Clc06G08030 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G08030
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Plant self-incompatibility protein S1 family
Location	ClcChr06: 8841255 .. 8841710 (+)
RNA-Seq Expression	Clc06G08030
Synteny	Clc06G08030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCCGGCCTCCGTCGCCGTTGTTGCTCAGTGTTTCCTGATATTCCTCCTGATGTCATCCACCATCGACAGTGGCGATGGCGGCAGCGACACACGAAGTCTAATTTACGACAAGGTCACAGTGACGATAAAGAATACTTTACCTGACAATAAGGTGGTAACCCTTCATTGCAAGTCCAAAGACGACGATCTCGGCTACCATGATCTTCGCCATTTGGACGGCTTCAACTTCCGATTCAGTCCCAACTTCTGGGGTACGACGTTGTTTTTTTGCAGCTTCAATTGGCCTGGTGCCTTGCATTACTTTGACATCTATGTCTTTAAAAGAGACATAAAGGTGTGTAAACCATACTGTTCTTGGAACATAACAGAAAAAGGGCCATGCTTGCAGCATCGTCATTTTTGTTTTCTGTCGATTAAGGACGATGATGCCAAACATATGTTGGGTGATTAA

mRNA sequence

ATGATTCCGGCCTCCGTCGCCGTTGTTGCTCAGTGTTTCCTGATATTCCTCCTGATGTCATCCACCATCGACAGTGGCGATGGCGGCAGCGACACACGAAGTCTAATTTACGACAAGGTCACAGTGACGATAAAGAATACTTTACCTGACAATAAGGTGGTAACCCTTCATTGCAAGTCCAAAGACGACGATCTCGGCTACCATGATCTTCGCCATTTGGACGGCTTCAACTTCCGATTCAGTCCCAACTTCTGGGGTACGACGTTGTTTTTTTGCAGCTTCAATTGGCCTGGTGCCTTGCATTACTTTGACATCTATGTCTTTAAAAGAGACATAAAGGTGTGTAAACCATACTGTTCTTGGAACATAACAGAAAAAGGGCCATGCTTGCAGCATCGTCATTTTTGTTTTCTGTCGATTAAGGACGATGATGCCAAACATATGTTGGGTGATTAA

Coding sequence (CDS)

ATGATTCCGGCCTCCGTCGCCGTTGTTGCTCAGTGTTTCCTGATATTCCTCCTGATGTCATCCACCATCGACAGTGGCGATGGCGGCAGCGACACACGAAGTCTAATTTACGACAAGGTCACAGTGACGATAAAGAATACTTTACCTGACAATAAGGTGGTAACCCTTCATTGCAAGTCCAAAGACGACGATCTCGGCTACCATGATCTTCGCCATTTGGACGGCTTCAACTTCCGATTCAGTCCCAACTTCTGGGGTACGACGTTGTTTTTTTGCAGCTTCAATTGGCCTGGTGCCTTGCATTACTTTGACATCTATGTCTTTAAAAGAGACATAAAGGTGTGTAAACCATACTGTTCTTGGAACATAACAGAAAAAGGGCCATGCTTGCAGCATCGTCATTTTTGTTTTCTGTCGATTAAGGACGATGATGCCAAACATATGTTGGGTGATTAA

Protein sequence

MIPASVAVVAQCFLIFLLMSSTIDSGDGGSDTRSLIYDKVTVTIKNTLPDNKVVTLHCKSKDDDLGYHDLRHLDGFNFRFSPNFWGTTLFFCSFNWPGALHYFDIYVFKRDIKVCKPYCSWNITEKGPCLQHRHFCFLSIKDDDAKHMLGD

Homology

[Close]

BLAST of Clc06G08030 vs. NCBI nr
Match: XP_024924731.1 (S-protein homolog 5-like [Ziziphus jujuba])

HSP 1 Score: 116.3 bits (290), Expect = 2.3e-22
Identity = 51/96 (53.12%), Postives = 65/96 (67.71%), Query Frame = 0


Query: 39  KVTVTIKNTLPDNKVVTLHCKSKDDDLGYHDLRHLDG-FNFRFSPNFWGTTLFFCSFNWP 98
           K  VTI N L  + V+T+HCKSKDDDLG H++ + DG ++F F PN WGTT ++C+F W 
Sbjct: 30  KEVVTIVNALGPDLVLTVHCKSKDDDLGIHNIPYKDGNYSFTFKPNIWGTTQYWCNFLWI 89

Query: 99  GALHYFDIYVFKRDIKVCKPYCSWNITEKGPCLQHR 134
           G  HYFDIY+  RD  +C   CSW I   GPCL +R
Sbjct: 90  GGNHYFDIYIDMRDYPICNNVCSWQIYPNGPCLYNR 125

[Close]

BLAST of Clc06G08030 vs. NCBI nr
Match: KAF8015470.1 (hypothetical protein BT93_H1093 [Corymbia citriodora subsp. variegata])

HSP 1 Score: 115.5 bits (288), Expect = 3.9e-22
Identity = 51/96 (53.12%), Postives = 62/96 (64.58%), Query Frame = 0


Query: 36  IYDKVTVTIKNTLPDNKVVTLHCKSKDDDLGYHDLRHLDGFNFRFSPNFWGTTLFFCSFN 95
           I ++V V I N LP    +T+HCKSKDDDLG+ ++     + FRF  NFWGTTLFFCSF 
Sbjct: 16  ISERVFVQIFNNLPGGVPLTVHCKSKDDDLGFQEIPTNGMWEFRFKGNFWGTTLFFCSFK 75

Query: 96  WPGALHYFDIYVFKRDIKVCKPYCSWNITEKGPCLQ 132
           W    HY+DIYV KRD   C+  C W +   GPCLQ
Sbjct: 76  WSDQFHYYDIYVEKRDFYRCRTLCQWCVQPTGPCLQ 111

[Close]

BLAST of Clc06G08030 vs. NCBI nr
Match: KAE9598027.1 (putative plant self-incompatibility S1 [Lupinus albus])

HSP 1 Score: 114.8 bits (286), Expect = 6.6e-22
Identity = 62/131 (47.33%), Postives = 77/131 (58.78%), Query Frame = 0


Query: 15  IFLLMSSTIDSGDGGSDTRSLIYDKVT-VTIKNTLPDNKVVTLHCKSKDDDLGYHDLRHL 74
           IFL    TI S  GGS+      DK   + IKN L     +T+HCKS+DDDLG H L++ 
Sbjct: 8   IFLFSLITIVSLVGGSEG---WLDKYRHIYIKNGLDKGTPLTIHCKSRDDDLGVHVLKYN 67

Query: 75  DGFNFRFSPNFWGTTLFFCSFNWPGALHYFDIYVFKRDIKVCKPYCSWNITEKGPCL--- 134
           + F F+F  NF  +TLFFC F W G LH+FDIY + RD KVC P C W+IT + PCL   
Sbjct: 68  EEFKFQFQINFHQSTLFFCGFTWDGKLHWFDIYDWSRDKKVCSPDCKWSITRENPCLYDY 127

Query: 135 --QHRHFCFLS 140
             Q    C+ S
Sbjct: 128 DTQKYELCYYS 135

[Close]

BLAST of Clc06G08030 vs. NCBI nr
Match: KAF8012359.1 (hypothetical protein BT93_I0492 [Corymbia citriodora subsp. variegata])

HSP 1 Score: 112.8 bits (281), Expect = 2.5e-21
Identity = 49/93 (52.69%), Postives = 63/93 (67.74%), Query Frame = 0


Query: 41  TVTIKNTLPDNKVVTLHCKSKDDDLGYHDLRHLDGFNFRFSPNFWGTTLFFCSFNWPGAL 100
           +V I N LP   ++T+HCKSKDDDLG H++   + + F F PN WGTTLFFCSF WPG+ 
Sbjct: 22  SVQIVNNLPGGLLLTIHCKSKDDDLGIHEISSGNQWGFPFKPNIWGTTLFFCSFQWPGSF 81

Query: 101 HYFDIYVFKRDIKVCKPYCSWNITEKGPCLQHR 134
           ++FD+Y   RD   C  YC WNI   GPCL ++
Sbjct: 82  YHFDVYDDGRDHGRCS-YCVWNIKPTGPCLYNK 113

[Close]

BLAST of Clc06G08030 vs. NCBI nr
Match: KCW58636.1 (hypothetical protein EUGRSUZ_H01296 [Eucalyptus grandis])

HSP 1 Score: 112.5 bits (280), Expect = 3.3e-21
Identity = 47/95 (49.47%), Postives = 61/95 (64.21%), Query Frame = 0


Query: 36  IYDKVTVTIKNTLPDNKVVTLHCKSKDDDLGYHDLRHLDGFNFRFSPNFWGTTLFFCSFN 95
           I  KV V I N LP    +T+HC+SKD+DLG+H +     + FRF PNFWG TLFFCSF 
Sbjct: 16  IAGKVRVQILNDLPGGVTLTVHCQSKDNDLGFHQIPPNGMWEFRFKPNFWGNTLFFCSFQ 75

Query: 96  WPGALHYFDIYVFKRDIKVCKPYCSWNITEKGPCL 131
           WP   H+ D++V  RD+  C+  C W++   GPCL
Sbjct: 76  WPNQFHHHDVFVEDRDVVRCQGLCQWHVKPLGPCL 110

[Close]

BLAST of Clc06G08030 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.6e-18
Identity = 52/127 (40.94%), Postives = 64/127 (50.39%), Query Frame = 0


Query: 12  CFLIFLLMSSTIDSGDGGSDTRSLIYDKVTVTIKNTLPDNKVVTLHCKSKDDDLGYHDLR 71
           CF  FLL      SG GG       + + TV     L     +T+HCKSK DDLG H + 
Sbjct: 8   CFFFFLLFG----SGYGGLPP----FWRATVVTMTNLIGGPPLTIHCKSKQDDLGIHVVP 67

Query: 72  HLDGFNFRFSPNFWGTTLFFCSFNWPGALHYFDIYVFKRDIKVCKPYCSWNITEKGPC-L 131
               ++F+F PN W +TLFFCSF W      FDIY  +RD  +C   C W I   GPC L
Sbjct: 68  FKQEYHFKFQPNLWKSTLFFCSFQWDSQFKSFDIYDAQRDQGICDD-CQWEIKPDGPCRL 125

Query: 132 QHRHFCF 138
             +  CF
Sbjct: 128 GKKAKCF 125

[Close]

BLAST of Clc06G08030 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 9.6e-16
Identity = 48/131 (36.64%), Postives = 66/131 (50.38%), Query Frame = 0


Query: 13  FLIFLLMSSTIDSGDGGSD---------TRSLI-YDKVTVTIKNTLPDNKVVTLHCKSKD 72
           F++ + +++ +   D  +D         T S+    K TV I N L +   +  HCKSKD
Sbjct: 11  FILIIFITTKLSQADHKNDIPVPNDPSSTNSVFPTSKRTVEINNDLGNQLTLLYHCKSKD 70

Query: 73  DDLGYHDLRHLDGFNFRFSPNFWGTTLFFCSFNWPGALHYFDIYVFKRDI----KVCKPY 130
           DDLG   L+  + ++F F   F+G TL+FCSF+WP   H FDIY   RD     K     
Sbjct: 71  DDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDHRDSGGDNKCESDR 130

[Close]

BLAST of Clc06G08030 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.8e-15
Identity = 54/133 (40.60%), Postives = 71/133 (53.38%), Query Frame = 0


Query: 1   MIPASVAVVAQCFLIFLLMSSTIDSGDGGSDTRSLIYDKVTVTIKNTLPDNKVVTLHCKS 60
           M+   V VV    +I+LL+         GSD +     K  VTI N L D   + LHCKS
Sbjct: 4   MLKTQVHVV----VIYLLIQIAFSQVKPGSDLKWSTL-KSVVTITNRLGDGSTLKLHCKS 63

Query: 61  KDDDLGYHDLRHLDGFNFRFSPNFW-GTTLFFCSFNWPGALHYFDIYVFKRD-IKVCKP- 120
            DDDLG   L     ++F+F P+   G TLFFC F WPG   +F+IY   RD +++  P 
Sbjct: 64  ADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWPGQSKWFNIYDDDRDGVRMGIPC 123

Query: 121 -YCSWNITEKGPC 130
            YC W+I + GPC
Sbjct: 124 IYCIWDIGKYGPC 131

[Close]

BLAST of Clc06G08030 vs. ExPASy Swiss-Prot
Match: Q3E9W6 (S-protein homolog 20 OS=Arabidopsis thaliana OX=3702 GN=SPH20 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.6e-15
Identity = 44/100 (44.00%), Postives = 53/100 (53.00%), Query Frame = 0


Query: 40  VTVTIKNTLPDNKVVTLHCKSKDDDLGYHDLRHLDGFNFRFSPNFWGTTLFFCSFNWPGA 99
           V V I N +  N  + LHCKSKD DLG   L     + FR + +FWG TLFFC F W   
Sbjct: 30  VNVDIINDIGPNVQLGLHCKSKDKDLGPQSLAPQQHWGFRKTLDFWGVTLFFCHFEWENQ 89

Query: 100 LHYFDIYVFKRDIKVCKPY-CSWNITEKGPC-LQHRHFCF 138
             +FDI V  RD   C  + C W+I   GPC L  +  CF
Sbjct: 90  SKWFDILVAGRDRNTCAEHPCVWSIRPSGPCRLTGKEKCF 129

[Close]

BLAST of Clc06G08030 vs. ExPASy Swiss-Prot
Match: B3H7A6 (S-protein homolog 19 OS=Arabidopsis thaliana OX=3702 GN=SPH19 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 8.1e-15
Identity = 43/99 (43.43%), Postives = 53/99 (53.54%), Query Frame = 0


Query: 40  VTVTIKNTLPDNKVVTLHCKSKDDDLGYHDLRHLDGFNFRFSPNFWGTTLFFCSFNWPGA 99
           V V + N +  N  + LHCKSK+ DLG   L     + FR S  FW  TLFFC F W   
Sbjct: 29  VNVDLINDIGPNVQLGLHCKSKNKDLGSQSLVSDQHWGFRASLGFWTVTLFFCHFEWENQ 88

Query: 100 LHYFDIYVFKRDIKVCKPYCSWNITEKGPC-LQHRHFCF 138
             +FDI+V  RD+  C  +C W+I   GPC L  R  CF
Sbjct: 89  SKWFDIFVEDRDL-TCGDHCVWSIRPSGPCRLTGREKCF 126

[Close]

BLAST of Clc06G08030 vs. ExPASy TrEMBL
Match: A0A6P6FT49 (S-protein homolog OS=Ziziphus jujuba OX=326968 GN=LOC112489864 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.1e-22
Identity = 51/96 (53.12%), Postives = 65/96 (67.71%), Query Frame = 0


Query: 39  KVTVTIKNTLPDNKVVTLHCKSKDDDLGYHDLRHLDG-FNFRFSPNFWGTTLFFCSFNWP 98
           K  VTI N L  + V+T+HCKSKDDDLG H++ + DG ++F F PN WGTT ++C+F W 
Sbjct: 30  KEVVTIVNALGPDLVLTVHCKSKDDDLGIHNIPYKDGNYSFTFKPNIWGTTQYWCNFLWI 89

Query: 99  GALHYFDIYVFKRDIKVCKPYCSWNITEKGPCLQHR 134
           G  HYFDIY+  RD  +C   CSW I   GPCL +R
Sbjct: 90  GGNHYFDIYIDMRDYPICNNVCSWQIYPNGPCLYNR 125

[Close]

BLAST of Clc06G08030 vs. ExPASy TrEMBL
Match: A0A6A4PDZ5 (S-protein homolog OS=Lupinus albus OX=3870 GN=Lalb_Chr15g0076181 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 3.2e-22
Identity = 62/131 (47.33%), Postives = 77/131 (58.78%), Query Frame = 0


Query: 15  IFLLMSSTIDSGDGGSDTRSLIYDKVT-VTIKNTLPDNKVVTLHCKSKDDDLGYHDLRHL 74
           IFL    TI S  GGS+      DK   + IKN L     +T+HCKS+DDDLG H L++ 
Sbjct: 8   IFLFSLITIVSLVGGSEG---WLDKYRHIYIKNGLDKGTPLTIHCKSRDDDLGVHVLKYN 67

Query: 75  DGFNFRFSPNFWGTTLFFCSFNWPGALHYFDIYVFKRDIKVCKPYCSWNITEKGPCL--- 134
           + F F+F  NF  +TLFFC F W G LH+FDIY + RD KVC P C W+IT + PCL   
Sbjct: 68  EEFKFQFQINFHQSTLFFCGFTWDGKLHWFDIYDWSRDKKVCSPDCKWSITRENPCLYDY 127

Query: 135 --QHRHFCFLS 140
             Q    C+ S
Sbjct: 128 DTQKYELCYYS 135

[Close]

BLAST of Clc06G08030 vs. ExPASy TrEMBL
Match: A0A059AYA1 (S-protein homolog OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H01296 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.6e-21
Identity = 47/95 (49.47%), Postives = 61/95 (64.21%), Query Frame = 0


Query: 36  IYDKVTVTIKNTLPDNKVVTLHCKSKDDDLGYHDLRHLDGFNFRFSPNFWGTTLFFCSFN 95
           I  KV V I N LP    +T+HC+SKD+DLG+H +     + FRF PNFWG TLFFCSF 
Sbjct: 16  IAGKVRVQILNDLPGGVTLTVHCQSKDNDLGFHQIPPNGMWEFRFKPNFWGNTLFFCSFQ 75

Query: 96  WPGALHYFDIYVFKRDIKVCKPYCSWNITEKGPCL 131
           WP   H+ D++V  RD+  C+  C W++   GPCL
Sbjct: 76  WPNQFHHHDVFVEDRDVVRCQGLCQWHVKPLGPCL 110

[Close]

BLAST of Clc06G08030 vs. ExPASy TrEMBL
Match: A0A218Y0Z8 (S-protein homolog OS=Punica granatum OX=22663 GN=CDL15_Pgr021045 PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 2.1e-21
Identity = 58/126 (46.03%), Postives = 69/126 (54.76%), Query Frame = 0


Query: 13  FLIFLLMSSTIDSGDG--------GSDTRSLIYDKVTVTIKNTLPDNKVVTLHCKSKDDD 72
           F + LL+  T  +  G            R L Y +  V I N LP +  +T+HCKSKDDD
Sbjct: 7   FTVLLLLEGTSGAEPGLRSLHFHSAQSKRFLTYPEQHVVIINDLPFDADLTVHCKSKDDD 66

Query: 73  LGYHDLRHLDGFNFRFSPNFWGTTLFFCSFNWPGALHYFDIYVFKRDIKVCKPYCSWNIT 131
           LG   LR    F F F P+FW  TLFFCSF W G  HY+DIYV KRD+  C   C W+I 
Sbjct: 67  LGVQLLRPQGRFQFHFYPSFWRNTLFFCSFKWTGGFHYYDIYVQKRDVDRCAA-CMWSIV 126

[Close]

BLAST of Clc06G08030 vs. ExPASy TrEMBL
Match: A0A438C5D9 (S-protein homolog OS=Vitis vinifera OX=29760 GN=SPH3_2 PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.7e-21
Identity = 58/125 (46.40%), Postives = 71/125 (56.80%), Query Frame = 0


Query: 16  FLLMSSTIDSGDGGSDTRSLIYDKVTVTIKNTLPDNKVVTLHCKSKDDDLGYHDLRHLDG 75
           F+L+   +   DGG     +I +KV + I N L     + LHC+SKDDDLG H L     
Sbjct: 11  FVLLVLLVRLCDGGP---WVIENKVDLRITNDLGTGADLNLHCQSKDDDLGTHVLAPNQF 70

Query: 76  FNFRFSPNFWGTTLFFCSFNWPGALHYFDIYVFKRDIKVCKPYCSWNITEKGPCLQHRHF 135
           F FRF PNFWGTTL+FC F W G  H+F+IYV KRD   C   C W +   GPCL  R F
Sbjct: 71  FEFRFRPNFWGTTLYFCKFWWGGESHWFNIYVEKRDTSRCDSKCWWMVGPVGPCLLDRRF 130

Query: 136 CFLSI 141
              S+
Sbjct: 131 GIYSL 132

[Close]

BLAST of Clc06G08030 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 94.0 bits (232), Expect = 1.1e-19
Identity = 52/127 (40.94%), Postives = 64/127 (50.39%), Query Frame = 0


Query: 12  CFLIFLLMSSTIDSGDGGSDTRSLIYDKVTVTIKNTLPDNKVVTLHCKSKDDDLGYHDLR 71
           CF  FLL      SG GG       + + TV     L     +T+HCKSK DDLG H + 
Sbjct: 8   CFFFFLLFG----SGYGGLPP----FWRATVVTMTNLIGGPPLTIHCKSKQDDLGIHVVP 67

Query: 72  HLDGFNFRFSPNFWGTTLFFCSFNWPGALHYFDIYVFKRDIKVCKPYCSWNITEKGPC-L 131
               ++F+F PN W +TLFFCSF W      FDIY  +RD  +C   C W I   GPC L
Sbjct: 68  FKQEYHFKFQPNLWKSTLFFCSFQWDSQFKSFDIYDAQRDQGICDD-CQWEIKPDGPCRL 125

Query: 132 QHRHFCF 138
             +  CF
Sbjct: 128 GKKAKCF 125

[Close]

BLAST of Clc06G08030 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 84.7 bits (208), Expect = 6.8e-17
Identity = 48/131 (36.64%), Postives = 66/131 (50.38%), Query Frame = 0


Query: 13  FLIFLLMSSTIDSGDGGSD---------TRSLI-YDKVTVTIKNTLPDNKVVTLHCKSKD 72
           F++ + +++ +   D  +D         T S+    K TV I N L +   +  HCKSKD
Sbjct: 11  FILIIFITTKLSQADHKNDIPVPNDPSSTNSVFPTSKRTVEINNDLGNQLTLLYHCKSKD 70

Query: 73  DDLGYHDLRHLDGFNFRFSPNFWGTTLFFCSFNWPGALHYFDIYVFKRDI----KVCKPY 130
           DDLG   L+  + ++F F   F+G TL+FCSF+WP   H FDIY   RD     K     
Sbjct: 71  DDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDHRDSGGDNKCESDR 130

[Close]

BLAST of Clc06G08030 vs. TAIR 10
Match: AT5G12070.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 83.2 bits (204), Expect = 2.0e-16
Identity = 54/133 (40.60%), Postives = 71/133 (53.38%), Query Frame = 0


Query: 1   MIPASVAVVAQCFLIFLLMSSTIDSGDGGSDTRSLIYDKVTVTIKNTLPDNKVVTLHCKS 60
           M+   V VV    +I+LL+         GSD +     K  VTI N L D   + LHCKS
Sbjct: 4   MLKTQVHVV----VIYLLIQIAFSQVKPGSDLKWSTL-KSVVTITNRLGDGSTLKLHCKS 63

Query: 61  KDDDLGYHDLRHLDGFNFRFSPNFW-GTTLFFCSFNWPGALHYFDIYVFKRD-IKVCKP- 120
            DDDLG   L     ++F+F P+   G TLFFC F WPG   +F+IY   RD +++  P 
Sbjct: 64  ADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWPGQSKWFNIYDDDRDGVRMGIPC 123

Query: 121 -YCSWNITEKGPC 130
            YC W+I + GPC
Sbjct: 124 IYCIWDIGKYGPC 131

[Close]

BLAST of Clc06G08030 vs. TAIR 10
Match: AT4G24975.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 82.8 bits (203), Expect = 2.6e-16
Identity = 44/100 (44.00%), Postives = 53/100 (53.00%), Query Frame = 0


Query: 40  VTVTIKNTLPDNKVVTLHCKSKDDDLGYHDLRHLDGFNFRFSPNFWGTTLFFCSFNWPGA 99
           V V I N +  N  + LHCKSKD DLG   L     + FR + +FWG TLFFC F W   
Sbjct: 30  VNVDIINDIGPNVQLGLHCKSKDKDLGPQSLAPQQHWGFRKTLDFWGVTLFFCHFEWENQ 89

Query: 100 LHYFDIYVFKRDIKVCKPY-CSWNITEKGPC-LQHRHFCF 138
             +FDI V  RD   C  + C W+I   GPC L  +  CF
Sbjct: 90  SKWFDILVAGRDRNTCAEHPCVWSIRPSGPCRLTGKEKCF 129

[Close]

BLAST of Clc06G08030 vs. TAIR 10
Match: AT4G24974.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 81.6 bits (200), Expect = 5.8e-16
Identity = 43/99 (43.43%), Postives = 53/99 (53.54%), Query Frame = 0


Query: 40  VTVTIKNTLPDNKVVTLHCKSKDDDLGYHDLRHLDGFNFRFSPNFWGTTLFFCSFNWPGA 99
           V V + N +  N  + LHCKSK+ DLG   L     + FR S  FW  TLFFC F W   
Sbjct: 29  VNVDLINDIGPNVQLGLHCKSKNKDLGSQSLVSDQHWGFRASLGFWTVTLFFCHFEWENQ 88

Query: 100 LHYFDIYVFKRDIKVCKPYCSWNITEKGPC-LQHRHFCF 138
             +FDI+V  RD+  C  +C W+I   GPC L  R  CF
Sbjct: 89  SKWFDIFVEDRDL-TCGDHCVWSIRPSGPCRLTGREKCF 126

The following BLAST results are available for this feature:

BLAST of Clc06G08030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_024924731.1	2.3e-22	53.13	S-protein homolog 5-like [Ziziphus jujuba]	[more]
KAF8015470.1	3.9e-22	53.13	hypothetical protein BT93_H1093 [Corymbia citriodora subsp. variegata]	[more]
KAE9598027.1	6.6e-22	47.33	putative plant self-incompatibility S1 [Lupinus albus]	[more]
KAF8012359.1	2.5e-21	52.69	hypothetical protein BT93_I0492 [Corymbia citriodora subsp. variegata]	[more]
KCW58636.1	3.3e-21	49.47	hypothetical protein EUGRSUZ_H01296 [Eucalyptus grandis]	[more]

BLAST of Clc06G08030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23020	1.6e-18	40.94	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]
F4JLQ5	9.6e-16	36.64	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
F4JZG1	2.8e-15	40.60	S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1	[more]
Q3E9W6	3.6e-15	44.00	S-protein homolog 20 OS=Arabidopsis thaliana OX=3702 GN=SPH20 PE=2 SV=1	[more]
B3H7A6	8.1e-15	43.43	S-protein homolog 19 OS=Arabidopsis thaliana OX=3702 GN=SPH19 PE=3 SV=1	[more]

BLAST of Clc06G08030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6P6FT49	1.1e-22	53.13	S-protein homolog OS=Ziziphus jujuba OX=326968 GN=LOC112489864 PE=3 SV=1	[more]
A0A6A4PDZ5	3.2e-22	47.33	S-protein homolog OS=Lupinus albus OX=3870 GN=Lalb_Chr15g0076181 PE=3 SV=1	[more]
A0A059AYA1	1.6e-21	49.47	S-protein homolog OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H01296 PE=3 SV=1	[more]
A0A218Y0Z8	2.1e-21	46.03	S-protein homolog OS=Punica granatum OX=22663 GN=CDL15_Pgr021045 PE=3 SV=1	[more]
A0A438C5D9	2.7e-21	46.40	S-protein homolog OS=Vitis vinifera OX=29760 GN=SPH3_2 PE=3 SV=1	[more]

BLAST of Clc06G08030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04645.1	1.1e-19	40.94	Plant self-incompatibility protein S1 family	[more]
AT4G16195.1	6.8e-17	36.64	Plant self-incompatibility protein S1 family	[more]
AT5G12070.1	2.0e-16	40.60	Plant self-incompatibility protein S1 family	[more]
AT4G24975.1	2.6e-16	44.00	Plant self-incompatibility protein S1 family	[more]
AT4G24974.1	5.8e-16	43.43	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 41..132 e-value: 3.5E-27 score: 94.9
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 13..133
None	No IPR available	PANTHER	PTHR31232:SF76	S-PROTEIN HOMOLOG 2	coord: 13..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G08030.1	Clc06G08030.1	mRNA