Clc06G12240 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G12240
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	cucumber peeling cupredoxin-like
Location	ClcChr06: 22901736 .. 22903013 (+)
RNA-Seq Expression	Clc06G12240
Synteny	Clc06G12240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCATCAAAATGGTTTCAACACAAAAAATGAGTTCCCTTCCTTCTCTCCTCTTCATTGCCGTTTTCCTCCAGGTTGTTGCTGCCGTCGACCACCGCGTCGGAGGTGATTTTGGTTGGAACCTACCACCGACTCCCACCTTCTTCTCCGAGTGGGCTCGCAATACAACTTTCTTTGTCGGCGATACTCTAAGTAAATAATCATTTACTCTATTCTGTTTTGCTCAATTAACTTGCGTTTCAATTTTGTCTCTAAATTTTGATAGGTTTCATTTTTAACTTTTTATTTCGAAATTTGGTTCAAAACTATTCTGCAGTAAAATTGCTCTAACAAATATATATTCACCATTAAAATAAAAGATGAAAATTGACCTAGCAATCAATTTCTAAACATTAGAAAGCATACATACTATTATTTGCAACTATATATATATATAACATTAAGATTATTGTTAAAATTTATTTCATATAAAAATGTATCATCGAAATCATATGCATAGCCAATTTTTACACTTCAACTGTTTGTCAAATTACATGATTAAATATTGTAAATAATATCAGGTATGTTTTCCAATTTTTACACATTAATCATAATTATTATATCAATTTTCATTTTTTTTTAATAACAAAAAAGTATAGTTTTTAAAACATGTTTCAAAGTTGATGGATAAAAATAAAAGTATCAAAATAAGCCTAGCTTATGAATATTGACCTCGTAATAAAAAATTTCATTCCTCTCCCACTCTATATCTTGTCAAAACAAATAGGTTAAAATATCATTGTTGTCCTCCTACTTTGAAGTTTGTGTCCGTACTTTTAATAAATCTTAAATTCAGTATTTTAAAAAGTTAATTTTTATGAAAATTGATTAAATAATAATAATAATAATAATGTTGAAGTAAGGAAATAGGTTGTAAGAAAAATAGTAAAAAGAAGCGAGTGTTTTTGTGTAGGGTTCAATTCAAGTGGGAATGAAACTCACAATTATGCAATGCCGGAGTCTGAAGCGGAGTTTGAAAGGTGCGTGAAGCCAGGATTATTTTTCGAGAATGTAATTTTTGGTATCTTGGATCGTCCTGGCCCTAAATACTTCATATGTAATGTTGGGAATCATTGCAATTTGGGCATGAAATTTGGTATTCAAGTTTTGCCTATACCTGGATCAATCCCGCCTAATGCTGCCCTCAAAATTGCTTCATTTCCTGCACTACTACTTCTCTTCATCACCATCATCACCAATTTCTTCTTCTTCCTTTGACATATTTATACTTCCAAATTAT

mRNA sequence

AATCATCAAAATGGTTTCAACACAAAAAATGAGTTCCCTTCCTTCTCTCCTCTTCATTGCCGTTTTCCTCCAGGTTGTTGCTGCCGTCGACCACCGCGTCGGAGGTGATTTTGGTTGGAACCTACCACCGACTCCCACCTTCTTCTCCGAGTGGGCTCGCAATACAACTTTCTTTGTCGGCGATACTCTAAGGTTCAATTCAAGTGGGAATGAAACTCACAATTATGCAATGCCGGAGTCTGAAGCGGAGTTTGAAAGGTGCGTGAAGCCAGGATTATTTTTCGAGAATGTAATTTTTGGTATCTTGGATCGTCCTGGCCCTAAATACTTCATATGTAATGTTGGGAATCATTGCAATTTGGGCATGAAATTTGGTATTCAAGTTTTGCCTATACCTGGATCAATCCCGCCTAATGCTGCCCTCAAAATTGCTTCATTTCCTGCACTACTACTTCTCTTCATCACCATCATCACCAATTTCTTCTTCTTCCTTTGACATATTTATACTTCCAAATTAT

Coding sequence (CDS)

ATGGTTTCAACACAAAAAATGAGTTCCCTTCCTTCTCTCCTCTTCATTGCCGTTTTCCTCCAGGTTGTTGCTGCCGTCGACCACCGCGTCGGAGGTGATTTTGGTTGGAACCTACCACCGACTCCCACCTTCTTCTCCGAGTGGGCTCGCAATACAACTTTCTTTGTCGGCGATACTCTAAGGTTCAATTCAAGTGGGAATGAAACTCACAATTATGCAATGCCGGAGTCTGAAGCGGAGTTTGAAAGGTGCGTGAAGCCAGGATTATTTTTCGAGAATGTAATTTTTGGTATCTTGGATCGTCCTGGCCCTAAATACTTCATATGTAATGTTGGGAATCATTGCAATTTGGGCATGAAATTTGGTATTCAAGTTTTGCCTATACCTGGATCAATCCCGCCTAATGCTGCCCTCAAAATTGCTTCATTTCCTGCACTACTACTTCTCTTCATCACCATCATCACCAATTTCTTCTTCTTCCTTTGA

Protein sequence

MVSTQKMSSLPSLLFIAVFLQVVAAVDHRVGGDFGWNLPPTPTFFSEWARNTTFFVGDTLRFNSSGNETHNYAMPESEAEFERCVKPGLFFENVIFGILDRPGPKYFICNVGNHCNLGMKFGIQVLPIPGSIPPNAALKIASFPALLLLFITIITNFFFFL

Homology

[Close]

BLAST of Clc06G12240 vs. NCBI nr
Match: XP_038878652.1 (cucumber peeling cupredoxin-like [Benincasa hispida])

HSP 1 Score: 256.5 bits (654), Expect = 1.5e-64
Identity = 129/161 (80.12%), Postives = 135/161 (83.85%), Query Frame = 0


Query: 1   MVSTQKMSSLPSLLFIAVFLQVVAAVDHRVGGDFGWNLPPTPTFFSEWARNTTFFVGDTL 60
           MVSTQKMS   S LFIAV L VVAAV HRVGGDFGWNLPPTPTFFSEWA N TFFVGD L
Sbjct: 1   MVSTQKMSFFASFLFIAVLLPVVAAV-HRVGGDFGWNLPPTPTFFSEWASNKTFFVGDFL 60

Query: 61  RFNSSGNETHNYAMPESEAEFERCVKPGLFFENVIFGILDRPGPKYFICNVGNHCNLGMK 120
            FNSS NETHNYAMPES+AEF+ CVKPGLFFE V     +RPG KYFICNVGNHCNLGMK
Sbjct: 61  VFNSSANETHNYAMPESQAEFDGCVKPGLFFETVSSVSFNRPGRKYFICNVGNHCNLGMK 120

Query: 121 FGIQVLPIPGSIPPNAALKIASFPALLLLFITIITNFFFFL 162
           F I +LP PGSI PNAALKI +FP LLLLFITIITNFFFF+
Sbjct: 121 FAIDILPKPGSIAPNAALKIVAFPTLLLLFITIITNFFFFV 160

[Close]

BLAST of Clc06G12240 vs. NCBI nr
Match: XP_008443975.1 (PREDICTED: umecyanin-like [Cucumis melo] >KAA0050145.1 umecyanin-like [Cucumis melo var. makuwa] >TYK06401.1 umecyanin-like [Cucumis melo var. makuwa])

HSP 1 Score: 253.4 bits (646), Expect = 1.3e-63
Identity = 118/161 (73.29%), Postives = 136/161 (84.47%), Query Frame = 0


Query: 1   MVSTQKMSSLPSLLFIAVFLQVVAAVDHRVGGDFGWNLPPTPTFFSEWARNTTFFVGDTL 60
           MVSTQK++ L S LFIAV L  VAA+D++VGGDFGWNLPPTPTFFSEWA N TFFVGDTL
Sbjct: 1   MVSTQKLTFLASFLFIAVLLPAVAAIDYQVGGDFGWNLPPTPTFFSEWASNKTFFVGDTL 60

Query: 61  RFNSSGNETHNYAMPESEAEFERCVKPGLFFENVIFGILDRPGPKYFICNVGNHCNLGMK 120
           RFNSS NETHNYAMP S+AE + CVKPG+ F   ++ +LDRPG KYFIC VGNHCNLGMK
Sbjct: 61  RFNSSANETHNYAMPGSQAELDGCVKPGIVFMGGVYPVLDRPGRKYFICEVGNHCNLGMK 120

Query: 121 FGIQVLPIPGSIPPNAALKIASFPALLLLFITIITNFFFFL 162
           F + V+PIPGS+PPNAALK+ +FP LLL+FITII NF FF+
Sbjct: 121 FAVDVMPIPGSMPPNAALKLDAFPMLLLIFITIIINFLFFI 161

[Close]

BLAST of Clc06G12240 vs. NCBI nr
Match: XP_004151459.1 (umecyanin [Cucumis sativus] >KGN65341.1 hypothetical protein Csa_019841 [Cucumis sativus])

HSP 1 Score: 243.0 bits (619), Expect = 1.7e-60
Identity = 118/161 (73.29%), Postives = 134/161 (83.23%), Query Frame = 0


Query: 1   MVSTQKMSSLPSLLFIAVFLQVVAAVDHRVGGDFGWNLPPTPTFFSEWARNTTFFVGDTL 60
           MVSTQK++ L S LFIAV L  VAAVD++VGGDFGWNLPPTPTFFSEWA N TFFVGD L
Sbjct: 1   MVSTQKVTFLASFLFIAVLLPAVAAVDYQVGGDFGWNLPPTPTFFSEWASNKTFFVGDRL 60

Query: 61  RFNSSGNETHNYAMPESEAEFERCVKPGLFFENVIFGILDRPGPKYFICNVGNHCNLGMK 120
           RFNSS NETHNYAMP S+AE + CVKPG+ F   +F +LDRPG +YFIC VGNHCNLGMK
Sbjct: 61  RFNSSANETHNYAMPGSQAELDGCVKPGIVFVGNVFPVLDRPGRRYFICEVGNHCNLGMK 120

Query: 121 FGIQVLPIPGSIPPNAALKIASFPALLLLFITIITNFFFFL 162
           F I V+PI GS+PPNAALKI +FP +LLLFIT+ITNF F +
Sbjct: 121 FAIDVMPILGSMPPNAALKIDAFP-MLLLFITMITNFLFII 160

[Close]

BLAST of Clc06G12240 vs. NCBI nr
Match: XP_023516867.1 (umecyanin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 238.8 bits (608), Expect = 3.2e-59
Identity = 112/158 (70.89%), Postives = 126/158 (79.75%), Query Frame = 0


Query: 2   VSTQKMSSLPSLLFIAVFLQVVAAVDHRVGGDFGWNLPPTPTFFSEWARNTTFFVGDTLR 61
           +++ + S L SLLFI   LQ  AA+DHRVGGDFGWNLPPTPTFFSEWA NTTF VGDTLR
Sbjct: 1   MASTRSSFLASLLFIGALLQAAAAIDHRVGGDFGWNLPPTPTFFSEWATNTTFSVGDTLR 60

Query: 62  FNSSGNETHNYAMPESEAEFERCVKPGLFFENVIFGILDRPGPKYFICNVGNHCNLGMKF 121
           FNSS N+THNYAMPES+ EF+ CVKPGLFFENVIF   DRPG KYFICNVGNHCNLGMKF
Sbjct: 61  FNSSANQTHNYAMPESQPEFDGCVKPGLFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF 120

Query: 122 GIQVLPIPGSIPPNAALKIASFPALLLLFITIITNFFF 160
            + VLP PG +PPN+ALKI +FP L  +    + NF F
Sbjct: 121 AVDVLPNPG-MPPNSALKIGAFPTLFFIATAFLPNFLF 157

[Close]

BLAST of Clc06G12240 vs. NCBI nr
Match: KAG6589838.1 (hypothetical protein SDJN03_15261, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 235.7 bits (600), Expect = 2.7e-58
Identity = 113/160 (70.62%), Postives = 128/160 (80.00%), Query Frame = 0


Query: 2   VSTQKMSSLPSLLFIAVFLQVVAAVDHRVGGDFGWNLPPTPTFFSEWARNTTFFVGDTLR 61
           + + + S L SLLFI   L   AAVDHRVGGDFGWNLPPTPTFFSEWA NTTF VGDTLR
Sbjct: 21  MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNTTFSVGDTLR 80

Query: 62  FNSSGNETHNYAMPESEAEFERCVKPGLFFENVIFGILDRPGPKYFICNVGNHCNLGMKF 121
           FNSS N+THNYAMPES+AEF+ CVKPG+FFENVIF   DRPG KYFICNVGNHCNLGMKF
Sbjct: 81  FNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF 140

Query: 122 GIQVLPIPGSIPPNAALKIASFPALLLLFITIITNFFFFL 162
            + VLP PG +PPN+ALKI + P L ++  TI+ N  FF+
Sbjct: 141 AVDVLPSPG-MPPNSALKIGAVPTLFMI-TTILPNLLFFI 178

[Close]

BLAST of Clc06G12240 vs. ExPASy Swiss-Prot
Match: P29602 (Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3)

HSP 1 Score: 85.5 bits (210), Expect = 6.0e-16
Identity = 46/123 (37.40%), Postives = 64/123 (52.03%), Query Frame = 0


Query: 28  HRVGGDFGWNLPPTPTFFSEWARNTTFFVGDTLRFNSSGNETHNYAMPESEAEFERC--V 87
           H VG + GW++P +P F+S+WA   TF VGD+L+FN   N  HN    E++  F+ C  V
Sbjct: 5   HIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPAN-AHNVHEMETKQSFDACNFV 64

Query: 88  KPGLFFENV--IFGILDRPGPKYFICNVGNHCNLGMKFGIQV--------LPIPGSIPPN 139
                 E    +   LD  G  YF+C VG HC+ G K  I V        +P P S PP+
Sbjct: 65  NSDNDVERTSPVIERLDELGMHYFVCTVGTHCSNGQKLSINVVAANATVSMPPPSSSPPS 124

[Close]

BLAST of Clc06G12240 vs. ExPASy Swiss-Prot
Match: Q07488 (Blue copper protein OS=Arabidopsis thaliana OX=3702 GN=BCB PE=2 SV=2)

HSP 1 Score: 81.6 bits (200), Expect = 8.7e-15
Identity = 53/139 (38.13%), Postives = 67/139 (48.20%), Query Frame = 0


Query: 13  LLFIAVFLQVVAAVDHRVGGDFGWNLPPTPTFFSEWARNTTFFVGDTLRFNSSGNETHNY 72
           L+F AV   VV A D+ VG D  W  P  P F++ WA   TF VGD L F+ +    H+ 
Sbjct: 13  LVFAAV---VVFAEDYDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGR-HDV 72

Query: 73  AMPESEAEFERCVKPGLFFENVIFGI---LDRPGPKYFICNVGNHCNLGMKFGIQVL--- 132
           A+  SEA FE C K        +  +   L+  GP+YFIC VG+HC  G K  I V+   
Sbjct: 73  AV-VSEAAFENCEKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVVAAG 132

Query: 133 ------------PIPGSIP 134
                       P PGS P
Sbjct: 133 ATGGATPGAGATPAPGSTP 146

[Close]

BLAST of Clc06G12240 vs. ExPASy Swiss-Prot
Match: P42849 (Umecyanin OS=Armoracia rusticana OX=3704 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.8e-13
Identity = 39/108 (36.11%), Postives = 56/108 (51.85%), Query Frame = 0


Query: 27  DHRVGGDFGWNLPPTPTFFSEWARNTTFFVGDTLRFNSSGNETHNYAMPESEAEFERCVK 86
           D+ VGGD  W  P  P F+  WA   TF VGD L F+ +    H+ A+   +A F+ C K
Sbjct: 2   DYDVGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAG-MHDVAVVTKDA-FDNCKK 61

Query: 87  PGLFFENV---IFGILDRPGPKYFICNVGNHCNLGMKFGIQVLPIPGS 132
                      +  +L+  GP+Y+IC VG+HC +G K  I V+   G+
Sbjct: 62  ENPISHMTTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAGGA 107

[Close]

BLAST of Clc06G12240 vs. ExPASy Swiss-Prot
Match: P80728 (Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.9e-10
Identity = 39/106 (36.79%), Postives = 55/106 (51.89%), Query Frame = 0


Query: 25  AVDHRVGGDFGWNLPPTPTFFSEWARNTTFFVGDTLRFNSSGNETHNYAMPESEAEFERC 84
           A  H+VG   GW     P  +++WA +  F VGD+L FN + N+ HN    + E +F+ C
Sbjct: 1   ATVHKVGDSTGWT-TLVPYDYAKWASSNKFHVGDSLLFNYN-NKFHNVLQVDQE-QFKSC 60

Query: 85  --VKPGLFFENVIFGI-LDRPGPKYFICNVGNHCNLGMKFGIQVLP 128
               P   + +    I L RPG  YF+C +  HC LG K  I+V P
Sbjct: 61  NSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDP 103

[Close]

BLAST of Clc06G12240 vs. ExPASy Swiss-Prot
Match: P00302 (Stellacyanin OS=Toxicodendron vernicifluum OX=4013 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.1e-04
Identity = 35/107 (32.71%), Postives = 46/107 (42.99%), Query Frame = 0


Query: 28  HRVGGDFGWNLPPTPTFFSE------WARNTTFFVGDTLRFNSSGNETHNYAMPESEAEF 87
           + VG   GW +P    FF +      WA N TF +GD L F       HN     ++  +
Sbjct: 3   YTVGDSAGWKVP----FFGDVDYDWKWASNKTFHIGDVLVFKYD-RRFHN-VDKVTQKNY 62

Query: 88  ERC--VKPGLFFENVIFGI-LDRPGPKYFICNVGNHCNLGMKFGIQV 126
           + C    P   +      I L   G KY+IC V  HC+LG K  I V
Sbjct: 63  QSCNDTTPIASYNTGBBRINLKTVGQKYYICGVPKHCDLGQKVHINV 103

[Close]

BLAST of Clc06G12240 vs. ExPASy TrEMBL
Match: A0A5D3C3B4 (Umecyanin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001000 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 6.1e-64
Identity = 118/161 (73.29%), Postives = 136/161 (84.47%), Query Frame = 0


Query: 1   MVSTQKMSSLPSLLFIAVFLQVVAAVDHRVGGDFGWNLPPTPTFFSEWARNTTFFVGDTL 60
           MVSTQK++ L S LFIAV L  VAA+D++VGGDFGWNLPPTPTFFSEWA N TFFVGDTL
Sbjct: 1   MVSTQKLTFLASFLFIAVLLPAVAAIDYQVGGDFGWNLPPTPTFFSEWASNKTFFVGDTL 60

Query: 61  RFNSSGNETHNYAMPESEAEFERCVKPGLFFENVIFGILDRPGPKYFICNVGNHCNLGMK 120
           RFNSS NETHNYAMP S+AE + CVKPG+ F   ++ +LDRPG KYFIC VGNHCNLGMK
Sbjct: 61  RFNSSANETHNYAMPGSQAELDGCVKPGIVFMGGVYPVLDRPGRKYFICEVGNHCNLGMK 120

Query: 121 FGIQVLPIPGSIPPNAALKIASFPALLLLFITIITNFFFFL 162
           F + V+PIPGS+PPNAALK+ +FP LLL+FITII NF FF+
Sbjct: 121 FAVDVMPIPGSMPPNAALKLDAFPMLLLIFITIIINFLFFI 161

[Close]

BLAST of Clc06G12240 vs. ExPASy TrEMBL
Match: A0A1S3B9D0 (umecyanin-like OS=Cucumis melo OX=3656 GN=LOC103487432 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 6.1e-64
Identity = 118/161 (73.29%), Postives = 136/161 (84.47%), Query Frame = 0


Query: 1   MVSTQKMSSLPSLLFIAVFLQVVAAVDHRVGGDFGWNLPPTPTFFSEWARNTTFFVGDTL 60
           MVSTQK++ L S LFIAV L  VAA+D++VGGDFGWNLPPTPTFFSEWA N TFFVGDTL
Sbjct: 1   MVSTQKLTFLASFLFIAVLLPAVAAIDYQVGGDFGWNLPPTPTFFSEWASNKTFFVGDTL 60

Query: 61  RFNSSGNETHNYAMPESEAEFERCVKPGLFFENVIFGILDRPGPKYFICNVGNHCNLGMK 120
           RFNSS NETHNYAMP S+AE + CVKPG+ F   ++ +LDRPG KYFIC VGNHCNLGMK
Sbjct: 61  RFNSSANETHNYAMPGSQAELDGCVKPGIVFMGGVYPVLDRPGRKYFICEVGNHCNLGMK 120

Query: 121 FGIQVLPIPGSIPPNAALKIASFPALLLLFITIITNFFFFL 162
           F + V+PIPGS+PPNAALK+ +FP LLL+FITII NF FF+
Sbjct: 121 FAVDVMPIPGSMPPNAALKLDAFPMLLLIFITIIINFLFFI 161

[Close]

BLAST of Clc06G12240 vs. ExPASy TrEMBL
Match: A0A0A0LZE7 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G348950 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 8.3e-61
Identity = 118/161 (73.29%), Postives = 134/161 (83.23%), Query Frame = 0


Query: 1   MVSTQKMSSLPSLLFIAVFLQVVAAVDHRVGGDFGWNLPPTPTFFSEWARNTTFFVGDTL 60
           MVSTQK++ L S LFIAV L  VAAVD++VGGDFGWNLPPTPTFFSEWA N TFFVGD L
Sbjct: 1   MVSTQKVTFLASFLFIAVLLPAVAAVDYQVGGDFGWNLPPTPTFFSEWASNKTFFVGDRL 60

Query: 61  RFNSSGNETHNYAMPESEAEFERCVKPGLFFENVIFGILDRPGPKYFICNVGNHCNLGMK 120
           RFNSS NETHNYAMP S+AE + CVKPG+ F   +F +LDRPG +YFIC VGNHCNLGMK
Sbjct: 61  RFNSSANETHNYAMPGSQAELDGCVKPGIVFVGNVFPVLDRPGRRYFICEVGNHCNLGMK 120

Query: 121 FGIQVLPIPGSIPPNAALKIASFPALLLLFITIITNFFFFL 162
           F I V+PI GS+PPNAALKI +FP +LLLFIT+ITNF F +
Sbjct: 121 FAIDVMPILGSMPPNAALKIDAFP-MLLLFITMITNFLFII 160

[Close]

BLAST of Clc06G12240 vs. ExPASy TrEMBL
Match: A0A6J1H9M4 (umecyanin-like OS=Cucurbita moschata OX=3662 GN=LOC111461385 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.3e-58
Identity = 113/160 (70.62%), Postives = 128/160 (80.00%), Query Frame = 0


Query: 2   VSTQKMSSLPSLLFIAVFLQVVAAVDHRVGGDFGWNLPPTPTFFSEWARNTTFFVGDTLR 61
           + + + S L SLLFI   L   AAVDHRVGGDFGWNLPPTPTFFSEWA NTTF VGDTLR
Sbjct: 1   MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNTTFSVGDTLR 60

Query: 62  FNSSGNETHNYAMPESEAEFERCVKPGLFFENVIFGILDRPGPKYFICNVGNHCNLGMKF 121
           FNSS N+THNYAMPES+AEF+ CVKPG+FFENVIF   DRPG KYFICNVGNHCNLGMKF
Sbjct: 61  FNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF 120

Query: 122 GIQVLPIPGSIPPNAALKIASFPALLLLFITIITNFFFFL 162
            + VLP PG +PPN+ALKI + P L ++  TI+ N  FF+
Sbjct: 121 AVDVLPSPG-MPPNSALKIGAVPTLFMI-TTILPNLLFFI 158

[Close]

BLAST of Clc06G12240 vs. ExPASy TrEMBL
Match: A0A6J1JI19 (cucumber peeling cupredoxin-like OS=Cucurbita maxima OX=3661 GN=LOC111485291 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 7.3e-57
Identity = 111/163 (68.10%), Postives = 126/163 (77.30%), Query Frame = 0


Query: 2   VSTQKMSSLPSLLFIAVFLQ---VVAAVDHRVGGDFGWNLPPTPTFFSEWARNTTFFVGD 61
           + + + S L SLLFI   LQ     AAVDHRVGGDFGWNLPPTPTFFSEWA NT+F VGD
Sbjct: 22  MGSTRSSFLASLLFIGALLQAAAAAAAVDHRVGGDFGWNLPPTPTFFSEWASNTSFSVGD 81

Query: 62  TLRFNSSGNETHNYAMPESEAEFERCVKPGLFFENVIFGILDRPGPKYFICNVGNHCNLG 121
           TLRFNSS N+THNY MPES+AEF+ CVKPG+FFENVIF   DRP  KYFICNVGNHC LG
Sbjct: 82  TLRFNSSANQTHNYGMPESQAEFDGCVKPGIFFENVIFVTFDRPARKYFICNVGNHCKLG 141

Query: 122 MKFGIQVLPIPGSIPPNAALKIASFPALLLLFITIITNFFFFL 162
           MKF + VLP PG +PPN+ALKI +FP L  +   I+ NF FF+
Sbjct: 142 MKFAVDVLPNPG-MPPNSALKIGAFPTLFFIATAILPNFLFFI 183

[Close]

BLAST of Clc06G12240 vs. TAIR 10
Match: AT5G20230.1 (blue-copper-binding protein )

HSP 1 Score: 81.6 bits (200), Expect = 6.2e-16
Identity = 53/139 (38.13%), Postives = 67/139 (48.20%), Query Frame = 0


Query: 13  LLFIAVFLQVVAAVDHRVGGDFGWNLPPTPTFFSEWARNTTFFVGDTLRFNSSGNETHNY 72
           L+F AV   VV A D+ VG D  W  P  P F++ WA   TF VGD L F+ +    H+ 
Sbjct: 13  LVFAAV---VVFAEDYDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGR-HDV 72

Query: 73  AMPESEAEFERCVKPGLFFENVIFGI---LDRPGPKYFICNVGNHCNLGMKFGIQVL--- 132
           A+  SEA FE C K        +  +   L+  GP+YFIC VG+HC  G K  I V+   
Sbjct: 73  AV-VSEAAFENCEKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVVAAG 132

Query: 133 ------------PIPGSIP 134
                       P PGS P
Sbjct: 133 ATGGATPGAGATPAPGSTP 146

[Close]

BLAST of Clc06G12240 vs. TAIR 10
Match: AT3G18590.1 (early nodulin-like protein 5 )

HSP 1 Score: 76.6 bits (187), Expect = 2.0e-14
Identity = 50/146 (34.25%), Postives = 78/146 (53.42%), Query Frame = 0


Query: 13  LLFIAVF--LQVVAAVDHRVGGDFGWNLPPTPTF---FSEWARNTTFFVGDTLRFNSSGN 72
           ++F+  F     V++ +  VGG+ GW +P + T    F++WA +  F VGDTLRF     
Sbjct: 10  VMFLVTFYMFSCVSSTEFEVGGENGWIVPKSKTLGDAFNQWASDNRFKVGDTLRF----K 69

Query: 73  ETHNYAMPESEAEFERC--VKPGLFF--ENVIFGILDRPGPKYFICNVGNHCNLGMKFGI 132
            T +  +  SE E+++C   KP L+   E+ +F  LDRPG  YFI  V  HC  G K  +
Sbjct: 70  YTKDSVLVVSEEEYKKCKATKPQLYSNNEDTVFK-LDRPGLFYFISGVSGHCEKGQKMIV 129

Query: 133 QVLPIPGSI---PPNAALKIASFPAL 147
           +V+    S    PP+++   +S  +L
Sbjct: 130 KVMETESSTESPPPSSSSSSSSSSSL 150

[Close]

BLAST of Clc06G12240 vs. TAIR 10
Match: AT1G48940.1 (early nodulin-like protein 6 )

HSP 1 Score: 73.2 bits (178), Expect = 2.2e-13
Identity = 48/144 (33.33%), Postives = 75/144 (52.08%), Query Frame = 0


Query: 5   QKMSSLPSLLFIAVFLQVVAAVDHRVGGDFGWNLPPTPT---FFSEWARNTTFFVGDTLR 64
           QK+  L   +   VF  +V+  +   GG+ GW +P +      F++WA    F VGDT+R
Sbjct: 4   QKIVLLSIFVCFYVF-SLVSCTEFEAGGENGWIIPQSSNQSDIFNQWASKNRFKVGDTIR 63

Query: 65  FNSSGNETHNYAMPESEAEFERC--VKPGLF--FENVIFGILDRPGPKYFICNVGNHCNL 124
           F    +      +  +E E+++C   KP L+   ++ +F  LDRPG  YFI  V  HC  
Sbjct: 64  FKYKKDS----VLVVTEDEYKKCQTTKPELYSNHDDTVFK-LDRPGLFYFISGVSGHCEQ 123

Query: 125 GMKFGIQVLPI---PGSIPPNAAL 139
           G K  I+V+ +   P S PP+++L
Sbjct: 124 GQKMIIKVMEVESTPQSPPPSSSL 141

[Close]

BLAST of Clc06G12240 vs. TAIR 10
Match: AT2G31050.1 (Cupredoxin superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 3.0e-10
Identity = 43/142 (30.28%), Postives = 65/142 (45.77%), Query Frame = 0


Query: 13  LLFIAVFLQVVAAVDHRVGGDFGWNLPPTPTFFSEWARNTTFFVGDTLRFNSSGNETHNY 72
           L+ +A+F   V    H+VG   GW +      +  WA   TF VGD+L F    N+  + 
Sbjct: 14  LILVALFGISVGGTVHKVGDSDGWTI--MSVNYETWASTITFQVGDSLVFKY--NKDFHD 73

Query: 73  AMPESEAEFERC--VKPGLFFE-NVIFGILDRPGPKYFICNVGNHCNLGMKFGIQVL--- 132
               +  ++E C   KP   +E      IL +PG ++FIC    HC++G K  I VL   
Sbjct: 74  VTEVTHNDYEMCEPSKPLARYETGSDIVILTKPGLQHFICGFPGHCDMGQKLQIHVLPAS 133

Query: 133 ------PIPGSIPPNAALKIAS 143
                 P+PG + P ++    S
Sbjct: 134 LGPVAAPVPGPVRPPSSFSSPS 151

[Close]

BLAST of Clc06G12240 vs. TAIR 10
Match: AT3G60270.1 (Cupredoxin superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 1.9e-09
Identity = 41/125 (32.80%), Postives = 63/125 (50.40%), Query Frame = 0


Query: 13  LLFIAVFLQVVAAVDHRVGGDFGWNLPPTPTFFSEWARNTTFFVGDTLRFNSSGNETHNY 72
           LL + V +  V AV  +VG + GW +      ++ W    TF VGDTL F      +H+ 
Sbjct: 11  LLLLLVAVPAVFAVTFQVGDNDGWTI---GVEYTSWVSEKTFRVGDTLEFKY--GPSHSV 70

Query: 73  AMPESEAEFERC--VKPGLFFENVIFGI-LDRPGPKYFICNVGNHCNLGMKFGIQVLPIP 132
           A+  ++A+++ C   +P   F +    I L + G  +F+C    HC+LGMK  +QVL   
Sbjct: 71  AV-VNKADYDGCETSRPTQSFSDGDTKIDLTKVGAIHFLCLTPGHCSLGMKLAVQVLAAV 129

Query: 133 GSIPP 135
              PP
Sbjct: 131 SLEPP 129

The following BLAST results are available for this feature:

BLAST of Clc06G12240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878652.1	1.5e-64	80.12	cucumber peeling cupredoxin-like [Benincasa hispida]	[more]
XP_008443975.1	1.3e-63	73.29	PREDICTED: umecyanin-like [Cucumis melo] >KAA0050145.1 umecyanin-like [Cucumis m...	[more]
XP_004151459.1	1.7e-60	73.29	umecyanin [Cucumis sativus] >KGN65341.1 hypothetical protein Csa_019841 [Cucumis...	[more]
XP_023516867.1	3.2e-59	70.89	umecyanin-like [Cucurbita pepo subsp. pepo]	[more]
KAG6589838.1	2.7e-58	70.63	hypothetical protein SDJN03_15261, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Clc06G12240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29602	6.0e-16	37.40	Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3	[more]
Q07488	8.7e-15	38.13	Blue copper protein OS=Arabidopsis thaliana OX=3702 GN=BCB PE=2 SV=2	[more]
P42849	4.8e-13	36.11	Umecyanin OS=Armoracia rusticana OX=3704 PE=1 SV=1	[more]
P80728	4.9e-10	36.79	Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1	[more]
P00302	1.1e-04	32.71	Stellacyanin OS=Toxicodendron vernicifluum OX=4013 PE=1 SV=1	[more]

BLAST of Clc06G12240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C3B4	6.1e-64	73.29	Umecyanin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G00100...	[more]
A0A1S3B9D0	6.1e-64	73.29	umecyanin-like OS=Cucumis melo OX=3656 GN=LOC103487432 PE=4 SV=1	[more]
A0A0A0LZE7	8.3e-61	73.29	Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G348950...	[more]
A0A6J1H9M4	1.3e-58	70.63	umecyanin-like OS=Cucurbita moschata OX=3662 GN=LOC111461385 PE=4 SV=1	[more]
A0A6J1JI19	7.3e-57	68.10	cucumber peeling cupredoxin-like OS=Cucurbita maxima OX=3661 GN=LOC111485291 PE=...	[more]

BLAST of Clc06G12240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20230.1	6.2e-16	38.13	blue-copper-binding protein	[more]
AT3G18590.1	2.0e-14	34.25	early nodulin-like protein 5	[more]
AT1G48940.1	2.2e-13	33.33	early nodulin-like protein 6	[more]
AT2G31050.1	3.0e-10	30.28	Cupredoxin superfamily protein	[more]
AT3G60270.1	1.9e-09	32.80	Cupredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 23..127 e-value: 2.4E-22 score: 81.2
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 24..126
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 39..119 e-value: 7.1E-11 score: 42.0
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 26..127 score: 23.272079
None	No IPR available	PANTHER	PTHR33021:SF360	OS08G0482600 PROTEIN	coord: 13..134
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 13..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G12240.1	Clc06G12240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009055	electron transfer activity