Clc06G14680 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G14680
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Macrophage migration inhibitory factor-like protein
Location	ClcChr06: 25661543 .. 25662450 (+)
RNA-Seq Expression	Clc06G14680
Synteny	Clc06G14680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGACTTTGAATTTATTCACGAATTTTCCAGTCGATACCGTCGTGGCCGCTGACATTCTCAAGGACGCTTCGAAAGCCATTTCTAAAATTCTCGGGAAACCTGAATCTGTTAAGTTCTCTGTCCCTTCTCCATTCTCCCTCAGTCTATTGTTTGTATTGGGTATGCTCGTTTGCACAGTTCTGGACATGCCCACATTGTGTTCGACGAAATTACTACGAGAAAGTGAAAGTCATTTTAAGTTATTGAGTTGATATTTGCCATTGCTAGATTGATAGCCGACTTGAATTTCATTTTTCTTGTTGATCGATGGAATTTTTTTTTCCCTTAATTTATTTATTTGTATGGTGATAAGTAGATAGGCATTGGAAGCATATTTATTATTAAATTACTGGTTGACCCAAAAGTTTAAGTTGACGGGTGAATAGAAATATAATATCGTATTATCTATCATTCTCCCTCACTTGTAGGCTTGAATACCCAACAAGTGAAAAGCAATATTAATTGGAGGTTTGAACACAAGAACTCCCTGAATCATTACTATGATGCTATTTTAAATCACCGACTATTCAAAAACTTAAATTGATGGTGAAGTCAGATTTAATATTATATCATTTATGATAATGGGAGGGTATAAACTTAAAACTTACATTTTTCTGCTTCAATGTTTCAGTATGTGATGATCTTGCTGAATGGTGGTACCCCGATCGTTTTTGCTGGCACGGAAGAGCCAGCCGCGTATGGAGAATTGATCGCCATAGGAGGCCTTGGACCTGGCGTGAATGGAAAACTTAGCTCAACAATTGCTGAGATTCTTCAGACTAAGCTCCATCTTGATAGTTCCCGTTTCTATATCAAATTTTATGACGTTCAGGCAAGTTTTTCTCGTCCTTCCAAAGTATCGTGA

mRNA sequence

ATGCCGACTTTGAATTTATTCACGAATTTTCCAGTCGATACCGTCGTGGCCGCTGACATTCTCAAGGACGCTTCGAAAGCCATTTCTAAAATTCTCGGGAAACCTGAATCTGTTAAGTTCTCTGTCCCTTCTCCATTCTCCCTCAGTCTATTGTTTGTATTGGGTATGCTCGTTTGCACATATGTGATGATCTTGCTGAATGGTGGTACCCCGATCGTTTTTGCTGGCACGGAAGAGCCAGCCGCGTATGGAGAATTGATCGCCATAGGAGGCCTTGGACCTGGCGTGAATGGAAAACTTAGCTCAACAATTGCTGAGATTCTTCAGACTAAGCTCCATCTTGATAGTTCCCGTTTCTATATCAAATTTTATGACGTTCAGGCAAGTTTTTCTCGTCCTTCCAAAGTATCGTGA

Coding sequence (CDS)

ATGCCGACTTTGAATTTATTCACGAATTTTCCAGTCGATACCGTCGTGGCCGCTGACATTCTCAAGGACGCTTCGAAAGCCATTTCTAAAATTCTCGGGAAACCTGAATCTGTTAAGTTCTCTGTCCCTTCTCCATTCTCCCTCAGTCTATTGTTTGTATTGGGTATGCTCGTTTGCACATATGTGATGATCTTGCTGAATGGTGGTACCCCGATCGTTTTTGCTGGCACGGAAGAGCCAGCCGCGTATGGAGAATTGATCGCCATAGGAGGCCTTGGACCTGGCGTGAATGGAAAACTTAGCTCAACAATTGCTGAGATTCTTCAGACTAAGCTCCATCTTGATAGTTCCCGTTTCTATATCAAATTTTATGACGTTCAGGCAAGTTTTTCTCGTCCTTCCAAAGTATCGTGA

Protein sequence

MPTLNLFTNFPVDTVVAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCTYVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFYIKFYDVQASFSRPSKVS

Homology

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BLAST of Clc06G14680 vs. NCBI nr
Match: TYK28576.1 (macrophage migration inhibitory factor-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 215.3 bits (547), Expect = 3.3e-52
Identity = 117/152 (76.97%), Postives = 122/152 (80.26%), Query Frame = 0


Query: 1   MPTLNLFTNFPVDTVVAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVC- 60
           MPTLNLFTN PVDTVVAADILKDASKA+SKILGKPESVKFS P P SLSLL VL +  C 
Sbjct: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESVKFSAPFPSSLSLLLVLALEACL 60

Query: 61  ---------------TYVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTI 120
                           YVMILLNGGTPIVFA TEEPAAYGELI+IGGLGPGVNGKLSSTI
Sbjct: 61  WLFKGTNLHFSSSMVQYVMILLNGGTPIVFATTEEPAAYGELISIGGLGPGVNGKLSSTI 120

Query: 121 AEILQTKLHLDSSRFYIKFYDVQASFSRPSKV 137
           AEILQTK+ +D SRFYIKFYDVQASFSRP  V
Sbjct: 121 AEILQTKIQIDGSRFYIKFYDVQASFSRPFNV 152

[Close]

BLAST of Clc06G14680 vs. NCBI nr
Match: KAA0058211.1 (macrophage migration inhibitory factor-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 214.9 bits (546), Expect = 4.3e-52
Identity = 116/152 (76.32%), Postives = 122/152 (80.26%), Query Frame = 0


Query: 1   MPTLNLFTNFPVDTVVAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVC- 60
           MPTLNLFTN PVDTVVAADILKDASKA+SKILGKPESVKFS P P SLSLL VL +  C 
Sbjct: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESVKFSAPFPSSLSLLLVLALEACL 60

Query: 61  ---------------TYVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTI 120
                           YVMILLNGGTPI+FA TEEPAAYGELI+IGGLGPGVNGKLSSTI
Sbjct: 61  WLFKGTNLHFSSSMVQYVMILLNGGTPIIFATTEEPAAYGELISIGGLGPGVNGKLSSTI 120

Query: 121 AEILQTKLHLDSSRFYIKFYDVQASFSRPSKV 137
           AEILQTK+ +D SRFYIKFYDVQASFSRP  V
Sbjct: 121 AEILQTKIQIDGSRFYIKFYDVQASFSRPFNV 152

[Close]

BLAST of Clc06G14680 vs. NCBI nr
Match: KAG7021698.1 (Macrophage migration inhibitory factor-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 188.3 bits (477), Expect = 4.3e-44
Identity = 102/136 (75.00%), Postives = 107/136 (78.68%), Query Frame = 0


Query: 1   MPTLNLFTNFPVDTVVAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MPTLNLFTN PVD VVAADILKDASKA+SKILGK ES                       
Sbjct: 1   MPTLNLFTNLPVDAVVAADILKDASKAVSKILGKSES----------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
           YVMILLNG TPIVFAGTEEPAAYGELI+IGGLGP VNGKLSSTIAEI+QTKLH+DSSRFY
Sbjct: 61  YVMILLNGSTPIVFAGTEEPAAYGELISIGGLGPSVNGKLSSTIAEIIQTKLHIDSSRFY 113

Query: 121 IKFYDVQASFSRPSKV 137
           IKF DVQASFSRPSK+
Sbjct: 121 IKFSDVQASFSRPSKL 113

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BLAST of Clc06G14680 vs. NCBI nr
Match: XP_038879720.1 (macrophage migration inhibitory factor homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 185.7 bits (470), Expect = 2.8e-43
Identity = 101/130 (77.69%), Postives = 104/130 (80.00%), Query Frame = 0


Query: 1   MPTLNLFTNFPVDTVVAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MPTLNLFTN PVDTVVAADILKDASKAISKILGKPES                       
Sbjct: 1   MPTLNLFTNVPVDTVVAADILKDASKAISKILGKPES----------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
           YVMILLNG TPIVFAGTEEPAAYGELI+IGGLGPGVNGKLSSTIAEILQTKL +DSSRFY
Sbjct: 61  YVMILLNGSTPIVFAGTEEPAAYGELISIGGLGPGVNGKLSSTIAEILQTKLQIDSSRFY 107

Query: 121 IKFYDVQASF 131
           IKFYDVQAS+
Sbjct: 121 IKFYDVQASY 107

[Close]

BLAST of Clc06G14680 vs. NCBI nr
Match: XP_022973339.1 (macrophage migration inhibitory factor homolog [Cucurbita maxima])

HSP 1 Score: 180.6 bits (457), Expect = 8.9e-42
Identity = 98/130 (75.38%), Postives = 102/130 (78.46%), Query Frame = 0


Query: 1   MPTLNLFTNFPVDTVVAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MPTLNLFTNFPVD VVAADILKDASKA+SKILGK ES                       
Sbjct: 1   MPTLNLFTNFPVDAVVAADILKDASKAVSKILGKSES----------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
           YVMILLNG TPIVFAGTEEPAAYGELI+IGGLGP VNGKLSSTIAEI+QTKLH+DSSRFY
Sbjct: 61  YVMILLNGSTPIVFAGTEEPAAYGELISIGGLGPSVNGKLSSTIAEIIQTKLHIDSSRFY 107

Query: 121 IKFYDVQASF 131
           IKF DVQASF
Sbjct: 121 IKFSDVQASF 107

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BLAST of Clc06G14680 vs. ExPASy Swiss-Prot
Match: P91850 (Macrophage migration inhibitory factor homolog OS=Brugia malayi OX=6279 GN=Bm1_28435 PE=3 SV=4)

HSP 1 Score: 72.0 bits (175), Expect = 5.8e-12
Identity = 45/129 (34.88%), Postives = 68/129 (52.71%), Query Frame = 0


Query: 1   MPTLNLFTNFPVDTVVAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MP   + TN P +++ +A  LK AS  ++K LGKPES                       
Sbjct: 1   MPYFTIDTNIPQNSISSA-FLKKASNVVAKALGKPES----------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
           YV I +NGG  +VF G+E+P A   L +IG +GP VN   +  + ++L  +L +  +R Y
Sbjct: 61  YVSIHVNGGQAMVFGGSEDPCAVCVLKSIGCVGPKVNNSHAEKLYKLLADELKIPKNRCY 105

Query: 121 IKFYDVQAS 130
           I+F D++AS
Sbjct: 121 IEFVDIEAS 105

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BLAST of Clc06G14680 vs. ExPASy Swiss-Prot
Match: P81748 (Macrophage migration inhibitory factor homolog OS=Trichuris trichiura OX=36087 PE=1 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 7.6e-12
Identity = 43/129 (33.33%), Postives = 64/129 (49.61%), Query Frame = 0


Query: 1   MPTLNLFTNFPVDTVVAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MP     TN P +  ++ D LK  SK I+ +LGKPES                       
Sbjct: 1   MPIFTFSTNVPSEN-ISVDFLKSTSKLIAGMLGKPES----------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
           YV + +NGG  I F GT+ PA +G+L+++GG+G   N   S+ + + L   L +  +R Y
Sbjct: 61  YVAVHINGGQKITFGGTDAPAGFGQLLSLGGVGGEKNRSHSAKLFKHLTDGLGIPGNRMY 105

Query: 121 IKFYDVQAS 130
           I F D++ S
Sbjct: 121 INFVDMRGS 105

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BLAST of Clc06G14680 vs. ExPASy Swiss-Prot
Match: O44786 (Macrophage migration inhibitory factor homolog OS=Wuchereria bancrofti OX=6293 GN=MIF PE=3 SV=3)

HSP 1 Score: 68.2 bits (165), Expect = 8.4e-11
Identity = 44/129 (34.11%), Postives = 65/129 (50.39%), Query Frame = 0


Query: 1   MPTLNLFTNFPVDTVVAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MP   + TN P D++ +A  LK A   + K LGKPES                       
Sbjct: 1   MPYFTIDTNKPQDSISSA-FLKKAPNVVPKALGKPES----------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
           YV I +NGG P+VF G+E+P     L +IG +GP VN   +  + ++L  +L +  +R Y
Sbjct: 61  YVSIHVNGGQPMVFGGSEDPCPVCVLKSIGCVGPKVNNSHAEKLYKLLADELKIPKNRCY 105

Query: 121 IKFYDVQAS 130
           I+  D++AS
Sbjct: 121 IESVDIEAS 105

[Close]

BLAST of Clc06G14680 vs. ExPASy TrEMBL
Match: A0A5D3DXT1 (Macrophage migration inhibitory factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G002240 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.6e-52
Identity = 117/152 (76.97%), Postives = 122/152 (80.26%), Query Frame = 0


Query: 1   MPTLNLFTNFPVDTVVAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVC- 60
           MPTLNLFTN PVDTVVAADILKDASKA+SKILGKPESVKFS P P SLSLL VL +  C 
Sbjct: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESVKFSAPFPSSLSLLLVLALEACL 60

Query: 61  ---------------TYVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTI 120
                           YVMILLNGGTPIVFA TEEPAAYGELI+IGGLGPGVNGKLSSTI
Sbjct: 61  WLFKGTNLHFSSSMVQYVMILLNGGTPIVFATTEEPAAYGELISIGGLGPGVNGKLSSTI 120

Query: 121 AEILQTKLHLDSSRFYIKFYDVQASFSRPSKV 137
           AEILQTK+ +D SRFYIKFYDVQASFSRP  V
Sbjct: 121 AEILQTKIQIDGSRFYIKFYDVQASFSRPFNV 152

[Close]

BLAST of Clc06G14680 vs. ExPASy TrEMBL
Match: A0A5A7UXJ9 (Macrophage migration inhibitory factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G005330 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 2.1e-52
Identity = 116/152 (76.32%), Postives = 122/152 (80.26%), Query Frame = 0


Query: 1   MPTLNLFTNFPVDTVVAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVC- 60
           MPTLNLFTN PVDTVVAADILKDASKA+SKILGKPESVKFS P P SLSLL VL +  C 
Sbjct: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESVKFSAPFPSSLSLLLVLALEACL 60

Query: 61  ---------------TYVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTI 120
                           YVMILLNGGTPI+FA TEEPAAYGELI+IGGLGPGVNGKLSSTI
Sbjct: 61  WLFKGTNLHFSSSMVQYVMILLNGGTPIIFATTEEPAAYGELISIGGLGPGVNGKLSSTI 120

Query: 121 AEILQTKLHLDSSRFYIKFYDVQASFSRPSKV 137
           AEILQTK+ +D SRFYIKFYDVQASFSRP  V
Sbjct: 121 AEILQTKIQIDGSRFYIKFYDVQASFSRPFNV 152

[Close]

BLAST of Clc06G14680 vs. ExPASy TrEMBL
Match: A0A6J1IEA5 (macrophage migration inhibitory factor homolog OS=Cucurbita maxima OX=3661 GN=LOC111471895 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 4.3e-42
Identity = 98/130 (75.38%), Postives = 102/130 (78.46%), Query Frame = 0


Query: 1   MPTLNLFTNFPVDTVVAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MPTLNLFTNFPVD VVAADILKDASKA+SKILGK ES                       
Sbjct: 1   MPTLNLFTNFPVDAVVAADILKDASKAVSKILGKSES----------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
           YVMILLNG TPIVFAGTEEPAAYGELI+IGGLGP VNGKLSSTIAEI+QTKLH+DSSRFY
Sbjct: 61  YVMILLNGSTPIVFAGTEEPAAYGELISIGGLGPSVNGKLSSTIAEIIQTKLHIDSSRFY 107

Query: 121 IKFYDVQASF 131
           IKF DVQASF
Sbjct: 121 IKFSDVQASF 107

[Close]

BLAST of Clc06G14680 vs. ExPASy TrEMBL
Match: A0A0A0LXE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G425910 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 7.3e-42
Identity = 98/129 (75.97%), Postives = 101/129 (78.29%), Query Frame = 0


Query: 1   MPTLNLFTNFPVDTVVAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MPTLNLFTN PVDTVVAADILKDASKA+SKILGKPES                       
Sbjct: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPES----------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
           YVMILLNGGTPIVFA TEEPAAYGELI+IGGLGPGVNGKLSSTIAEILQTKL +D SRFY
Sbjct: 61  YVMILLNGGTPIVFATTEEPAAYGELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFY 106

Query: 121 IKFYDVQAS 130
           IKFYDVQ S
Sbjct: 121 IKFYDVQRS 106

[Close]

BLAST of Clc06G14680 vs. ExPASy TrEMBL
Match: A0A1S3BXB7 (macrophage migration inhibitory factor homolog OS=Cucumis melo OX=3656 GN=LOC103494235 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.6e-41
Identity = 96/129 (74.42%), Postives = 101/129 (78.29%), Query Frame = 0


Query: 1   MPTLNLFTNFPVDTVVAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MPTLNLFTN PVDTVVAADILKDASKA+SKILGKPES                       
Sbjct: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPES----------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
           YVMILLNGGTPI+FA TEEPAAYGELI+IGGLGPGVNGKLSSTIAEILQTK+ +D SRFY
Sbjct: 61  YVMILLNGGTPIIFATTEEPAAYGELISIGGLGPGVNGKLSSTIAEILQTKIQIDGSRFY 106

Query: 121 IKFYDVQAS 130
           IKFYDVQ S
Sbjct: 121 IKFYDVQRS 106

[Close]

BLAST of Clc06G14680 vs. TAIR 10
Match: AT5G57170.1 (Tautomerase/MIF superfamily protein )

HSP 1 Score: 160.2 bits (404), Expect = 1.2e-39
Identity = 85/130 (65.38%), Postives = 93/130 (71.54%), Query Frame = 0


Query: 1   MPTLNLFTNFPVDTVVAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MPTLNLFTN PVD V  +DILKDA+KA++KI+GKPES                       
Sbjct: 1   MPTLNLFTNIPVDAVTCSDILKDATKAVAKIIGKPES----------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
           YVMILLN G PI FAGTEEPAAYGELI+IGGLGPGVNGKLS TI+EILQ KL +DSSRFY
Sbjct: 61  YVMILLNSGVPIAFAGTEEPAAYGELISIGGLGPGVNGKLSETISEILQIKLSIDSSRFY 107

Query: 121 IKFYDVQASF 131
           IKFYD    F
Sbjct: 121 IKFYDSPRPF 107

[Close]

BLAST of Clc06G14680 vs. TAIR 10
Match: AT5G57170.2 (Tautomerase/MIF superfamily protein )

HSP 1 Score: 160.2 bits (404), Expect = 1.2e-39
Identity = 85/129 (65.89%), Postives = 93/129 (72.09%), Query Frame = 0


Query: 1   MPTLNLFTNFPVDTVVAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MPTLNLFTN PVD V  +DILKDA+KA++KI+GKPES                       
Sbjct: 1   MPTLNLFTNIPVDAVTCSDILKDATKAVAKIIGKPES----------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
           YVMILLN G PI FAGTEEPAAYGELI+IGGLGPGVNGKLS TI+EILQ KL +DSSRFY
Sbjct: 61  YVMILLNSGVPIAFAGTEEPAAYGELISIGGLGPGVNGKLSETISEILQIKLSIDSSRFY 106

Query: 121 IKFYDVQAS 130
           IKFYD   S
Sbjct: 121 IKFYDSPVS 106

[Close]

BLAST of Clc06G14680 vs. TAIR 10
Match: AT5G01650.1 (Tautomerase/MIF superfamily protein )

HSP 1 Score: 112.8 bits (281), Expect = 2.1e-25
Identity = 60/130 (46.15%), Postives = 80/130 (61.54%), Query Frame = 0


Query: 1   MPTLNLFTNFPVDTVVAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MP LNL TN  +D V  + IL +AS  ++KI+GKPE+                       
Sbjct: 1   MPCLNLSTNVNLDGVDTSSILSEASSTVAKIIGKPEN----------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
           YVMI+L G  P+ F GTE+PAAYGEL++IGGL   VN KLS+ ++ IL+TKL +  SRF+
Sbjct: 61  YVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNADVNKKLSAAVSAILETKLSVPKSRFF 107

Query: 121 IKFYDVQASF 131
           +KFYD + SF
Sbjct: 121 LKFYDTKGSF 107

[Close]

BLAST of Clc06G14680 vs. TAIR 10
Match: AT5G01650.2 (Tautomerase/MIF superfamily protein )

HSP 1 Score: 109.0 bits (271), Expect = 3.1e-24
Identity = 58/127 (45.67%), Postives = 78/127 (61.42%), Query Frame = 0


Query: 1   MPTLNLFTNFPVDTVVAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MP LNL TN  +D V  + IL +AS  ++KI+GKPE+                       
Sbjct: 1   MPCLNLSTNVNLDGVDTSSILSEASSTVAKIIGKPEN----------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
           YVMI+L G  P+ F GTE+PAAYGEL++IGGL   VN KLS+ ++ IL+TKL +  SRF+
Sbjct: 61  YVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNADVNKKLSAAVSAILETKLSVPKSRFF 104

Query: 121 IKFYDVQ 128
           +KFYD +
Sbjct: 121 LKFYDTK 104

[Close]

BLAST of Clc06G14680 vs. TAIR 10
Match: AT3G51660.1 (Tautomerase/MIF superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 7.8e-12
Identity = 41/136 (30.15%), Postives = 67/136 (49.26%), Query Frame = 0


Query: 1   MPTLNLFTNFPVDTVVAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MP L + TN   D V       + +KA++ I+G+P+++                      
Sbjct: 1   MPCLYITTNVNFDGVNTDPFYSEVTKAVASIVGRPQNL---------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
            VM++L G   IVF G +E AAY E++++GG+   V  +L +T+  IL T   +  +RF 
Sbjct: 61  -VMVVLKGSVEIVFGGNKEAAAYAEIVSMGGITKQVKRELIATVGSILHTHFSIHPTRFI 112

Query: 121 IKFYDVQASFSRPSKV 137
            K +D+  S   PSK+
Sbjct: 121 FKVFDIN-SLPLPSKL 112

The following BLAST results are available for this feature:

BLAST of Clc06G14680 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK28576.1	3.3e-52	76.97	macrophage migration inhibitory factor-like protein [Cucumis melo var. makuwa]	[more]
KAA0058211.1	4.3e-52	76.32	macrophage migration inhibitory factor-like protein [Cucumis melo var. makuwa]	[more]
KAG7021698.1	4.3e-44	75.00	Macrophage migration inhibitory factor-like protein, partial [Cucurbita argyrosp...	[more]
XP_038879720.1	2.8e-43	77.69	macrophage migration inhibitory factor homolog isoform X1 [Benincasa hispida]	[more]
XP_022973339.1	8.9e-42	75.38	macrophage migration inhibitory factor homolog [Cucurbita maxima]	[more]

BLAST of Clc06G14680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P91850	5.8e-12	34.88	Macrophage migration inhibitory factor homolog OS=Brugia malayi OX=6279 GN=Bm1_2...	[more]
P81748	7.6e-12	33.33	Macrophage migration inhibitory factor homolog OS=Trichuris trichiura OX=36087 P...	[more]
O44786	8.4e-11	34.11	Macrophage migration inhibitory factor homolog OS=Wuchereria bancrofti OX=6293 G...	[more]

BLAST of Clc06G14680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DXT1	1.6e-52	76.97	Macrophage migration inhibitory factor-like protein OS=Cucumis melo var. makuwa ...	[more]
A0A5A7UXJ9	2.1e-52	76.32	Macrophage migration inhibitory factor-like protein OS=Cucumis melo var. makuwa ...	[more]
A0A6J1IEA5	4.3e-42	75.38	macrophage migration inhibitory factor homolog OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A0A0LXE0	7.3e-42	75.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G425910 PE=3 SV=1	[more]
A0A1S3BXB7	1.6e-41	74.42	macrophage migration inhibitory factor homolog OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of Clc06G14680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57170.1	1.2e-39	65.38	Tautomerase/MIF superfamily protein	[more]
AT5G57170.2	1.2e-39	65.89	Tautomerase/MIF superfamily protein	[more]
AT5G01650.1	2.1e-25	46.15	Tautomerase/MIF superfamily protein	[more]
AT5G01650.2	3.1e-24	45.67	Tautomerase/MIF superfamily protein	[more]
AT3G51660.1	7.8e-12	30.15	Tautomerase/MIF superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001398	Macrophage migration inhibitory factor	PFAM	PF01187	MIF	coord: 61..129 e-value: 2.8E-10 score: 40.5
IPR001398	Macrophage migration inhibitory factor	PANTHER	PTHR11954	D-DOPACHROME DECARBOXYLASE	coord: 60..130 coord: 1..38
IPR014347	Tautomerase/MIF superfamily	GENE3D	3.30.429.10	Macrophage Migration Inhibitory Factor	coord: 2..132 e-value: 1.5E-31 score: 111.1
IPR014347	Tautomerase/MIF superfamily	SUPERFAMILY	55331	Tautomerase/MIF	coord: 1..128
None	No IPR available	PANTHER	PTHR11954:SF42	TAUTOMERASE/MIF SUPERFAMILY PROTEIN	coord: 60..130 coord: 1..38

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G14680.2	Clc06G14680.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005615	extracellular space
cellular_component	GO:0005622	intracellular anatomical structure
molecular_function	GO:0050178	phenylpyruvate tautomerase activity