Clc06G11960 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G11960
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Cytochrome c oxidase subunit 1
Location	ClcChr06: 22376108 .. 22376413 (-)
RNA-Seq Expression	Clc06G11960
Synteny	Clc06G11960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATTTCTTAGGGCTTTCGGGTATGCCACGTCGCATTCCTGATTATCCAGATGCTTACGCTGGATGGAATGCCCTTAGCAGTTTTGGCTCTTATATATCCGTAGTTGGGATTCGTCGTTTCTTCGTGGTCGTAACAATCACTTCAAGCAGTGGAAATAACAAAAGATGTGCTCCAAGTCCTTGGGCTGTTGAACAGAATTCAACCACACTGGAATGGATGGTACAAAGTCCTCCAGCTTTTCATACTTTTGGAGAACTTCCTGCTATCAAAGAGACGAAAAGCTATGTGCGCCCCTTTCTCTAA

mRNA sequence

ATGCATTTCTTAGGGCTTTCGGGTATGCCACGTCGCATTCCTGATTATCCAGATGCTTACGCTGGATGGAATGCCCTTAGCAGTTTTGGCTCTTATATATCCGTAGTTGGGATTCGTCGTTTCTTCGTGGTCGTAACAATCACTTCAAGCAGTGGAAATAACAAAAGATGTGCTCCAAGTCCTTGGGCTGTTGAACAGAATTCAACCACACTGGAATGGATGGTACAAAGTCCTCCAGCTTTTCATACTTTTGGAGAACTTCCTGCTATCAAAGAGACGAAAAGCTATGTGCGCCCCTTTCTCTAA

Coding sequence (CDS)

ATGCATTTCTTAGGGCTTTCGGGTATGCCACGTCGCATTCCTGATTATCCAGATGCTTACGCTGGATGGAATGCCCTTAGCAGTTTTGGCTCTTATATATCCGTAGTTGGGATTCGTCGTTTCTTCGTGGTCGTAACAATCACTTCAAGCAGTGGAAATAACAAAAGATGTGCTCCAAGTCCTTGGGCTGTTGAACAGAATTCAACCACACTGGAATGGATGGTACAAAGTCCTCCAGCTTTTCATACTTTTGGAGAACTTCCTGCTATCAAAGAGACGAAAAGCTATGTGCGCCCCTTTCTCTAA

Protein sequence

MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPSPWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYVRPFL

Homology

[Close]

BLAST of Clc06G11960 vs. NCBI nr
Match: AMC32792.1 (cytochrome c oxidase subunit 1 [Croton texensis])

HSP 1 Score: 207.2 bits (526), Expect = 6.5e-50
Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1   MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS 60
           MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS
Sbjct: 430 MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS 489

Query: 61  PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYVR 99
           PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV+
Sbjct: 490 PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYVK 527

[Close]

BLAST of Clc06G11960 vs. NCBI nr
Match: YP_009913642.1 (cytochrome c oxidase subunit 1 [Luffa acutangula] >QLM02677.1 cytochrome c oxidase subunit 1 [Luffa acutangula])

HSP 1 Score: 207.2 bits (526), Expect = 6.5e-50
Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1   MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS 60
           MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS
Sbjct: 430 MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS 489

Query: 61  PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYVR 99
           PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV+
Sbjct: 490 PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYVK 527

[Close]

BLAST of Clc06G11960 vs. NCBI nr
Match: KAF3973005.1 (hypothetical protein CMV_003549 [Castanea mollissima])

HSP 1 Score: 207.2 bits (526), Expect = 6.5e-50
Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1   MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS 60
           MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS
Sbjct: 430 MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS 489

Query: 61  PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYVR 99
           PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV+
Sbjct: 490 PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYVK 527

[Close]

BLAST of Clc06G11960 vs. NCBI nr
Match: AKE34087.1 (cytochrome c oxidase subunit 1, partial [Fragaria vesca subsp. bracteata])

HSP 1 Score: 207.2 bits (526), Expect = 6.5e-50
Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1   MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS 60
           MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS
Sbjct: 430 MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS 489

Query: 61  PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYVR 99
           PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV+
Sbjct: 490 PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYVK 527

[Close]

BLAST of Clc06G11960 vs. NCBI nr
Match: QIS40616.1 (cytochrome c oxidase subunit 1 [Quercus variabilis])

HSP 1 Score: 207.2 bits (526), Expect = 6.5e-50
Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1   MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS 60
           MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS
Sbjct: 430 MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS 489

Query: 61  PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYVR 99
           PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV+
Sbjct: 490 PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYVK 527

[Close]

BLAST of Clc06G11960 vs. ExPASy Swiss-Prot
Match: P08743 (Cytochrome c oxidase subunit 1 OS=Oenothera berteroana OX=3950 GN=COX1 PE=3 SV=2)

HSP 1 Score: 195.3 bits (495), Expect = 3.4e-49
Identity = 91/98 (92.86%), Postives = 95/98 (96.94%), Query Frame = 0


Query: 1   MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS 60
           MHFLGLSGMPR IPDYP++YAGWNALSSFGSYISVVGIR FFVVVTITSSSGNNKRCAPS
Sbjct: 430 MHFLGLSGMPRPIPDYPESYAGWNALSSFGSYISVVGIRCFFVVVTITSSSGNNKRCAPS 489

Query: 61  PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYVR 99
           PWAVE+NSTTLEWMVQSPPAFHTFGELPA KETKSYV+
Sbjct: 490 PWAVEKNSTTLEWMVQSPPAFHTFGELPATKETKSYVK 527

[Close]

BLAST of Clc06G11960 vs. ExPASy Swiss-Prot
Match: P60620 (Cytochrome c oxidase subunit 1 OS=Arabidopsis thaliana OX=3702 GN=COX1 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 4.4e-49
Identity = 92/98 (93.88%), Postives = 94/98 (95.92%), Query Frame = 0


Query: 1   MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS 60
           MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGI  FFVVVTIT SSGNNKRCAPS
Sbjct: 430 MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPS 489

Query: 61  PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYVR 99
           PWA+E NSTTLEWMVQSPPAFHTFGELPAIKETKSYV+
Sbjct: 490 PWALELNSTTLEWMVQSPPAFHTFGELPAIKETKSYVK 527

[Close]

BLAST of Clc06G11960 vs. ExPASy Swiss-Prot
Match: P60621 (Cytochrome c oxidase subunit 1 OS=Raphanus sativus OX=3726 GN=COX1 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 4.4e-49
Identity = 92/98 (93.88%), Postives = 94/98 (95.92%), Query Frame = 0


Query: 1   MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS 60
           MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGI  FFVVVTIT SSGNNKRCAPS
Sbjct: 430 MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPS 489

Query: 61  PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYVR 99
           PWA+E NSTTLEWMVQSPPAFHTFGELPAIKETKSYV+
Sbjct: 490 PWALELNSTTLEWMVQSPPAFHTFGELPAIKETKSYVK 527

[Close]

BLAST of Clc06G11960 vs. ExPASy Swiss-Prot
Match: P14578 (Cytochrome c oxidase subunit 1 OS=Oryza sativa subsp. japonica OX=39947 GN=COX1 PE=3 SV=2)

HSP 1 Score: 191.4 bits (485), Expect = 4.9e-48
Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 0


Query: 1   MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS 60
           MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVV ITSSSG NKRCA S
Sbjct: 430 MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVAITSSSGKNKRCAES 489

Query: 61  PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKS 96
           PWAVEQN TTLEW+VQSPPAFHTFGELPAIKETKS
Sbjct: 490 PWAVEQNPTTLEWLVQSPPAFHTFGELPAIKETKS 524

[Close]

BLAST of Clc06G11960 vs. ExPASy Swiss-Prot
Match: P12786 (Cytochrome c oxidase subunit 1 OS=Pisum sativum OX=3888 GN=COX1 PE=3 SV=2)

HSP 1 Score: 190.3 bits (482), Expect = 1.1e-47
Identity = 91/98 (92.86%), Postives = 93/98 (94.90%), Query Frame = 0


Query: 1   MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS 60
           MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNN   A  
Sbjct: 430 MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNITRANI 489

Query: 61  PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYVR 99
           PWAVEQNSTTLEW+VQSPPAFHTFGELPAIKETKSYV+
Sbjct: 490 PWAVEQNSTTLEWLVQSPPAFHTFGELPAIKETKSYVK 527

[Close]

BLAST of Clc06G11960 vs. ExPASy TrEMBL
Match: A0A0B4L2F9 (Cytochrome c oxidase subunit 1 (Fragment) OS=Fragaria iinumae OX=64939 GN=cox1 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.2e-50
Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1   MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS 60
           MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS
Sbjct: 425 MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS 484

Query: 61  PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYVR 99
           PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV+
Sbjct: 485 PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYVK 522

[Close]

BLAST of Clc06G11960 vs. ExPASy TrEMBL
Match: A0A0B4L0K8 (Cytochrome c oxidase subunit 1 (Fragment) OS=Fragaria mandshurica OX=538574 GN=cox1 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.2e-50
Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1   MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS 60
           MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS
Sbjct: 425 MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS 484

Query: 61  PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYVR 99
           PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV+
Sbjct: 485 PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYVK 522

[Close]

BLAST of Clc06G11960 vs. ExPASy TrEMBL
Match: A0A0B4L0L2 (Cytochrome c oxidase subunit 1 (Fragment) OS=Fragaria vesca subsp. bracteata OX=157670 GN=cox1 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.2e-50
Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1   MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS 60
           MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS
Sbjct: 425 MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS 484

Query: 61  PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYVR 99
           PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV+
Sbjct: 485 PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYVK 522

[Close]

BLAST of Clc06G11960 vs. ExPASy TrEMBL
Match: A0A0B4L0I8 (Cytochrome c oxidase subunit 1 (Fragment) OS=Fragaria virginiana OX=101015 GN=cox1 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.2e-50
Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1   MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS 60
           MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS
Sbjct: 425 MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS 484

Query: 61  PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYVR 99
           PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV+
Sbjct: 485 PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYVK 522

[Close]

BLAST of Clc06G11960 vs. ExPASy TrEMBL
Match: F8T949 (Cytochrome c oxidase subunit 1 OS=Rubus coreanus OX=321593 GN=COI PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.2e-50
Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1   MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS 60
           MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS
Sbjct: 430 MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS 489

Query: 61  PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYVR 99
           PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV+
Sbjct: 490 PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYVK 527

[Close]

BLAST of Clc06G11960 vs. TAIR 10
Match: ATMG01360.1 (cytochrome oxidase )

HSP 1 Score: 194.9 bits (494), Expect = 3.1e-50
Identity = 92/98 (93.88%), Postives = 94/98 (95.92%), Query Frame = 0


Query: 1   MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVTITSSSGNNKRCAPS 60
           MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGI  FFVVVTIT SSGNNKRCAPS
Sbjct: 430 MHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPS 489

Query: 61  PWAVEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYVR 99
           PWA+E NSTTLEWMVQSPPAFHTFGELPAIKETKSYV+
Sbjct: 490 PWALELNSTTLEWMVQSPPAFHTFGELPAIKETKSYVK 527

The following BLAST results are available for this feature:

BLAST of Clc06G11960 vs. NCBI nr


Match Name	E-value	Identity	Description
AMC32792.1	6.5e-50	98.98	cytochrome c oxidase subunit 1 [Croton texensis]	[more]
YP_009913642.1	6.5e-50	98.98	cytochrome c oxidase subunit 1 [Luffa acutangula] >QLM02677.1 cytochrome c oxida...	[more]
KAF3973005.1	6.5e-50	98.98	hypothetical protein CMV_003549 [Castanea mollissima]	[more]
AKE34087.1	6.5e-50	98.98	cytochrome c oxidase subunit 1, partial [Fragaria vesca subsp. bracteata]	[more]
QIS40616.1	6.5e-50	98.98	cytochrome c oxidase subunit 1 [Quercus variabilis]	[more]

BLAST of Clc06G11960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P08743	3.4e-49	92.86	Cytochrome c oxidase subunit 1 OS=Oenothera berteroana OX=3950 GN=COX1 PE=3 SV=2	[more]
P60620	4.4e-49	93.88	Cytochrome c oxidase subunit 1 OS=Arabidopsis thaliana OX=3702 GN=COX1 PE=3 SV=1	[more]
P60621	4.4e-49	93.88	Cytochrome c oxidase subunit 1 OS=Raphanus sativus OX=3726 GN=COX1 PE=3 SV=1	[more]
P14578	4.9e-48	94.74	Cytochrome c oxidase subunit 1 OS=Oryza sativa subsp. japonica OX=39947 GN=COX1 ...	[more]
P12786	1.1e-47	92.86	Cytochrome c oxidase subunit 1 OS=Pisum sativum OX=3888 GN=COX1 PE=3 SV=2	[more]

BLAST of Clc06G11960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0B4L2F9	3.2e-50	98.98	Cytochrome c oxidase subunit 1 (Fragment) OS=Fragaria iinumae OX=64939 GN=cox1 P...	[more]
A0A0B4L0K8	3.2e-50	98.98	Cytochrome c oxidase subunit 1 (Fragment) OS=Fragaria mandshurica OX=538574 GN=c...	[more]
A0A0B4L0L2	3.2e-50	98.98	Cytochrome c oxidase subunit 1 (Fragment) OS=Fragaria vesca subsp. bracteata OX=...	[more]
A0A0B4L0I8	3.2e-50	98.98	Cytochrome c oxidase subunit 1 (Fragment) OS=Fragaria virginiana OX=101015 GN=co...	[more]
F8T949	3.2e-50	98.98	Cytochrome c oxidase subunit 1 OS=Rubus coreanus OX=321593 GN=COI PE=3 SV=1	[more]

BLAST of Clc06G11960 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG01360.1	3.1e-50	93.88	cytochrome oxidase	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036927	Cytochrome c oxidase-like, subunit I superfamily	GENE3D	1.20.210.10		coord: 1..98 e-value: 1.5E-26 score: 94.8
IPR036927	Cytochrome c oxidase-like, subunit I superfamily	SUPERFAMILY	81442	Cytochrome c oxidase subunit I-like	coord: 1..90
None	No IPR available	PANTHER	PTHR10422:SF18	CYTOCHROME C OXIDASE SUBUNIT 1	coord: 1..94
IPR000883	Cytochrome c oxidase subunit I	PANTHER	PTHR10422	CYTOCHROME C OXIDASE SUBUNIT 1	coord: 1..94
IPR023616	Cytochrome c oxidase-like, subunit I domain	PROSITE	PS50855	COX1	coord: 1..91 score: 12.152653

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G11960.1	Clc06G11960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0015990	electron transport coupled proton transport
biological_process	GO:0006119	oxidative phosphorylation
biological_process	GO:0009060	aerobic respiration
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0045277	respiratory chain complex IV
molecular_function	GO:0004129	cytochrome-c oxidase activity
molecular_function	GO:0020037	heme binding
molecular_function	GO:0046872	metal ion binding