Clc06G09690 (gene) Watermelon (cordophanus) v2

Overview
NameClc06G09690
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Descriptiontransmembrane protein 234 homolog
LocationClcChr06: 12859951 .. 12862752 (-)
RNA-Seq ExpressionClc06G09690
SyntenyClc06G09690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAGAGACTGGGGAAGAAGATGATAGGAGATGTAGAGAAAATGGTCGCGATCGGTCTCGTCTGGGGCGCCACCAACGCTCTGATGCGCCGTGGCGCCCTTCTCTGGGATCAAGCTCTCAGTTCTTCCTCCAATTCAACCAAATTCCTCTCCTCCCTCCGTCGATGGCTCAAGCTCCTCTCTATCTGGCAATACACTCTCCCCTTTTTGCTTAATCTCACCGCCTCCGCTACCTTCTTTGCCATTCTAAGCAATGCCCCAATATCGCTCGCCGTTCCGGTCACCAACGCCACTACTTTTGCTGCCACCGCCGTGTTCGGAATGCTCCTAGGCGAGGACACTCGTGTCGGGTACGCTCTGTTTGGTACTGCTCTCATTGGTTTGGGCGTATGGCTTTGCATTAACTAATTGTAATTTTTGAATTGGAGAACTTAGGTTTTAGAGGTTGATTTGTAATCGGTTTGCTTATCATTCTTTTCTTGTAATTTTCCACATTCCTGAGATTTATGATATGAATCTGTCCAATGTGGGCACTCTTGAATTACTCTGTGATTAAGTGTAGTAAAATTGAGTTGTGTTCGGTCTCTCCAAATTTGAAACTAATTTGGGTGAAAATGGATCTTATTCATGTTTGGGATAGGCGTTGGAAAGAGCATAGATAGGTGCAAATTGGCCATTGGGCGTCTTGAACAGTTTCATGAGCTACAAAAAGTTATTCAATGAGGTCGCTACAATGTAGTTGCCAACTGTTTAGTGTATTTTCGAAACTCTACATGTTCTCCAATAACCACTAAATGTATTCAAAGTGTTTTTGCAGTTTCTCTCTTGCACCTCCAACGGTGCAAAATTGTCATCCGCATTGTGGCAGTCTCCTTGGAAAATTTCTCAGTTCTAGATAGCCATTGGACAAATTCTGAATCAAAGATAGTTGACTTTTGAGGCTATTTCTCTTCCTCAACTACTCGAGGAAGAGAAGCTCTTTCTTAGAGTTAATTTGGTTTGACCTCAGTTTCAAATATCCTACACCTAAAAAGAATGCATTTGTTTCTTTCAGGGTAAATCTTCTAAGGGTTCTTTTTTAAACGACAGGTCTTTCTAAAAAGTAAAAAGTGACCTTTCTTTGCCTCTCTTGACATATTTGCAATTCGCATGACTTGTTTTCTTTGTCCTAGAACAATTTTGTGCACTTATACTTTGTAGAGCTCCTTAGTTAAGCAATGGGAAAGCAAGGTTTATGTGAAACATGTAAATCATTTTAGAACGTAGTGAACACGTATATCAAACCAATCAGAAAAGCAATGAGCTTACAAACAGGAACCAAACAAGAAAAGGAGAAATGTTCTCCAAAAGAAGAAAAATTAACAATTTTGAAACACAGGCAAGTGCAATATTGTTATTGTTGGTAGAATTTACTCGTCTTTGTCTTAGTACTGTCTTCTATAACATTCTGGTGGCATTTGCCCATTGAACCGTTTAGTGTCTTTGCAGTAATCATATATCTTGTATTTGCTCTGGATTTCATTGAGCTTGGCCAACTGAGCAGCACTCAGCTGTGCATAAACTGGGGAAGTCCACCAATTTGCTAGGGACTTGGTGGCACATTGGATAATGCTGAGCACTCCATTCCAGTAACAACCTCTCGGCCTAAATTGGCGCAAGCTAGCAGTGAATGGTGCGTTGGTCCAGTTTGTTTTCACACGACCTCCTTGAGTTGCCCAATCATCTGCATTCCACAAACTGGTATATACTCTCATACCTTGCTTGTTAGGGAAAGCTATCCCTTGGTTCTCGTAGTTCCGGAAAACTCTGATTGGGGTACCATCAATATACCACCTGAAATTAGCCATATCTCACATTTCTTATTTTCTTTTCACAAGAAAAAGTTTTAGGCCCCTTTTGATAACCATGTGAAGCTTTATCTTTGAAATTTAAACTTATAAACACTACTTATACCTAGAAATTTCTATGTTTTGTTATCTGCTTTCTACCAATGTTTCAGAAAATAAACTTTTGTCCGATGATATTAAGTTCACTTACACAACAGCATTAGGACTCCAGTGAATTGTGTAGTTGTGGAAATTAGCAGTAGGGTCGAACCACACTCGAAACTGCTGTTCTCTGTTTCCAACACCCTGAGTGAATATGTTTGTATGAATGGTGTAAGGCTGTCCTGTAACATTCCCCAAGAACTCATAGTCTATCTCATCATGAGCTGTACCAGTAGAAGATAGCTGCAAAATTTTCAATATCAAGAATTAGCACCAGAAATGAAATGATGTGACAGATCAATGGGTCATTTGTGAGTTTCTGCAGCACTGAACCGTACATAATATGCTGTTACTACGCCTGCAGAATTTCCCGGAACCAACTTGATGAGAGCTTCAAAGCTTCCAAATAAGAAACTTCTCTTTGACTTTGCTCCCGAGCCTGCAATAACAAAATCATTCTTGCTCGTCAAAGCTAACTACTGGATGAATTTGTTTATCTTTTTCACACAGGTATGAGAGACATGAAGATATGATCAACAAAAATGATATTATTTGTCACCTGTACTACTGTCCAAAACAAGCTGAAGGCTATCCCCTAGTATTTTGGACTGACTATTTCCCCAGCTTATGACCATGTTCTTTGAAATATTTGCATCAACTACAATGTGGTTAGACACAATCAAACAGACCAAAAATGCTATAGAGAAAGATTGAAACTTTGCCATTTCAATCCCAATATCATGAAACCTCTTTCTTTGTCTTTCTTTTCTGGGATTGAATTGGGACGTTTCAAAAATTCAAGTTATTGATTGCTTT

mRNA sequence

AGAGAGACTGGGGAAGAAGATGATAGGAGATGTAGAGAAAATGGTCGCGATCGGTCTCGTCTGGGGCGCCACCAACGCTCTGATGCGCCGTGGCGCCCTTCTCTGGGATCAAGCTCTCAGTTCTTCCTCCAATTCAACCAAATTCCTCTCCTCCCTCCGTCGATGGCTCAAGCTCCTCTCTATCTGGCAATACACTCTCCCCTTTTTGCTTAATCTCACCGCCTCCGCTACCTTCTTTGCCATTCTAAGCAATGCCCCAATATCGCTCGCCGTTCCGGTCACCAACGCCACTACTTTTGCTGCCACCGCCGTGTTCGGAATGCTCCTAGGCGAGGACACTCGTGTCGGGTACGCTCTGTTTGGTACTGCTCTCATTGGTTTGGGCAGCTCCTTAGTTAAGCAATGGGAAAGCAAGGTTTATGTGAAACATGGACTTGGTGGCACATTGGATAATGCTGAGCACTCCATTCCAGTAACAACCTCTCGGCCTAAATTGGCGCAAGCTAGCAGTGAATGGTGCGTTGGTCCAGTTTGTTTTCACACGACCTCCTTGAGTTGCCCAATCATCTGCATTCCACAAACTGAATTTCCCGGAACCAACTTGATGAGAGCTTCAAAGCTTCCAAATAAGAAACTTCTCTTTGACTTTGCTCCCGAGCCTGCAATAACAAAATCATTCTTGCTCGTCAAAGCTAACTACTGGATGAATTTGTATGAGAGACATGAAGATATGATCAACAAAAATGATATTATTTGTCACCTGTACTACTGTCCAAAACAAGCTGAAGGCTATCCCCTAGTATTTTGGACTGACTATTTCCCCAGCTTATGACCATGTTCTTTGAAATATTTGCATCAACTACAATGTGGTTAGACACAATCAAACAGACCAAAAATGCTATAGAGAAAGATTGAAACTTTGCCATTTCAATCCCAATATCATGAAACCTCTTTCTTTGTCTTTCTTTTCTGGGATTGAATTGGGACGTTTCAAAAATTCAAGTTATTGATTGCTTT

Coding sequence (CDS)

ATGATAGGAGATGTAGAGAAAATGGTCGCGATCGGTCTCGTCTGGGGCGCCACCAACGCTCTGATGCGCCGTGGCGCCCTTCTCTGGGATCAAGCTCTCAGTTCTTCCTCCAATTCAACCAAATTCCTCTCCTCCCTCCGTCGATGGCTCAAGCTCCTCTCTATCTGGCAATACACTCTCCCCTTTTTGCTTAATCTCACCGCCTCCGCTACCTTCTTTGCCATTCTAAGCAATGCCCCAATATCGCTCGCCGTTCCGGTCACCAACGCCACTACTTTTGCTGCCACCGCCGTGTTCGGAATGCTCCTAGGCGAGGACACTCGTGTCGGGTACGCTCTGTTTGGTACTGCTCTCATTGGTTTGGGCAGCTCCTTAGTTAAGCAATGGGAAAGCAAGGTTTATGTGAAACATGGACTTGGTGGCACATTGGATAATGCTGAGCACTCCATTCCAGTAACAACCTCTCGGCCTAAATTGGCGCAAGCTAGCAGTGAATGGTGCGTTGGTCCAGTTTGTTTTCACACGACCTCCTTGAGTTGCCCAATCATCTGCATTCCACAAACTGAATTTCCCGGAACCAACTTGATGAGAGCTTCAAAGCTTCCAAATAAGAAACTTCTCTTTGACTTTGCTCCCGAGCCTGCAATAACAAAATCATTCTTGCTCGTCAAAGCTAACTACTGGATGAATTTGTATGAGAGACATGAAGATATGATCAACAAAAATGATATTATTTGTCACCTGTACTACTGTCCAAAACAAGCTGAAGGCTATCCCCTAGTATTTTGGACTGACTATTTCCCCAGCTTATGA

Protein sequence

MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLKLLSIWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFGMLLGEDTRVGYALFGTALIGLGSSLVKQWESKVYVKHGLGGTLDNAEHSIPVTTSRPKLAQASSEWCVGPVCFHTTSLSCPIICIPQTEFPGTNLMRASKLPNKKLLFDFAPEPAITKSFLLVKANYWMNLYERHEDMINKNDIICHLYYCPKQAEGYPLVFWTDYFPSL
Homology
[Close]
BLAST of Clc06G09690 vs. NCBI nr
Match: KAG6589933.1 (Transmembrane protein 234-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 294.3 bits (752), Expect = 1.1e-75
Identity = 175/298 (58.72%), Postives = 195/298 (65.44%), Query Frame = 0 

Query: 1   MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNST----KFLSSLRRWLKLLSIW 60
           MIGDVEKMVAIG+VWGATNALMRRGALLWDQAL SSSN+T    K LSSLRRWLK+LSIW
Sbjct: 1   MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKVLSIW 60

Query: 61  QYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFGMLLGEDTRVGYALFG- 120
           QYT+PFL+NLTASATFFAILS+APISLAVPVTNATTFAATAVFGMLLGE+TRVGYALFG 
Sbjct: 61  QYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGF 120

Query: 121 ---------------------TALIGLGSSLVKQWESKV-----------------YVK- 180
                                  ++   SS+   W   +                 ++K 
Sbjct: 121 YRCDCNFPHSEMHDMNVQRLLRNIVLELSSITFWWHLPIEPFSVFAVIIYHVVLLDFIKL 180

Query: 181 ------------------HGLGGTLDNAEHSIPVTTSRPKLAQASSEWCVGPVCFHTTSL 224
                              GL GTL NA +SIPVT+S PK+A+A  EWCVGP+ FH  SL
Sbjct: 181 SQLRSTELCISWGSPPVCWGLSGTLTNAGYSIPVTSSWPKVAKACREWCVGPIGFHAASL 240

[Close]
BLAST of Clc06G09690 vs. NCBI nr
Match: XP_038879672.1 (transmembrane protein 234 homolog [Benincasa hispida])

HSP 1 Score: 223.0 bits (567), Expect = 3.1e-54
Identity = 118/122 (96.72%), Postives = 120/122 (98.36%), Query Frame = 0 

Query: 1   MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLKLLSIWQYTL 60
           MIGDVEKMVAIGLVWGATNALMRRGALLWDQAL SSSNSTK LSSLRRWLKLLSIWQYTL
Sbjct: 1   MIGDVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTKLLSSLRRWLKLLSIWQYTL 60

Query: 61  PFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFGMLLGEDTRVGYALFGTALIG 120
           PFLLNLTASATFFAILS+APISLAVP+TNATTFAATAVFGMLLGEDTRVGYALFGTALIG
Sbjct: 61  PFLLNLTASATFFAILSDAPISLAVPITNATTFAATAVFGMLLGEDTRVGYALFGTALIG 120

Query: 121 LG 123
           LG
Sbjct: 121 LG 122

[Close]
BLAST of Clc06G09690 vs. NCBI nr
Match: KAA0062621.1 (transmembrane protein 234-like protein [Cucumis melo var. makuwa] >TYJ98060.1 transmembrane protein 234-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 213.8 bits (543), Expect = 1.9e-51
Identity = 114/122 (93.44%), Postives = 117/122 (95.90%), Query Frame = 0 

Query: 1   MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLKLLSIWQYTL 60
           MIGDVEKMVAIGLVWGATNALMRRGALLWDQAL SSS+STK  SSLRRWLKL SIWQYTL
Sbjct: 1   MIGDVEKMVAIGLVWGATNALMRRGALLWDQALQSSSDSTKPFSSLRRWLKLFSIWQYTL 60

Query: 61  PFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFGMLLGEDTRVGYALFGTALIG 120
           PFLLNLTASATFFAILS+APISLAVPVTNATTFAATAVFG+LLGEDTRVGYALFGTALIG
Sbjct: 61  PFLLNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGVLLGEDTRVGYALFGTALIG 120

Query: 121 LG 123
            G
Sbjct: 121 FG 122

[Close]
BLAST of Clc06G09690 vs. NCBI nr
Match: XP_016902925.1 (PREDICTED: transmembrane protein 234 homolog [Cucumis melo])

HSP 1 Score: 213.8 bits (543), Expect = 1.9e-51
Identity = 114/122 (93.44%), Postives = 117/122 (95.90%), Query Frame = 0 

Query: 1   MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLKLLSIWQYTL 60
           MIGDVEKMVAIGLVWGATNALMRRGALLWDQAL SSS+STK  SSLRRWLKL SIWQYTL
Sbjct: 11  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALQSSSDSTKPFSSLRRWLKLFSIWQYTL 70

Query: 61  PFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFGMLLGEDTRVGYALFGTALIG 120
           PFLLNLTASATFFAILS+APISLAVPVTNATTFAATAVFG+LLGEDTRVGYALFGTALIG
Sbjct: 71  PFLLNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGVLLGEDTRVGYALFGTALIG 130

Query: 121 LG 123
            G
Sbjct: 131 FG 132

[Close]
BLAST of Clc06G09690 vs. NCBI nr
Match: XP_023516356.1 (transmembrane protein 234 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213.0 bits (541), Expect = 3.2e-51
Identity = 115/126 (91.27%), Postives = 120/126 (95.24%), Query Frame = 0 

Query: 1   MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNST----KFLSSLRRWLKLLSIW 60
           MIGDVEKMVAIG+VWGATNALMRRGALLWDQAL SSSN+T    K LSSLRRWLKLLSIW
Sbjct: 1   MIGDVEKMVAIGMVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIW 60

Query: 61  QYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFGMLLGEDTRVGYALFGT 120
           QYTLPFL+NLTASATFFAILS+APISLAVPVTNATTFAATAVFGMLLGE+TRVGYALFGT
Sbjct: 61  QYTLPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT 120

Query: 121 ALIGLG 123
           ALIGLG
Sbjct: 121 ALIGLG 126

[Close]
BLAST of Clc06G09690 vs. ExPASy Swiss-Prot
Match: Q54ZG7 (Transmembrane protein 234 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0277575 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.1e-09
Identity = 36/102 (35.29%), Postives = 59/102 (57.84%), Query Frame = 0 

Query: 4   DVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLKLLSIWQYTLPFL 63
           ++  ++ +G +WG TN L++RG+    + +S           +  ++ L +   YT+P L
Sbjct: 5   NIISLLLVGFIWGGTNPLIKRGS----EGVSKVKKDNFLSQIIYEFVYLWTRPSYTIPML 64

Query: 64  LNLTASATFFAILSNAPISLAVPVTNATTFAATAVFGMLLGE 106
           +NL+ S  FF  LS   ISL VP++N+ TF  T++ GMLLGE
Sbjct: 65  INLSGSVVFFYTLSKVDISLVVPISNSLTFLFTSLMGMLLGE 102

[Close]
BLAST of Clc06G09690 vs. ExPASy Swiss-Prot
Match: A0NGI1 (Transmembrane protein 234 homolog OS=Anopheles gambiae OX=7165 GN=AGAP012180 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 8.5e-07
Identity = 40/123 (32.52%), Postives = 69/123 (56.10%), Query Frame = 0 

Query: 5   VEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLK---LLSIWQYTLP 64
           V  ++ + ++WGATN  ++RG++ +++  + S      L  L  WL+   L++ WQY LP
Sbjct: 17  VLSILLVAIMWGATNPFIKRGSIGYNELKADSK-----LGQL--WLEVRFLITRWQYLLP 76

Query: 65  FLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFGMLLGEDTRVGYALF-GTALIG 124
            ++N   S  +   L    +SL VP+ N+ TF  TA+   LLGE  + G+ ++ G  L+ 
Sbjct: 77  LVINQLGSIVYVLTLQRTELSLTVPMANSLTFVFTAITARLLGE-RQSGWKIYCGMTLVI 131

[Close]
BLAST of Clc06G09690 vs. ExPASy Swiss-Prot
Match: Q8R1E7 (Transmembrane protein 234 OS=Mus musculus OX=10090 GN=Tmem234 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.0e-04
Identity = 34/116 (29.31%), Postives = 55/116 (47.41%), Query Frame = 0 

Query: 3   GDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLKLLSIWQYTLPF 62
           G V  +V +  +WG T  L++R +      L      T     L+    L    +Y +PF
Sbjct: 6   GQVLALVLVAALWGGTQPLLKRAS----SGLEQVRERTWAWQLLQEIKALFGNTEYLMPF 65

Query: 63  LLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFGMLLGEDTRVGYALFGTAL 119
           LLN + S  ++  L++  ++LAVP+ N+     T + G +LGED     A+ G  L
Sbjct: 66  LLNQSGSLLYYLTLASTDLTLAVPICNSLAIVFTLIVGKVLGEDIGGKEAVAGMVL 117

[Close]
BLAST of Clc06G09690 vs. ExPASy TrEMBL
Match: A0A5A7VAD4 (Transmembrane protein 234-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold369G00120 PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 9.0e-52
Identity = 114/122 (93.44%), Postives = 117/122 (95.90%), Query Frame = 0 

Query: 1   MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLKLLSIWQYTL 60
           MIGDVEKMVAIGLVWGATNALMRRGALLWDQAL SSS+STK  SSLRRWLKL SIWQYTL
Sbjct: 1   MIGDVEKMVAIGLVWGATNALMRRGALLWDQALQSSSDSTKPFSSLRRWLKLFSIWQYTL 60

Query: 61  PFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFGMLLGEDTRVGYALFGTALIG 120
           PFLLNLTASATFFAILS+APISLAVPVTNATTFAATAVFG+LLGEDTRVGYALFGTALIG
Sbjct: 61  PFLLNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGVLLGEDTRVGYALFGTALIG 120

Query: 121 LG 123
            G
Sbjct: 121 FG 122

[Close]
BLAST of Clc06G09690 vs. ExPASy TrEMBL
Match: A0A1S4E4M5 (transmembrane protein 234 homolog OS=Cucumis melo OX=3656 GN=LOC103501037 PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 9.0e-52
Identity = 114/122 (93.44%), Postives = 117/122 (95.90%), Query Frame = 0 

Query: 1   MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLKLLSIWQYTL 60
           MIGDVEKMVAIGLVWGATNALMRRGALLWDQAL SSS+STK  SSLRRWLKL SIWQYTL
Sbjct: 11  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALQSSSDSTKPFSSLRRWLKLFSIWQYTL 70

Query: 61  PFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFGMLLGEDTRVGYALFGTALIG 120
           PFLLNLTASATFFAILS+APISLAVPVTNATTFAATAVFG+LLGEDTRVGYALFGTALIG
Sbjct: 71  PFLLNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGVLLGEDTRVGYALFGTALIG 130

Query: 121 LG 123
            G
Sbjct: 131 FG 132

[Close]
BLAST of Clc06G09690 vs. ExPASy TrEMBL
Match: A0A6J1HBE7 (transmembrane protein 234 homolog OS=Cucurbita moschata OX=3662 GN=LOC111461839 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 3.4e-51
Identity = 114/126 (90.48%), Postives = 120/126 (95.24%), Query Frame = 0 

Query: 1   MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNST----KFLSSLRRWLKLLSIW 60
           MIGDVEKMVAIG+VWGATNALMRRGALLWDQAL SSSN+T    K LSSLRRWLKLLSIW
Sbjct: 1   MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIW 60

Query: 61  QYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFGMLLGEDTRVGYALFGT 120
           QYT+PFL+NLTASATFFAILS+APISLAVPVTNATTFAATAVFGMLLGE+TRVGYALFGT
Sbjct: 61  QYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT 120

Query: 121 ALIGLG 123
           ALIGLG
Sbjct: 121 ALIGLG 126

[Close]
BLAST of Clc06G09690 vs. ExPASy TrEMBL
Match: A0A6J1JK46 (transmembrane protein 234 homolog OS=Cucurbita maxima OX=3661 GN=LOC111485302 PE=3 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 2.9e-50
Identity = 112/126 (88.89%), Postives = 118/126 (93.65%), Query Frame = 0 

Query: 1   MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNST----KFLSSLRRWLKLLSIW 60
           MIGDVEKMVAIG+ WGATNALMRRGALLWDQAL SSSN+T    K LSS RRWLKLLSIW
Sbjct: 1   MIGDVEKMVAIGIAWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSFRRWLKLLSIW 60

Query: 61  QYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFGMLLGEDTRVGYALFGT 120
           QYT+PFL+NLTASATFFAILS+APISLAVPVTNATTFAATAVFGMLLGE+TRVGYALFGT
Sbjct: 61  QYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT 120

Query: 121 ALIGLG 123
           ALIGLG
Sbjct: 121 ALIGLG 126

[Close]
BLAST of Clc06G09690 vs. ExPASy TrEMBL
Match: A0A0A0LT65 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G202290 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 1.9e-49
Identity = 110/122 (90.16%), Postives = 112/122 (91.80%), Query Frame = 0 

Query: 1   MIGDVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNSTKFLSSLRRWLKLLSIWQYTL 60
           MIGDVEKMVAIGLVWGATN LMRRGALLWDQAL SSS+STK  SSLRRWLKL SIWQYTL
Sbjct: 2   MIGDVEKMVAIGLVWGATNVLMRRGALLWDQALKSSSDSTKPFSSLRRWLKLFSIWQYTL 61

Query: 61  PFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFGMLLGEDTRVGYALFGTALIG 120
           PF LNLTASATFF ILS+APISLAVPVTNATTFAATAVFGMLLGE TRVGYALFGT LIG
Sbjct: 62  PFFLNLTASATFFTILSHAPISLAVPVTNATTFAATAVFGMLLGEATRVGYALFGTTLIG 121

Query: 121 LG 123
            G
Sbjct: 122 FG 123

[Close]
BLAST of Clc06G09690 vs. TAIR 10
Match: AT5G19570.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0546 (InterPro:IPR018908); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 154.8 bits (390), Expect = 9.6e-38
Identity = 81/128 (63.28%), Postives = 102/128 (79.69%), Query Frame = 0 

Query: 4   DVEKMVAIGLVWGATNALMRRGALLWDQALSSSSNST---------KFLSSLRRWLKLLS 63
           D++KMVA+GLVWGATNAL+RRGAL WD+  SSS+  +         K + +LR W+ LL 
Sbjct: 4   DMDKMVAVGLVWGATNALIRRGALAWDKTKSSSTTESHSPPLQIRRKIMIALRDWINLLL 63

Query: 64  IWQYTLPFLLNLTASATFFAILSNAPISLAVPVTNATTFAATAVFGMLLGEDTRVGYALF 123
            WQY++PFL+NL+ASATFFA+LS+APISLAVPVTNATTFAATA FG+LLGE+T++G AL 
Sbjct: 64  FWQYSIPFLINLSASATFFALLSHAPISLAVPVTNATTFAATAAFGILLGEETQIGLALL 123

The following BLAST results are available for this feature:
BLAST of Clc06G09690 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6589933.11.1e-7558.72Transmembrane protein 234-like protein, partial [Cucurbita argyrosperma subsp. s... [more]
XP_038879672.13.1e-5496.72transmembrane protein 234 homolog [Benincasa hispida][more]
KAA0062621.11.9e-5193.44transmembrane protein 234-like protein [Cucumis melo var. makuwa] >TYJ98060.1 tr... [more]
XP_016902925.11.9e-5193.44PREDICTED: transmembrane protein 234 homolog [Cucumis melo][more]
XP_023516356.13.2e-5191.27transmembrane protein 234 homolog isoform X1 [Cucurbita pepo subsp. pepo][more]
BLAST of Clc06G09690 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q54ZG73.1e-0935.29Transmembrane protein 234 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0... [more]
A0NGI18.5e-0732.52Transmembrane protein 234 homolog OS=Anopheles gambiae OX=7165 GN=AGAP012180 PE=... [more]
Q8R1E71.0e-0429.31Transmembrane protein 234 OS=Mus musculus OX=10090 GN=Tmem234 PE=1 SV=1[more]
BLAST of Clc06G09690 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VAD49.0e-5293.44Transmembrane protein 234-like protein OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A1S4E4M59.0e-5293.44transmembrane protein 234 homolog OS=Cucumis melo OX=3656 GN=LOC103501037 PE=3 S... [more]
A0A6J1HBE73.4e-5190.48transmembrane protein 234 homolog OS=Cucurbita moschata OX=3662 GN=LOC111461839 ... [more]
A0A6J1JK462.9e-5088.89transmembrane protein 234 homolog OS=Cucurbita maxima OX=3661 GN=LOC111485302 PE... [more]
A0A0A0LT651.9e-4990.16Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G202290 PE=3 SV=1[more]
BLAST of Clc06G09690 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G19570.19.6e-3863.28unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018908Putative transmembrane family 234PFAMPF10639TMEM234coord: 8..126
e-value: 1.2E-24
score: 86.6
IPR018908Putative transmembrane family 234PANTHERPTHR28668TRANSMEMBRANE PROTEIN 234coord: 1..126
NoneNo IPR availableGENE3D1.10.3730.20coord: 25..132
e-value: 2.3E-5
score: 26.5
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 42..129

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc06G09690.2Clc06G09690.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane