Clc06G13230 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G13230
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	AP2/ERF and B3 domain-containing transcription factor
Location	ClcChr06: 24145859 .. 24147866 (+)
RNA-Seq Expression	Clc06G13230
Synteny	Clc06G13230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAATCTCCGAGGCGGGTTGAGTTTTGGAACAGTTGAAGTATATACTCACTCTTCATGCGGTGCTTTGTGATTTTGGAAACTAAAAAGCCACACAAGCAAGTGTTTGTAGGTTGGTTCGGTTAGAAGATCTTTTTTTCTTTTGTTTACTTCAACAATTGGGTTACAGCTTTGCTTAATCTGATGAACCATTGTTAGATGATGGACCCAATTCAAGTTGCAATTTTGTTGAACTCAAGAACTACTCTCAAAAGTCATCTCAAGCTTACTCTTCTCGATACTCTTATGTTGATAGATAATGATAAGCAAACTTTTCTCACGACTCTTTCCTATGATGGCATGGTGGATAAGATCGTATGGAAGGATTCGTTAATATGATGGGTTTATTTGTTCCTATTAGCTATATGTATGGTCTTATACTTCACCGGGAATGAGATCTTGTATCTGCCCCTTTCTTTTCAGTGTAGTAACTTACTAATTCGTTTAATCAATTGGTGGAGGTTTATACTTTGATGAACACATTGCATGACATTAGACAATTTTATAATTAGTAACTGTTCACAAAATCTAATCCTCCATCTTTTTGGTTGGTCTTTTCTCAGAACCATCATGAAACAGGAGTTGTCAAGTACGATTTCAAAAACCAGGGTGAATGCAATTGGAGAAGCTTTAGATTCAAGCTGTATCACTTGTCCATCTCCTGCTAATGGATGTAGTAGACAAGGAAGGAGTTTAACCTCAAAATTCAAAGGTGTCGTGCCTCAGCAGAATGGCCACTGGGGTGCTCAAATTTACGCTAATCACCAGCGTATTTGGCTTGGGACATTCAAGTCGGAAAATGAGGCAGCCATGGCTTATGATAGTGCAGCTATCAGAATCAGAAGTGGAGATTGTCATAGAAACTTTCCTTGGACCAAATTCACTATTGAAGAGCCAAACTTTCAGAAACTTTACACTACAGAAGCTTTGCTTAATATGTTAAAGGACGGTTCTTACCGTACCAAATTTGCCGAGTATTTGAGGGATTGTTCTGAAAGTGCACAAACATCAGCCAGTCCCTCGTCAGAAAAGGTGCATAACAATGGAGGGACATCTATTAAGCAACTTTTTCAAAAGGAGCTAACACCAAGCGATGTTGGTAAGTTGAACAGATTGGTCATCCCAAAGAAGTACGCCGTTAAATACTTCCCTCACATATCAGCTAGTGCAATGGAAAATGTGGAACATGCAGATGATGATCGTGACGTGCAGCTAGTATTTTTTGACAAAATGCTGAGACAATGGAAATTTCGATACTGTTACTGGAAAAGCAGCCAGAGCTATGTTTTTACGCGAGGTTGGAATCGTTTTGTGAAGGAAAAACAACTGAAAGCTAATGATACCATAGCTTTCTACTTGTGTGAAGCAGCAAAGGCAAGCGATTCTACAACTACATTCTGTGTGGTGGATGTTAAAAACCGTGACAACGGTGGTAGCTTGGTTGAGAATGAAACCACATGCAGTGAATTGCAGCTCGATTTGAGGCTGGAAGAAGTTGATGAATCGGTGTCACCTACGCACGTAGACGATGAATTAAAAGATGATCACGAAGTTAAGGGCTTCAAACTGTTTGGAGTGCATATTAAGTGAAAGTAAGTTTTGCTAATTCCTTTCTCCTTCCATCATTCCTTTTCCATTTTTAGTAGTATACCTTAAAAAAAGTTCATTTAAGGTATGCTTGGTAGATTCTTTATGGAACAATGCTAAAGATCATTTACACTCTAGTGTGGTAATATATACCCACTATTAGGAGAAATTATTAGAATTGATCAATTGCGCTACTGTGTAGTTTTCACCCTCTTAAATTTTTTTTTTTTAATTTTTAAATTTTTTTTATGTAATAGCAAATGTAGTAGTAGATTTAAACCTCGGACTTCAAGTGAGCAAAGTATTTAATTGATTCAATATGTTAAACCAGTTTAAATCAACCCAATAAAATGACATGCTATTTGTTGGTTTGAGGAGT

mRNA sequence

AAAAAAAAATCTCCGAGGCGGGTTGAGTTTTGGAACAGTTGAAGTATATACTCACTCTTCATGCGGTGCTTTGTGATTTTGGAAACTAAAAAGCCACACAAGCAAGTGTTTGTAGGTTGGTTCGGTTAGAAGATCTTTTTTTCTTTTGTTTACTTCAACAATTGGGTTACAGCTTTGCTTAATCTGATGAACCATTGTTAGATGATGGACCCAATTCAAGTTGCAATTTTGTTGAACTCAAGAACTACTCTCAAAAGTCATCTCAAGCTTACTCTTCTCGATACTCTTATGTTGATAGATAATGATAAGCAAACTTTTCTCACGACTCTTTCCTATGATGGCATGGTGGATAAGATCGTATGGAAGGATTCGTTAATATGATGGGTTTATTTGTTCCTATTAGCTATATGTATGGTCTTATACTTCACCGGGAATGAGATCTTGTATCTGCCCCTTTCTTTTCAGTGTAGTAACTTACTAATTCGTTTAATCAATTGGTGGAGGTTTATACTTTGATGAACACATTGCATGACATTAGACAATTTTATAATTAGTAACTGTTCACAAAATCTAATCCTCCATCTTTTTGGTTGGTCTTTTCTCAGAACCATCATGAAACAGGAGTTGTCAAGTACGATTTCAAAAACCAGGGTGAATGCAATTGGAGAAGCTTTAGATTCAAGCTGTATCACTTGTCCATCTCCTGCTAATGGATGTAGTAGACAAGGAAGGAGTTTAACCTCAAAATTCAAAGGTGTCGTGCCTCAGCAGAATGGCCACTGGGGTGCTCAAATTTACGCTAATCACCAGCGTATTTGGCTTGGGACATTCAAGTCGGAAAATGAGGCAGCCATGGCTTATGATAGTGCAGCTATCAGAATCAGAAGTGGAGATTGTCATAGAAACTTTCCTTGGACCAAATTCACTATTGAAGAGCCAAACTTTCAGAAACTTTACACTACAGAAGCTTTGCTTAATATGTTAAAGGACGGTTCTTACCGTACCAAATTTGCCGAGTATTTGAGGGATTGTTCTGAAAGTGCACAAACATCAGCCAGTCCCTCGTCAGAAAAGGTGCATAACAATGGAGGGACATCTATTAAGCAACTTTTTCAAAAGGAGCTAACACCAAGCGATGTTGGTAAGTTGAACAGATTGGTCATCCCAAAGAAGTACGCCGTTAAATACTTCCCTCACATATCAGCTAGTGCAATGGAAAATGTGGAACATGCAGATGATGATCGTGACGTGCAGCTAGTATTTTTTGACAAAATGCTGAGACAATGGAAATTTCGATACTGTTACTGGAAAAGCAGCCAGAGCTATGTTTTTACGCGAGGTTGGAATCGTTTTGTGAAGGAAAAACAACTGAAAGCTAATGATACCATAGCTTTCTACTTGTGTGAAGCAGCAAAGGCAAGCGATTCTACAACTACATTCTGTGTGGTGGATGTTAAAAACCGTGACAACGGTGGTAGCTTGGTTGAGAATGAAACCACATGCAGTGAATTGCAGCTCGATTTGAGGCTGGAAGAAGTTGATGAATCGGTGTCACCTACGCACGTAGACGATGAATTAAAAGATGATCACGAAGTTAAGGGCTTCAAACTGTTTGGAGTGCATATTAAGTGAAAGTAAGTTTTGCTAATTCCTTTCTCCTTCCATCATTCCTTTTCCATTTTTAGTAGTATACCTTAAAAAAAGTTCATTTAAGGTATGCTTGGTAGATTCTTTATGGAACAATGCTAAAGATCATTTACACTCTAGTGTGGTAATATATACCCACTATTAGGAGAAATTATTAGAATTGATCAATTGCGCTACTGTGTAGTTTTCACCCTCTTAAATTTTTTTTTTTTAATTTTTAAATTTTTTTTATGTAATAGCAAATGTAGTAGTAGATTTAAACCTCGGACTTCAAGTGAGCAAAGTATTTAATTGATTCAATATGTTAAACCAGTTTAAATCAACCCAATAAAATGACATGCTATTTGTTGGTTTGAGGAGT

Coding sequence (CDS)

ATGACATTAGACAATTTTATAATTAGTAACTGTTCACAAAATCTAATCCTCCATCTTTTTGGTTGGTCTTTTCTCAGAACCATCATGAAACAGGAGTTGTCAAGTACGATTTCAAAAACCAGGGTGAATGCAATTGGAGAAGCTTTAGATTCAAGCTGTATCACTTGTCCATCTCCTGCTAATGGATGTAGTAGACAAGGAAGGAGTTTAACCTCAAAATTCAAAGGTGTCGTGCCTCAGCAGAATGGCCACTGGGGTGCTCAAATTTACGCTAATCACCAGCGTATTTGGCTTGGGACATTCAAGTCGGAAAATGAGGCAGCCATGGCTTATGATAGTGCAGCTATCAGAATCAGAAGTGGAGATTGTCATAGAAACTTTCCTTGGACCAAATTCACTATTGAAGAGCCAAACTTTCAGAAACTTTACACTACAGAAGCTTTGCTTAATATGTTAAAGGACGGTTCTTACCGTACCAAATTTGCCGAGTATTTGAGGGATTGTTCTGAAAGTGCACAAACATCAGCCAGTCCCTCGTCAGAAAAGGTGCATAACAATGGAGGGACATCTATTAAGCAACTTTTTCAAAAGGAGCTAACACCAAGCGATGTTGGTAAGTTGAACAGATTGGTCATCCCAAAGAAGTACGCCGTTAAATACTTCCCTCACATATCAGCTAGTGCAATGGAAAATGTGGAACATGCAGATGATGATCGTGACGTGCAGCTAGTATTTTTTGACAAAATGCTGAGACAATGGAAATTTCGATACTGTTACTGGAAAAGCAGCCAGAGCTATGTTTTTACGCGAGGTTGGAATCGTTTTGTGAAGGAAAAACAACTGAAAGCTAATGATACCATAGCTTTCTACTTGTGTGAAGCAGCAAAGGCAAGCGATTCTACAACTACATTCTGTGTGGTGGATGTTAAAAACCGTGACAACGGTGGTAGCTTGGTTGAGAATGAAACCACATGCAGTGAATTGCAGCTCGATTTGAGGCTGGAAGAAGTTGATGAATCGGTGTCACCTACGCACGTAGACGATGAATTAAAAGATGATCACGAAGTTAAGGGCTTCAAACTGTTTGGAGTGCATATTAAGTGA

Protein sequence

MTLDNFIISNCSQNLILHLFGWSFLRTIMKQELSSTISKTRVNAIGEALDSSCITCPSPANGCSRQGRSLTSKFKGVVPQQNGHWGAQIYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDCHRNFPWTKFTIEEPNFQKLYTTEALLNMLKDGSYRTKFAEYLRDCSESAQTSASPSSEKVHNNGGTSIKQLFQKELTPSDVGKLNRLVIPKKYAVKYFPHISASAMENVEHADDDRDVQLVFFDKMLRQWKFRYCYWKSSQSYVFTRGWNRFVKEKQLKANDTIAFYLCEAAKASDSTTTFCVVDVKNRDNGGSLVENETTCSELQLDLRLEEVDESVSPTHVDDELKDDHEVKGFKLFGVHIK

Homology

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BLAST of Clc06G13230 vs. NCBI nr
Match: XP_031744995.1 (AP2/ERF and B3 domain-containing transcription factor At1g50680 isoform X1 [Cucumis sativus])

HSP 1 Score: 630.9 bits (1626), Expect = 6.7e-177
Identity = 305/343 (88.92%), Postives = 319/343 (93.00%), Query Frame = 0


Query: 25  LRTIMKQELSSTISKTRVNAIGEALDSSCITCPSPANGCSRQGRSLTSKFKGVVPQQNGH 84
           +RT MKQE SS ISK + NA+GE LDSSCITCP P NGCSRQGRSLTSKFKGVVPQQNGH
Sbjct: 1   MRTAMKQEFSSMISKAKTNAVGETLDSSCITCPLPINGCSRQGRSLTSKFKGVVPQQNGH 60

Query: 85  WGAQIYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDCHRNFPWTKFTIEEPNFQKLYT 144
           WGAQIYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDCHRNFPWTK TIEEPNFQKLYT
Sbjct: 61  WGAQIYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDCHRNFPWTKVTIEEPNFQKLYT 120

Query: 145 TEALLNMLKDGSYRTKFAEYLRDCSESAQTSASPSSEKVHNNGGTSIKQLFQKELTPSDV 204
           TE LLNM+KDGSYRTKF+EYLRD SES QTSASPS+EK HNNGGTSIKQLFQKELTPSDV
Sbjct: 121 TETLLNMIKDGSYRTKFSEYLRDRSESTQTSASPSTEKAHNNGGTSIKQLFQKELTPSDV 180

Query: 205 GKLNRLVIPKKYAVKYFPHISASAMENVEHADDDRDVQLVFFDKMLRQWKFRYCYWKSSQ 264
           GKLNRLVIPKKYAVKYFP ISAS  ENVEH DDDRD+QL+FFDKM+RQWKFRYCYWKSSQ
Sbjct: 181 GKLNRLVIPKKYAVKYFPRISASTTENVEHVDDDRDLQLLFFDKMMRQWKFRYCYWKSSQ 240

Query: 265 SYVFTRGWNRFVKEKQLKANDTIAFYLCEAAKASDSTTTFCVVDVKNRDNGGSLVENETT 324
           SYVFTRGWNRFVKEKQLKANDTIAFYLCEAAK+SDS TTFCVVDVKNRDN G LVENETT
Sbjct: 241 SYVFTRGWNRFVKEKQLKANDTIAFYLCEAAKSSDSKTTFCVVDVKNRDNSGGLVENETT 300

Query: 325 CSELQLDLRLEEVDESVSPTHVDDELKDDHEVKGFKLFGVHIK 368
           CSELQL+LR  EV+ESVSP H+DDELKD+ EVKGFKLFGVHIK
Sbjct: 301 CSELQLNLRHGEVEESVSPKHIDDELKDEREVKGFKLFGVHIK 343

[Close]

BLAST of Clc06G13230 vs. NCBI nr
Match: XP_004146691.1 (AP2/ERF and B3 domain-containing transcription factor At1g50680 isoform X2 [Cucumis sativus] >XP_031744998.1 AP2/ERF and B3 domain-containing transcription factor At1g50680 isoform X2 [Cucumis sativus] >KGN65245.1 hypothetical protein Csa_019729 [Cucumis sativus])

HSP 1 Score: 626.7 bits (1615), Expect = 1.3e-175
Identity = 303/339 (89.38%), Postives = 316/339 (93.22%), Query Frame = 0


Query: 29  MKQELSSTISKTRVNAIGEALDSSCITCPSPANGCSRQGRSLTSKFKGVVPQQNGHWGAQ 88
           MKQE SS ISK + NA+GE LDSSCITCP P NGCSRQGRSLTSKFKGVVPQQNGHWGAQ
Sbjct: 1   MKQEFSSMISKAKTNAVGETLDSSCITCPLPINGCSRQGRSLTSKFKGVVPQQNGHWGAQ 60

Query: 89  IYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDCHRNFPWTKFTIEEPNFQKLYTTEAL 148
           IYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDCHRNFPWTK TIEEPNFQKLYTTE L
Sbjct: 61  IYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDCHRNFPWTKVTIEEPNFQKLYTTETL 120

Query: 149 LNMLKDGSYRTKFAEYLRDCSESAQTSASPSSEKVHNNGGTSIKQLFQKELTPSDVGKLN 208
           LNM+KDGSYRTKF+EYLRD SES QTSASPS+EK HNNGGTSIKQLFQKELTPSDVGKLN
Sbjct: 121 LNMIKDGSYRTKFSEYLRDRSESTQTSASPSTEKAHNNGGTSIKQLFQKELTPSDVGKLN 180

Query: 209 RLVIPKKYAVKYFPHISASAMENVEHADDDRDVQLVFFDKMLRQWKFRYCYWKSSQSYVF 268
           RLVIPKKYAVKYFP ISAS  ENVEH DDDRD+QL+FFDKM+RQWKFRYCYWKSSQSYVF
Sbjct: 181 RLVIPKKYAVKYFPRISASTTENVEHVDDDRDLQLLFFDKMMRQWKFRYCYWKSSQSYVF 240

Query: 269 TRGWNRFVKEKQLKANDTIAFYLCEAAKASDSTTTFCVVDVKNRDNGGSLVENETTCSEL 328
           TRGWNRFVKEKQLKANDTIAFYLCEAAK+SDS TTFCVVDVKNRDN G LVENETTCSEL
Sbjct: 241 TRGWNRFVKEKQLKANDTIAFYLCEAAKSSDSKTTFCVVDVKNRDNSGGLVENETTCSEL 300

Query: 329 QLDLRLEEVDESVSPTHVDDELKDDHEVKGFKLFGVHIK 368
           QL+LR  EV+ESVSP H+DDELKD+ EVKGFKLFGVHIK
Sbjct: 301 QLNLRHGEVEESVSPKHIDDELKDEREVKGFKLFGVHIK 339

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BLAST of Clc06G13230 vs. NCBI nr
Match: XP_008443869.1 (PREDICTED: AP2/ERF and B3 domain-containing transcription factor At1g50680-like [Cucumis melo] >KAA0035061.1 AP2/ERF and B3 domain-containing transcription factor [Cucumis melo var. makuwa] >TYK03617.1 AP2/ERF and B3 domain-containing transcription factor [Cucumis melo var. makuwa])

HSP 1 Score: 622.9 bits (1605), Expect = 1.8e-174
Identity = 303/339 (89.38%), Postives = 315/339 (92.92%), Query Frame = 0


Query: 29  MKQELSSTISKTRVNAIGEALDSSCITCPSPANGCSRQGRSLTSKFKGVVPQQNGHWGAQ 88
           MKQELSS ISK R NA+G+ LDSSCITCP P NGCSRQGRSLTSKFKGVVPQQNGHWGAQ
Sbjct: 1   MKQELSSMISKARTNAVGDTLDSSCITCPLPTNGCSRQGRSLTSKFKGVVPQQNGHWGAQ 60

Query: 89  IYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDCHRNFPWTKFTIEEPNFQKLYTTEAL 148
           IYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDCHRNFPWTKFTIEEPNFQKLYTTE L
Sbjct: 61  IYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDCHRNFPWTKFTIEEPNFQKLYTTETL 120

Query: 149 LNMLKDGSYRTKFAEYLRDCSESAQTSASPSSEKVHNNGGTSIKQLFQKELTPSDVGKLN 208
           LNM+KDGSYRTKF+EYLRDCSES QTS SPS+EK HNNGGTSIKQLFQKELTPSDVGKLN
Sbjct: 121 LNMIKDGSYRTKFSEYLRDCSESTQTSVSPSTEKAHNNGGTSIKQLFQKELTPSDVGKLN 180

Query: 209 RLVIPKKYAVKYFPHISASAMENVEHADDDRDVQLVFFDKMLRQWKFRYCYWKSSQSYVF 268
           RLVIPKKYAVKYFP ISAS  ENVE  DDDRDVQLVFFDKM+RQWKFRYCYWKSSQSYVF
Sbjct: 181 RLVIPKKYAVKYFPQISASTTENVEPVDDDRDVQLVFFDKMMRQWKFRYCYWKSSQSYVF 240

Query: 269 TRGWNRFVKEKQLKANDTIAFYLCEAAKASDSTTTFCVVDVKNRDNGGSLVENETTCSEL 328
           TRGWNRFVKEKQLKANDTIAFYLCEAA +SDS TTFCVVDV NRDN G LVENETTCSEL
Sbjct: 241 TRGWNRFVKEKQLKANDTIAFYLCEAA-SSDSKTTFCVVDVNNRDNSGGLVENETTCSEL 300

Query: 329 QLDLRLEEVDESVSPTHVDDELKDDHEVKGFKLFGVHIK 368
           QL+LR  EV+ESVSP H+D+ELKD+ EVKGFKLFGVHIK
Sbjct: 301 QLNLRHGEVEESVSPKHIDNELKDEREVKGFKLFGVHIK 338

[Close]

BLAST of Clc06G13230 vs. NCBI nr
Match: XP_038879014.1 (AP2/ERF and B3 domain-containing transcription factor At1g50680-like [Benincasa hispida] >XP_038879015.1 AP2/ERF and B3 domain-containing transcription factor At1g50680-like [Benincasa hispida] >XP_038879016.1 AP2/ERF and B3 domain-containing transcription factor At1g50680-like [Benincasa hispida] >XP_038879017.1 AP2/ERF and B3 domain-containing transcription factor At1g50680-like [Benincasa hispida] >XP_038879018.1 AP2/ERF and B3 domain-containing transcription factor At1g50680-like [Benincasa hispida])

HSP 1 Score: 610.1 bits (1572), Expect = 1.2e-170
Identity = 303/340 (89.12%), Postives = 315/340 (92.65%), Query Frame = 0


Query: 29  MKQELSSTISKTRVNAIGEALDSSCITCPSPANGCSRQGRSLTSKFKGVVPQQNGHWGAQ 88
           MKQELSSTISK+R NAIGEALDSSC+T P PANG SRQGRSLTSKFKG+VPQQNGHWGAQ
Sbjct: 1   MKQELSSTISKSRENAIGEALDSSCVTHPFPANGNSRQGRSLTSKFKGIVPQQNGHWGAQ 60

Query: 89  IYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDCHRNFPWTKFTIEEPNFQKLYTTEAL 148
           IYANHQRIWLGTFKSENEAAMAYDSAAIRIR GDCHRNFPWTKFTIEEPNFQKLYTTEAL
Sbjct: 61  IYANHQRIWLGTFKSENEAAMAYDSAAIRIRRGDCHRNFPWTKFTIEEPNFQKLYTTEAL 120

Query: 149 LNMLKDGSYRTKFAEYLRDCSESAQTSASPSSEKVHNNGGTSIKQLFQKELTPSDVGKLN 208
           LNMLKDGSYRTKFAEYLR+CSESAQ SASPS+EK H NGGTSIKQLFQKELTPSDVGKLN
Sbjct: 121 LNMLKDGSYRTKFAEYLRECSESAQMSASPSAEKAHKNGGTSIKQLFQKELTPSDVGKLN 180

Query: 209 RLVIPKKYAVKYFPHISASAMENVEHADDDRDVQLVFFDKMLRQWKFRYCYWKSSQSYVF 268
           RLVIPKKYAVKYFPHISASA+EN E  +DD  VQLVFFDKM+R WKFRYCYWKSSQSYVF
Sbjct: 181 RLVIPKKYAVKYFPHISASAIENEEGGNDDCGVQLVFFDKMMRLWKFRYCYWKSSQSYVF 240

Query: 269 TRGWNRFVKEKQLKANDTIAFYLCEAAKASDSTTTFCVVDVKNR-DNGGSLVENETTCSE 328
           TRGWNRFVKEK+LK NDTIAFYLCEA KASDS TTFCVVDVKNR DNG  LVENETTCS 
Sbjct: 241 TRGWNRFVKEKELKPNDTIAFYLCEAVKASDSKTTFCVVDVKNRDDNGDILVENETTCST 300

Query: 329 LQLDLRLEEVDESVSPTHVDDELKDDHEVKGFKLFGVHIK 368
           LQLDLR EEV+E VSP HVDDE++DD EVKGFKLFGVHIK
Sbjct: 301 LQLDLRHEEVEELVSPKHVDDEVEDDSEVKGFKLFGVHIK 340

[Close]

BLAST of Clc06G13230 vs. NCBI nr
Match: KAG7023453.1 (AP2/ERF and B3 domain-containing transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 584.3 bits (1505), Expect = 7.2e-163
Identity = 292/339 (86.14%), Postives = 305/339 (89.97%), Query Frame = 0


Query: 29  MKQELSSTISKTRVNAIGEALDSSCITCPSPANGCSRQGRSLTSKFKGVVPQQNGHWGAQ 88
           MKQE SS I K R NAIGE     CITCP PA+GCSRQGRSLTSKFKGVV QQNGHWGAQ
Sbjct: 1   MKQEFSSMILKARTNAIGE----DCITCPFPASGCSRQGRSLTSKFKGVVLQQNGHWGAQ 60

Query: 89  IYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDCHRNFPWTKFTIEEPNFQKLYTTEAL 148
           IYANH RIWLG+FKSE+EAAMAYDSAAIRIRSGDCHRNFPWTKFTIEEPNFQ LYTTE L
Sbjct: 61  IYANHHRIWLGSFKSEDEAAMAYDSAAIRIRSGDCHRNFPWTKFTIEEPNFQNLYTTETL 120

Query: 149 LNMLKDGSYRTKFAEYLRDCSESAQTSASPSSEKVHNNGGTSIKQLFQKELTPSDVGKLN 208
           L+MLKDGSYRTKFAEYLRDC ESAQT ASPS+EK+HNNG TSIKQLFQKELTPSDVGKLN
Sbjct: 121 LSMLKDGSYRTKFAEYLRDCLESAQT-ASPSAEKLHNNGRTSIKQLFQKELTPSDVGKLN 180

Query: 209 RLVIPKKYAVKYFPHISASAMENVEHADDDRDVQLVFFDKMLRQWKFRYCYWKSSQSYVF 268
           RLVIPKKYAVKYFPHI AS ++NV+ ADDD DVQLVFFDKM+RQWKFRYCYWKSSQSYVF
Sbjct: 181 RLVIPKKYAVKYFPHIPASTIDNVKPADDDCDVQLVFFDKMMRQWKFRYCYWKSSQSYVF 240

Query: 269 TRGWNRFVKEKQLKANDTIAFYLCEAAKASDSTTTFCVVDVKNRDNGGSLVENETTCSEL 328
           TRGWNRFVKEKQLKANDTIAFYLCEAAKASD+ TTFCVVDVKNRDN GSL ENE T SE+
Sbjct: 241 TRGWNRFVKEKQLKANDTIAFYLCEAAKASDANTTFCVVDVKNRDNHGSLTENEITISEM 300

Query: 329 QLDLRLEEVDESVSPTHVDDELKDDHEVKGFKLFGVHIK 368
           QLDL  EE + SVSP HVDDELKDD EV GFKLFGVHIK
Sbjct: 301 QLDLSHEEGNGSVSPKHVDDELKDDLEVSGFKLFGVHIK 334

[Close]

BLAST of Clc06G13230 vs. ExPASy Swiss-Prot
Match: Q9C688 (AP2/ERF and B3 domain-containing transcription factor At1g51120 OS=Arabidopsis thaliana OX=3702 GN=At1g51120 PE=2 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 2.6e-83
Identity = 166/325 (51.08%), Postives = 216/325 (66.46%), Query Frame = 0


Query: 57  PSPANGCSRQGRSLTSKFKGVVPQQNGHWGAQIYANHQRIWLGTFKSENEAAMAYDSAAI 116
           P+     ++   S T+KFKGVV QQNGHWGAQIYA+H+RIWLGTFKS +EAA AYDSA+I
Sbjct: 30  PTEVTTTTKPALSNTTKFKGVVQQQNGHWGAQIYADHRRIWLGTFKSAHEAAAAYDSASI 89

Query: 117 RIRSGDC--HRNFPWTKFTIEEPNFQKLYTTEALLNMLKDGSYRTKFAEYLRDCSESAQT 176
           ++RS D   HRNFPW+ FT+ EP+FQ+ YTTEA+LNM++DGSY+ KF ++LR  S+    
Sbjct: 90  KLRSFDANSHRNFPWSDFTLHEPDFQECYTTEAVLNMIRDGSYQHKFRDFLRIRSQIVAN 149

Query: 177 SASPSSEKV--------HNNGGTSIKQLFQKELTPSDVGKLNRLVIPKKYAVKYFPHISA 236
                S++V         +N   S  QLFQKELTPSDVGKLNRLVIPKKYAVKY P IS 
Sbjct: 150 INIVGSKQVLGGGEGGQESNKCFSCTQLFQKELTPSDVGKLNRLVIPKKYAVKYMPFISD 209

Query: 237 SAMENVEHADDDRDVQLVFFDKMLRQWKFRYCYWKSSQSYVFTRGWNRFVKEKQLKANDT 296
              E  E ++   DV++VF+D+ +RQWKFRYCYW+SSQS+VFTRGWN FVKEK LK  D 
Sbjct: 210 DQSEK-ETSEGVEDVEVVFYDRAMRQWKFRYCYWRSSQSFVFTRGWNGFVKEKNLKEKDI 269

Query: 297 IAFYLCEAAK----ASDSTTTFCVVDVKNRDNGGSLVENETTCSELQLDLRLEEVDESVS 356
           I FY C+           + TF ++DV +    G +V  E   +  ++    E   E++ 
Sbjct: 270 IVFYTCDVPNNVKTLEGQSKTFLMIDVHHFSGNGFVVPEEVNKTVHEISDE-EMKTETLF 329

Query: 357 PTHVDDELKDDHEVKGFKLFGVHIK 368
            + V++E K + +  GF LFGV I+
Sbjct: 330 TSKVEEETKSEEKKGGFMLFGVRIQ 352

[Close]

BLAST of Clc06G13230 vs. ExPASy Swiss-Prot
Match: Q9C6P5 (AP2/ERF and B3 domain-containing transcription factor At1g50680 OS=Arabidopsis thaliana OX=3702 GN=At1g50680 PE=2 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 4.9e-82
Identity = 163/309 (52.75%), Postives = 205/309 (66.34%), Query Frame = 0


Query: 73  KFKGVVPQQNGHWGAQIYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDC--HRNFPWT 132
           K+KGVV QQNGHWGAQIYA+H+RIWLGTFKS +EAA AYDSA+I++RS D   HRNFPW+
Sbjct: 27  KYKGVVQQQNGHWGAQIYADHKRIWLGTFKSADEAATAYDSASIKLRSFDANSHRNFPWS 86

Query: 133 KFTIEEPNFQKLYTTEALLNMLKDGSYRTKFAEYLRDCSE--SAQTSASPSSEKVHNNGG 192
             T+ EP+FQ  YTTE +LNM++DGSY+ KF ++LR  S+  ++     P   +   N  
Sbjct: 87  TITLNEPDFQNCYTTETVLNMIRDGSYQHKFRDFLRIRSQIVASINIGGPKQARGEVNQE 146

Query: 193 T----SIKQLFQKELTPSDVGKLNRLVIPKKYAVKYFPHISA--SAMENVEHADDDRDVQ 252
           +    S  QLFQKELTPSDVGKLNRLVIPKKYAVKY P ISA  S  E  E      DV+
Sbjct: 147 SDKCFSCTQLFQKELTPSDVGKLNRLVIPKKYAVKYMPFISADQSEKEEGEIVGSVEDVE 206

Query: 253 LVFFDKMLRQWKFRYCYWKSSQSYVFTRGWNRFVKEKQLKANDTIAFYLCEAAK----AS 312
           +VF+D+ +RQWKFRYCYWKSSQS+VFTRGWN FVKEK LK  D IAFY C+         
Sbjct: 207 VVFYDRAMRQWKFRYCYWKSSQSFVFTRGWNSFVKEKNLKEKDVIAFYTCDVPNNVKTLE 266

Query: 313 DSTTTFCVVDVKNRDNGGSLVENETTCSELQLDLRLEEVDESVSPTHVDDELKDDHEVKG 368
                F ++DV    + GS+V  E + +     +++++ +  VS    D E K +    G
Sbjct: 267 GQRKNFLMIDVHCFSDNGSVVAEEVSMTVHDSSVQVKKTENLVSSMLEDKETKSEENKGG 326

[Close]

BLAST of Clc06G13230 vs. ExPASy Swiss-Prot
Match: Q9ZWM9 (AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thaliana OX=3702 GN=RAV1 PE=1 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 6.7e-47
Identity = 104/235 (44.26%), Postives = 141/235 (60.00%), Query Frame = 0


Query: 61  NGCSRQGRSL-TSKFKGVVPQQNGHWGAQIYANHQRIWLGTFKSENEAAMAYDSAAIRIR 120
           NG   + R L +SK+KGVVPQ NG WGAQIY  HQR+WLGTF  E+EAA AYD A  R R
Sbjct: 48  NGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAVHRFR 107

Query: 121 SGDCHRNFPWTKFTIEEPNFQKLYTTEALLNMLKDGSYRTKFAEYLRDCSESAQ-----T 180
             D   NF   K   +E +F   ++   +++ML+  +Y  +  +  R  + +        
Sbjct: 108 RRDAVTNFKDVKMDEDEVDFLNSHSKSEIVDMLRKHTYNEELEQSKRRRNGNGNMTRTLL 167

Query: 181 SASPSSEKVHNNGGTSIKQLFQKELTPSDVGKLNRLVIPKKYAVKYFPHISASAMENVEH 240
           ++  S++ V   G  S + LF+K +TPSDVGKLNRLVIPK +A K+FP  S++       
Sbjct: 168 TSGLSNDGVSTTGFRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNV------ 227

Query: 241 ADDDRDVQLVFFDKMLRQWKFRYCYWKSSQSYVFTRGWNRFVKEKQLKANDTIAF 290
               + V L F D   + W+FRY YW SSQSYV T+GW+RFVKEK L+A D ++F
Sbjct: 228 --SVKGVLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSF 274

[Close]

BLAST of Clc06G13230 vs. ExPASy Swiss-Prot
Match: Q9AWS0 (AP2/ERF and B3 domain-containing protein Os01g0141000 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0141000 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.6e-46
Identity = 110/270 (40.74%), Postives = 153/270 (56.67%), Query Frame = 0


Query: 59  PANGCSRQGRSLTSKFKGVVPQQNGHWGAQIYANHQRIWLGTFKSENEAAMAYDSAAIRI 118
           PA   ++Q    +S++KGVVPQ NG WGAQIY  H R+WLGTF  E  AA AYD AA+R 
Sbjct: 58  PAAAAAQQ----SSRYKGVVPQPNGRWGAQIYERHARVWLGTFPDEEAAARAYDVAALRY 117

Query: 119 RSGDCHRNFPWTKFTIEEPNFQKLYTTEALLNMLKDGSYRTKFAEYL-RDCSESAQTSAS 178
           R  D   NFP    +  E  F   ++   +++ML+  +Y  +  + L R     A+   +
Sbjct: 118 RGRDAATNFPGAAASAAELAFLAAHSKAEIVDMLRKHTYADELRQGLRRGRGMGARAQPT 177

Query: 179 PSSEKVHNNGGTSIKQLFQKELTPSDVGKLNRLVIPKKYAVKYFPHISASAMENVEHADD 238
           PS  +         + LF+K +TPSDVGKLNRLV+PK++A K+FP   A++ ++   A  
Sbjct: 178 PSWAR---------EPLFEKAVTPSDVGKLNRLVVPKQHAEKHFPLRRAASSDSASAAAT 237

Query: 239 DRDVQLVFFDKMLRQWKFRYCYWKSSQSYVFTRGWNRFVKEKQLKANDTIAFYL------ 298
            + V L F D   + W+FRY YW SSQSYV T+GW+RFV+EK L+A DTI F        
Sbjct: 238 GKGVLLNFEDGEGKVWRFRYSYWNSSQSYVLTKGWSRFVREKGLRAGDTIVFSRSAYGPD 297

Query: 299 ------CEAAKASDSTTTFCVVDVKNRDNG 316
                 C+   A+ +TTT C  D +   +G
Sbjct: 298 KLLFIDCKKNNAAAATTT-CAGDERPTTSG 313

[Close]

BLAST of Clc06G13230 vs. ExPASy Swiss-Prot
Match: Q9LS06 (AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thaliana OX=3702 GN=ARF14 PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.8e-45
Identity = 103/220 (46.82%), Postives = 136/220 (61.82%), Query Frame = 0


Query: 71  TSKFKGVVPQQNGHWGAQIYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDCHRNFPWT 130
           +S+FKGVVPQ NG WGAQIY  HQR+WLGTF  E+EAA AYD AA R R  D   NF  T
Sbjct: 59  SSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAHRFRGRDAVTNFKDT 118

Query: 131 KFTIEEPNFQKLYTTEALLNMLKDGSYRTKFAEYLRD-CSESAQTSASPSSEKVHNNGGT 190
            F  EE  F   ++   +++ML+  +Y+ +  +  R+      +T+A   +  V   G  
Sbjct: 119 TFE-EEVEFLNAHSKSEIVDMLRKHTYKEELDQRKRNRDGNGKETTAFALASMVVMTGFK 178

Query: 191 SIKQLFQKELTPSDVGKLNRLVIPKKYAVKYFPHISASAMENVEHADDDRDVQLVFFDKM 250
           + + LF+K +TPSDVGKLNRLVIPK  A K+FP    +   +V      + + L F D  
Sbjct: 179 TAELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSV------KGMLLNFEDVN 238

Query: 251 LRQWKFRYCYWKSSQSYVFTRGWNRFVKEKQLKANDTIAF 290
            + W+FRY YW SSQSYV T+GW+RFVKEK+L A D I+F
Sbjct: 239 GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISF 271

[Close]

BLAST of Clc06G13230 vs. ExPASy TrEMBL
Match: A0A0A0LTJ1 (DNA-binding protein RAV1 OS=Cucumis sativus OX=3659 GN=Csa_1G269870 PE=3 SV=1)

HSP 1 Score: 626.7 bits (1615), Expect = 6.1e-176
Identity = 303/339 (89.38%), Postives = 316/339 (93.22%), Query Frame = 0


Query: 29  MKQELSSTISKTRVNAIGEALDSSCITCPSPANGCSRQGRSLTSKFKGVVPQQNGHWGAQ 88
           MKQE SS ISK + NA+GE LDSSCITCP P NGCSRQGRSLTSKFKGVVPQQNGHWGAQ
Sbjct: 1   MKQEFSSMISKAKTNAVGETLDSSCITCPLPINGCSRQGRSLTSKFKGVVPQQNGHWGAQ 60

Query: 89  IYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDCHRNFPWTKFTIEEPNFQKLYTTEAL 148
           IYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDCHRNFPWTK TIEEPNFQKLYTTE L
Sbjct: 61  IYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDCHRNFPWTKVTIEEPNFQKLYTTETL 120

Query: 149 LNMLKDGSYRTKFAEYLRDCSESAQTSASPSSEKVHNNGGTSIKQLFQKELTPSDVGKLN 208
           LNM+KDGSYRTKF+EYLRD SES QTSASPS+EK HNNGGTSIKQLFQKELTPSDVGKLN
Sbjct: 121 LNMIKDGSYRTKFSEYLRDRSESTQTSASPSTEKAHNNGGTSIKQLFQKELTPSDVGKLN 180

Query: 209 RLVIPKKYAVKYFPHISASAMENVEHADDDRDVQLVFFDKMLRQWKFRYCYWKSSQSYVF 268
           RLVIPKKYAVKYFP ISAS  ENVEH DDDRD+QL+FFDKM+RQWKFRYCYWKSSQSYVF
Sbjct: 181 RLVIPKKYAVKYFPRISASTTENVEHVDDDRDLQLLFFDKMMRQWKFRYCYWKSSQSYVF 240

Query: 269 TRGWNRFVKEKQLKANDTIAFYLCEAAKASDSTTTFCVVDVKNRDNGGSLVENETTCSEL 328
           TRGWNRFVKEKQLKANDTIAFYLCEAAK+SDS TTFCVVDVKNRDN G LVENETTCSEL
Sbjct: 241 TRGWNRFVKEKQLKANDTIAFYLCEAAKSSDSKTTFCVVDVKNRDNSGGLVENETTCSEL 300

Query: 329 QLDLRLEEVDESVSPTHVDDELKDDHEVKGFKLFGVHIK 368
           QL+LR  EV+ESVSP H+DDELKD+ EVKGFKLFGVHIK
Sbjct: 301 QLNLRHGEVEESVSPKHIDDELKDEREVKGFKLFGVHIK 339

[Close]

BLAST of Clc06G13230 vs. ExPASy TrEMBL
Match: A0A5D3BVW8 (AP2/ERF and B3 domain-containing transcription factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00430 PE=3 SV=1)

HSP 1 Score: 622.9 bits (1605), Expect = 8.8e-175
Identity = 303/339 (89.38%), Postives = 315/339 (92.92%), Query Frame = 0


Query: 29  MKQELSSTISKTRVNAIGEALDSSCITCPSPANGCSRQGRSLTSKFKGVVPQQNGHWGAQ 88
           MKQELSS ISK R NA+G+ LDSSCITCP P NGCSRQGRSLTSKFKGVVPQQNGHWGAQ
Sbjct: 1   MKQELSSMISKARTNAVGDTLDSSCITCPLPTNGCSRQGRSLTSKFKGVVPQQNGHWGAQ 60

Query: 89  IYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDCHRNFPWTKFTIEEPNFQKLYTTEAL 148
           IYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDCHRNFPWTKFTIEEPNFQKLYTTE L
Sbjct: 61  IYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDCHRNFPWTKFTIEEPNFQKLYTTETL 120

Query: 149 LNMLKDGSYRTKFAEYLRDCSESAQTSASPSSEKVHNNGGTSIKQLFQKELTPSDVGKLN 208
           LNM+KDGSYRTKF+EYLRDCSES QTS SPS+EK HNNGGTSIKQLFQKELTPSDVGKLN
Sbjct: 121 LNMIKDGSYRTKFSEYLRDCSESTQTSVSPSTEKAHNNGGTSIKQLFQKELTPSDVGKLN 180

Query: 209 RLVIPKKYAVKYFPHISASAMENVEHADDDRDVQLVFFDKMLRQWKFRYCYWKSSQSYVF 268
           RLVIPKKYAVKYFP ISAS  ENVE  DDDRDVQLVFFDKM+RQWKFRYCYWKSSQSYVF
Sbjct: 181 RLVIPKKYAVKYFPQISASTTENVEPVDDDRDVQLVFFDKMMRQWKFRYCYWKSSQSYVF 240

Query: 269 TRGWNRFVKEKQLKANDTIAFYLCEAAKASDSTTTFCVVDVKNRDNGGSLVENETTCSEL 328
           TRGWNRFVKEKQLKANDTIAFYLCEAA +SDS TTFCVVDV NRDN G LVENETTCSEL
Sbjct: 241 TRGWNRFVKEKQLKANDTIAFYLCEAA-SSDSKTTFCVVDVNNRDNSGGLVENETTCSEL 300

Query: 329 QLDLRLEEVDESVSPTHVDDELKDDHEVKGFKLFGVHIK 368
           QL+LR  EV+ESVSP H+D+ELKD+ EVKGFKLFGVHIK
Sbjct: 301 QLNLRHGEVEESVSPKHIDNELKDEREVKGFKLFGVHIK 338

[Close]

BLAST of Clc06G13230 vs. ExPASy TrEMBL
Match: A0A1S3B909 (AP2/ERF and B3 domain-containing transcription factor At1g50680-like OS=Cucumis melo OX=3656 GN=LOC103487363 PE=3 SV=1)

HSP 1 Score: 622.9 bits (1605), Expect = 8.8e-175
Identity = 303/339 (89.38%), Postives = 315/339 (92.92%), Query Frame = 0


Query: 29  MKQELSSTISKTRVNAIGEALDSSCITCPSPANGCSRQGRSLTSKFKGVVPQQNGHWGAQ 88
           MKQELSS ISK R NA+G+ LDSSCITCP P NGCSRQGRSLTSKFKGVVPQQNGHWGAQ
Sbjct: 1   MKQELSSMISKARTNAVGDTLDSSCITCPLPTNGCSRQGRSLTSKFKGVVPQQNGHWGAQ 60

Query: 89  IYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDCHRNFPWTKFTIEEPNFQKLYTTEAL 148
           IYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDCHRNFPWTKFTIEEPNFQKLYTTE L
Sbjct: 61  IYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDCHRNFPWTKFTIEEPNFQKLYTTETL 120

Query: 149 LNMLKDGSYRTKFAEYLRDCSESAQTSASPSSEKVHNNGGTSIKQLFQKELTPSDVGKLN 208
           LNM+KDGSYRTKF+EYLRDCSES QTS SPS+EK HNNGGTSIKQLFQKELTPSDVGKLN
Sbjct: 121 LNMIKDGSYRTKFSEYLRDCSESTQTSVSPSTEKAHNNGGTSIKQLFQKELTPSDVGKLN 180

Query: 209 RLVIPKKYAVKYFPHISASAMENVEHADDDRDVQLVFFDKMLRQWKFRYCYWKSSQSYVF 268
           RLVIPKKYAVKYFP ISAS  ENVE  DDDRDVQLVFFDKM+RQWKFRYCYWKSSQSYVF
Sbjct: 181 RLVIPKKYAVKYFPQISASTTENVEPVDDDRDVQLVFFDKMMRQWKFRYCYWKSSQSYVF 240

Query: 269 TRGWNRFVKEKQLKANDTIAFYLCEAAKASDSTTTFCVVDVKNRDNGGSLVENETTCSEL 328
           TRGWNRFVKEKQLKANDTIAFYLCEAA +SDS TTFCVVDV NRDN G LVENETTCSEL
Sbjct: 241 TRGWNRFVKEKQLKANDTIAFYLCEAA-SSDSKTTFCVVDVNNRDNSGGLVENETTCSEL 300

Query: 329 QLDLRLEEVDESVSPTHVDDELKDDHEVKGFKLFGVHIK 368
           QL+LR  EV+ESVSP H+D+ELKD+ EVKGFKLFGVHIK
Sbjct: 301 QLNLRHGEVEESVSPKHIDNELKDEREVKGFKLFGVHIK 338

[Close]

BLAST of Clc06G13230 vs. ExPASy TrEMBL
Match: A0A6J1JHM0 (AP2/ERF and B3 domain-containing transcription factor At1g50680-like OS=Cucurbita maxima OX=3661 GN=LOC111485785 PE=3 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 3.6e-160
Identity = 286/339 (84.37%), Postives = 300/339 (88.50%), Query Frame = 0


Query: 29  MKQELSSTISKTRVNAIGEALDSSCITCPSPANGCSRQGRSLTSKFKGVVPQQNGHWGAQ 88
           MKQELSS ISK + NAIGE     CITCP PA+GCSRQGRSLTSKFKGVV QQNGHWG Q
Sbjct: 1   MKQELSSMISKAKTNAIGE----DCITCPFPASGCSRQGRSLTSKFKGVVLQQNGHWGTQ 60

Query: 89  IYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDCHRNFPWTKFTIEEPNFQKLYTTEAL 148
           IYANH RIWLGTFKSE+EAAMAYDSAAIRIRSGDCHRNFPWTKFTIEEPNFQ LYTT AL
Sbjct: 61  IYANHHRIWLGTFKSEDEAAMAYDSAAIRIRSGDCHRNFPWTKFTIEEPNFQNLYTTAAL 120

Query: 149 LNMLKDGSYRTKFAEYLRDCSESAQTSASPSSEKVHNNGGTSIKQLFQKELTPSDVGKLN 208
           L+MLKD SYRTKFAEYLRDC ESAQT ASPS+EK+H+NG TSIKQLFQKELTPSDVGKLN
Sbjct: 121 LSMLKDSSYRTKFAEYLRDCLESAQT-ASPSAEKLHDNGRTSIKQLFQKELTPSDVGKLN 180

Query: 209 RLVIPKKYAVKYFPHISASAMENVEHADDDRDVQLVFFDKMLRQWKFRYCYWKSSQSYVF 268
           RLVIPKKYAVKYFPHI AS ++NV+  DDD DVQLV FDKM+RQWKFRYCYWKSSQSYVF
Sbjct: 181 RLVIPKKYAVKYFPHIPASTIDNVKRVDDDCDVQLVLFDKMMRQWKFRYCYWKSSQSYVF 240

Query: 269 TRGWNRFVKEKQLKANDTIAFYLCEAAKASDSTTTFCVVDVKNRDNGGSLVENETTCSEL 328
           TRGWNRFVKEKQLKANDTI FYLCEAAKASD+ TTFCVVDVKNRDN GSL ENE T SE+
Sbjct: 241 TRGWNRFVKEKQLKANDTITFYLCEAAKASDANTTFCVVDVKNRDNHGSLTENEITSSEM 300

Query: 329 QLDLRLEEVDESVSPTHVDDELKDDHEVKGFKLFGVHIK 368
           QLDL  EEV+ SV P H DDEL DD EV GFKLFGVHIK
Sbjct: 301 QLDLSHEEVNGSVLPKHADDELNDDLEVSGFKLFGVHIK 334

[Close]

BLAST of Clc06G13230 vs. ExPASy TrEMBL
Match: A0A6J1C120 (AP2/ERF and B3 domain-containing transcription factor At1g50680-like OS=Momordica charantia OX=3673 GN=LOC111007466 PE=3 SV=1)

HSP 1 Score: 571.6 bits (1472), Expect = 2.3e-159
Identity = 283/341 (82.99%), Postives = 300/341 (87.98%), Query Frame = 0


Query: 28  IMKQELSSTISKTRVNAIGEALDSSCITCPSPANGCSRQGRSLTSKFKGVVPQQNGHWGA 87
           +MKQE  S ISK RVNAI E  DSSCITCP PANGC R GRSLTSKFKGVVPQQNGHWGA
Sbjct: 1   MMKQEWPSMISKIRVNAIAEGSDSSCITCPFPANGCRRLGRSLTSKFKGVVPQQNGHWGA 60

Query: 88  QIYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDCHRNFPWTKFTIEEPNFQKLYTTEA 147
           QIYANHQRIWLGTFKSEN+AAMAYDSAAIRIRSGDCHRNFPWTKFTIEEPNFQKLYTTEA
Sbjct: 61  QIYANHQRIWLGTFKSENDAAMAYDSAAIRIRSGDCHRNFPWTKFTIEEPNFQKLYTTEA 120

Query: 148 LLNMLKDGSYRTKFAEYLRDCSESAQTSASPSSEKVHNNGGTSIKQLFQKELTPSDVGKL 207
           LLNMLKDGSYRTKFAEYLRD SES+Q+S  PS+ K+H NGGTSIKQLFQKELTPSDVGKL
Sbjct: 121 LLNMLKDGSYRTKFAEYLRDRSESSQSSVGPSAGKMHKNGGTSIKQLFQKELTPSDVGKL 180

Query: 208 NRLVIPKKYAVKYFPHISASAMENVEH-ADDDRDVQLVFFDKMLRQWKFRYCYWKSSQSY 267
           NRLVIPKKYAVKYFP ISA   EN E   DDDRDVQLVFFDKM+RQWKFRYCYWKSSQSY
Sbjct: 181 NRLVIPKKYAVKYFPPISACEKENEEGIIDDDRDVQLVFFDKMMRQWKFRYCYWKSSQSY 240

Query: 268 VFTRGWNRFVKEKQLKANDTIAFYLCEAAKASDSTTTFCVVDVKNRDNGGSLVENETTCS 327
           VFTRGWNRFVKEKQL+ANDTIAFYLCEA KAS + TTFCVVDVKNR N GS +EN     
Sbjct: 241 VFTRGWNRFVKEKQLRANDTIAFYLCEATKASATKTTFCVVDVKNRHNSGSSIENNIQSC 300

Query: 328 ELQLDLRLEEVDESVSPTHVDDELKDDHEVKGFKLFGVHIK 368
           E+QLD   +E++ESVSP  V++E+KDD EVK FKLFGVHIK
Sbjct: 301 EMQLDFLRDEIEESVSPKQVNNEIKDDAEVKSFKLFGVHIK 341

[Close]

BLAST of Clc06G13230 vs. TAIR 10
Match: AT1G51120.1 (AP2/B3 transcription factor family protein )

HSP 1 Score: 310.5 bits (794), Expect = 1.9e-84
Identity = 166/325 (51.08%), Postives = 216/325 (66.46%), Query Frame = 0


Query: 57  PSPANGCSRQGRSLTSKFKGVVPQQNGHWGAQIYANHQRIWLGTFKSENEAAMAYDSAAI 116
           P+     ++   S T+KFKGVV QQNGHWGAQIYA+H+RIWLGTFKS +EAA AYDSA+I
Sbjct: 30  PTEVTTTTKPALSNTTKFKGVVQQQNGHWGAQIYADHRRIWLGTFKSAHEAAAAYDSASI 89

Query: 117 RIRSGDC--HRNFPWTKFTIEEPNFQKLYTTEALLNMLKDGSYRTKFAEYLRDCSESAQT 176
           ++RS D   HRNFPW+ FT+ EP+FQ+ YTTEA+LNM++DGSY+ KF ++LR  S+    
Sbjct: 90  KLRSFDANSHRNFPWSDFTLHEPDFQECYTTEAVLNMIRDGSYQHKFRDFLRIRSQIVAN 149

Query: 177 SASPSSEKV--------HNNGGTSIKQLFQKELTPSDVGKLNRLVIPKKYAVKYFPHISA 236
                S++V         +N   S  QLFQKELTPSDVGKLNRLVIPKKYAVKY P IS 
Sbjct: 150 INIVGSKQVLGGGEGGQESNKCFSCTQLFQKELTPSDVGKLNRLVIPKKYAVKYMPFISD 209

Query: 237 SAMENVEHADDDRDVQLVFFDKMLRQWKFRYCYWKSSQSYVFTRGWNRFVKEKQLKANDT 296
              E  E ++   DV++VF+D+ +RQWKFRYCYW+SSQS+VFTRGWN FVKEK LK  D 
Sbjct: 210 DQSEK-ETSEGVEDVEVVFYDRAMRQWKFRYCYWRSSQSFVFTRGWNGFVKEKNLKEKDI 269

Query: 297 IAFYLCEAAK----ASDSTTTFCVVDVKNRDNGGSLVENETTCSELQLDLRLEEVDESVS 356
           I FY C+           + TF ++DV +    G +V  E   +  ++    E   E++ 
Sbjct: 270 IVFYTCDVPNNVKTLEGQSKTFLMIDVHHFSGNGFVVPEEVNKTVHEISDE-EMKTETLF 329

Query: 357 PTHVDDELKDDHEVKGFKLFGVHIK 368
            + V++E K + +  GF LFGV I+
Sbjct: 330 TSKVEEETKSEEKKGGFMLFGVRIQ 352

[Close]

BLAST of Clc06G13230 vs. TAIR 10
Match: AT1G50680.1 (AP2/B3 transcription factor family protein )

HSP 1 Score: 306.2 bits (783), Expect = 3.5e-83
Identity = 163/309 (52.75%), Postives = 205/309 (66.34%), Query Frame = 0


Query: 73  KFKGVVPQQNGHWGAQIYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDC--HRNFPWT 132
           K+KGVV QQNGHWGAQIYA+H+RIWLGTFKS +EAA AYDSA+I++RS D   HRNFPW+
Sbjct: 27  KYKGVVQQQNGHWGAQIYADHKRIWLGTFKSADEAATAYDSASIKLRSFDANSHRNFPWS 86

Query: 133 KFTIEEPNFQKLYTTEALLNMLKDGSYRTKFAEYLRDCSE--SAQTSASPSSEKVHNNGG 192
             T+ EP+FQ  YTTE +LNM++DGSY+ KF ++LR  S+  ++     P   +   N  
Sbjct: 87  TITLNEPDFQNCYTTETVLNMIRDGSYQHKFRDFLRIRSQIVASINIGGPKQARGEVNQE 146

Query: 193 T----SIKQLFQKELTPSDVGKLNRLVIPKKYAVKYFPHISA--SAMENVEHADDDRDVQ 252
           +    S  QLFQKELTPSDVGKLNRLVIPKKYAVKY P ISA  S  E  E      DV+
Sbjct: 147 SDKCFSCTQLFQKELTPSDVGKLNRLVIPKKYAVKYMPFISADQSEKEEGEIVGSVEDVE 206

Query: 253 LVFFDKMLRQWKFRYCYWKSSQSYVFTRGWNRFVKEKQLKANDTIAFYLCEAAK----AS 312
           +VF+D+ +RQWKFRYCYWKSSQS+VFTRGWN FVKEK LK  D IAFY C+         
Sbjct: 207 VVFYDRAMRQWKFRYCYWKSSQSFVFTRGWNSFVKEKNLKEKDVIAFYTCDVPNNVKTLE 266

Query: 313 DSTTTFCVVDVKNRDNGGSLVENETTCSELQLDLRLEEVDESVSPTHVDDELKDDHEVKG 368
                F ++DV    + GS+V  E + +     +++++ +  VS    D E K +    G
Sbjct: 267 GQRKNFLMIDVHCFSDNGSVVAEEVSMTVHDSSVQVKKTENLVSSMLEDKETKSEENKGG 326

[Close]

BLAST of Clc06G13230 vs. TAIR 10
Match: AT1G13260.1 (related to ABI3/VP1 1 )

HSP 1 Score: 189.5 bits (480), Expect = 4.8e-48
Identity = 104/235 (44.26%), Postives = 141/235 (60.00%), Query Frame = 0


Query: 61  NGCSRQGRSL-TSKFKGVVPQQNGHWGAQIYANHQRIWLGTFKSENEAAMAYDSAAIRIR 120
           NG   + R L +SK+KGVVPQ NG WGAQIY  HQR+WLGTF  E+EAA AYD A  R R
Sbjct: 48  NGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAVHRFR 107

Query: 121 SGDCHRNFPWTKFTIEEPNFQKLYTTEALLNMLKDGSYRTKFAEYLRDCSESAQ-----T 180
             D   NF   K   +E +F   ++   +++ML+  +Y  +  +  R  + +        
Sbjct: 108 RRDAVTNFKDVKMDEDEVDFLNSHSKSEIVDMLRKHTYNEELEQSKRRRNGNGNMTRTLL 167

Query: 181 SASPSSEKVHNNGGTSIKQLFQKELTPSDVGKLNRLVIPKKYAVKYFPHISASAMENVEH 240
           ++  S++ V   G  S + LF+K +TPSDVGKLNRLVIPK +A K+FP  S++       
Sbjct: 168 TSGLSNDGVSTTGFRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNV------ 227

Query: 241 ADDDRDVQLVFFDKMLRQWKFRYCYWKSSQSYVFTRGWNRFVKEKQLKANDTIAF 290
               + V L F D   + W+FRY YW SSQSYV T+GW+RFVKEK L+A D ++F
Sbjct: 228 --SVKGVLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSF 274

[Close]

BLAST of Clc06G13230 vs. TAIR 10
Match: AT3G25730.1 (ethylene response DNA binding factor 3 )

HSP 1 Score: 184.1 bits (466), Expect = 2.0e-46
Identity = 103/220 (46.82%), Postives = 136/220 (61.82%), Query Frame = 0


Query: 71  TSKFKGVVPQQNGHWGAQIYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDCHRNFPWT 130
           +S+FKGVVPQ NG WGAQIY  HQR+WLGTF  E+EAA AYD AA R R  D   NF  T
Sbjct: 59  SSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAHRFRGRDAVTNFKDT 118

Query: 131 KFTIEEPNFQKLYTTEALLNMLKDGSYRTKFAEYLRD-CSESAQTSASPSSEKVHNNGGT 190
            F  EE  F   ++   +++ML+  +Y+ +  +  R+      +T+A   +  V   G  
Sbjct: 119 TFE-EEVEFLNAHSKSEIVDMLRKHTYKEELDQRKRNRDGNGKETTAFALASMVVMTGFK 178

Query: 191 SIKQLFQKELTPSDVGKLNRLVIPKKYAVKYFPHISASAMENVEHADDDRDVQLVFFDKM 250
           + + LF+K +TPSDVGKLNRLVIPK  A K+FP    +   +V      + + L F D  
Sbjct: 179 TAELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSV------KGMLLNFEDVN 238

Query: 251 LRQWKFRYCYWKSSQSYVFTRGWNRFVKEKQLKANDTIAF 290
            + W+FRY YW SSQSYV T+GW+RFVKEK+L A D I+F
Sbjct: 239 GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISF 271

[Close]

BLAST of Clc06G13230 vs. TAIR 10
Match: AT1G68840.1 (related to ABI3/VP1 2 )

HSP 1 Score: 177.6 bits (449), Expect = 1.9e-44
Identity = 110/273 (40.29%), Postives = 153/273 (56.04%), Query Frame = 0


Query: 23  SFLRTIMKQELSSTISKTRVNAIGEALDSSCITCPSPANGCSRQGRSL-TSKFKGVVPQQ 82
           SF  T  K+      +  R+  +G    S  +    P NG   + R L +SK+KGVVPQ 
Sbjct: 16  SFSATTAKKLSPPPAAALRLYRMGSGGSSVVL---DPENGLETESRKLPSSKYKGVVPQP 75

Query: 83  NGHWGAQIYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDCHRNFPWTKFTIEEPN--F 142
           NG WGAQIY  HQR+WLGTF  + EAA +YD AA R R  D   NF   K  +E+ +  F
Sbjct: 76  NGRWGAQIYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRDAVVNF---KNVLEDGDLAF 135

Query: 143 QKLYTTEALLNMLKDGSYRTKFAEYLRD---CSESAQTSASPSSEKVHNNGGTSIKQLFQ 202
            + ++   +++ML+  +Y  +  +  +     S  A    + SS   ++    + + LF+
Sbjct: 136 LEAHSKAEIVDMLRKHTYADELEQNNKRQLFLSVDANGKRNGSSTTQNDKVLKTREVLFE 195

Query: 203 KELTPSDVGKLNRLVIPKKYAVKYFPHISASAMENVEHADDDRDVQLVFFDKMLRQWKFR 262
           K +TPSDVGKLNRLVIPK++A K+FP  S S           + V + F D   + W+FR
Sbjct: 196 KAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVT-------KGVLINFEDVNGKVWRFR 255

Query: 263 YCYWKSSQSYVFTRGWNRFVKEKQLKANDTIAF 290
           Y YW SSQSYV T+GW+RFVKEK L+A D + F
Sbjct: 256 YSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTF 275

The following BLAST results are available for this feature:

BLAST of Clc06G13230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031744995.1	6.7e-177	88.92	AP2/ERF and B3 domain-containing transcription factor At1g50680 isoform X1 [Cucu...	[more]
XP_004146691.1	1.3e-175	89.38	AP2/ERF and B3 domain-containing transcription factor At1g50680 isoform X2 [Cucu...	[more]
XP_008443869.1	1.8e-174	89.38	PREDICTED: AP2/ERF and B3 domain-containing transcription factor At1g50680-like ...	[more]
XP_038879014.1	1.2e-170	89.12	AP2/ERF and B3 domain-containing transcription factor At1g50680-like [Benincasa ...	[more]
KAG7023453.1	7.2e-163	86.14	AP2/ERF and B3 domain-containing transcription factor, partial [Cucurbita argyro...	[more]

BLAST of Clc06G13230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C688	2.6e-83	51.08	AP2/ERF and B3 domain-containing transcription factor At1g51120 OS=Arabidopsis t...	[more]
Q9C6P5	4.9e-82	52.75	AP2/ERF and B3 domain-containing transcription factor At1g50680 OS=Arabidopsis t...	[more]
Q9ZWM9	6.7e-47	44.26	AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thalia...	[more]
Q9AWS0	2.6e-46	40.74	AP2/ERF and B3 domain-containing protein Os01g0141000 OS=Oryza sativa subsp. jap...	[more]
Q9LS06	2.8e-45	46.82	AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thali...	[more]

BLAST of Clc06G13230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTJ1	6.1e-176	89.38	DNA-binding protein RAV1 OS=Cucumis sativus OX=3659 GN=Csa_1G269870 PE=3 SV=1	[more]
A0A5D3BVW8	8.8e-175	89.38	AP2/ERF and B3 domain-containing transcription factor OS=Cucumis melo var. makuw...	[more]
A0A1S3B909	8.8e-175	89.38	AP2/ERF and B3 domain-containing transcription factor At1g50680-like OS=Cucumis ...	[more]
A0A6J1JHM0	3.6e-160	84.37	AP2/ERF and B3 domain-containing transcription factor At1g50680-like OS=Cucurbit...	[more]
A0A6J1C120	2.3e-159	82.99	AP2/ERF and B3 domain-containing transcription factor At1g50680-like OS=Momordic...	[more]

BLAST of Clc06G13230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G51120.1	1.9e-84	51.08	AP2/B3 transcription factor family protein	[more]
AT1G50680.1	3.5e-83	52.75	AP2/B3 transcription factor family protein	[more]
AT1G13260.1	4.8e-48	44.26	related to ABI3/VP1 1	[more]
AT3G25730.1	2.0e-46	46.82	ethylene response DNA binding factor 3	[more]
AT1G68840.1	1.9e-44	40.29	related to ABI3/VP1 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 73..134 e-value: 5.0E-18 score: 75.9
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 72..119 e-value: 3.0E-6 score: 27.4
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 73..128 score: 16.607685
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 72..130 e-value: 2.81528E-23 score: 89.6383
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 195..310 e-value: 1.3E-20 score: 84.5
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 195..294 e-value: 9.7E-24 score: 83.2
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 195..310 score: 13.013514
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 194..306 e-value: 1.45647E-24 score: 94.3168
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 72..129 e-value: 5.1E-16 score: 60.6
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 190..316 e-value: 2.9E-39 score: 135.4
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 194..294
IPR044800	B3 domain-containing transcription factor LEC2-like	PANTHER	PTHR31140	B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3	coord: 29..366
None	No IPR available	PANTHER	PTHR31140:SF58	DNA-BINDING PROTEIN RAV1	coord: 29..366
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 72..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G13230.1	Clc06G13230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity