Clc06G09300 (gene) Watermelon (cordophanus) v2

Overview
NameClc06G09300
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
LocationClcChr06: 11963635 .. 11964706 (-)
RNA-Seq ExpressionClc06G09300
SyntenyClc06G09300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAGAGAGATGATTATTACCAACTCCAAACCAAACCTCCTCATATTTATTAAAACATATTGTCTTCTTCCTTTTATTTCTCCCCTTTCTCTCCCCAAATAAAACAAAATCACAACTCAATGTTGCTAAGAGCCACCATTTCAACAACCAAAAAATTCTTCAGAAAAACCTTATGCAACTTCAAATCCTTCTTCTCCAATAGCTACCATAGGCTTCCCAAGGCGGCCTTCCCCGCCGTCTCGGAAATGGATAAAGACTCAACCTTTCATTTCATTTCATCCCAAAAGGAGGTGCAAAATGGAAGCTTTATGAAGAATAACAATCCCAATGATGCACTTCATTTTTCGAAGACTACTACTACTACGATCGACGAAGCCCAGATGGAAAGAGTTGATAAAAATGAAGGTAGCATCAAAATTGGAGCTATCCATCAAAGGAAAACCCAAGAAAATTTGGAATATTGTAGTTGGGAGAGAAGAATGTGTTTGGTTGCGAAGAAAATGAAAGAGTTGGAAAAGGTAGATGCTAGAAATGTGGATCATGCAATGGATATTGAAGAAGTTCTTCATTACTACTCTCGTCTCACTTCTCCAACATTTCTTGAGATTGTGGATAAATTCTTCATGGACATTTTTGCTGAATTTTCTGCTAATTCCTCTTCTCAACAAACTCTATTTCCTCGGAATCAGTGGGGGAATTGAATTCAACTTCATACATATCGATGTCGATACTAGAAGTTTCGAGCTTGCTTGATTTCTTTTGCAACCTATGAGTTGTAATGCAAATTTGATTGTGTGTGTTATTATGATTCATACATTTTAGTTTCATTTGAATGCCTATGAATGAATAATACATTATTAAATCATTTTTAATGTGATTTTTGTTTTAAATGATTGTGTCGCCGCTCGAGTCTTGCACGTGTTCTTCATCGTTATTGTGGCCTTTTCGTGGACTTGATTTCCGACTTGCTTCTCTTGGTCTAATCTCACTTCTCGGGCTCACTTGTGGCCGGGTTGTCCACCTAAACCCGAGGCTGTTATAGAAGAGATTCTCGCATCGTTGTGATGTTTAG

mRNA sequence

CAAAGAGAGATGATTATTACCAACTCCAAACCAAACCTCCTCATATTTATTAAAACATATTGTCTTCTTCCTTTTATTTCTCCCCTTTCTCTCCCCAAATAAAACAAAATCACAACTCAATGTTGCTAAGAGCCACCATTTCAACAACCAAAAAATTCTTCAGAAAAACCTTATGCAACTTCAAATCCTTCTTCTCCAATAGCTACCATAGGCTTCCCAAGGCGGCCTTCCCCGCCGTCTCGGAAATGGATAAAGACTCAACCTTTCATTTCATTTCATCCCAAAAGGAGGTGCAAAATGGAAGCTTTATGAAGAATAACAATCCCAATGATGCACTTCATTTTTCGAAGACTACTACTACTACGATCGACGAAGCCCAGATGGAAAGAGTTGATAAAAATGAAGGTAGCATCAAAATTGGAGCTATCCATCAAAGGAAAACCCAAGAAAATTTGGAATATTGTAGTTGGGAGAGAAGAATGTGTTTGGTTGCGAAGAAAATGAAAGAGTTGGAAAAGGTAGATGCTAGAAATGTGGATCATGCAATGGATATTGAAGAAGTTCTTCATTACTACTCTCGTCTCACTTCTCCAACATTTCTTGAGATTGTGGATAAATTCTTCATGGACATTTTTGCTGAATTTTCTGCTAATTCCTCTTCTCAACAAACTCTATTTCCTCGGAATCAGTGGGGGAATTGAATTCAACTTCATACATATCGATGTCGATACTAGAAGTTTCGAGCTTGCTTGATTTCTTTTGCAACCTATGAGTTGTAATGCAAATTTGATTGTGTGTGTTATTATGATTCATACATTTTAGTTTCATTTGAATGCCTATGAATGAATAATACATTATTAAATCATTTTTAATGTGATTTTTGTTTTAAATGATTGTGTCGCCGCTCGAGTCTTGCACGTGTTCTTCATCGTTATTGTGGCCTTTTCGTGGACTTGATTTCCGACTTGCTTCTCTTGGTCTAATCTCACTTCTCGGGCTCACTTGTGGCCGGGTTGTCCACCTAAACCCGAGGCTGTTATAGAAGAGATTCTCGCATCGTTGTGATGTTTAG

Coding sequence (CDS)

ATGTTGCTAAGAGCCACCATTTCAACAACCAAAAAATTCTTCAGAAAAACCTTATGCAACTTCAAATCCTTCTTCTCCAATAGCTACCATAGGCTTCCCAAGGCGGCCTTCCCCGCCGTCTCGGAAATGGATAAAGACTCAACCTTTCATTTCATTTCATCCCAAAAGGAGGTGCAAAATGGAAGCTTTATGAAGAATAACAATCCCAATGATGCACTTCATTTTTCGAAGACTACTACTACTACGATCGACGAAGCCCAGATGGAAAGAGTTGATAAAAATGAAGGTAGCATCAAAATTGGAGCTATCCATCAAAGGAAAACCCAAGAAAATTTGGAATATTGTAGTTGGGAGAGAAGAATGTGTTTGGTTGCGAAGAAAATGAAAGAGTTGGAAAAGGTAGATGCTAGAAATGTGGATCATGCAATGGATATTGAAGAAGTTCTTCATTACTACTCTCGTCTCACTTCTCCAACATTTCTTGAGATTGTGGATAAATTCTTCATGGACATTTTTGCTGAATTTTCTGCTAATTCCTCTTCTCAACAAACTCTATTTCCTCGGAATCAGTGGGGGAATTGA

Protein sequence

MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKAAFPAVSEMDKDSTFHFISSQKEVQNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGSIKIGAIHQRKTQENLEYCSWERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSANSSSQQTLFPRNQWGN
Homology
BLAST of Clc06G09300 vs. NCBI nr
Match: XP_038880084.1 (uncharacterized protein LOC120071772 [Benincasa hispida])

HSP 1 Score: 292.4 bits (747), Expect = 3.0e-75
Identity = 154/191 (80.63%), Postives = 169/191 (88.48%), Query Frame = 0

Query: 1   MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKAA--FPAVSEMDKDSTFHFISSQKEV 60
           M LRA+IS TKKFF+KTLCNFKSFFSNSYHRLP+AA  F AVSEMDKDSTFHFI SQ+EV
Sbjct: 1   MFLRASISNTKKFFKKTLCNFKSFFSNSYHRLPEAAPPFLAVSEMDKDSTFHFIPSQQEV 60

Query: 61  QNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGSIKIGAIHQRKTQENLEYCSWE 120
           QNGSFMKNNNPN ALHFSK    T+D+ + ERV+KNE  IKI A HQRKTQENLE CSW+
Sbjct: 61  QNGSFMKNNNPNAALHFSK---NTMDQTRKERVEKNEDGIKIEATHQRKTQENLECCSWK 120

Query: 121 RRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEF-SA 180
           RRMCLVAKK+KELEKVDARNVDHAMDI+EVLHYYSRLTSPTFLEIVDKFF+DIFAEF SA
Sbjct: 121 RRMCLVAKKLKELEKVDARNVDHAMDIQEVLHYYSRLTSPTFLEIVDKFFVDIFAEFNSA 180

Query: 181 NSSSQQTLFPR 189
           +SSS+ + F R
Sbjct: 181 HSSSKPSHFTR 188

BLAST of Clc06G09300 vs. NCBI nr
Match: XP_008463389.1 (PREDICTED: uncharacterized protein LOC103501556 [Cucumis melo])

HSP 1 Score: 281.2 bits (718), Expect = 6.8e-72
Identity = 148/193 (76.68%), Postives = 163/193 (84.46%), Query Frame = 0

Query: 1   MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKA--AFPA-VSEMDKDSTFHFISSQKE 60
           MLLRATIS TKKFFRKT+ NFKSFFSN+YHRLPKA   FPA VSEMDKDSTFHFIS  +E
Sbjct: 39  MLLRATISNTKKFFRKTIWNFKSFFSNTYHRLPKAPPPFPAVVSEMDKDSTFHFISPHEE 98

Query: 61  VQNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGSIKIGAIHQRKTQENLEYCSW 120
           VQNGSFMKNN PN A+H S   T+T+ E+QMERV+KNE  +KIG  HQRK QENLEYC W
Sbjct: 99  VQNGSFMKNNTPNAAVHLS---TSTMGESQMERVEKNEDRMKIGGTHQRKMQENLEYCRW 158

Query: 121 ERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSA 180
           +RRMCLVAK MKELEK+DARNVDH +DIEE+LHYYSRLTSPTFLE+VDKF +DIFAEFSA
Sbjct: 159 KRRMCLVAKNMKELEKLDARNVDHTLDIEEILHYYSRLTSPTFLEMVDKFVVDIFAEFSA 218

Query: 181 NSSSQQTLFPRNQ 191
            SSSQ T   R Q
Sbjct: 219 ISSSQPTQLTRIQ 228

BLAST of Clc06G09300 vs. NCBI nr
Match: XP_011655505.1 (uncharacterized protein LOC105435550 [Cucumis sativus])

HSP 1 Score: 278.5 bits (711), Expect = 4.4e-71
Identity = 144/186 (77.42%), Postives = 160/186 (86.02%), Query Frame = 0

Query: 1   MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKA--AFPAVSEMDKDSTFHFISSQKEV 60
           MLLRATIS TKKFFRKTL NFKSFFSN+YHRLPK    FPAVSEMDK+STFHFISSQ+EV
Sbjct: 1   MLLRATISNTKKFFRKTLWNFKSFFSNTYHRLPKVPPPFPAVSEMDKESTFHFISSQEEV 60

Query: 61  QNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGSIKIGAIHQRKTQENLEYCSWE 120
           QNGS MKNNNPN  +  S   T T+ ++Q ERV+K+E  +K GA HQRK +ENLEYCSW+
Sbjct: 61  QNGSIMKNNNPNAEVRLS---TCTMGDSQKERVEKSEDRMKTGATHQRKMEENLEYCSWK 120

Query: 121 RRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSAN 180
           RRMCLVAK MKELEK+DARNVDHA+DIEE+LHYYSRLTSPTFLEIVDKFF+DIF EFSA 
Sbjct: 121 RRMCLVAKNMKELEKLDARNVDHALDIEEILHYYSRLTSPTFLEIVDKFFVDIFTEFSAI 180

Query: 181 SSSQQT 185
           SSSQ T
Sbjct: 181 SSSQPT 183

BLAST of Clc06G09300 vs. NCBI nr
Match: XP_022145016.1 (uncharacterized protein LOC111014544 [Momordica charantia])

HSP 1 Score: 230.3 bits (586), Expect = 1.4e-56
Identity = 134/201 (66.67%), Postives = 154/201 (76.62%), Query Frame = 0

Query: 1   MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKA--AFPAVSEMDKDSTFHFISSQKEV 60
           MLLRA+IS TKKFF+KT+CNFKSFFS SYHRLPK    F A   M+KDSTF FISSQKEV
Sbjct: 1   MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGPRMEKDSTFQFISSQKEV 60

Query: 61  QNGSFMKNNNPNDALHFSKTTTTTIDEAQME--RVDKNEGSI-KIGAIHQRKTQENLE-- 120
           Q+G FMKNN  ++ALHF       ++E QME   VDK+ GS+  IGA HQRK QEN +  
Sbjct: 61  QSGGFMKNN--SNALHF----PNKMEETQMEIRVVDKSYGSMNNIGATHQRKRQENRDRE 120

Query: 121 ----YCSWERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFM 180
               Y   ERRMCLVAKK+KELEK+D+RNVDHA+DIEE+LHYYSRLT P +LEIVDKFF 
Sbjct: 121 SSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFT 180

Query: 181 DIFAEFSANSSSQ--QTLFPR 189
           +IFAEFSANSSSQ   T+ PR
Sbjct: 181 EIFAEFSANSSSQPCHTIKPR 195

BLAST of Clc06G09300 vs. NCBI nr
Match: KAE8652951.1 (hypothetical protein Csa_017733 [Cucumis sativus])

HSP 1 Score: 227.6 bits (579), Expect = 8.9e-56
Identity = 117/162 (72.22%), Postives = 133/162 (82.10%), Query Frame = 0

Query: 25  FSNSYHRLPKA--AFPAVSEMDKDSTFHFISSQKEVQNGSFMKNNNPNDALHFSKTTTTT 84
           F   +  LPK    FPAVSEMDK+STFHFISSQ+EVQNGS MKNNNPN  +  S   T T
Sbjct: 3   FQGFHGELPKVPPPFPAVSEMDKESTFHFISSQEEVQNGSIMKNNNPNAEVRLS---TCT 62

Query: 85  IDEAQMERVDKNEGSIKIGAIHQRKTQENLEYCSWERRMCLVAKKMKELEKVDARNVDHA 144
           + ++Q ERV+K+E  +K GA HQRK +ENLEYCSW+RRMCLVAK MKELEK+DARNVDHA
Sbjct: 63  MGDSQKERVEKSEDRMKTGATHQRKMEENLEYCSWKRRMCLVAKNMKELEKLDARNVDHA 122

Query: 145 MDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSANSSSQQT 185
           +DIEE+LHYYSRLTSPTFLEIVDKFF+DIF EFSA SSSQ T
Sbjct: 123 LDIEEILHYYSRLTSPTFLEIVDKFFVDIFTEFSAISSSQPT 161

BLAST of Clc06G09300 vs. ExPASy TrEMBL
Match: A0A1S3CJL1 (uncharacterized protein LOC103501556 OS=Cucumis melo OX=3656 GN=LOC103501556 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 3.3e-72
Identity = 148/193 (76.68%), Postives = 163/193 (84.46%), Query Frame = 0

Query: 1   MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKA--AFPA-VSEMDKDSTFHFISSQKE 60
           MLLRATIS TKKFFRKT+ NFKSFFSN+YHRLPKA   FPA VSEMDKDSTFHFIS  +E
Sbjct: 39  MLLRATISNTKKFFRKTIWNFKSFFSNTYHRLPKAPPPFPAVVSEMDKDSTFHFISPHEE 98

Query: 61  VQNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGSIKIGAIHQRKTQENLEYCSW 120
           VQNGSFMKNN PN A+H S   T+T+ E+QMERV+KNE  +KIG  HQRK QENLEYC W
Sbjct: 99  VQNGSFMKNNTPNAAVHLS---TSTMGESQMERVEKNEDRMKIGGTHQRKMQENLEYCRW 158

Query: 121 ERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSA 180
           +RRMCLVAK MKELEK+DARNVDH +DIEE+LHYYSRLTSPTFLE+VDKF +DIFAEFSA
Sbjct: 159 KRRMCLVAKNMKELEKLDARNVDHTLDIEEILHYYSRLTSPTFLEMVDKFVVDIFAEFSA 218

Query: 181 NSSSQQTLFPRNQ 191
            SSSQ T   R Q
Sbjct: 219 ISSSQPTQLTRIQ 228

BLAST of Clc06G09300 vs. ExPASy TrEMBL
Match: A0A0A0LTA6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G246600 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 2.1e-71
Identity = 144/186 (77.42%), Postives = 160/186 (86.02%), Query Frame = 0

Query: 1   MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKA--AFPAVSEMDKDSTFHFISSQKEV 60
           MLLRATIS TKKFFRKTL NFKSFFSN+YHRLPK    FPAVSEMDK+STFHFISSQ+EV
Sbjct: 1   MLLRATISNTKKFFRKTLWNFKSFFSNTYHRLPKVPPPFPAVSEMDKESTFHFISSQEEV 60

Query: 61  QNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGSIKIGAIHQRKTQENLEYCSWE 120
           QNGS MKNNNPN  +  S   T T+ ++Q ERV+K+E  +K GA HQRK +ENLEYCSW+
Sbjct: 61  QNGSIMKNNNPNAEVRLS---TCTMGDSQKERVEKSEDRMKTGATHQRKMEENLEYCSWK 120

Query: 121 RRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSAN 180
           RRMCLVAK MKELEK+DARNVDHA+DIEE+LHYYSRLTSPTFLEIVDKFF+DIF EFSA 
Sbjct: 121 RRMCLVAKNMKELEKLDARNVDHALDIEEILHYYSRLTSPTFLEIVDKFFVDIFTEFSAI 180

Query: 181 SSSQQT 185
           SSSQ T
Sbjct: 181 SSSQPT 183

BLAST of Clc06G09300 vs. ExPASy TrEMBL
Match: A0A6J1CV44 (uncharacterized protein LOC111014544 OS=Momordica charantia OX=3673 GN=LOC111014544 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 6.7e-57
Identity = 134/201 (66.67%), Postives = 154/201 (76.62%), Query Frame = 0

Query: 1   MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKA--AFPAVSEMDKDSTFHFISSQKEV 60
           MLLRA+IS TKKFF+KT+CNFKSFFS SYHRLPK    F A   M+KDSTF FISSQKEV
Sbjct: 1   MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGPRMEKDSTFQFISSQKEV 60

Query: 61  QNGSFMKNNNPNDALHFSKTTTTTIDEAQME--RVDKNEGSI-KIGAIHQRKTQENLE-- 120
           Q+G FMKNN  ++ALHF       ++E QME   VDK+ GS+  IGA HQRK QEN +  
Sbjct: 61  QSGGFMKNN--SNALHF----PNKMEETQMEIRVVDKSYGSMNNIGATHQRKRQENRDRE 120

Query: 121 ----YCSWERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFM 180
               Y   ERRMCLVAKK+KELEK+D+RNVDHA+DIEE+LHYYSRLT P +LEIVDKFF 
Sbjct: 121 SSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFT 180

Query: 181 DIFAEFSANSSSQ--QTLFPR 189
           +IFAEFSANSSSQ   T+ PR
Sbjct: 181 EIFAEFSANSSSQPCHTIKPR 195

BLAST of Clc06G09300 vs. ExPASy TrEMBL
Match: A0A6J1H9I9 (uncharacterized protein LOC111461329 OS=Cucurbita moschata OX=3662 GN=LOC111461329 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.6e-55
Identity = 128/186 (68.82%), Postives = 145/186 (77.96%), Query Frame = 0

Query: 1   MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKA--AFPAVSEMDKDSTFHFISSQKEV 60
           M+LRA+I+ TKKFF KTLCNFKSFFSN+Y RLPKA   F    EMDKDS           
Sbjct: 1   MMLRASIANTKKFFNKTLCNFKSFFSNTYQRLPKAPPPFSIGHEMDKDS----------- 60

Query: 61  QNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGSIKIGAIHQRKTQENLEYCSWE 120
              SFMKN+N N A+ FSK    T+DE QM++V+KNE SIKIG  HQRKTQENL+    E
Sbjct: 61  ---SFMKNSNGN-AVRFSK----TMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYD-E 120

Query: 121 RRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAEFSAN 180
           RRMCLVAKKMKELEK+DAR+VDHA+DIEE+LHYYSRL+ PT+LEIVDKFFMDIFAEF AN
Sbjct: 121 RRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCAN 166

Query: 181 SSSQQT 185
           SSSQQT
Sbjct: 181 SSSQQT 166

BLAST of Clc06G09300 vs. ExPASy TrEMBL
Match: A0A6J1IF62 (uncharacterized protein LOC111472233 OS=Cucurbita maxima OX=3661 GN=LOC111472233 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 3.7e-55
Identity = 128/194 (65.98%), Postives = 148/194 (76.29%), Query Frame = 0

Query: 1   MLLRATISTTKKFFRKTLCNFKSFFSNSYHRLPKAA--FPAVSEMDKDSTFHFISSQKEV 60
           M L  +ISTTKKFF+KT+CNFKSFFSN+YHRLPKAA  F A  EM KD          EV
Sbjct: 39  MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKAAPPFTAGPEMAKD----------EV 98

Query: 61  QNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGSIKIGAIHQRKTQENLE----- 120
           QNGSF K+N  N+A+HFSK    TID+ QM+RV+KNE SIKIGA HQRK+QEN E     
Sbjct: 99  QNGSFTKSNG-NNAVHFSK----TIDKTQMDRVEKNEQSIKIGATHQRKSQENRESRSKR 158

Query: 121 ----YCSWERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFM 180
               Y   ERR+CLVAKK+KELEK+DARNVDH++DIEE+LHYYSRLT PT+LEIVD FFM
Sbjct: 159 SRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFM 217

Query: 181 DIFAEFSANSSSQQ 184
           D+FAEF +NSSS Q
Sbjct: 219 DMFAEFCSNSSSSQ 217

BLAST of Clc06G09300 vs. TAIR 10
Match: AT3G24535.1 (unknown protein; Has 28 Blast hits to 27 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 66.2 bits (160), Expect = 3.2e-11
Identity = 51/181 (28.18%), Postives = 93/181 (51.38%), Query Frame = 0

Query: 1   MLLRATISTTKKFFRKTLCNFKSFFSN--SYHRLPKAAFPAVSEMDKDSTFHFISSQKEV 60
           M+LR++IS T+K F+KT+ NFKSFF N  +YH+LPK                        
Sbjct: 1   MVLRSSISNTRKLFQKTIDNFKSFFFNNGTYHKLPKT---------------------PN 60

Query: 61  QNGSFMKNNNPNDALHFSKTTTTTIDEAQMERVDKNEGSIKIGAIHQRKTQENLEYCSWE 120
              + + N++PN  +    T++++    Q +   K+  +    +  Q +  +  E    +
Sbjct: 61  NTSTNINNDHPNSNI---ITSSSSSIHKQFQPKPKDYVTTNKASSLQPRIGDRDETLFSQ 120

Query: 121 RRMCLVAKKMKELEKVDARNV----DHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFAE 176
            ++ LV  K+KE+EK+   ++     +  D+ E LH YSRL    +L++V+ FFM+++++
Sbjct: 121 PKVNLVRTKLKEMEKMMNDDIISDEYYVSDVIEFLHCYSRLRYTAYLDVVENFFMEVYSD 157

BLAST of Clc06G09300 vs. TAIR 10
Match: AT1G15260.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16070.1); Has 28 Blast hits to 28 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.9 bits (159), Expect = 4.2e-11
Identity = 36/91 (39.56%), Postives = 58/91 (63.74%), Query Frame = 0

Query: 104 HQRKTQENLE-YCSWERRMCLVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLE 163
           H++K ++  E +   ++R   +A+KMK+L  VD R+VDHA+D+ E L  YS + SP +L+
Sbjct: 85  HKKKPKKVAEPFEDAKKRGDALAQKMKDLNMVDLRDVDHALDVREALRCYSSIRSPVYLD 144

Query: 164 IVDKFFMDIFAEFSANSSSQQTLFPRNQWGN 194
           IVD FF D++ EFS   +S +    R + G+
Sbjct: 145 IVDNFFTDMYYEFSDPRTSAKINGSRRKAGS 175

BLAST of Clc06G09300 vs. TAIR 10
Match: AT3G16070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15260.1); Has 26 Blast hits to 26 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.1 bits (144), Expect = 2.3e-09
Identity = 52/171 (30.41%), Postives = 87/171 (50.88%), Query Frame = 0

Query: 14  FRKTLCNFKSFFSNSYHRLPKAAFPAVSEMDKDSTFHFISSQKEVQNGSFMKNNN-PNDA 73
           F+KT     SFF  + H L      A  ++ +  T HF        + +F ++N+   D 
Sbjct: 2   FQKT----NSFFHRTLHSLKSIIIRAGKKLPRPKT-HF--------SCTFCRSNSLDGDN 61

Query: 74  LHFSKTTTTTIDEAQMERVDKNEGSIKIGAIHQRKTQENLEY---------CSWERRMC- 133
           ++ S      I E+ +E  +  EG +K+    + K QE  +Y          S+  R C 
Sbjct: 62  IYAS---FLNIWESDLE--NSIEGPLKL----EHKVQEQEQYHQVKKTEACSSYSSRDCD 121

Query: 134 LVAKKMKELEKVDARNVDHAMDIEEVLHYYSRLTSPTFLEIVDKFFMDIFA 174
            + KK+ E+   +  +++ A+D+EE LHYYSR++SP +L IVDKFF D+++
Sbjct: 122 TMEKKINEMYMTETVDIEQALDVEEALHYYSRISSPVYLNIVDKFFTDLYS 150

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038880084.13.0e-7580.63uncharacterized protein LOC120071772 [Benincasa hispida][more]
XP_008463389.16.8e-7276.68PREDICTED: uncharacterized protein LOC103501556 [Cucumis melo][more]
XP_011655505.14.4e-7177.42uncharacterized protein LOC105435550 [Cucumis sativus][more]
XP_022145016.11.4e-5666.67uncharacterized protein LOC111014544 [Momordica charantia][more]
KAE8652951.18.9e-5672.22hypothetical protein Csa_017733 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3CJL13.3e-7276.68uncharacterized protein LOC103501556 OS=Cucumis melo OX=3656 GN=LOC103501556 PE=... [more]
A0A0A0LTA62.1e-7177.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G246600 PE=4 SV=1[more]
A0A6J1CV446.7e-5766.67uncharacterized protein LOC111014544 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A6J1H9I91.6e-5568.82uncharacterized protein LOC111461329 OS=Cucurbita moschata OX=3662 GN=LOC1114613... [more]
A0A6J1IF623.7e-5565.98uncharacterized protein LOC111472233 OS=Cucurbita maxima OX=3661 GN=LOC111472233... [more]
Match NameE-valueIdentityDescription
AT3G24535.13.2e-1128.18unknown protein; Has 28 Blast hits to 27 proteins in 8 species: Archae - 0; Bact... [more]
AT1G15260.14.2e-1139.56unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G16070.12.3e-0930.41unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35461:SF3BNAANNG14610D PROTEINcoord: 1..183
NoneNo IPR availablePANTHERPTHR35461BNAANNG14610D PROTEINcoord: 1..183

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc06G09300.1Clc06G09300.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane