Clc06G10890 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTTCTGAATTCAACAGGGAAGTCAATAAGGCATTCTGTGGTTTCTTCGATCAATCAAAATTTAATCAGTATGAGAGTCTATTCTTAGAAAGTGGGGAAGATGTCACGGACCATACTGACACGTCAAGAAACAATCTCCCGGTAAAATTTCTTTCTTTTTTGTTTTGTATTTTGACATTATACTCAAATGATAAGTTAAGAACCTTATAGTTAGGATAATGATCATAATTAGCACTCTTAGATGATCCCCATTTTAAGTTTAGTTTCAAACTTTCTTATTAAAATGATTTTTCGTTACAACATGCTTTATGCTCATCAAATGCACATAAATTATTTGTTCTCCTGTTCCTAGTTTGCTTGCTTGGGTTTCTTCTTTATGGTGCTATTATTTTAGGTGCATGAATCTACCTCGGATAGTAGAGAGAATTATTTTGGTACATCTCTCACTCCAGAACGCTTGGATCACAAAGATGATATTGGGATTGCAACAGGCAATTGGGGTTGTGGTGCCTTTGGAGGAGATCCTCAAGTGAAGTCCATAATACAATGGCTTGCTGCTTCTCAGGTACCTTTCAAGTGTTTGTATGATTCCACATGCACAACATATTTCATAAGGGTAGTGATAAATAGCCTTTGAAACGATAAAAAGTACGTTTATCCTGTTAAAACGCTTTTCAAAATGTTCAATGTTTATCTTCCAGGGGAAGTGCTTATAAAAGAATTGCTTTCACTTAAAAACACAATCATTAAACTCATCCGTACACTTAGATTCATTTTCCTTACTAGTACCCACAAACAACCTTATTTTATCTACTTATGTTCTGCACATCCTTAGTTACCTTCCAATTTGGATAGTATTGAAAATAAAACAAGATTTTTGGGGATATTGTAAATTTTATTTTTTTCCTTTTATATTTCTTAATATTTTTTCTTTTATAGATTTGGAGTCTATTTATTTTTCCTCCTCTTGTAACATTGAGTGTATCAAATTAATAAAAAGAGAATTTCTATCATGGTTTTTTCTCCCTGTACTAGGGTTTTCCACATAAAGCTCGTGTTCTTTTTCTTCTCTTCGTTTTCAATATGGTATCAGAGAGTGGTAACGAAACCCTAGAAACCCTAGCCGTCGTCGACAACAACCAACCACTACAAGGAACAGAACCCTAGATCTGCTACTGTTTCCACCGCCGATGGAACCCACCGCCGTCAACCGGTACCTAGTGTCATTGAACCCTAACTCTGCCGCTACTACCATCCAAGACACCGTGGATCGGGAACTTTTGGCCAGATCGACAGCAACTGGACCGTTGAATCGACCTTCCTCCTCAAACCTGAGTGCCGTCGCCGTTGTTATCTAAGACACCATGTACTGAGAGCTTCTGACAAGATCGGCAACAGCTGGACTCTCAAGTCGACCTTCCTCCTCGTATGTCGCTGGGTCTGCCGTCAAATCTGTCTTCTCCAACCGTGTGGGAGCTGCGAATCTACCAGCAGCCGCTGGGGGTTTTTCCGCAACCGCCGTCAGTGGTTTTTCCGGCACTTATCCCCTGCCTCCGATCAATGTTGTAGCTGCCGGAACTTCTACCTATGCTGCTGGCACCTCACCTCCCTACCATGAGGAAAAGAATGGAGTCTTTTTTAGGTGTAACTTCCAGCACGATTCAACAGCAATTTGTCAATCTTCAAGCAAATTTTCAACAACAAATCGCTGCTCTTGGGGCAGCCCTTGCCGCTTCGACCAGTAAATTCAGGTATCCAGTCAGATCTACTGATGTATCCAAAGAATCCGGTAACTGTTTTCCCTACCTTAACTACTGCACCCCTATATGTCTGGACCAATGGGCAACTCCAGAGAACTAATCGTTGGTGAAAAGTTAAATGGTCAGAATTATTTCTCCTTGTTTCAATCCGTTAAAATGGTACTTAAGGGACGCCACAAATTTGGGTATCTAACCGGTGAGATACCGAAACCTAGACCAGGAGATCCTCAGGAGCACATTTGGAAAGGAGAGGATTCTTTACTCCGTTCTCTGTTGATCCACAATATGGAACCTCAAATTGGAAAACCTCTACTGTATGCTGCAACTGCTCGAGATATCTGGGATGTTGTTTAGAAATTATATTCCAAGAGACAGAATGCATCGCGGCTTTACACTCTGCGGAAACAAATTCACAAATGCAAACAAGGGAGTATGGATGTCACGTCATATTTTAACAAGTTGTCTCTTATTTGGCAGGAGATGGATTTGTGTCGAGAACTTATCTGGGACTGTCTGTGGGGGAGTTCAATATTATAAACTTGAGGAAATTGATCGTGTGTATGTTTTTTAGCAGGTTTGAATTCCAAGTTTGATGTTGTACGAGGTCGAATACTGGGACAGGGACCGATACCGACCCTAATGGAAGTCTGTTCTGAGGTTCGTCATGAGGAAGACAGATCAAGTGCTATGAATATCATAGTCACTTCCGTGACTGACTCTGCCGCCTTCAGTACTAAATCATTTGGTACCACTAGAGACAAGCAGAACGAGAAACCACCCCTGGTATGGGAACACTACAAGAAACCTTGGCATACGAAGGATCAATGTTAGAAGTTACATGGTCGGCCCCCAAATGGCAGATGACGACCTCCAAACAACAAGCCTAACTCTAGCCAGACTATGGTGAGTGAAATTGCTAGTGGCTCCCAGTCACAATCCCAGGAGAATTGTCTAGCTGACACCAGTGCCTCCTCTCTTGGGGCAATTGCCCAATCAGGTACATCTCATTCCTTAAGTCTCCTCAGTATTACTGGTAAGAAGCCCTGGATTCTTGATTCAAGAGCTACATATCATTTGACTAGATCGTCTAACAACTTTCTCTCATATCATCCATGTGCTGGGAAAAAATTCGAATTGCTTATGGAACCTTTGCTCCTGTTGCGAGCAAGGGTCGCATTTCTCCTTTTGATGGTCTGATATTACAGAATATGCTGCACGTCCCTAAAATATCTTACAATTTATTGTCTATGAGTAAGATAACTAGAGATCTAAACTGTCGTGTAGCGTTCTCACCAAATGATGTTGTTTTACAGGACTTGAGCTCGGGGGAGATGATTGGCACTGCCCGGCACAATAGGGGACTCTATTTTCTTGATGATGATACTTCCTTCCTCTAGGCATAGTTATAGGACTAGTTTGTTGTCTTCCTATTTCTCAACTTCCGAAAATGATTGTATGTTGTGGCATTTTTGTCTTGGTCATCCTAATTCCAATATATGAAATATTTATTTCCTCATTTGTTCAATAAGGTTGACATCTCTTCCTTGTCCTCAACATAGGTCTCTTTTCCGTCCCAACCATACAAACCATCTTAACTTTTCACTCTTATTCACAGTGATGTTTGGGGTCCCTCAAGGGTTCTTCCTCTTTAGAATAGCAACCTTACTGAGATTGACCTTTTTGTAAACAGAGTGTGATCAGAGTGAGGTTGACATCTCTTCCTTGTCCTCAACATAGGTCTCTTTTCCGTCCCAACCATACAAACCATCTTAACTTTTCACTCTTATTCACAGTGATGTTTGGGGTCCCTCAAGGGTTCTACCTCTTTAGGTAAGCGTTGGTTCATGACCTTCATCGATGACCACACTCGCCTTACTTGGGTTTTTCTTCTCACAAATAAGTCTAAGGTGTCATCCATTTTCCAACAATTTTATACTACCATCGAGACTTAGTTCAATGCCACAATTGTCATCATTCGGAGTGACAATGGCCGTGAATTCCTTACTCAGGGACACTCTGATCACACTCTGTTTACAAAAAGGTCAATCTCAGTAAGGTTGCTATTCTAATTGTGTATGTTGATGACATTGTTCTATCAAGAGATGATACTATTGAAATCAACAAGCTAAAACAGAAAATGGCGGATGAATTGAAATCAAAGACCTAGGAAACCTAAAGTACTTTCTTGGGATGGAGGTGGCAAGGTCAAGAGAAGGGATTTCAGTTTCACAATGGAAATACACTATTGATCTTCTGAAAGAAACAGGTATGACTGGATGCAGGCCTACTGACACCCCTATTGAGTCTAATGCCAAATTGGGAGAGTCTGTTGACAAAGTTCCTGTTAATAAAGAAATATACCAATGTCTAGTTGGAAGACTAATTTACTTAGCTCACACTAAACCAGACATTTCCGATGCTGTTAGTGTTGTTAGTCAGTTTATGCAGGCTCCCTATGAAGAACACATGGAAGCTGTTAAATGGATTCTGAGATATTTGAAAAGCACTCCAGGAAAAGGTTTGATGTTTAGAAAATCCGACAGGAAATGCATTGAAGCCTATGCCGATTTTGACTGGGCAGGATCAGTGATTGACAGAAAATCTACATTTGGGTACTGTACCTTTGTTTGGGGTAATCTTGTAACATGGAGAAGTAAGAAGCAAAGTGTGGTTGCTAGAAGCAGTGCTGAAGCTGAATACAAAGCTATGAGTCAAGACATTTGTGAAGAAATCTGGTTGCAGAAAGTTCTATCTGATCTTCACCAAGACAATGACTTACCAATGAAACTCTATTGTGATAATAAGGTTGCTATTAGCATTGCAAATAATCCAGTTCAACATGACAAAACAAAACATGTGGAGATTGATAGACACTTCATACAGGAGAAACTAGAAAATGGAAGTATCTGTATTCCTTATATTCCTTCTAGCCAACAAGTTGTTGATATTCTCGCCAAAGGGTTACTTAACCAGATGTTTGACTCGTGTTAGCAAGATGGGCCTCACTAATATCTACGTCTCATCTTGAGGGGGAGTGTTGAAAATAAAAGAAGATTTTTTATATTCCCTAATATATTTTCTTTTTATAGATTTGGAGTCTATTTATTTTTTTTCCTTTTGTAACATTGAGTGTATCAAATTAATAAAAAGAGAATTTCCATCGTGGTTTTTTCTCCCTGTACTAGGATTTTCCACATAAACCTTGTGTTCTTTTTCTTCTCTTATTTTTCAATAGATAGCTTTAGCTTTTTTTCTTCATCGATACACACCTCATATGAAGCATGGACATAAACAAGCATGTTAATATGTGGAAAGTAGAGAATCCCTAGTATGATCCTCCAAAATTTTTTCCACTTTCTTGGTTTTAAGTTTTCTTTCTTAAAAGGAAATAAGGCTTTTTCATTGAATAAATGAAAATAAGCTAATCCTCAAAATATTAGGGGAAAAAAACTTGTCAAGTACACTTGGAGCAATACATAGAACAACAAGATAATAACCAAGTATATGGTTTTAAGTTTTCTTAATAACGGAGTATATGTTTTACAGGCATTAAGACCTTTCGTCTTGTATTACACATTTGGCACCAAAGCACTGCAGCACCTAGAAAAGGTATGAACCCCATTCATCTTTTGGAAGTTTCTGCAGAGTCCTTAATGTAAGAGGCCTATTGTATACAATGTTGAAACTTACGAAATTTATTAGATACAAAATCAAAGATTTAAGGGTGTTGTAAGAAACTTTCAAAAGGTTCAAGAACCATATTGTAAACACAAATCTAGAAGTTAGCTAACTACTTTAAAACCTGTTTATGAATGTGTCCCTCAAACCTAAAGTTTTAGAATGTGTACTGAAGGTTTTGTTATGCAAACTTCAATTAAAGAAAAAAAGTTTGAAATGTTTGAATATGATTCTTTCGTTGGATGTTTTGGACAGGTGAGTGAATGGATTTTGGCACACAAATGGACAGTTGGTGATCTATGGAGTATGTTGGTGGAGTATTCTTCTCAAATATCAAAGGGACAAACACATATTGGTTTCTTTGATTGGCTCCTCCCAGCCTCCTCCAAAACTAACTCATGTTGTTTCTCTTGA ATGCTTTCTGAATTCAACAGGGAAGTCAATAAGGCATTCTGTGGTTTCTTCGATCAATCAAAATTTAATCAGTATGAGAGTCTATTCTTAGAAAGTGGGGAAGATGTCACGGACCATACTGACACGTCAAGAAACAATCTCCCGGTGCATGAATCTACCTCGGATAGTAGAGAGAATTATTTTGGTACATCTCTCACTCCAGAACGCTTGGATCACAAAGATGATATTGGGATTGCAACAGGCAATTGGGGTTGTGGTGCCTTTGGAGGAGATCCTCAAGTGAAGTCCATAATACAATGGCTTGCTGCTTCTCAGGCATTAAGACCTTTCGTCTTGTATTACACATTTGGCACCAAAGCACTGCAGCACCTAGAAAAGGTGAGTGAATGGATTTTGGCACACAAATGGACAGTTGGTGATCTATGGAGTATGTTGGTGGAGTATTCTTCTCAAATATCAAAGGGACAAACACATATTGGTTTCTTTGATTGGCTCCTCCCAGCCTCCTCCAAAACTAACTCATGTTGTTTCTCTTGA ATGCTTTCTGAATTCAACAGGGAAGTCAATAAGGCATTCTGTGGTTTCTTCGATCAATCAAAATTTAATCAGTATGAGAGTCTATTCTTAGAAAGTGGGGAAGATGTCACGGACCATACTGACACGTCAAGAAACAATCTCCCGGTGCATGAATCTACCTCGGATAGTAGAGAGAATTATTTTGGTACATCTCTCACTCCAGAACGCTTGGATCACAAAGATGATATTGGGATTGCAACAGGCAATTGGGGTTGTGGTGCCTTTGGAGGAGATCCTCAAGTGAAGTCCATAATACAATGGCTTGCTGCTTCTCAGGCATTAAGACCTTTCGTCTTGTATTACACATTTGGCACCAAAGCACTGCAGCACCTAGAAAAGGTGAGTGAATGGATTTTGGCACACAAATGGACAGTTGGTGATCTATGGAGTATGTTGGTGGAGTATTCTTCTCAAATATCAAAGGGACAAACACATATTGGTTTCTTTGATTGGCTCCTCCCAGCCTCCTCCAAAACTAACTCATGTTGTTTCTCTTGA MLSEFNREVNKAFCGFFDQSKFNQYESLFLESGEDVTDHTDTSRNNLPVHESTSDSRENYFGTSLTPERLDHKDDIGIATGNWGCGAFGGDPQVKSIIQWLAASQALRPFVLYYTFGTKALQHLEKVSEWILAHKWTVGDLWSMLVEYSSQISKGQTHIGFFDWLLPASSKTNSCCFS Homology
BLAST of Clc06G10890 vs. NCBI nr
Match: XP_008441672.1 (PREDICTED: poly(ADP-ribose) glycohydrolase 1-like isoform X3 [Cucumis melo]) HSP 1 Score: 330.9 bits (847), Expect = 6.9e-87 Identity = 154/172 (89.53%), Postives = 161/172 (93.60%), Query Frame = 0
BLAST of Clc06G10890 vs. NCBI nr
Match: XP_008441668.1 (PREDICTED: poly(ADP-ribose) glycohydrolase 1-like isoform X1 [Cucumis melo] >XP_008441669.1 PREDICTED: poly(ADP-ribose) glycohydrolase 1-like isoform X1 [Cucumis melo] >XP_008441670.1 PREDICTED: poly(ADP-ribose) glycohydrolase 1-like isoform X1 [Cucumis melo] >XP_008441671.1 PREDICTED: poly(ADP-ribose) glycohydrolase 1-like isoform X1 [Cucumis melo]) HSP 1 Score: 330.9 bits (847), Expect = 6.9e-87 Identity = 154/172 (89.53%), Postives = 161/172 (93.60%), Query Frame = 0
BLAST of Clc06G10890 vs. NCBI nr
Match: XP_008441675.1 (PREDICTED: poly(ADP-ribose) glycohydrolase 1-like isoform X4 [Cucumis melo]) HSP 1 Score: 330.9 bits (847), Expect = 6.9e-87 Identity = 154/172 (89.53%), Postives = 161/172 (93.60%), Query Frame = 0
BLAST of Clc06G10890 vs. NCBI nr
Match: XP_022928764.1 (poly(ADP-ribose) glycohydrolase 1-like [Cucurbita moschata]) HSP 1 Score: 325.5 bits (833), Expect = 2.9e-85 Identity = 152/172 (88.37%), Postives = 163/172 (94.77%), Query Frame = 0
BLAST of Clc06G10890 vs. NCBI nr
Match: KAG7017163.1 (Poly(ADP-ribose) glycohydrolase 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 325.5 bits (833), Expect = 2.9e-85 Identity = 152/172 (88.37%), Postives = 163/172 (94.77%), Query Frame = 0
BLAST of Clc06G10890 vs. ExPASy Swiss-Prot
Match: Q9SKB3 (Poly(ADP-ribose) glycohydrolase 1 OS=Arabidopsis thaliana OX=3702 GN=PARG1 PE=1 SV=2) HSP 1 Score: 175.3 bits (443), Expect = 6.4e-43 Identity = 85/183 (46.45%), Postives = 122/183 (66.67%), Query Frame = 0
BLAST of Clc06G10890 vs. ExPASy Swiss-Prot
Match: Q8VYA1 (Probable poly(ADP-ribose) glycohydrolase 2 OS=Arabidopsis thaliana OX=3702 GN=PARG2 PE=2 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 7.8e-33 Identity = 77/165 (46.67%), Postives = 105/165 (63.64%), Query Frame = 0
BLAST of Clc06G10890 vs. ExPASy Swiss-Prot
Match: Q86W56 (Poly(ADP-ribose) glycohydrolase OS=Homo sapiens OX=9606 GN=PARG PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.9e-11 Identity = 33/75 (44.00%), Postives = 55/75 (73.33%), Query Frame = 0
BLAST of Clc06G10890 vs. ExPASy Swiss-Prot
Match: O02776 (Poly(ADP-ribose) glycohydrolase OS=Bos taurus OX=9913 GN=PARG PE=1 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 6.4e-11 Identity = 32/75 (42.67%), Postives = 55/75 (73.33%), Query Frame = 0
BLAST of Clc06G10890 vs. ExPASy Swiss-Prot
Match: O46043 (Poly(ADP-ribose) glycohydrolase OS=Drosophila melanogaster OX=7227 GN=Parg PE=1 SV=3) HSP 1 Score: 65.9 bits (159), Expect = 5.4e-10 Identity = 35/80 (43.75%), Postives = 48/80 (60.00%), Query Frame = 0
BLAST of Clc06G10890 vs. ExPASy TrEMBL
Match: A0A1S3B4L4 (Poly(ADP-ribose) glycohydrolase OS=Cucumis melo OX=3656 GN=LOC103485752 PE=3 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 3.3e-87 Identity = 154/172 (89.53%), Postives = 161/172 (93.60%), Query Frame = 0
BLAST of Clc06G10890 vs. ExPASy TrEMBL
Match: A0A1S3B3Y9 (Poly(ADP-ribose) glycohydrolase OS=Cucumis melo OX=3656 GN=LOC103485752 PE=3 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 3.3e-87 Identity = 154/172 (89.53%), Postives = 161/172 (93.60%), Query Frame = 0
BLAST of Clc06G10890 vs. ExPASy TrEMBL
Match: A0A1S3B3H5 (Poly(ADP-ribose) glycohydrolase OS=Cucumis melo OX=3656 GN=LOC103485752 PE=3 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 3.3e-87 Identity = 154/172 (89.53%), Postives = 161/172 (93.60%), Query Frame = 0
BLAST of Clc06G10890 vs. ExPASy TrEMBL
Match: A0A6J1ELT0 (Poly(ADP-ribose) glycohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111435589 PE=3 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 1.4e-85 Identity = 152/172 (88.37%), Postives = 163/172 (94.77%), Query Frame = 0
BLAST of Clc06G10890 vs. ExPASy TrEMBL
Match: A0A6J1HZ54 (Poly(ADP-ribose) glycohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111468979 PE=3 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 1.7e-83 Identity = 152/172 (88.37%), Postives = 161/172 (93.60%), Query Frame = 0
BLAST of Clc06G10890 vs. TAIR 10
Match: AT2G31870.2 (Poly (ADP-ribose) glycohydrolase (PARG) ) HSP 1 Score: 176.4 bits (446), Expect = 2.0e-44 Identity = 84/182 (46.15%), Postives = 124/182 (68.13%), Query Frame = 0
BLAST of Clc06G10890 vs. TAIR 10
Match: AT2G31870.1 (Poly (ADP-ribose) glycohydrolase (PARG) ) HSP 1 Score: 175.3 bits (443), Expect = 4.5e-44 Identity = 85/183 (46.45%), Postives = 122/183 (66.67%), Query Frame = 0
BLAST of Clc06G10890 vs. TAIR 10
Match: AT2G31865.1 (poly(ADP-ribose) glycohydrolase 2 ) HSP 1 Score: 141.7 bits (356), Expect = 5.5e-34 Identity = 77/165 (46.67%), Postives = 105/165 (63.64%), Query Frame = 0
BLAST of Clc06G10890 vs. TAIR 10
Match: AT2G31865.2 (poly(ADP-ribose) glycohydrolase 2 ) HSP 1 Score: 138.7 bits (348), Expect = 4.7e-33 Identity = 75/165 (45.45%), Postives = 104/165 (63.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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