Clc06G12430 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGACTTTGGCAAAGAGAGAGATCAAAACAGAAGTTGAAGAATAGAACTGTAGAACTTTGAAAGTGACTTTTGGCAGAGATAAACGGAGCCGAAAAGAGGAGAATCAAAGAAACAGACGAGTTTCTTCGCCATTTCCAAACATCTTCCTTAATGCTCTCCCTCCGTTTCTTTTTCAATTTCCTTCGCTAACAATTCTGACGATCACAATTTGTGAATAACCATGTCTTGGTTGTTCAAGTCTCTCCAAGCCACCCATGATGATATCTCAGCCCAATCGCACTTTAACGGTTCATCTTCCCCGTCGGAATGCGTTACTTTCACCACCACCGCTGATCCTTCTCTTAAACACGATTTCTCCGCACTCGGTAAGACGCTGAGCCGCCAGCTACGCGGCTTCGCCAACTTTCTTGCTCCACAACCGTCCTCGGCGGTCGTTTCTGCCGCCGATTCTTCCAATTCGAGTTCGAATTTTTCGTCGCCGTCTCAAACGCTTCAAGGAATTCGCAATGATCTTGCAGAGATTGGCGGTGGCTTGAGAAACGGCTTCTCGATGCTCTCTGTTAATAGCAACAAGGCTGTTGGAGAGATTTCCAGGTTTGCTTCTAACTTGCTGCCGTTTCGGAGACGTTCTGCCGATGATGATGGAGAAGAAGACGAATTCGAAGACGAGGTTATTGATGATACGCCGGGAATTACGAATGAGGTTCTAAATTTTGTGAACGATATTTCTTCGCGGCCAGAGTACTGGACGGATTTTCCTTTGGCGCTCGATGAAACAGGTAAATTCAAAATCTCTTGTAAAATATATTTCAGTGTCTAATTCATAATATTATGAAGCCTAATTTGAAATCCATATATCTTGCAAGTAGAGTAGAGACTAGACATACTGCCTTTAACTATAAATCTAGATCAAGAACTTAACAATTATCAATAACTGATTTCGTCTACCTCATGACCTTTGGAGCTTTTCCAGGAAGCACATGTACTTGTTTCCATCAAGTTGCTTTTTCATTCTCATTTAATGTTTTCATATAGGCCGAGGATGTAAGTCTGATACCTCCCATGTGGTTGAGCTTTCAATTGATTATAAATACATCGACTCTCAACTCAACCCTTATGTTAATTGGAACTGCTAATTGTGTTAGCATCAAAATCCATTGAATATTTCTGCAAGCTTTCTTTTGGTAATGGTAGTTATTGAGAAGTTATATTTCACATTTGGGCACTTTGTATGTGCCTCTATTATGTTGATCGGTCTTCGATTATCATTCACCGTTAGTATAATACTTTCATTAGCTTTATTGCAGATTTTGAAATGTCTGACGTTCAAAGAATGCACATTTCAACTGTTGAGCAATTGGTTCCAAGTATATCAACTCTTAAAATAAAGCTTCAGAGTTTCATGAGCAATGAAATATTCTGGATGATTTATTTTATACTGTTGCTTCCAAGATTGGATCAACCTGATTTTGAGCTTCTAGCAACCTCTGAAGTAAGACTTATTTCCCTTTTTAAATCCATACTCTGCTTTTTTAGGTTGTTTGGAGTTAAAGTTTATTATGATTAATGTTTGCTGTTGCACTAAATCCTAACCTGGAATTGCTTGAGGATTGTTTTCAATCATAAATTCTTGTTTGGAATTAGTTCTGTTTAGTAACTATTTGGAGGTAAAAATGGAGTTTTAAACCAAATTCTAAAAACAAAAACAAGTTTTTAAAAATTATATATATTTTTTAATTTTCAAAACTAAACTTGGTTTTTGAAAACATTGATAAAAAGTAGATAATAAATCAAGAAATTTACAGGTGGAATAAGTGTTTATAGGCTTGAAAAACTAAAAAGGAAAAAAGAAATAAGTACTGAACGGGTTTACATGATTACATTGCGTTCTGTAGGTTTAATTTACTGTATTTCAAGTTTCTCTTCTGCTGTGCTGCTTACTATTAAAATGTAAAAACTTTTGTCTTCCTTTTCTTTCCTTTAATATCATGTTAGATATGTACAGTATTTTTTCCCATGCTAGATAAATGTCAAATATTTAATATAACTCCTTTTCTTTCCTTTAGTATCATGCTAGAATGGTACAATATTTTTTCCCATGCTAGATAAATGCTAAATATTTAATATAACTTTGATACATTGCACTTGCCTGTTATCGTCAGATTTGAATTGAATATTAGTATGTATGTCAACATTTATATGATGGTGAGGTAACCAGAATCAAAATCCACCACATTTGAGAGAGAAAGCATAATGATTAGCAAAATGGAGTGATCCAAACTTACTGGTTTACTTGATCTTTCTGCTCTGTTGGTCTGATTTACTTCGAATAATCAAAAAACTAACAGTTACGTTCAGCTTTCAGTATGGTCGTTAAGAAAAATGAAACCCAGCCATTTATTTAGGTTTATATTTAAATCTATCTATAAAAATGAAAAAACTAAATAACAAAGATTACAAAATTTAAAGATTAAAGTCATTAAAATTTCAGTTTGCTTAAAGAACGACATAATTGAACTGAAAAACACTATCCAGTTGGTTTCAAACCAAATTATACTTTTTGATGCTCCTGTAGTTGTTTCTGCGATCTATGGCGTGACTAATTGATTACATAGAATGATTAAGTTGGATTTAGAGATCTTTAGAGATCTCTTACATCCATGGCCTTTAAATTAAATTAGAGGGAACAATCTTTAATTACATTAGTTCTGATTCTCTCCTATTAGGATCTTATGCCATATATTTTTGAGCATGTATGAGAGTGATTTTGAAATTATCTTGAATCATTCAAAATAAAAAGAAATGTTAGGTTTTGCACTCTTAAATGCAAGAATAAAATTAAATGAAGGATTATAGGTTGGATTGATTTTGAACATGACAAAGAGATTTCAACTATCTCAAAATCACTTCCAAACATGCCCTTCTGTCTCTACCGTTCAAGTAATTTCTTTTGGAGCATTATTTGAGGCTTTCAATCAAACTTAAATTCCCACTATTCACATCTTTATTCAGATGCATTTTACTTCAATTTTCAGATTATTAATGTAATGTGTTTGATTCTTTTTCGGTAGATTGTTGAAGCAAGAAACATACTTCTGGACAAACTCCAAAGAAAAGAGAAACCACAGGTGAATTCTGAGGACACTTGTGAAAACAATTTGGCATCTGAGGAAAAGCCAAACTGCACTCAAATCATTGAAGGAGGTGAAGGATTGGAAACTCAGGATGGAGATGGAGAGAATACCAATCAACGGTTGGAAAAGGCACATTCAGAAACTTATACAGATGACAAAAAAAGGGTTGGGCTTGAAGATGTCTCATTCAGTGATATAGAGGATGATGGGAGCGATTTGTTTGGAAGATTCTCAGTAACAAACCCACCAAGGATTTCTTCATCAACGGAGTCTAGTGATTGGGTCCAGTTGAATGAGAATCTAATCTCAAAGTTGGATCAGCACAAGACATGGAAGCAGGACAGAGATTCAGAAGGTGAGGATTCAAGCGATTGGTTTGATGTGGATGAGTTTGATTAGAAAGCACCTTCGTATTTCCCCAACCTCAACCCATTTTTTCGTTCTTTTTTTTCCCTAAAATGTTATTTTCTTTTTGGTAGAGAGGCCACAAGGCTTTTAGGTCTTAGTTTATCTTCCCTTTGGTTACTTTTATAGGATGAATTTTGTGCATATGTTAAGGTATTGGGCTTCTGGTAGAATTTAACACATTGTTATTCCTTCAATTGAACGTCCATTTTGGTTTCTCT GGGACTTTGGCAAAGAGAGAGATCAAAACAGAAGTTGAAGAATAGAACTGTAGAACTTTGAAAGTGACTTTTGGCAGAGATAAACGGAGCCGAAAAGAGGAGAATCAAAGAAACAGACGAGTTTCTTCGCCATTTCCAAACATCTTCCTTAATGCTCTCCCTCCGTTTCTTTTTCAATTTCCTTCGCTAACAATTCTGACGATCACAATTTGTGAATAACCATGTCTTGGTTGTTCAAGTCTCTCCAAGCCACCCATGATGATATCTCAGCCCAATCGCACTTTAACGGTTCATCTTCCCCGTCGGAATGCGTTACTTTCACCACCACCGCTGATCCTTCTCTTAAACACGATTTCTCCGCACTCGGTAAGACGCTGAGCCGCCAGCTACGCGGCTTCGCCAACTTTCTTGCTCCACAACCGTCCTCGGCGGTCGTTTCTGCCGCCGATTCTTCCAATTCGAGTTCGAATTTTTCGTCGCCGTCTCAAACGCTTCAAGGAATTCGCAATGATCTTGCAGAGATTGGCGGTGGCTTGAGAAACGGCTTCTCGATGCTCTCTGTTAATAGCAACAAGGCTGTTGGAGAGATTTCCAGGTTTGCTTCTAACTTGCTGCCGTTTCGGAGACGTTCTGCCGATGATGATGGAGAAGAAGACGAATTCGAAGACGAGGTTATTGATGATACGCCGGGAATTACGAATGAGGTTCTAAATTTTGTGAACGATATTTCTTCGCGGCCAGAGTACTGGACGGATTTTCCTTTGGCGCTCGATGAAACAGATTTTGAAATGTCTGACGTTCAAAGAATGCACATTTCAACTGTTGAGCAATTGGTTCCAAGTATATCAACTCTTAAAATAAAGCTTCAGAGTTTCATGAGCAATGAAATATTCTGGATGATTTATTTTATACTGTTGCTTCCAAGATTGGATCAACCTGATTTTGAGCTTCTAGCAACCTCTGAAATTGTTGAAGCAAGAAACATACTTCTGGACAAACTCCAAAGAAAAGAGAAACCACAGGTGAATTCTGAGGACACTTGTGAAAACAATTTGGCATCTGAGGAAAAGCCAAACTGCACTCAAATCATTGAAGGAGGTGAAGGATTGGAAACTCAGGATGGAGATGGAGAGAATACCAATCAACGGTTGGAAAAGGCACATTCAGAAACTTATACAGATGACAAAAAAAGGGTTGGGCTTGAAGATGTCTCATTCAGTGATATAGAGGATGATGGGAGCGATTTGTTTGGAAGATTCTCAGTAACAAACCCACCAAGGATTTCTTCATCAACGGAGTCTAGTGATTGGGTCCAGTTGAATGAGAATCTAATCTCAAAGTTGGATCAGCACAAGACATGGAAGCAGGACAGAGATTCAGAAGGTGAGGATTCAAGCGATTGGTTTGATGTGGATGAGTTTGATTAGAAAGCACCTTCGTATTTCCCCAACCTCAACCCATTTTTTCGTTCTTTTTTTTCCCTAAAATGTTATTTTCTTTTTGGTAGAGAGGCCACAAGGCTTTTAGGTCTTAGTTTATCTTCCCTTTGGTTACTTTTATAGGATGAATTTTGTGCATATGTTAAGGTATTGGGCTTCTGGTAGAATTTAACACATTGTTATTCCTTCAATTGAACGTCCATTTTGGTTTCTCT ATGTCTTGGTTGTTCAAGTCTCTCCAAGCCACCCATGATGATATCTCAGCCCAATCGCACTTTAACGGTTCATCTTCCCCGTCGGAATGCGTTACTTTCACCACCACCGCTGATCCTTCTCTTAAACACGATTTCTCCGCACTCGGTAAGACGCTGAGCCGCCAGCTACGCGGCTTCGCCAACTTTCTTGCTCCACAACCGTCCTCGGCGGTCGTTTCTGCCGCCGATTCTTCCAATTCGAGTTCGAATTTTTCGTCGCCGTCTCAAACGCTTCAAGGAATTCGCAATGATCTTGCAGAGATTGGCGGTGGCTTGAGAAACGGCTTCTCGATGCTCTCTGTTAATAGCAACAAGGCTGTTGGAGAGATTTCCAGGTTTGCTTCTAACTTGCTGCCGTTTCGGAGACGTTCTGCCGATGATGATGGAGAAGAAGACGAATTCGAAGACGAGGTTATTGATGATACGCCGGGAATTACGAATGAGGTTCTAAATTTTGTGAACGATATTTCTTCGCGGCCAGAGTACTGGACGGATTTTCCTTTGGCGCTCGATGAAACAGATTTTGAAATGTCTGACGTTCAAAGAATGCACATTTCAACTGTTGAGCAATTGGTTCCAAGTATATCAACTCTTAAAATAAAGCTTCAGAGTTTCATGAGCAATGAAATATTCTGGATGATTTATTTTATACTGTTGCTTCCAAGATTGGATCAACCTGATTTTGAGCTTCTAGCAACCTCTGAAATTGTTGAAGCAAGAAACATACTTCTGGACAAACTCCAAAGAAAAGAGAAACCACAGGTGAATTCTGAGGACACTTGTGAAAACAATTTGGCATCTGAGGAAAAGCCAAACTGCACTCAAATCATTGAAGGAGGTGAAGGATTGGAAACTCAGGATGGAGATGGAGAGAATACCAATCAACGGTTGGAAAAGGCACATTCAGAAACTTATACAGATGACAAAAAAAGGGTTGGGCTTGAAGATGTCTCATTCAGTGATATAGAGGATGATGGGAGCGATTTGTTTGGAAGATTCTCAGTAACAAACCCACCAAGGATTTCTTCATCAACGGAGTCTAGTGATTGGGTCCAGTTGAATGAGAATCTAATCTCAAAGTTGGATCAGCACAAGACATGGAAGCAGGACAGAGATTCAGAAGGTGAGGATTCAAGCGATTGGTTTGATGTGGATGAGTTTGATTAG MSWLFKSLQATHDDISAQSHFNGSSSPSECVTFTTTADPSLKHDFSALGKTLSRQLRGFANFLAPQPSSAVVSAADSSNSSSNFSSPSQTLQGIRNDLAEIGGGLRNGFSMLSVNSNKAVGEISRFASNLLPFRRRSADDDGEEDEFEDEVIDDTPGITNEVLNFVNDISSRPEYWTDFPLALDETDFEMSDVQRMHISTVEQLVPSISTLKIKLQSFMSNEIFWMIYFILLLPRLDQPDFELLATSEIVEARNILLDKLQRKEKPQVNSEDTCENNLASEEKPNCTQIIEGGEGLETQDGDGENTNQRLEKAHSETYTDDKKRVGLEDVSFSDIEDDGSDLFGRFSVTNPPRISSSTESSDWVQLNENLISKLDQHKTWKQDRDSEGEDSSDWFDVDEFD Homology
BLAST of Clc06G12430 vs. NCBI nr
Match: XP_023516908.1 (uncharacterized protein LOC111780673 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 565.8 bits (1457), Expect = 2.9e-157 Identity = 313/406 (77.09%), Postives = 345/406 (84.98%), Query Frame = 0
BLAST of Clc06G12430 vs. NCBI nr
Match: XP_022987752.1 (uncharacterized protein LOC111485208 [Cucurbita maxima]) HSP 1 Score: 558.9 bits (1439), Expect = 3.5e-155 Identity = 313/408 (76.72%), Postives = 346/408 (84.80%), Query Frame = 0
BLAST of Clc06G12430 vs. NCBI nr
Match: XP_022960748.1 (uncharacterized protein LOC111461455 [Cucurbita moschata]) HSP 1 Score: 555.1 bits (1429), Expect = 5.1e-154 Identity = 310/406 (76.35%), Postives = 341/406 (83.99%), Query Frame = 0
BLAST of Clc06G12430 vs. NCBI nr
Match: KAG6589824.1 (hypothetical protein SDJN03_15247, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023494.1 hypothetical protein SDJN02_14520 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 554.3 bits (1427), Expect = 8.7e-154 Identity = 311/408 (76.23%), Postives = 343/408 (84.07%), Query Frame = 0
BLAST of Clc06G12430 vs. NCBI nr
Match: KAG6587879.1 (hypothetical protein SDJN03_16444, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 533.9 bits (1374), Expect = 1.2e-147 Identity = 295/413 (71.43%), Postives = 334/413 (80.87%), Query Frame = 0
BLAST of Clc06G12430 vs. ExPASy TrEMBL
Match: A0A6J1JB79 (uncharacterized protein LOC111485208 OS=Cucurbita maxima OX=3661 GN=LOC111485208 PE=4 SV=1) HSP 1 Score: 558.9 bits (1439), Expect = 1.7e-155 Identity = 313/408 (76.72%), Postives = 346/408 (84.80%), Query Frame = 0
BLAST of Clc06G12430 vs. ExPASy TrEMBL
Match: A0A6J1H9V9 (uncharacterized protein LOC111461455 OS=Cucurbita moschata OX=3662 GN=LOC111461455 PE=4 SV=1) HSP 1 Score: 555.1 bits (1429), Expect = 2.5e-154 Identity = 310/406 (76.35%), Postives = 341/406 (83.99%), Query Frame = 0
BLAST of Clc06G12430 vs. ExPASy TrEMBL
Match: A0A5A7U937 (Putative BSD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G001300 PE=4 SV=1) HSP 1 Score: 530.4 bits (1365), Expect = 6.5e-147 Identity = 307/419 (73.27%), Postives = 329/419 (78.52%), Query Frame = 0
BLAST of Clc06G12430 vs. ExPASy TrEMBL
Match: A0A6J1EB50 (uncharacterized protein LOC111432412 OS=Cucurbita moschata OX=3662 GN=LOC111432412 PE=4 SV=1) HSP 1 Score: 529.6 bits (1363), Expect = 1.1e-146 Identity = 295/413 (71.43%), Postives = 335/413 (81.11%), Query Frame = 0
BLAST of Clc06G12430 vs. ExPASy TrEMBL
Match: A0A5D3C7N5 (Putative BSD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G00610 PE=4 SV=1) HSP 1 Score: 528.9 bits (1361), Expect = 1.9e-146 Identity = 306/417 (73.38%), Postives = 328/417 (78.66%), Query Frame = 0
BLAST of Clc06G12430 vs. TAIR 10
Match: AT2G10950.1 (BSD domain-containing protein ) HSP 1 Score: 167.2 bits (422), Expect = 2.8e-41 Identity = 143/403 (35.48%), Postives = 200/403 (49.63%), Query Frame = 0
BLAST of Clc06G12430 vs. TAIR 10
Match: AT5G65910.1 (BSD domain-containing protein ) HSP 1 Score: 134.8 bits (338), Expect = 1.5e-31 Identity = 136/463 (29.37%), Postives = 208/463 (44.92%), Query Frame = 0
BLAST of Clc06G12430 vs. TAIR 10
Match: AT3G49800.1 (BSD domain-containing protein ) HSP 1 Score: 130.6 bits (327), Expect = 2.9e-30 Identity = 92/249 (36.95%), Postives = 133/249 (53.41%), Query Frame = 0
BLAST of Clc06G12430 vs. TAIR 10
Match: AT1G10720.1 (BSD domain-containing protein ) HSP 1 Score: 115.5 bits (288), Expect = 9.6e-26 Identity = 85/241 (35.27%), Postives = 127/241 (52.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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