Clc06G14270 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G14270
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	zinc finger protein 7
Location	ClcChr06: 25172308 .. 25173243 (-)
RNA-Seq Expression	Clc06G14270
Synteny	Clc06G14270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCCGACAACCATTGGATCCCCACTGATTCTATCGAACCCTTTTGTCTCTATGTCATTCCAAAGCCGATCCATTTTTAGTTTCACCCAATAGTGAATCCTTTATTCTCATATAACCCATCACAAATTCTTCATTTTTCTACAAAACCCACTTCTCAAAATTTCCCCTTTTTCTTTTCTTCAAACCCATCTCTCCAATTTTTCTTTCTTCATGGAGTTTAAGCGCCATCAGCAACTCAACCTTGAGCTACTTCTTGAACCATCTTCTTCTTCTTCTAATTTGTCAGCTCTTCCTTTGAGTCCAAATTGTGAGGCAGCTGCTACTGCAAGGGTTTTCTCATGCAACTATTGCAAGAGGAAGTTTTATAGCTCTCAAGCGTTGGGAGGTCACCAAAATGCTCATAAATTGGAGAGAACTTTGGCGAAGAAGAGCAGAGAGATTAGAGCTTACAGAGGAGATAATTATGATCACAACAATAATATTATGATGAATAATTCAAGCCATTTGTGGAACGTTGACACAATTACTACTACAACAACAACGACACCTCATCGTCTATTCATTGGTCCACGTGGCCTTCCAACTGATCATCATCATCATCATCATCAAGATGATCATGATGATATTGGCCATCTTGACTTGTCTTTAAGGCTCTGAATCTCATCTCTCTCTACTTCAATTTTTTATTTTACGTATAAATTTTTATAATTAATATCATTGAAGCCCCCCTTAAATTAAAGGAGAGAGTGATGGAATTGGAGAGTATTATATGTTAATCCTCTTGGATTTCCTAAAGTATTATCTGATCATTTGTGTGTTCATCTTTATATATTATTCTCCTTCAAAAACCAACCTTCACATTTGTTTTGTGCTTCTTTTCCATCTCTTGTGTCATATTATTTGTTTTGTCTTCCTTTGATTACTTTTTATATTACAG

mRNA sequence

AGCCGACAACCATTGGATCCCCACTGATTCTATCGAACCCTTTTGTCTCTATGTCATTCCAAAGCCGATCCATTTTTAGTTTCACCCAATAGTGAATCCTTTATTCTCATATAACCCATCACAAATTCTTCATTTTTCTACAAAACCCACTTCTCAAAATTTCCCCTTTTTCTTTTCTTCAAACCCATCTCTCCAATTTTTCTTTCTTCATGGAGTTTAAGCGCCATCAGCAACTCAACCTTGAGCTACTTCTTGAACCATCTTCTTCTTCTTCTAATTTGTCAGCTCTTCCTTTGAGTCCAAATTGTGAGGCAGCTGCTACTGCAAGGGTTTTCTCATGCAACTATTGCAAGAGGAAGTTTTATAGCTCTCAAGCGTTGGGAGGTCACCAAAATGCTCATAAATTGGAGAGAACTTTGGCGAAGAAGAGCAGAGAGATTAGAGCTTACAGAGGAGATAATTATGATCACAACAATAATATTATGATGAATAATTCAAGCCATTTGTGGAACGTTGACACAATTACTACTACAACAACAACGACACCTCATCGTCTATTCATTGGTCCACGTGGCCTTCCAACTGATCATCATCATCATCATCATCAAGATGATCATGATGATATTGGCCATCTTGACTTGTCTTTAAGGCTCTGAATCTCATCTCTCTCTACTTCAATTTTTTATTTTACGTATAAATTTTTATAATTAATATCATTGAAGCCCCCCTTAAATTAAAGGAGAGAGTGATGGAATTGGAGAGTATTATATGTTAATCCTCTTGGATTTCCTAAAGTATTATCTGATCATTTGTGTGTTCATCTTTATATATTATTCTCCTTCAAAAACCAACCTTCACATTTGTTTTGTGCTTCTTTTCCATCTCTTGTGTCATATTATTTGTTTTGTCTTCCTTTGATTACTTTTTATATTACAG

Coding sequence (CDS)

ATGGAGTTTAAGCGCCATCAGCAACTCAACCTTGAGCTACTTCTTGAACCATCTTCTTCTTCTTCTAATTTGTCAGCTCTTCCTTTGAGTCCAAATTGTGAGGCAGCTGCTACTGCAAGGGTTTTCTCATGCAACTATTGCAAGAGGAAGTTTTATAGCTCTCAAGCGTTGGGAGGTCACCAAAATGCTCATAAATTGGAGAGAACTTTGGCGAAGAAGAGCAGAGAGATTAGAGCTTACAGAGGAGATAATTATGATCACAACAATAATATTATGATGAATAATTCAAGCCATTTGTGGAACGTTGACACAATTACTACTACAACAACAACGACACCTCATCGTCTATTCATTGGTCCACGTGGCCTTCCAACTGATCATCATCATCATCATCATCAAGATGATCATGATGATATTGGCCATCTTGACTTGTCTTTAAGGCTCTGA

Protein sequence

MEFKRHQQLNLELLLEPSSSSSNLSALPLSPNCEAAATARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRAYRGDNYDHNNNIMMNNSSHLWNVDTITTTTTTTPHRLFIGPRGLPTDHHHHHHQDDHDDIGHLDLSLRL

Homology

[Close]

BLAST of Clc06G14270 vs. NCBI nr
Match: XP_038880343.1 (zinc finger protein 3 [Benincasa hispida])

HSP 1 Score: 228.4 bits (581), Expect = 4.0e-56
Identity = 127/155 (81.94%), Postives = 135/155 (87.10%), Query Frame = 0


Query: 1   MEFK-RHQQLNLELLLEPSSSSSNLSALPLSPNCEAAATARVFSCNYCKRKFYSSQALGG 60
           MEFK RHQQLNLELLLEPSSSS   S+ P+SPNCE AATARVFSCNYCKRKFYSSQALGG
Sbjct: 1   MEFKRRHQQLNLELLLEPSSSS---SSAPVSPNCE-AATARVFSCNYCKRKFYSSQALGG 60

Query: 61  HQNAHKLERTLAKKSREIRAYRGDNYDHNNNIMMNNSS--HLWNVDTITTTTTTTP---- 120
           HQNAHKLERTLAKKSREIRAY+GD YDH NNI+MNNSS  +LW+V+T TTTTTTTP    
Sbjct: 61  HQNAHKLERTLAKKSREIRAYKGD-YDHTNNIIMNNSSSHNLWSVETFTTTTTTTPPPPD 120

Query: 121 HRLFIGPRGLPTDHHHHHHQDDHDDIGHLDLSLRL 149
           H L IGPRG+P D HHHHHQDDHD IGHLDLSLRL
Sbjct: 121 HHLLIGPRGIPAD-HHHHHQDDHDHIGHLDLSLRL 149

[Close]

BLAST of Clc06G14270 vs. NCBI nr
Match: XP_023516743.1 (zinc finger protein 7-like [Cucurbita pepo subsp. pepo] >XP_023521837.1 zinc finger protein 7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 172.2 bits (435), Expect = 3.4e-39
Identity = 100/151 (66.23%), Postives = 109/151 (72.19%), Query Frame = 0


Query: 1   MEFKRHQQLNLELLLEPSSSSSNLSALPLSPNCEAAATARVFSCNYCKRKFYSSQALGGH 60
           MEFK HQQLNLEL+LEPSS S   S+ P+SPNCEA   ARVFSCNYCKRKFYSSQALGGH
Sbjct: 1   MEFKHHQQLNLELVLEPSSPS---SSAPVSPNCEA---ARVFSCNYCKRKFYSSQALGGH 60

Query: 61  QNAHKLERTLAKKSREIRAYRGDNYDHNNNIMMNNSSHLWNVDTITTTTTTTPHRLFIGP 120
           QNAHKLERTLAKKSRE+RAYRG   DH +N +M  SSHLW V+T+T              
Sbjct: 61  QNAHKLERTLAKKSREMRAYRG---DHGSNNVMMKSSHLWKVETLTAPPPLVIDGGRDQI 120

Query: 121 RGLPTDHH---HHHHQDDHDDIGHLDLSLRL 149
           R  P D +   HHHH    DDIGHLDLSLRL
Sbjct: 121 RAFPADQNLLLHHHHHQQADDIGHLDLSLRL 142

[Close]

BLAST of Clc06G14270 vs. NCBI nr
Match: KAG6589714.1 (Zinc finger protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023394.1 Zinc finger protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 171.8 bits (434), Expect = 4.5e-39
Identity = 102/152 (67.11%), Postives = 110/152 (72.37%), Query Frame = 0


Query: 1   MEFKRHQQLNLELLLEPSSSSSNLSALPLSPNCEAAATARVFSCNYCKRKFYSSQALGGH 60
           MEFK HQQLNLEL+LEPSS S   S+ P+SPNCEA   ARVFSCNYCKRKFYSSQALGGH
Sbjct: 1   MEFKHHQQLNLELVLEPSSPS---SSAPVSPNCEA---ARVFSCNYCKRKFYSSQALGGH 60

Query: 61  QNAHKLERTLAKKSREIRAYRGDNYDHNNNIMMNNSSHLWNVDTITTTTTTTPHRLFIGP 120
           QNAHKLERTLAKKSRE+RAYRG   DH +N +M  SSHLW V+T+T              
Sbjct: 61  QNAHKLERTLAKKSREMRAYRG---DHESNNVMMKSSHLWKVETLTAPPPLVIDGGRDQI 120

Query: 121 RGLPTDH----HHHHHQDDHDDIGHLDLSLRL 149
           R  P D     HHHHHQ   DDIGHLDLSLRL
Sbjct: 121 RAFPADQNLLLHHHHHQ--ADDIGHLDLSLRL 141

[Close]

BLAST of Clc06G14270 vs. NCBI nr
Match: XP_004146361.1 (zinc finger protein 7 [Cucumis sativus])

HSP 1 Score: 170.6 bits (431), Expect = 9.9e-39
Identity = 111/171 (64.91%), Postives = 125/171 (73.10%), Query Frame = 0


Query: 1   MEFKR-----HQQLNLELLLEPSSSSSN-LSALPLSPNCEAAATARVFSCNYCKRKFYSS 60
           MEFKR      QQLNLELLLEPSSSSSN  S+ P+SPN EA   ARVFSCNYCKRKFYSS
Sbjct: 1   MEFKRRHHHQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSS 60

Query: 61  QALGGHQNAHKLERTLAKKSREIRAYRG--DNYDHNNN-------IMMNN-SSH-LWNVD 120
           QALGGHQNAHKLERTLAKKSRE+R YR   D+++H++N       +MMNN SSH LWNV+
Sbjct: 61  QALGGHQNAHKLERTLAKKSRELRGYRSGDDHHEHHHNSNNNSMMMMMNNYSSHNLWNVE 120

Query: 121 TITTTTTTTP-----HRLFIGPRG-LPTDHHHHHHQDDHDDIGHLDLSLRL 149
           TIT++TT T      H+L  G RG +P D       DDH DIGHLDLSLRL
Sbjct: 121 TITSSTTATTIADDHHQLLNGRRGIIPAD-------DDH-DIGHLDLSLRL 163

[Close]

BLAST of Clc06G14270 vs. NCBI nr
Match: XP_022921390.1 (zinc finger protein 7 [Cucurbita moschata])

HSP 1 Score: 169.9 bits (429), Expect = 1.7e-38
Identity = 101/152 (66.45%), Postives = 111/152 (73.03%), Query Frame = 0


Query: 1   MEFKRHQQLNLELLLEPSSSSSNLSALPLSPNCEAAATARVFSCNYCKRKFYSSQALGGH 60
           MEFK HQQLNLEL+LEPSS S   S+ P+SPNCEA   ARVFSCNYCKRKFYSSQALGGH
Sbjct: 1   MEFKHHQQLNLELVLEPSSPS---SSAPVSPNCEA---ARVFSCNYCKRKFYSSQALGGH 60

Query: 61  QNAHKLERTLAKKSREIRAYRGDNYDHNNNIMMNNSSHLWNVDTITTTTTTTPHRLFIGP 120
           QNAHKLERTLAKKSRE+RAYRG   DH +N +M  SSHLW V+T+T  +           
Sbjct: 61  QNAHKLERTLAKKSREMRAYRG---DHESNNVMMKSSHLWKVETLTAPSPLVIDGGRDQI 120

Query: 121 RGLPTDHH----HHHHQDDHDDIGHLDLSLRL 149
           R  P D +    HHHHQ   DDIGHLDLSLRL
Sbjct: 121 RAFPADQNLLLLHHHHQ--ADDIGHLDLSLRL 141

[Close]

BLAST of Clc06G14270 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.4e-19
Identity = 56/82 (68.29%), Postives = 64/82 (78.05%), Query Frame = 0


Query: 3  FKRHQQLNLELLLEPSSSSSNLSALPLSPNCEAAATARVFSCNYCKRKFYSSQALGGHQN 62
          +K H QLNLEL+LEPSS SS+ S+   S +C      RVFSCNYC+RKFYSSQALGGHQN
Sbjct: 16 YKNH-QLNLELVLEPSSMSSSSSSSTNSSSC--LEQPRVFSCNYCQRKFYSSQALGGHQN 75

Query: 63 AHKLERTLAKKSREIRAYRGDN 85
          AHKLERTLAKKSRE+  +R  N
Sbjct: 76 AHKLERTLAKKSREL--FRSSN 92

[Close]

BLAST of Clc06G14270 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 4.8e-12
Identity = 41/78 (52.56%), Postives = 51/78 (65.38%), Query Frame = 0


Query: 1   MEFKRHQQLNLEL----LLEPSSSSSNLSALPLSPNCEAAATARVFSCNYCKRKFYSSQA 60
           + F  +   NL+L    L  P SS+S  S        + + + RVFSCNYC+RKFYSSQA
Sbjct: 40  LSFNNNNNNNLDLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQA 99

Query: 61  LGGHQNAHKLERTLAKKS 75
           LGGHQNAHK ERTLAK++
Sbjct: 100 LGGHQNAHKRERTLAKRA 117

[Close]

BLAST of Clc06G14270 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.4e-11
Identity = 39/64 (60.94%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 12  ELLLEPSSSSSNLSALPLSPNCEAAATARVFSCNYCKRKFYSSQALGGHQNAHKLERTLA 71
           EL L  S  +S+ S        E  A  RVFSCNYC+RKFYSSQALGGHQNAHK ERTLA
Sbjct: 38  ELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA 97

Query: 72  KKSR 76
           K+ +
Sbjct: 98  KRGQ 101

[Close]

BLAST of Clc06G14270 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.4e-11
Identity = 39/70 (55.71%), Postives = 47/70 (67.14%), Query Frame = 0


Query: 30  SPNCEAAATARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRAYRGDNYDHNN 89
           S  CE  A  RVFSCNYC+RKFYSSQALGGHQNAHK ERT+AK++     + G  + H++
Sbjct: 49  STKCE--ANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRA----MHMGRMFGHHH 108

Query: 90  NIMMNNSSHL 100
                 SS L
Sbjct: 109 RPYTYTSSSL 112

[Close]

BLAST of Clc06G14270 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.9e-08
Identity = 43/118 (36.44%), Postives = 58/118 (49.15%), Query Frame = 0


Query: 40  RVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRA---------------YRGDN 99
           ++FSCNYC+R FYSSQALGGHQNAHK ERTLAK+ + + A               + G  
Sbjct: 59  KLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSPLPFHGQY 118

Query: 100 YDHNN-NIMMNNSSHL--------WNVDTITTTTTTTPHRLFIGPRGLPTDHHHHHHQ 134
            +H +  I  ++ SH          +   I  +      +  IG      + HHHHHQ
Sbjct: 119 NNHRSLGIQAHSISHKLSSYNGFGGHYGQINWSRLPFDQQPAIGKFPSMDNFHHHHHQ 176

[Close]

BLAST of Clc06G14270 vs. ExPASy TrEMBL
Match: A0A6J1E5I0 (zinc finger protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111429682 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 8.2e-39
Identity = 101/152 (66.45%), Postives = 111/152 (73.03%), Query Frame = 0


Query: 1   MEFKRHQQLNLELLLEPSSSSSNLSALPLSPNCEAAATARVFSCNYCKRKFYSSQALGGH 60
           MEFK HQQLNLEL+LEPSS S   S+ P+SPNCEA   ARVFSCNYCKRKFYSSQALGGH
Sbjct: 1   MEFKHHQQLNLELVLEPSSPS---SSAPVSPNCEA---ARVFSCNYCKRKFYSSQALGGH 60

Query: 61  QNAHKLERTLAKKSREIRAYRGDNYDHNNNIMMNNSSHLWNVDTITTTTTTTPHRLFIGP 120
           QNAHKLERTLAKKSRE+RAYRG   DH +N +M  SSHLW V+T+T  +           
Sbjct: 61  QNAHKLERTLAKKSREMRAYRG---DHESNNVMMKSSHLWKVETLTAPSPLVIDGGRDQI 120

Query: 121 RGLPTDHH----HHHHQDDHDDIGHLDLSLRL 149
           R  P D +    HHHHQ   DDIGHLDLSLRL
Sbjct: 121 RAFPADQNLLLLHHHHQ--ADDIGHLDLSLRL 141

[Close]

BLAST of Clc06G14270 vs. ExPASy TrEMBL
Match: A0A6J1JAI3 (zinc finger protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111485036 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 4.1e-38
Identity = 101/152 (66.45%), Postives = 109/152 (71.71%), Query Frame = 0


Query: 1   MEFKRHQQLNLELLLEPSSSSSNLSALPLSPNCEAAATARVFSCNYCKRKFYSSQALGGH 60
           MEFK HQQLNLEL+LEPSS S   S+ P+SPNCEA   ARVFSCNYCKRKFYSSQALGGH
Sbjct: 1   MEFKHHQQLNLELVLEPSSPS---SSAPVSPNCEA---ARVFSCNYCKRKFYSSQALGGH 60

Query: 61  QNAHKLERTLAKKSREIRAYRGDNYDHNNNIMMNNSSHLWNVDTITTTTTTTPHRLFIGP 120
           QNAHKLERTLAKKSRE+RAYRG   DH +N +M  SSHLW V+T+T              
Sbjct: 61  QNAHKLERTLAKKSREMRAYRG---DHESNNVMMKSSHLWKVETLTAPPPLVIDGGRDQI 120

Query: 121 RGLPTDH----HHHHHQDDHDDIGHLDLSLRL 149
           R  P D     H HHHQ   DDIGHLDLSLRL
Sbjct: 121 RAFPADQNLLLHLHHHQ--ADDIGHLDLSLRL 141

[Close]

BLAST of Clc06G14270 vs. ExPASy TrEMBL
Match: A0A6J1KNT5 (zinc finger protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111497321 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.6e-34
Identity = 99/162 (61.11%), Postives = 109/162 (67.28%), Query Frame = 0


Query: 1   MEFKRHQQLNLELLLEPSSSSSNLSALPLSPNCEAAATARVFSCNYCKRKFYSSQALGGH 60
           MEFK H QLNL L LEPSSSSS+  + P+SP  E     RV+ CNYC+RKFYSSQALGGH
Sbjct: 1   MEFK-HHQLNLGLFLEPSSSSSSSYSAPVSPCSE----QRVYPCNYCQRKFYSSQALGGH 60

Query: 61  QNAHKLERTLAKKSREIRAYRGDNYDHNNNIMMNNSSHLWNVDTITTTTTTTPHRLFIGP 120
           QNAHKLERTLAKK+REIRAYRG   DH  NI M NS+HLW V+TIT         L IGP
Sbjct: 61  QNAHKLERTLAKKNREIRAYRG---DHETNITM-NSTHLWKVETITAAAP-----LVIGP 120

Query: 121 RGL----------PTDHH----HHHHQDDHDDIGHLDLSLRL 149
            G+            +HH    HHHHQ   DDIGHLDLSLRL
Sbjct: 121 HGVDGGREIRGFAAENHHLPHLHHHHQ---DDIGHLDLSLRL 145

[Close]

BLAST of Clc06G14270 vs. ExPASy TrEMBL
Match: A0A6J1BYT1 (protein LATE FLOWERING OS=Momordica charantia OX=3673 GN=LOC111006983 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 4.7e-26
Identity = 87/156 (55.77%), Postives = 101/156 (64.74%), Query Frame = 0


Query: 1   MEFKRHQQLNLELLLEPSSSSSNLSA-----LPLSPNCEAAATARVFSCNYCKRKFYSSQ 60
           MEFK H QLNLEL+LEPSS S + S+     +  +PNC+    ARVFSCNYCKRKFYSSQ
Sbjct: 1   MEFK-HSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCD-DDQARVFSCNYCKRKFYSSQ 60

Query: 61  ALGGHQNAHKLERTLAKKSREIR--AYRGD-NYDHNNNIMMNNSSHLWNVDTITTTTTTT 120
           ALGGHQNAHKLERTLAKKSREIR  AY GD + + N N+MMNNS+HLW ++T  T     
Sbjct: 61  ALGGHQNAHKLERTLAKKSREIRGGAYAGDESCNMNMNMMMNNSNHLWKIETPPTVIGLC 120

Query: 121 PHRLFIGPRGLPTDHHHHHHQDDHDDIGHLDLSLRL 149
           P     G          H  +    +   LDLSLRL
Sbjct: 121 PR----GGHDAAASGRDHQMRACRPENQDLDLSLRL 150

[Close]

BLAST of Clc06G14270 vs. ExPASy TrEMBL
Match: A0A5N5J902 (C2H2-type domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_028310 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 6.1e-18
Identity = 62/94 (65.96%), Postives = 70/94 (74.47%), Query Frame = 0


Query: 8   QLNLELLLEPSSSSSNLSALPLSPNCEAAATARVFSCNYCKRKFYSSQALGGHQNAHKLE 67
           QLNLEL+LEPSSSSS  S+ P SP     A  RVFSCNYC+RKFYSSQALGGHQNAHKLE
Sbjct: 17  QLNLELVLEPSSSSS--SSSPHSP-----AEPRVFSCNYCQRKFYSSQALGGHQNAHKLE 76

Query: 68  RTLAKKSRE----IRAYRGDNYDHNNNIMMNNSS 98
           RTLAKKSRE    +RA+ G N    ++  M+ SS
Sbjct: 77  RTLAKKSREMSSSVRAHGGSNARSGSSSCMSGSS 103

[Close]

BLAST of Clc06G14270 vs. TAIR 10
Match: AT5G57520.1 (zinc finger protein 2 )

HSP 1 Score: 97.4 bits (241), Expect = 1.0e-20
Identity = 56/82 (68.29%), Postives = 64/82 (78.05%), Query Frame = 0


Query: 3  FKRHQQLNLELLLEPSSSSSNLSALPLSPNCEAAATARVFSCNYCKRKFYSSQALGGHQN 62
          +K H QLNLEL+LEPSS SS+ S+   S +C      RVFSCNYC+RKFYSSQALGGHQN
Sbjct: 16 YKNH-QLNLELVLEPSSMSSSSSSSTNSSSC--LEQPRVFSCNYCQRKFYSSQALGGHQN 75

Query: 63 AHKLERTLAKKSREIRAYRGDN 85
          AHKLERTLAKKSRE+  +R  N
Sbjct: 76 AHKLERTLAKKSREL--FRSSN 92

[Close]

BLAST of Clc06G14270 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 72.4 bits (176), Expect = 3.4e-13
Identity = 41/78 (52.56%), Postives = 51/78 (65.38%), Query Frame = 0


Query: 1   MEFKRHQQLNLEL----LLEPSSSSSNLSALPLSPNCEAAATARVFSCNYCKRKFYSSQA 60
           + F  +   NL+L    L  P SS+S  S        + + + RVFSCNYC+RKFYSSQA
Sbjct: 40  LSFNNNNNNNLDLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQA 99

Query: 61  LGGHQNAHKLERTLAKKS 75
           LGGHQNAHK ERTLAK++
Sbjct: 100 LGGHQNAHKRERTLAKRA 117

[Close]

BLAST of Clc06G14270 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 70.1 bits (170), Expect = 1.7e-12
Identity = 39/70 (55.71%), Postives = 47/70 (67.14%), Query Frame = 0


Query: 30  SPNCEAAATARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRAYRGDNYDHNN 89
           S  CE  A  RVFSCNYC+RKFYSSQALGGHQNAHK ERT+AK++     + G  + H++
Sbjct: 49  STKCE--ANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRA----MHMGRMFGHHH 108

Query: 90  NIMMNNSSHL 100
                 SS L
Sbjct: 109 RPYTYTSSSL 112

[Close]

BLAST of Clc06G14270 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 70.1 bits (170), Expect = 1.7e-12
Identity = 39/64 (60.94%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 12  ELLLEPSSSSSNLSALPLSPNCEAAATARVFSCNYCKRKFYSSQALGGHQNAHKLERTLA 71
           EL L  S  +S+ S        E  A  RVFSCNYC+RKFYSSQALGGHQNAHK ERTLA
Sbjct: 38  ELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA 97

Query: 72  KKSR 76
           K+ +
Sbjct: 98  KRGQ 101

[Close]

BLAST of Clc06G14270 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 1.2e-10
Identity = 36/72 (50.00%), Postives = 46/72 (63.89%), Query Frame = 0


Query: 6   HQQLNLELLLEPSSSSSNLSALPLSPNCEAAATARVFSCNYCKRKFYSSQALGGHQNAHK 65
           +Q+LNL   LE          +  S N   +   ++FSCNYC+R FYSSQALGGHQNAHK
Sbjct: 75  NQELNLLDCLE-------TGVVTPSFNGSTSTEQKLFSCNYCQRTFYSSQALGGHQNAHK 134

Query: 66  LERTLAKKSREI 78
            ERTLAK+ + +
Sbjct: 135 RERTLAKRGQRM 139

The following BLAST results are available for this feature:

BLAST of Clc06G14270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880343.1	4.0e-56	81.94	zinc finger protein 3 [Benincasa hispida]	[more]
XP_023516743.1	3.4e-39	66.23	zinc finger protein 7-like [Cucurbita pepo subsp. pepo] >XP_023521837.1 zinc fin...	[more]
KAG6589714.1	4.5e-39	67.11	Zinc finger protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG70233...	[more]
XP_004146361.1	9.9e-39	64.91	zinc finger protein 7 [Cucumis sativus]	[more]
XP_022921390.1	1.7e-38	66.45	zinc finger protein 7 [Cucurbita moschata]	[more]

BLAST of Clc06G14270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39261	1.4e-19	68.29	Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1	[more]
Q39263	4.8e-12	52.56	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q42485	2.4e-11	60.94	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
Q39266	2.4e-11	55.71	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q39262	1.9e-08	36.44	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]

BLAST of Clc06G14270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E5I0	8.2e-39	66.45	zinc finger protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111429682 PE=4 SV=1	[more]
A0A6J1JAI3	4.1e-38	66.45	zinc finger protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111485036 PE=4 SV=1	[more]
A0A6J1KNT5	1.6e-34	61.11	zinc finger protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111497321 PE=4 SV=1	[more]
A0A6J1BYT1	4.7e-26	55.77	protein LATE FLOWERING OS=Momordica charantia OX=3673 GN=LOC111006983 PE=4 SV=1	[more]
A0A5N5J902	6.1e-18	65.96	C2H2-type domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_02831...	[more]

BLAST of Clc06G14270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57520.1	1.0e-20	68.29	zinc finger protein 2	[more]
AT1G66140.1	3.4e-13	52.56	zinc finger protein 4	[more]
AT1G24625.1	1.7e-12	55.71	zinc finger protein 7	[more]
AT1G80730.1	1.7e-12	60.94	zinc-finger protein 1	[more]
AT5G10970.1	1.2e-10	50.00	C2H2 and C2HC zinc fingers superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 63..83
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 18..98 e-value: 5.6E-7 score: 31.3
None	No IPR available	PANTHER	PTHR45730	ZINC FINGER PROTEIN JAGGED	coord: 7..103
None	No IPR available	PANTHER	PTHR45730:SF9	ZINC FINGER PROTEIN 2	coord: 7..103
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 44..64
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 42..69 score: 11.073551
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 40..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G14270.1	Clc06G14270.1	mRNA