Clc06G09975 (gene) Watermelon (cordophanus) v2

Overview
NameClc06G09975
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
LocationClcChr06: 13725550 .. 13726796 (+)
RNA-Seq ExpressionClc06G09975
SyntenyClc06G09975
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAAGAAAATCGAAGAACAGGTGGATGCTATGGTTCGTGAGATTGAAGGAATCAAAGAGAGTGCGAGGAAGATACGTCATATCGAAAGTACATTGGTTAGCTTGACCAAGAGTGTGGAGAAGTTGAGCATTCAACTGGATCAGCAATAGAGGAGTGCAGAAGAGATTCAGAAAATATGAGCAATCATGATTTTGGCTGAGTGGCCTCTTTTCCTGCGATGTAGCACAGTATTAGGGGACAGTGAAGCAAAGCCGCAATTGAAACCGAAATCATAAGTTATTCGCAAATTGTTGATGTTTCGGGCTTGAAGAAGTCCTTGGTGCAGGGCAGTGGAGGCGATGGTGCTTCCATTGGAGGGGGAACTTGAGTGAGGAAGATGAAGAAGAAAACAAGGAGGAGACGAGTAAGAAGAAACAACCAGCAGAAAAGAGACGACGCAAAGGGGGAGAGAAGGCAACAACAGAAATATGGTCGAAGTTACAACAAATCCATCAGGTCAATCAGAAGAAGAGTGTGCAAATGATGAAAAAAGCAAAAGTCCGAGAGTGGAGAAAGAGAAAAATATCGCCAGAAAAGCTTGTTGACAGTCGGAAGAAGAAACAACAAACGACAACATGGTCAGAGATGGAGTTGTGGAGAAGGCGCCGTTGCAACTTTCATGAGAAGGTGATGAGGAAATTGGAGATCAGCAGGCCTGAAGAAATCAACGAGGAAGATCATCTACGATTGCTTGTGTGGATGGAGATGAAGACTGGGGTGAAGAAGAGGTGTTGTTCAAAGAAGCGAATGATGGTGGGCTTCGAGGGAGAAAGAAGACGTTGGTGATTCATGGCCTGCAATGCCAAAGAGTTTGGCGGATTGAATCACTGATAATAATGTTAGTGAATTGCGTGAAGAGAAGGGAAAACACGTTACTGCCCACGTGAAGTGTTAGAAGGTGGAACCGGTTGTTGGAAAAAGATGCAGTTTTAATTTTTGTGGGAATTATGGGCTGGAATTACATGAAGAGAAGCCCAGTTCATTTTGTTAAAGTCAGCAAGTGATTTTTCAGACCTTTTCCCTGTTGTTCAAGTGGAACAAAGGAGCTTATGTTCTTGGGCTGCTTTATGGGCTGAAGAAAGATGATTCTGGGCTATGGGCTGAAATCAAGGGAATTAATTGGAGCCAAGAGCTTTCCAAAGCTGAAGGGAATAATTTCATTTCCAAAATTGAAGAGCAGACTGCTGGGGTTCTATTTTATTAA

mRNA sequence

ATGGCAAAGAAAATCGAAGAACAGGTGGATGCTATGGTTCGTGAGATTGAAGGAATCAAAGAGAGTGCGAGGAAGATACGTCATATCGAAAGGCAGTGGAGGCGATGGTGCTTCCATTGGAGGGGGAACTTGAGTGAGGAAGATGAAGAAGAAAACAAGGAGGAGACGAGTAAGAAGAAACAACCAGCAGAAAAGAGACGACGCAAAGGGGGAGAGAAGGCAACAACAGAAATATGGTCGAAGTTACAACAAATCCATCAGGTCAATCAGAAGAAGAGTGTGCAAATGATGAAAAAAGCAAAAGTCCGAGAGTGGAGAAAGAGAAAAATATCGCCAGAAAAGCTTGTTGACAGTCGGAAGAAGAAACAACAAACGACAACATGGTCAGAGATGGAGTTGTGGAGAAGGCGCCGTTGCAACTTTCATGAGAAGGTGATGAGGAAATTGGAGATCAGCAGGCCTGAAGAAATCAACGAGGAAGATCATCTACGATTGCTTGTGTGGATGGAGATGAAGACTGGGGTGAAGAAGAGGTGTTGTTCAAAGAAGCGAATGATGTGGAACAAAGGAGCTTATGTTCTTGGGCTGCTTTATGGGCTGAAGAAAGATGATTCTGGGCTATGGGCTGAAATCAAGGGAATTAATTGGAGCCAAGAGCTTTCCAAAGCTGAAGGGAATAATTTCATTTCCAAAATTGAAGAGCAGACTGCTGGGGTTCTATTTTATTAA

Coding sequence (CDS)

ATGGCAAAGAAAATCGAAGAACAGGTGGATGCTATGGTTCGTGAGATTGAAGGAATCAAAGAGAGTGCGAGGAAGATACGTCATATCGAAAGGCAGTGGAGGCGATGGTGCTTCCATTGGAGGGGGAACTTGAGTGAGGAAGATGAAGAAGAAAACAAGGAGGAGACGAGTAAGAAGAAACAACCAGCAGAAAAGAGACGACGCAAAGGGGGAGAGAAGGCAACAACAGAAATATGGTCGAAGTTACAACAAATCCATCAGGTCAATCAGAAGAAGAGTGTGCAAATGATGAAAAAAGCAAAAGTCCGAGAGTGGAGAAAGAGAAAAATATCGCCAGAAAAGCTTGTTGACAGTCGGAAGAAGAAACAACAAACGACAACATGGTCAGAGATGGAGTTGTGGAGAAGGCGCCGTTGCAACTTTCATGAGAAGGTGATGAGGAAATTGGAGATCAGCAGGCCTGAAGAAATCAACGAGGAAGATCATCTACGATTGCTTGTGTGGATGGAGATGAAGACTGGGGTGAAGAAGAGGTGTTGTTCAAAGAAGCGAATGATGTGGAACAAAGGAGCTTATGTTCTTGGGCTGCTTTATGGGCTGAAGAAAGATGATTCTGGGCTATGGGCTGAAATCAAGGGAATTAATTGGAGCCAAGAGCTTTCCAAAGCTGAAGGGAATAATTTCATTTCCAAAATTGAAGAGCAGACTGCTGGGGTTCTATTTTATTAA

Protein sequence

MAKKIEEQVDAMVREIEGIKESARKIRHIERQWRRWCFHWRGNLSEEDEEENKEETSKKKQPAEKRRRKGGEKATTEIWSKLQQIHQVNQKKSVQMMKKAKVREWRKRKISPEKLVDSRKKKQQTTTWSEMELWRRRRCNFHEKVMRKLEISRPEEINEEDHLRLLVWMEMKTGVKKRCCSKKRMMWNKGAYVLGLLYGLKKDDSGLWAEIKGINWSQELSKAEGNNFISKIEEQTAGVLFY
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 2..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..75

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc06G09975.1Clc06G09975.1mRNA