNRVGGD 60

Query: 219 RAHG 223
           R HG
Sbjct: 61  RGHG 64

[Close]
BLAST of Clc06G14780 vs. TAIR 10
Match: AT2G19350.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 101.3 bits (251), Expect = 1.3e-21
Identity = 47/64 (73.44%), Postives = 57/64 (89.06%), Query Frame = 0 

Query: 159 MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 218
           MAYVDHAFSI+DED+M+ + +TV+NRPP+KEI+LAV LLVFG +GIV+G FMA NRVGGD
Sbjct: 1   MAYVDHAFSISDEDLMIGTSYTVSNRPPVKEISLAVGLLVFGTLGIVLGFFMAYNRVGGD 60

Query: 219 RAHG 223
           R HG
Sbjct: 61  RGHG 64

The following BLAST results are available for this feature:
BLAST of Clc06G14780 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008453547.12.8e-2681.93PREDICTED: transmembrane protein 230-like [Cucumis melo][more]
XP_004146339.18.0e-2680.72transmembrane protein 230 [Cucumis sativus] >KGN65495.1 hypothetical protein Csa... [more]
XP_038879685.18.0e-26100.00transmembrane protein 230 [Benincasa hispida][more]
KAG7021684.11.2e-2496.88Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022931504.11.5e-2495.31transmembrane protein 230-like [Cucurbita moschata] >XP_022972056.1 transmembran... [more]
BLAST of Clc06G14780 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Clc06G14780 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BWL21.3e-2681.93Transmembrane protein 230 OS=Cucumis melo OX=3656 GN=LOC103494229 PE=3 SV=1[more]
A0A0A0LUC13.9e-2680.72Transmembrane protein 230 OS=Cucumis sativus OX=3659 GN=Csa_1G426960 PE=3 SV=1[more]
A0A6J1I4W87.3e-2595.31Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111470698 PE=3 SV=1[more]
A0A6J1EUE97.3e-2595.31Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111437657 PE=3 SV=... [more]
A0A6J1JDX92.1e-2495.31Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111484930 PE=3 SV=1[more]
BLAST of Clc06G14780 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G29850.12.3e-2379.69Eukaryotic protein of unknown function (DUF872) [more]
AT2G19350.11.3e-2173.44Eukaryotic protein of unknown function (DUF872) [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR044234Transmembrane protein 230PANTHERPTHR15664C20ORF30 PROTEINcoord: 159..223
NoneNo IPR availablePANTHERPTHR15664:SF18TRANSMEMBRANE PROTEIN 230-LIKEcoord: 159..223

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc06G14780.1Clc06G14780.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005776 autophagosome
cellular_component GO:0005768 endosome
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0016021 integral component of membrane