Clc06G07780 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G07780
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Auxin-responsive protein
Location	ClcChr06: 8492688 .. 8495214 (+)
RNA-Seq Expression	Clc06G07780
Synteny	Clc06G07780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGGTAGGCGCACCACCAGACATTCTGACCCCACCACTTCCCTTCTCTCTCTACTCTTCTTCAATCCATGGTGTAACAGTTCCTTTCTTCTTCAATACCCTCTTAATCCCCATTCTCTTCCATTCCATATCCCATTCTCTGAAACTTCCCCTCTTTTCTAATAACCAATTTTCTCCATGGAATGTACTTTGGGCCTTTTCCGCCCTTCTGCTGCTGCTGGGTCTGTTTCTGGGTCCGCCATTAACGACCCCAATCCCTCCACAATCGACATTCTTCAGAAAGATTTTGTGGGTAAGACTCCCATTCAGTCCTCTCCCTCTCCTGCTTCCTCTGACCTCGAATTGGGCCTTGGTTTAGCCCTTGGCCCCGGTGGCGGTGGCGGTGGCGGGAAGGTTAATGGTGGTACTTGGGGTGAGCGTGGTCGGATTTTGACTGCTCAGGATTTTCCTGTTCATGGTGGCTCTTCTTCTACGTCTTCTTCTTCCTCTTCCTCTTCTCGTTTCCATGGAAGAGAGGCTAATGGTTCTGTTGCTGTTTCTGGAACTAAAAGAGCTGCTGACTCTGCTCCTAATGAAGGAGGATCATCCCCCACTGCTCTCAAGTTAGTTCTGATTTCCCCCTTTTGTTTGTTTTTATAGCTACACTTTTTTTTTCTTTCTTTTTATGGAACTGAAATTAACATGGGGGAAAACTTGGGAATCTGTTGACTCCTTTTTTCTCTGGATTTGATATGTGTCTTGCCATTTTTGGGAGTTTTCTGATGAGCTTGTTGTAAATCTCTGTTTAAAAATGGAAGCAGTCAAGTTGTGGGATGGCCACCCATTAGGACATACAGGATGAACAGCTTGGTCAACCAAGCTAAGACAGCCAGGGCTGAGGAAGATGATGTTGTCTGTGAGGAGAAGAAAGATCAGTCTAAGGACAGTTTGAAGAACAAAACATGTGATGTTGATGGAAAAGGGCACTTGGGATTTGTCAAAGTGAATGTGGATGGGGTTGTGATAGGGAGGAAGGTGGATCTCAATGCCCATTCTTGCTATGAGACCTTGGCCCTGATGCTGGAGGACATGTTTTTCAGGTCTGGAGGAGCCTCCATTCCCAATGGTTAGTTTTTGTCTCAGTTTGGAATTTCAGCTTCAACAGTTCATTAACGAACGTGAGACCAAAAATTTTCATTTTTTTCCTTTCATTTATTTATGTTGTCATGGTGTTTCTCAGGGCAAAGTGGAGACAAAGAACAAGCAAGGAAGTTGTCTAAGCTTTTGGATGGATCCTCTGAGTTTGTGCTCACATATGAAGATAGAGAGGGAGATTGGATGCTAGTTGGAGATGTCCCTTGGGGGTATGTTACTTTACTTACTAGTCTAGATCTCATTTCAATCTTTTAGAATTATGGAGGACCAAATATAATTGAATGTTGTGCAGAAGTTGGATGAGATTTAAGAGAATTTGATTGTCTGCTTATGTTCTGCTATAACGATGCCTGCTTCCGACTCTTGGTTCTAGAATCTTGCAAACTTTTCTAAGAAAGAGAATAAGTTGAACTAGTTTGATGAAGAAAAATTTGAGTCACTTGGCATATTTAATTCCCTTTTGATTCATAAGATGCAACTTAGTCTTTTGTGTCTTACGAATGAAGAAGATGTGTTACAAAACGGCTCAAGATTTGAGAAGATCCATATACATTTATGATCTTGTTTGACTAGATCAATGCACTGTTGGCTCTTGTTTTAAAGTCTTGCTATGTTTTCAAATGGAAAAAAGGTTTGGATCATCTCCAATTCCATCCATCAAAGTGGAAAAGAGATGGATGGGTCGAAGCTAAACATTTGAACCGTACTTTTGATTCAACTTTGCTCTTTTATGTCATTTCTCACATTAAGTTCATGATTTTCATTGATTAGGATGTTCGTGTGCTCTGTTCGACGACTTCGCATAATGAGGACATCTGAAGCCAACGGACTAGGTAGTCGATAAGTTCTTCTTGCACTCAACTTCCTATTTTCTCCTCATTTCACATGTTTCCTAAACCTAGCTAGCTTCATTGCAGCACCAAGATCTCAAGACAAGCAAGTGAAACAAAGGAGCAAGCCTATCTGAAAAACACCACTGTCTGTCTCCAGTACATCCTAGATCTACCCAAACCTGAAAAACAAAAAAATGCACAGTTTGACTACAGAACAGAAGTAGAGAAGACAATGAGAAATGGATTGCTGTTGAAAGATTTACATTTACATCTACTTTTTTTGCTTTTTTTGTTGGCTTTATTTTTGGTCTTTTGGGATTTTGAAGTGTTTCAAAGCTGGTTCTCTTCTTGCTGGCCTTAATTTTTCTTTTCTTTTCTTTTCTTTTTTTGGGTTTTATAGGCCACATGATTTTAGCCCTTAAAATCTCTTATTATAGAGTGGTTACCATACAAAAGTGTATACTTTGGGTGGATGCTTTCTCATACTGTACATAAGGGAACAACACTTTGATTGATATCTATGGAGTTGAGTTTGTTGCATTTTGCTGCTAAATGAG

mRNA sequence

ATGAGTGGCGCACCACCAGACATTCTGACCCCACCACTTCCCTTCTCTCTCTACTCTTCTTCAATCCATGGTGTAACAGTTCCTTTCTTCTTCAATACCCTCTTAATCCCCATTCTCTTCCATTCCATATCCCATTCTCTGAAACTTCCCCTCTTTTCTAATAACCAATTTTCTCCATGGAATGTACTTTGGGCCTTTTCCGCCCTTCTGCTGCTGCTGGGTCTGTTTCTGGGTCCGCCATTAACGACCCCAATCCCTCCACAATCGACATTCTTCAGAAAGATTTTGTGGACTCCCATTCAGTCCTCTCCCTCTCCTGCTTCCTCTGACCTCGAATTGGGCCTTGGTTTAGCCCTTGGCCCCGGTGGCGGTGGCGGTGGCGGGAAGGTTAATGGTGGTACTTGGGGTGAGCGTGGTCGGATTTTGACTGCTCAGGATTTTCCTGTTCATGGTGGCTCTTCTTCTACGTCTTCTTCTTCCTCTTCCTCTTCTCGTTTCCATGGAAGAGAGGCTAATGGTTCTGTTGCTGTTTCTGGAACTAAAAGAGCTGCTGACTCTGCTCCTAATGAAGGAGGATCATCCCCCACTGCTCTCAATCAAGTTGTGGGATGGCCACCCATTAGGACATACAGGATGAACAGCTTGGTCAACCAAGCTAAGACAGCCAGGGCTGAGGAAGATGATGTTGTCTGTGAGGAGAAGAAAGATCAGTCTAAGGACAGTTTGAAGAACAAAACATGTGATGTTGATGGAAAAGGGCACTTGGGATTTGTCAAAGTGAATGTGGATGGGGTTGTGATAGGGAGGAAGGTGGATCTCAATGCCCATTCTTGCTATGAGACCTTGGCCCTGATGCTGGAGGACATGTTTTTCAGGTCTGGAGGAGCCTCCATTCCCAATGGGCAAAGTGGAGACAAAGAACAAGCAAGGAAGTTGTCTAAGCTTTTGGATGGATCCTCTGAGTTTGTGCTCACATATGAAGATAGAGAGGGAGATTGGATGCTAGTTGGAGATGTCCCTTGGGGGATGTTCGTGTGCTCTGTTCGACGACTTCGCATAATGAGGACATCTGAAGCCAACGGACTAGCACCAAGATCTCAAGACAAGCAAGTGAAACAAAGGAGCAAGCCTATCTGAAAAACACCACTGTCTGTCTCCAGTACATCCTAGATCTACCCAAACCTGAAAAACAAAAAAATGCACAGTTTGACTACAGAACAGAAGTAGAGAAGACAATGAGAAATGGATTGCTGTTGAAAGATTTACATTTACATCTACTTTTTTTGCTTTTTTTGTTGGCTTTATTTTTGGTCTTTTGGGATTTTGAAGTGTTTCAAAGCTGGTTCTCTTCTTGCTGGCCTTAATTTTTCTTTTCTTTTCTTTTCTTTTTTTGGGTTTTATAGGCCACATGATTTTAGCCCTTAAAATCTCTTATTATAGAGTGGTTACCATACAAAAGTGTATACTTTGGGTGGATGCTTTCTCATACTGTACATAAGGGAACAACACTTTGATTGATATCTATGGAGTTGAGTTTGTTGCATTTTGCTGCTAAATGAG

Coding sequence (CDS)

ATGAGTGGCGCACCACCAGACATTCTGACCCCACCACTTCCCTTCTCTCTCTACTCTTCTTCAATCCATGGTGTAACAGTTCCTTTCTTCTTCAATACCCTCTTAATCCCCATTCTCTTCCATTCCATATCCCATTCTCTGAAACTTCCCCTCTTTTCTAATAACCAATTTTCTCCATGGAATGTACTTTGGGCCTTTTCCGCCCTTCTGCTGCTGCTGGGTCTGTTTCTGGGTCCGCCATTAACGACCCCAATCCCTCCACAATCGACATTCTTCAGAAAGATTTTGTGGACTCCCATTCAGTCCTCTCCCTCTCCTGCTTCCTCTGACCTCGAATTGGGCCTTGGTTTAGCCCTTGGCCCCGGTGGCGGTGGCGGTGGCGGGAAGGTTAATGGTGGTACTTGGGGTGAGCGTGGTCGGATTTTGACTGCTCAGGATTTTCCTGTTCATGGTGGCTCTTCTTCTACGTCTTCTTCTTCCTCTTCCTCTTCTCGTTTCCATGGAAGAGAGGCTAATGGTTCTGTTGCTGTTTCTGGAACTAAAAGAGCTGCTGACTCTGCTCCTAATGAAGGAGGATCATCCCCCACTGCTCTCAATCAAGTTGTGGGATGGCCACCCATTAGGACATACAGGATGAACAGCTTGGTCAACCAAGCTAAGACAGCCAGGGCTGAGGAAGATGATGTTGTCTGTGAGGAGAAGAAAGATCAGTCTAAGGACAGTTTGAAGAACAAAACATGTGATGTTGATGGAAAAGGGCACTTGGGATTTGTCAAAGTGAATGTGGATGGGGTTGTGATAGGGAGGAAGGTGGATCTCAATGCCCATTCTTGCTATGAGACCTTGGCCCTGATGCTGGAGGACATGTTTTTCAGGTCTGGAGGAGCCTCCATTCCCAATGGGCAAAGTGGAGACAAAGAACAAGCAAGGAAGTTGTCTAAGCTTTTGGATGGATCCTCTGAGTTTGTGCTCACATATGAAGATAGAGAGGGAGATTGGATGCTAGTTGGAGATGTCCCTTGGGGGATGTTCGTGTGCTCTGTTCGACGACTTCGCATAATGAGGACATCTGAAGCCAACGGACTAGCACCAAGATCTCAAGACAAGCAAGTGAAACAAAGGAGCAAGCCTATCTGA

Protein sequence

MSGAPPDILTPPLPFSLYSSSIHGVTVPFFFNTLLIPILFHSISHSLKLPLFSNNQFSPWNVLWAFSALLLLLGLFLGPPLTTPIPPQSTFFRKILWTPIQSSPSPASSDLELGLGLALGPGGGGGGGKVNGGTWGERGRILTAQDFPVHGGSSSTSSSSSSSSRFHGREANGSVAVSGTKRAADSAPNEGGSSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDDVVCEEKKDQSKDSLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHSCYETLALMLEDMFFRSGGASIPNGQSGDKEQARKLSKLLDGSSEFVLTYEDREGDWMLVGDVPWGMFVCSVRRLRIMRTSEANGLAPRSQDKQVKQRSKPI

Homology

[Close]

BLAST of Clc06G07780 vs. NCBI nr
Match: XP_038906654.1 (auxin-responsive protein IAA13-like isoform X2 [Benincasa hispida])

HSP 1 Score: 486.5 bits (1251), Expect = 2.1e-133
Identity = 259/280 (92.50%), Postives = 263/280 (93.93%), Query Frame = 0


Query: 99  PIQSSPSPASSDLELGLGLALGPGGGGGGGKVNGGTWGERGRILTAQDFPVHGGSSSTSS 158
           PI SSPSPASSDLELGLGLAL     GGGGKVNGG WGERGRILTAQDFPVH GSSSTSS
Sbjct: 42  PIHSSPSPASSDLELGLGLAL-----GGGGKVNGGIWGERGRILTAQDFPVHCGSSSTSS 101

Query: 159 SSSSSSRFHGREANGSVAVSGTKRAADSAPNEGGSSPTALNQVVGWPPIRTYRMNSLVNQ 218
           SSSSSSRFHGREANGS   SGTKRAADSAPNEGG SPTALNQVVGWPPIRTYRMNSLVNQ
Sbjct: 102 SSSSSSRFHGREANGS--FSGTKRAADSAPNEGG-SPTALNQVVGWPPIRTYRMNSLVNQ 161

Query: 219 AKTARAEEDDVVCEEKKDQSKDSLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHSC 278
           AKTARAEEDDVVCEEKKDQS+D+LKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHSC
Sbjct: 162 AKTARAEEDDVVCEEKKDQSEDTLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHSC 221

Query: 279 YETLALMLEDMFFRSGGASIPNGQSGDKEQARKLSKLLDGSSEFVLTYEDREGDWMLVGD 338
           YET ALMLEDMFFRS GASI NGQSGDKEQARKLSKLLDGSSEFVLTYEDREGDWMLVGD
Sbjct: 222 YETFALMLEDMFFRSAGASISNGQSGDKEQARKLSKLLDGSSEFVLTYEDREGDWMLVGD 281

Query: 339 VPWGMFVCSVRRLRIMRTSEANGLAPRSQDKQVKQRSKPI 379
           VPWGMFV SVRRLRIMRTSEANGLAPRSQDK++ QRSKPI
Sbjct: 282 VPWGMFVSSVRRLRIMRTSEANGLAPRSQDKKMIQRSKPI 313

[Close]

BLAST of Clc06G07780 vs. NCBI nr
Match: XP_038906653.1 (auxin-responsive protein IAA13-like isoform X1 [Benincasa hispida])

HSP 1 Score: 481.9 bits (1239), Expect = 5.1e-132
Identity = 259/281 (92.17%), Postives = 263/281 (93.59%), Query Frame = 0


Query: 99  PIQSSPSPASSDLELGLGLALGPGGGGGGGKVNGGTWGERGRILTAQDFPVHGGSSSTSS 158
           PI SSPSPASSDLELGLGLAL     GGGGKVNGG WGERGRILTAQDFPVH GSSSTSS
Sbjct: 42  PIHSSPSPASSDLELGLGLAL-----GGGGKVNGGIWGERGRILTAQDFPVHCGSSSTSS 101

Query: 159 SSSSSSRFHGREANGSVAVSGTKRAADSAPNEGGSSPTALN-QVVGWPPIRTYRMNSLVN 218
           SSSSSSRFHGREANGS   SGTKRAADSAPNEGG SPTALN QVVGWPPIRTYRMNSLVN
Sbjct: 102 SSSSSSRFHGREANGS--FSGTKRAADSAPNEGG-SPTALNSQVVGWPPIRTYRMNSLVN 161

Query: 219 QAKTARAEEDDVVCEEKKDQSKDSLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHS 278
           QAKTARAEEDDVVCEEKKDQS+D+LKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHS
Sbjct: 162 QAKTARAEEDDVVCEEKKDQSEDTLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHS 221

Query: 279 CYETLALMLEDMFFRSGGASIPNGQSGDKEQARKLSKLLDGSSEFVLTYEDREGDWMLVG 338
           CYET ALMLEDMFFRS GASI NGQSGDKEQARKLSKLLDGSSEFVLTYEDREGDWMLVG
Sbjct: 222 CYETFALMLEDMFFRSAGASISNGQSGDKEQARKLSKLLDGSSEFVLTYEDREGDWMLVG 281

Query: 339 DVPWGMFVCSVRRLRIMRTSEANGLAPRSQDKQVKQRSKPI 379
           DVPWGMFV SVRRLRIMRTSEANGLAPRSQDK++ QRSKPI
Sbjct: 282 DVPWGMFVSSVRRLRIMRTSEANGLAPRSQDKKMIQRSKPI 314

[Close]

BLAST of Clc06G07780 vs. NCBI nr
Match: XP_011649126.1 (auxin-responsive protein IAA13 isoform X2 [Cucumis sativus] >KAE8651798.1 hypothetical protein Csa_006686 [Cucumis sativus])

HSP 1 Score: 478.4 bits (1230), Expect = 5.7e-131
Identity = 254/280 (90.71%), Postives = 261/280 (93.21%), Query Frame = 0


Query: 99  PIQSSPSPASSDLELGLGLALGPGGGGGGGKVNGGTWGERGRILTAQDFPVHGGSSSTSS 158
           PI SSPSPASSDLELGLGLAL    GGGGGKV G TWGERGRILTAQDFPVH GSSSTSS
Sbjct: 42  PILSSPSPASSDLELGLGLAL----GGGGGKVTGVTWGERGRILTAQDFPVHCGSSSTSS 101

Query: 159 SSSSSSRFHGREANGSVAVSGTKRAADSAPNEGGSSPTALNQVVGWPPIRTYRMNSLVNQ 218
           SSSSSSRFHGRE   SV+VSGTKRAADSAPNEGG SPTALNQVVGWPPIRTYRMNSLVNQ
Sbjct: 102 SSSSSSRFHGREVTCSVSVSGTKRAADSAPNEGG-SPTALNQVVGWPPIRTYRMNSLVNQ 161

Query: 219 AKTARAEEDDVVCEEKKDQSKDSLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHSC 278
           AKTARAEE+D  CEEKKDQSKD+LKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHSC
Sbjct: 162 AKTARAEEEDAGCEEKKDQSKDTLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHSC 221

Query: 279 YETLALMLEDMFFRSGGASIPNGQSGDKEQARKLSKLLDGSSEFVLTYEDREGDWMLVGD 338
           YETLALMLEDMFFRS GASI NG+SGDKEQA+K SKLLDGSSEFVLTYEDREGDWMLVGD
Sbjct: 222 YETLALMLEDMFFRSAGASITNGKSGDKEQAKKQSKLLDGSSEFVLTYEDREGDWMLVGD 281

Query: 339 VPWGMFVCSVRRLRIMRTSEANGLAPRSQDKQVKQRSKPI 379
           VPWGMFV SVRRLRIMRTSEANGLAPRSQD ++KQRSKPI
Sbjct: 282 VPWGMFVNSVRRLRIMRTSEANGLAPRSQDNKMKQRSKPI 316

[Close]

BLAST of Clc06G07780 vs. NCBI nr
Match: XP_008460695.1 (PREDICTED: auxin-responsive protein IAA13 [Cucumis melo])

HSP 1 Score: 475.3 bits (1222), Expect = 4.8e-130
Identity = 254/284 (89.44%), Postives = 261/284 (91.90%), Query Frame = 0


Query: 99  PIQSSPSPASSDLELGLGLALGPGGGGGGGKVNGGTWGERGRILTAQDFPVHGGSSST-- 158
           PI SS SPASSDLELGLGLAL    GGGGGKV G TWGERGRILTAQDFPVH GSSST  
Sbjct: 42  PIHSSTSPASSDLELGLGLAL----GGGGGKVTGATWGERGRILTAQDFPVHCGSSSTSS 101

Query: 159 --SSSSSSSSRFHGREANGSVAVSGTKRAADSAPNEGGSSPTALNQVVGWPPIRTYRMNS 218
             SSSSSSSSRFHGRE   SV+VSGTKRAADSAPNEGG SPTALNQVVGWPPIRTYRMNS
Sbjct: 102 TSSSSSSSSSRFHGREVTCSVSVSGTKRAADSAPNEGG-SPTALNQVVGWPPIRTYRMNS 161

Query: 219 LVNQAKTARAEEDDVVCEEKKDQSKDSLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLN 278
           LVNQAKTARAEE+D  CEEKKDQSKD+LKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLN
Sbjct: 162 LVNQAKTARAEEEDAGCEEKKDQSKDTLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLN 221

Query: 279 AHSCYETLALMLEDMFFRSGGASIPNGQSGDKEQARKLSKLLDGSSEFVLTYEDREGDWM 338
           AHSCYETLALMLEDMFFRS GASIPNG+SGDKEQA+K SKLLDGSSEFVLTYEDREGDWM
Sbjct: 222 AHSCYETLALMLEDMFFRSAGASIPNGKSGDKEQAKKQSKLLDGSSEFVLTYEDREGDWM 281

Query: 339 LVGDVPWGMFVCSVRRLRIMRTSEANGLAPRSQDKQVKQRSKPI 379
           LVGDVPWGMFV SVRRLRIMRTSEANGLAPRSQD ++KQRSKPI
Sbjct: 282 LVGDVPWGMFVSSVRRLRIMRTSEANGLAPRSQDNKMKQRSKPI 320

[Close]

BLAST of Clc06G07780 vs. NCBI nr
Match: XP_011649125.1 (auxin-responsive protein IAA13 isoform X1 [Cucumis sativus])

HSP 1 Score: 473.8 bits (1218), Expect = 1.4e-129
Identity = 254/281 (90.39%), Postives = 261/281 (92.88%), Query Frame = 0


Query: 99  PIQSSPSPASSDLELGLGLALGPGGGGGGGKVNGGTWGERGRILTAQDFPVHGGSSSTSS 158
           PI SSPSPASSDLELGLGLAL    GGGGGKV G TWGERGRILTAQDFPVH GSSSTSS
Sbjct: 42  PILSSPSPASSDLELGLGLAL----GGGGGKVTGVTWGERGRILTAQDFPVHCGSSSTSS 101

Query: 159 SSSSSSRFHGREANGSVAVSGTKRAADSAPNEGGSSPTALN-QVVGWPPIRTYRMNSLVN 218
           SSSSSSRFHGRE   SV+VSGTKRAADSAPNEGG SPTALN QVVGWPPIRTYRMNSLVN
Sbjct: 102 SSSSSSRFHGREVTCSVSVSGTKRAADSAPNEGG-SPTALNSQVVGWPPIRTYRMNSLVN 161

Query: 219 QAKTARAEEDDVVCEEKKDQSKDSLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHS 278
           QAKTARAEE+D  CEEKKDQSKD+LKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHS
Sbjct: 162 QAKTARAEEEDAGCEEKKDQSKDTLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHS 221

Query: 279 CYETLALMLEDMFFRSGGASIPNGQSGDKEQARKLSKLLDGSSEFVLTYEDREGDWMLVG 338
           CYETLALMLEDMFFRS GASI NG+SGDKEQA+K SKLLDGSSEFVLTYEDREGDWMLVG
Sbjct: 222 CYETLALMLEDMFFRSAGASITNGKSGDKEQAKKQSKLLDGSSEFVLTYEDREGDWMLVG 281

Query: 339 DVPWGMFVCSVRRLRIMRTSEANGLAPRSQDKQVKQRSKPI 379
           DVPWGMFV SVRRLRIMRTSEANGLAPRSQD ++KQRSKPI
Sbjct: 282 DVPWGMFVNSVRRLRIMRTSEANGLAPRSQDNKMKQRSKPI 317

[Close]

BLAST of Clc06G07780 vs. ExPASy Swiss-Prot
Match: Q38831 (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=2)

HSP 1 Score: 245.7 bits (626), Expect = 8.1e-64
Identity = 146/271 (53.87%), Postives = 177/271 (65.31%), Query Frame = 0


Query: 109 SDLELGLGLALGPGGGGGGGKV-NGGTWGERGRILTAQDFPVHGGSSSTSSSSSSSSRFH 168
           S+LELGLGL+LG G     GK   GG WGERGR+LTA+DFP                   
Sbjct: 12  SELELGLGLSLGGGTAAKIGKSGGGGAWGERGRLLTAKDFP------------------- 71

Query: 169 GREANGSVAVSGTKRAADSAPNEGGSSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEED 228
                 SV   G+KRAADSA + G S P + +QVVGWPPI ++RMNSLVN   T  A E+
Sbjct: 72  ------SV---GSKRAADSASHAGSSPPRSSSQVVGWPPIGSHRMNSLVNNQATKSAREE 131

Query: 229 DVVCEEKKDQSKDSLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHSCYETLALMLE 288
           +     KK    D  K+ T  V+GK  +GF+KVN+DGV IGRKVDLNAHS YE LA  LE
Sbjct: 132 EEA--GKKKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLE 191

Query: 289 DMFFRSGGASIPNGQSGDKEQARKLSKLLDGSSEFVLTYEDREGDWMLVGDVPWGMFVCS 348
           DMFFR+   ++     G   Q  K  +LLDGSSEFVLTYED+EGDWMLVGDVPW MF+ S
Sbjct: 192 DMFFRTNPGTV-----GLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINS 247

Query: 349 VRRLRIMRTSEANGLAPRSQDKQVKQRSKPI 379
           V+RLR+M+TSEANGLA R+Q+   +QR +P+
Sbjct: 252 VKRLRVMKTSEANGLAARNQEPNERQRKQPV 247

[Close]

BLAST of Clc06G07780 vs. ExPASy Swiss-Prot
Match: Q38830 (Auxin-responsive protein IAA12 OS=Arabidopsis thaliana OX=3702 GN=IAA12 PE=1 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.0e-58
Identity = 145/282 (51.42%), Postives = 180/282 (63.83%), Query Frame = 0


Query: 100 IQSSPSPASSDLELGLGLALGPGGGGGGGKVNGGTWGERGRILTAQDFPVHGGSSSTSSS 159
           +  S  PA S+LELGLGL+LG           GG W ERGRILTA+DFP           
Sbjct: 9   VGKSNLPAESELELGLGLSLG-----------GGAWKERGRILTAKDFP----------- 68

Query: 160 SSSSSRFHGREANGSVAVSGTKRAADSAPNEGGSSPTALNQVVGWPPIRTYRMNSLVNQ- 219
                         SV   G+KR+A+S+ ++G S P + +QVVGWPPI  +RMNSLVN  
Sbjct: 69  --------------SV---GSKRSAESSSHQGASPPRS-SQVVGWPPIGLHRMNSLVNNQ 128

Query: 220 -AKTARAEEDDVVCEEKKDQSKDSLKNKTCDVDGKGH-LGFVKVNVDGVVIGRKVDLNAH 279
             K ARAEE D    EKK    D LK+ +  V+ K   LGFVKVN+DGV IGRKVD+ AH
Sbjct: 129 AMKAARAEEGD---GEKKVVKNDELKDVSMKVNPKVQGLGFVKVNMDGVGIGRKVDMRAH 188

Query: 280 SCYETLALMLEDMFFRSGGASIPNGQSGDKEQARKLSKLLDGSSEFVLTYEDREGDWMLV 339
           S YE LA  LE+MFF   G +        +E+ + L +LLDGSS+FVLTYED+EGDWMLV
Sbjct: 189 SSYENLAQTLEEMFFGMTGTTC-------REKVKPL-RLLDGSSDFVLTYEDKEGDWMLV 239

Query: 340 GDVPWGMFVCSVRRLRIMRTSEANGLAPRSQDKQVKQRSKPI 379
           GDVPW MF+ SV+RLRIM TSEA+GLAPR Q+++ +QR+ P+
Sbjct: 249 GDVPWRMFINSVKRLRIMGTSEASGLAPRRQEQKDRQRNNPV 239

[Close]

BLAST of Clc06G07780 vs. ExPASy Swiss-Prot
Match: Q38829 (Auxin-responsive protein IAA11 OS=Arabidopsis thaliana OX=3702 GN=IAA11 PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.0e-45
Identity = 122/264 (46.21%), Postives = 155/264 (58.71%), Query Frame = 0


Query: 101 QSSPSPASSDLELGLGLALGPGGGGGGGKVNGGTWGERGRILTAQDFPVHGGSSSTSSSS 160
           + S SP  ++LELGL L+LG  G                     +D  V+   SS+SSSS
Sbjct: 24  EDSSSPIGNELELGLTLSLGRKG--------------------YRDCRVYADDSSSSSSS 83

Query: 161 SSSSRFHGREANGSVAVSGTKRAADSAPNEGGSSPTALNQVVGWPPIRTYRMNSLVNQAK 220
           SS SR        +  ++G KR ADS     G       QVVGWPPIRTYRMNS+VNQAK
Sbjct: 84  SSLSR--------ASVIAGIKRTADSMAATSG-------QVVGWPPIRTYRMNSMVNQAK 143

Query: 221 TARAEEDDVVCEEKKDQSK-DSLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHSCY 280
            +  E+ ++   +  ++++ DS K +        +  FVKV +DG+ IGRK+DLNAH CY
Sbjct: 144 ASATEDPNLEISQAVNKNRSDSTKMR--------NSMFVKVTMDGIPIGRKIDLNAHKCY 203

Query: 281 ETLALMLEDMFFRSGGASIPNGQSGDKEQARKLSKLLDGSSEFVLTYEDREGDWMLVGDV 340
           E+L+  LE+MF +    S      G  E   K+  L DGSS  VLTYED+EGDWMLVGDV
Sbjct: 204 ESLSNTLEEMFLKPKLGSRTLETDGHMETPVKI--LPDGSSGLVLTYEDKEGDWMLVGDV 242

Query: 341 PWGMFVCSVRRLRIMRTSEANGLA 364
           PWGMF+ SVRRLRIM+TSEA G A
Sbjct: 264 PWGMFIGSVRRLRIMKTSEATGKA 242

[Close]

BLAST of Clc06G07780 vs. ExPASy Swiss-Prot
Match: A2XB18 (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica OX=39946 GN=IAA10 PE=2 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 4.8e-40
Identity = 124/269 (46.10%), Postives = 152/269 (56.51%), Query Frame = 0


Query: 105 SPASSDLELGLGLALGPGGGGGGGKVNGGTWGERGRILTAQDFPVHGGSSSTSSSSSSSS 164
           S A  D EL LGL+L       G K          RILTA+D       S  SS SSSS 
Sbjct: 26  SSAGDDEELELGLSL-------GSKKQQQQQHAPCRILTARDLQPAAALSPDSSVSSSSP 85

Query: 165 RFHGREANGSVAVSGTKRA----ADSAPNEGGSS-PTALNQVVGWPPIRTYRMNSLVNQA 224
                    + A +G KRA    A ++P    S  P +   VVGWPPIR +RMNSL NQA
Sbjct: 86  --------AAAAAAGGKRAEGPTATTSPGTVASGHPHSSFGVVGWPPIRQFRMNSLFNQA 145

Query: 225 KTARAEEDDVVCEEKKDQSKDSLKNKTCDVDGKGHL-GFVKVNVDGVVIGRKVDLNAHSC 284
           K   +E D     +K   ++  ++    + + KG + G+VKVN+DG VIGRKVDLNAH  
Sbjct: 146 KENTSETD----TKKTATNESDVQKDKEEGEKKGRVAGWVKVNMDGEVIGRKVDLNAHRS 205

Query: 285 YETLALMLEDMFFRSGGASIPNGQSGDKEQARKLSKLLDGSSEFVLTYEDREGDWMLVGD 344
           Y+TLAL LE MF +       +  +          KLLD S+E+ LTYEDR+GDWMLVGD
Sbjct: 206 YKTLALALELMFTKPSIGLCASHNTNS-------LKLLDNSAEYQLTYEDRDGDWMLVGD 265

Query: 345 VPWGMFVCSVRRLRIMRTSEANGLAPRSQ 368
           VPW MFV SV+RLRIMRTS+ANGL  R Q
Sbjct: 266 VPWEMFVSSVKRLRIMRTSDANGLGQRYQ 268

[Close]

BLAST of Clc06G07780 vs. ExPASy Swiss-Prot
Match: Q0DWF2 (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA10 PE=2 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 4.8e-40
Identity = 124/269 (46.10%), Postives = 152/269 (56.51%), Query Frame = 0


Query: 105 SPASSDLELGLGLALGPGGGGGGGKVNGGTWGERGRILTAQDFPVHGGSSSTSSSSSSSS 164
           S A  D EL LGL+L       G K          RILTA+D       S  SS SSSS 
Sbjct: 26  SSAGDDEELELGLSL-------GSKKQQQQQHAPCRILTARDLQPAAALSPDSSVSSSSP 85

Query: 165 RFHGREANGSVAVSGTKRA----ADSAPNEGGSS-PTALNQVVGWPPIRTYRMNSLVNQA 224
                    + A +G KRA    A ++P    S  P +   VVGWPPIR +RMNSL NQA
Sbjct: 86  --------AAAAAAGGKRAEGPTATTSPGTVASGHPHSSFGVVGWPPIRQFRMNSLFNQA 145

Query: 225 KTARAEEDDVVCEEKKDQSKDSLKNKTCDVDGKGHL-GFVKVNVDGVVIGRKVDLNAHSC 284
           K   +E D     +K   ++  ++    + + KG + G+VKVN+DG VIGRKVDLNAH  
Sbjct: 146 KENTSETD----TKKTATNESDVQKDKEEGEKKGRVAGWVKVNMDGEVIGRKVDLNAHRS 205

Query: 285 YETLALMLEDMFFRSGGASIPNGQSGDKEQARKLSKLLDGSSEFVLTYEDREGDWMLVGD 344
           Y+TLAL LE MF +       +  +          KLLD S+E+ LTYEDR+GDWMLVGD
Sbjct: 206 YKTLALALELMFTKPSIGLCASHNTNS-------LKLLDNSAEYQLTYEDRDGDWMLVGD 265

Query: 345 VPWGMFVCSVRRLRIMRTSEANGLAPRSQ 368
           VPW MFV SV+RLRIMRTS+ANGL  R Q
Sbjct: 266 VPWEMFVSSVKRLRIMRTSDANGLGQRYQ 268

[Close]

BLAST of Clc06G07780 vs. ExPASy TrEMBL
Match: A0A1S3CCK6 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103499461 PE=3 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 2.3e-130
Identity = 254/284 (89.44%), Postives = 261/284 (91.90%), Query Frame = 0


Query: 99  PIQSSPSPASSDLELGLGLALGPGGGGGGGKVNGGTWGERGRILTAQDFPVHGGSSST-- 158
           PI SS SPASSDLELGLGLAL    GGGGGKV G TWGERGRILTAQDFPVH GSSST  
Sbjct: 42  PIHSSTSPASSDLELGLGLAL----GGGGGKVTGATWGERGRILTAQDFPVHCGSSSTSS 101

Query: 159 --SSSSSSSSRFHGREANGSVAVSGTKRAADSAPNEGGSSPTALNQVVGWPPIRTYRMNS 218
             SSSSSSSSRFHGRE   SV+VSGTKRAADSAPNEGG SPTALNQVVGWPPIRTYRMNS
Sbjct: 102 TSSSSSSSSSRFHGREVTCSVSVSGTKRAADSAPNEGG-SPTALNQVVGWPPIRTYRMNS 161

Query: 219 LVNQAKTARAEEDDVVCEEKKDQSKDSLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLN 278
           LVNQAKTARAEE+D  CEEKKDQSKD+LKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLN
Sbjct: 162 LVNQAKTARAEEEDAGCEEKKDQSKDTLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLN 221

Query: 279 AHSCYETLALMLEDMFFRSGGASIPNGQSGDKEQARKLSKLLDGSSEFVLTYEDREGDWM 338
           AHSCYETLALMLEDMFFRS GASIPNG+SGDKEQA+K SKLLDGSSEFVLTYEDREGDWM
Sbjct: 222 AHSCYETLALMLEDMFFRSAGASIPNGKSGDKEQAKKQSKLLDGSSEFVLTYEDREGDWM 281

Query: 339 LVGDVPWGMFVCSVRRLRIMRTSEANGLAPRSQDKQVKQRSKPI 379
           LVGDVPWGMFV SVRRLRIMRTSEANGLAPRSQD ++KQRSKPI
Sbjct: 282 LVGDVPWGMFVSSVRRLRIMRTSEANGLAPRSQDNKMKQRSKPI 320

[Close]

BLAST of Clc06G07780 vs. ExPASy TrEMBL
Match: A0A0A0LKJ5 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G170820 PE=3 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 6.8e-130
Identity = 254/281 (90.39%), Postives = 261/281 (92.88%), Query Frame = 0


Query: 99  PIQSSPSPASSDLELGLGLALGPGGGGGGGKVNGGTWGERGRILTAQDFPVHGGSSSTSS 158
           PI SSPSPASSDLELGLGLAL    GGGGGKV G TWGERGRILTAQDFPVH GSSSTSS
Sbjct: 42  PILSSPSPASSDLELGLGLAL----GGGGGKVTGVTWGERGRILTAQDFPVHCGSSSTSS 101

Query: 159 SSSSSSRFHGREANGSVAVSGTKRAADSAPNEGGSSPTALN-QVVGWPPIRTYRMNSLVN 218
           SSSSSSRFHGRE   SV+VSGTKRAADSAPNEGG SPTALN QVVGWPPIRTYRMNSLVN
Sbjct: 102 SSSSSSRFHGREVTCSVSVSGTKRAADSAPNEGG-SPTALNSQVVGWPPIRTYRMNSLVN 161

Query: 219 QAKTARAEEDDVVCEEKKDQSKDSLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHS 278
           QAKTARAEE+D  CEEKKDQSKD+LKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHS
Sbjct: 162 QAKTARAEEEDAGCEEKKDQSKDTLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHS 221

Query: 279 CYETLALMLEDMFFRSGGASIPNGQSGDKEQARKLSKLLDGSSEFVLTYEDREGDWMLVG 338
           CYETLALMLEDMFFRS GASI NG+SGDKEQA+K SKLLDGSSEFVLTYEDREGDWMLVG
Sbjct: 222 CYETLALMLEDMFFRSAGASITNGKSGDKEQAKKQSKLLDGSSEFVLTYEDREGDWMLVG 281

Query: 339 DVPWGMFVCSVRRLRIMRTSEANGLAPRSQDKQVKQRSKPI 379
           DVPWGMFV SVRRLRIMRTSEANGLAPRSQD ++KQRSKPI
Sbjct: 282 DVPWGMFVNSVRRLRIMRTSEANGLAPRSQDNKMKQRSKPI 317

[Close]

BLAST of Clc06G07780 vs. ExPASy TrEMBL
Match: A0A5D3CXS8 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00140 PE=3 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 4.7e-123
Identity = 242/272 (88.97%), Postives = 247/272 (90.81%), Query Frame = 0


Query: 99  PIQSSPSPASSDLELGLGLALGPGGGGGGGKVNGGTWGERGRILTAQDFPVHGGSSST-- 158
           PI SS SPASSDLELGLGLAL    GGGGGKV G TWGERGRILTAQDFPVH GSSST  
Sbjct: 42  PIHSSTSPASSDLELGLGLAL----GGGGGKVTGATWGERGRILTAQDFPVHCGSSSTSS 101

Query: 159 --SSSSSSSSRFHGREANGSVAVSGTKRAADSAPNEGGSSPTALNQVVGWPPIRTYRMNS 218
             SSSSSSSSRFHGRE   SV+VSGTKRAADSAPNEGG SPTALNQVVGWPPIRTYRMNS
Sbjct: 102 TSSSSSSSSSRFHGREVTCSVSVSGTKRAADSAPNEGG-SPTALNQVVGWPPIRTYRMNS 161

Query: 219 LVNQAKTARAEEDDVVCEEKKDQSKDSLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLN 278
           LVNQAKTARAEE+D  CEEKKDQSKD+LKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLN
Sbjct: 162 LVNQAKTARAEEEDAGCEEKKDQSKDTLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLN 221

Query: 279 AHSCYETLALMLEDMFFRSGGASIPNGQSGDKEQARKLSKLLDGSSEFVLTYEDREGDWM 338
           AHSCYETLALMLEDMFFRS GASIPNG+SGDKEQA+K SKLLDGSSEFVLTYEDREGDWM
Sbjct: 222 AHSCYETLALMLEDMFFRSAGASIPNGKSGDKEQAKKQSKLLDGSSEFVLTYEDREGDWM 281

Query: 339 LVGDVPWGMFVCSVRRLRIMRTSEANGLAPRS 367
           LVGDVPWGMFV SVRRLRIMRTSEANGL   S
Sbjct: 282 LVGDVPWGMFVSSVRRLRIMRTSEANGLGGSS 308

[Close]

BLAST of Clc06G07780 vs. ExPASy TrEMBL
Match: A0A6J1L3Y4 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111498932 PE=3 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 4.9e-112
Identity = 235/307 (76.55%), Postives = 250/307 (81.43%), Query Frame = 0


Query: 74  GLFLGPPLTTPIPPQSTFFRK--ILWTPIQSSPSPASSDLELGLGLALGPGGGGGGGKVN 133
           G   G  +  P  P+   F K  +   PI+ SP PASS LELGLGLA+     GG GKV+
Sbjct: 15  GSVSGSAINDPNEPRMKIFEKDFVGKIPIEPSPCPASSGLELGLGLAV-----GGCGKVS 74

Query: 134 GGTWGERGRILTAQDFPVHGGSSSTSSSSSSSSRFHGREANGSVAVSGTKRAADSAPNEG 193
           GGTWGERGRILTA+DFPV GGSS   SS SSSS FHGRE NGSVAVSGTKRAADSAPN+G
Sbjct: 75  GGTWGERGRILTARDFPVLGGSS--VSSCSSSSCFHGREGNGSVAVSGTKRAADSAPNDG 134

Query: 194 GSSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDDVVCEEKKDQSKDSLKNKTCDVDG 253
           G SPTALNQVVGWPPIRTYRMNSLVNQAKTARAEED        +QSKD   NK CDVDG
Sbjct: 135 G-SPTALNQVVGWPPIRTYRMNSLVNQAKTARAEED--------EQSKD---NKACDVDG 194

Query: 254 KGHLGFVKVNVDGVVIGRKVDLNAHSCYETLALMLEDMFFRSGGASIPNGQSGDKEQARK 313
           KGHLGFVKVNVDGVVIGRKVD+NAHSCYETLALMLEDMFF+S      NG+SGDKEQ +K
Sbjct: 195 KGHLGFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKS------NGKSGDKEQGQK 254

Query: 314 LSKLLDGSSEFVLTYEDREGDWMLVGDVPWGMFVCSVRRLRIMRTSEANGLAPRSQDKQV 373
           LSKLLDGSSEFVLTYEDREGDWMLVGDVPW MF+ SVRRLRIMRTSEANGLAPRSQDK+ 
Sbjct: 255 LSKLLDGSSEFVLTYEDREGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKA 296

Query: 374 KQRSKPI 379
           KQRSKPI
Sbjct: 315 KQRSKPI 296

[Close]

BLAST of Clc06G07780 vs. ExPASy TrEMBL
Match: A0A6J1H4Z9 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111460198 PE=3 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 1.4e-111
Identity = 229/280 (81.79%), Postives = 243/280 (86.79%), Query Frame = 0


Query: 99  PIQSSPSPASSDLELGLGLALGPGGGGGGGKVNGGTWGERGRILTAQDFPVHGGSSSTSS 158
           PI+ SP PASS LELGLGLA+     GG GKV+GGTWGERGRILTA+DFPV GGSS   S
Sbjct: 42  PIEPSPCPASSGLELGLGLAV-----GGCGKVSGGTWGERGRILTARDFPVLGGSS--VS 101

Query: 159 SSSSSSRFHGREANGSVAVSGTKRAADSAPNEGGSSPTALNQVVGWPPIRTYRMNSLVNQ 218
           S SSSS FHGRE+NGSVAVSGTKRAADSAPN+GG SPTALNQVVGWPPIRTYRMNSLVNQ
Sbjct: 102 SCSSSSCFHGRESNGSVAVSGTKRAADSAPNDGG-SPTALNQVVGWPPIRTYRMNSLVNQ 161

Query: 219 AKTARAEEDDVVCEEKKDQSKDSLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHSC 278
           AKTARAEED        +QSKD   NKTCDVDGKGHLGFVKVNVDGVVIGRKVD+NAHSC
Sbjct: 162 AKTARAEED--------EQSKD---NKTCDVDGKGHLGFVKVNVDGVVIGRKVDINAHSC 221

Query: 279 YETLALMLEDMFFRSGGASIPNGQSGDKEQARKLSKLLDGSSEFVLTYEDREGDWMLVGD 338
           YETLALMLEDMFF+S      +G+SGDKEQ +KLSKLLDGSSEFVLTYEDREGDWMLVGD
Sbjct: 222 YETLALMLEDMFFKS------DGKSGDKEQGQKLSKLLDGSSEFVLTYEDREGDWMLVGD 281

Query: 339 VPWGMFVCSVRRLRIMRTSEANGLAPRSQDKQVKQRSKPI 379
           VPW MF+ SVRRLRIMRTSEANGLAPRSQDK+ KQRSKPI
Sbjct: 282 VPWRMFLSSVRRLRIMRTSEANGLAPRSQDKKAKQRSKPI 296

[Close]

BLAST of Clc06G07780 vs. TAIR 10
Match: AT2G33310.2 (auxin-induced protein 13 )

HSP 1 Score: 245.7 bits (626), Expect = 5.8e-65
Identity = 146/271 (53.87%), Postives = 177/271 (65.31%), Query Frame = 0


Query: 109 SDLELGLGLALGPGGGGGGGKV-NGGTWGERGRILTAQDFPVHGGSSSTSSSSSSSSRFH 168
           S+LELGLGL+LG G     GK   GG WGERGR+LTA+DFP                   
Sbjct: 12  SELELGLGLSLGGGTAAKIGKSGGGGAWGERGRLLTAKDFP------------------- 71

Query: 169 GREANGSVAVSGTKRAADSAPNEGGSSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEED 228
                 SV   G+KRAADSA + G S P + +QVVGWPPI ++RMNSLVN   T  A E+
Sbjct: 72  ------SV---GSKRAADSASHAGSSPPRSSSQVVGWPPIGSHRMNSLVNNQATKSAREE 131

Query: 229 DVVCEEKKDQSKDSLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHSCYETLALMLE 288
           +     KK    D  K+ T  V+GK  +GF+KVN+DGV IGRKVDLNAHS YE LA  LE
Sbjct: 132 EEA--GKKKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLE 191

Query: 289 DMFFRSGGASIPNGQSGDKEQARKLSKLLDGSSEFVLTYEDREGDWMLVGDVPWGMFVCS 348
           DMFFR+   ++     G   Q  K  +LLDGSSEFVLTYED+EGDWMLVGDVPW MF+ S
Sbjct: 192 DMFFRTNPGTV-----GLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINS 247

Query: 349 VRRLRIMRTSEANGLAPRSQDKQVKQRSKPI 379
           V+RLR+M+TSEANGLA R+Q+   +QR +P+
Sbjct: 252 VKRLRVMKTSEANGLAARNQEPNERQRKQPV 247

[Close]

BLAST of Clc06G07780 vs. TAIR 10
Match: AT2G33310.1 (auxin-induced protein 13 )

HSP 1 Score: 243.0 bits (619), Expect = 3.7e-64
Identity = 147/271 (54.24%), Postives = 177/271 (65.31%), Query Frame = 0


Query: 109 SDLELGLGLALGPGGGGGGGKV-NGGTWGERGRILTAQDFPVHGGSSSTSSSSSSSSRFH 168
           S+LELGLGL+LG G     GK   GG WGERGR+LTA+DFP                   
Sbjct: 12  SELELGLGLSLGGGTAAKIGKSGGGGAWGERGRLLTAKDFP------------------- 71

Query: 169 GREANGSVAVSGTKRAADSAPNEGGSSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEED 228
                 SV   G+KRAADSA +  GSSP   +QVVGWPPI ++RMNSLVN   T  A E+
Sbjct: 72  ------SV---GSKRAADSA-SHAGSSPPRSSQVVGWPPIGSHRMNSLVNNQATKSAREE 131

Query: 229 DVVCEEKKDQSKDSLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHSCYETLALMLE 288
           +     KK    D  K+ T  V+GK  +GF+KVN+DGV IGRKVDLNAHS YE LA  LE
Sbjct: 132 EEA--GKKKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLE 191

Query: 289 DMFFRSGGASIPNGQSGDKEQARKLSKLLDGSSEFVLTYEDREGDWMLVGDVPWGMFVCS 348
           DMFFR+   ++     G   Q  K  +LLDGSSEFVLTYED+EGDWMLVGDVPW MF+ S
Sbjct: 192 DMFFRTNPGTV-----GLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINS 246

Query: 349 VRRLRIMRTSEANGLAPRSQDKQVKQRSKPI 379
           V+RLR+M+TSEANGLA R+Q+   +QR +P+
Sbjct: 252 VKRLRVMKTSEANGLAARNQEPNERQRKQPV 246

[Close]

BLAST of Clc06G07780 vs. TAIR 10
Match: AT2G33310.3 (auxin-induced protein 13 )

HSP 1 Score: 243.0 bits (619), Expect = 3.7e-64
Identity = 147/271 (54.24%), Postives = 177/271 (65.31%), Query Frame = 0


Query: 109 SDLELGLGLALGPGGGGGGGKV-NGGTWGERGRILTAQDFPVHGGSSSTSSSSSSSSRFH 168
           S+LELGLGL+LG G     GK   GG WGERGR+LTA+DFP                   
Sbjct: 12  SELELGLGLSLGGGTAAKIGKSGGGGAWGERGRLLTAKDFP------------------- 71

Query: 169 GREANGSVAVSGTKRAADSAPNEGGSSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEED 228
                 SV   G+KRAADSA +  GSSP   +QVVGWPPI ++RMNSLVN   T  A E+
Sbjct: 72  ------SV---GSKRAADSA-SHAGSSPPRSSQVVGWPPIGSHRMNSLVNNQATKSAREE 131

Query: 229 DVVCEEKKDQSKDSLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHSCYETLALMLE 288
           +     KK    D  K+ T  V+GK  +GF+KVN+DGV IGRKVDLNAHS YE LA  LE
Sbjct: 132 EEA--GKKKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLE 191

Query: 289 DMFFRSGGASIPNGQSGDKEQARKLSKLLDGSSEFVLTYEDREGDWMLVGDVPWGMFVCS 348
           DMFFR+   ++     G   Q  K  +LLDGSSEFVLTYED+EGDWMLVGDVPW MF+ S
Sbjct: 192 DMFFRTNPGTV-----GLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINS 246

Query: 349 VRRLRIMRTSEANGLAPRSQDKQVKQRSKPI 379
           V+RLR+M+TSEANGLA R+Q+   +QR +P+
Sbjct: 252 VKRLRVMKTSEANGLAARNQEPNERQRKQPV 246

[Close]

BLAST of Clc06G07780 vs. TAIR 10
Match: AT1G04550.2 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 227.3 bits (578), Expect = 2.1e-59
Identity = 145/282 (51.42%), Postives = 180/282 (63.83%), Query Frame = 0


Query: 100 IQSSPSPASSDLELGLGLALGPGGGGGGGKVNGGTWGERGRILTAQDFPVHGGSSSTSSS 159
           +  S  PA S+LELGLGL+LG           GG W ERGRILTA+DFP           
Sbjct: 9   VGKSNLPAESELELGLGLSLG-----------GGAWKERGRILTAKDFP----------- 68

Query: 160 SSSSSRFHGREANGSVAVSGTKRAADSAPNEGGSSPTALNQVVGWPPIRTYRMNSLVNQ- 219
                         SV   G+KR+A+S+ ++G S P + +QVVGWPPI  +RMNSLVN  
Sbjct: 69  --------------SV---GSKRSAESSSHQGASPPRS-SQVVGWPPIGLHRMNSLVNNQ 128

Query: 220 -AKTARAEEDDVVCEEKKDQSKDSLKNKTCDVDGKGH-LGFVKVNVDGVVIGRKVDLNAH 279
             K ARAEE D    EKK    D LK+ +  V+ K   LGFVKVN+DGV IGRKVD+ AH
Sbjct: 129 AMKAARAEEGD---GEKKVVKNDELKDVSMKVNPKVQGLGFVKVNMDGVGIGRKVDMRAH 188

Query: 280 SCYETLALMLEDMFFRSGGASIPNGQSGDKEQARKLSKLLDGSSEFVLTYEDREGDWMLV 339
           S YE LA  LE+MFF   G +        +E+ + L +LLDGSS+FVLTYED+EGDWMLV
Sbjct: 189 SSYENLAQTLEEMFFGMTGTTC-------REKVKPL-RLLDGSSDFVLTYEDKEGDWMLV 239

Query: 340 GDVPWGMFVCSVRRLRIMRTSEANGLAPRSQDKQVKQRSKPI 379
           GDVPW MF+ SV+RLRIM TSEA+GLAPR Q+++ +QR+ P+
Sbjct: 249 GDVPWRMFINSVKRLRIMGTSEASGLAPRRQEQKDRQRNNPV 239

[Close]

BLAST of Clc06G07780 vs. TAIR 10
Match: AT4G28640.1 (indole-3-acetic acid inducible 11 )

HSP 1 Score: 183.3 bits (464), Expect = 3.5e-46
Identity = 122/264 (46.21%), Postives = 155/264 (58.71%), Query Frame = 0


Query: 101 QSSPSPASSDLELGLGLALGPGGGGGGGKVNGGTWGERGRILTAQDFPVHGGSSSTSSSS 160
           + S SP  ++LELGL L+LG  G                     +D  V+   SS+SSSS
Sbjct: 24  EDSSSPIGNELELGLTLSLGRKG--------------------YRDCRVYADDSSSSSSS 83

Query: 161 SSSSRFHGREANGSVAVSGTKRAADSAPNEGGSSPTALNQVVGWPPIRTYRMNSLVNQAK 220
           SS SR        +  ++G KR ADS     G       QVVGWPPIRTYRMNS+VNQAK
Sbjct: 84  SSLSR--------ASVIAGIKRTADSMAATSG-------QVVGWPPIRTYRMNSMVNQAK 143

Query: 221 TARAEEDDVVCEEKKDQSK-DSLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHSCY 280
            +  E+ ++   +  ++++ DS K +        +  FVKV +DG+ IGRK+DLNAH CY
Sbjct: 144 ASATEDPNLEISQAVNKNRSDSTKMR--------NSMFVKVTMDGIPIGRKIDLNAHKCY 203

Query: 281 ETLALMLEDMFFRSGGASIPNGQSGDKEQARKLSKLLDGSSEFVLTYEDREGDWMLVGDV 340
           E+L+  LE+MF +    S      G  E   K+  L DGSS  VLTYED+EGDWMLVGDV
Sbjct: 204 ESLSNTLEEMFLKPKLGSRTLETDGHMETPVKI--LPDGSSGLVLTYEDKEGDWMLVGDV 242

Query: 341 PWGMFVCSVRRLRIMRTSEANGLA 364
           PWGMF+ SVRRLRIM+TSEA G A
Sbjct: 264 PWGMFIGSVRRLRIMKTSEATGKA 242

The following BLAST results are available for this feature:

BLAST of Clc06G07780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906654.1	2.1e-133	92.50	auxin-responsive protein IAA13-like isoform X2 [Benincasa hispida]	[more]
XP_038906653.1	5.1e-132	92.17	auxin-responsive protein IAA13-like isoform X1 [Benincasa hispida]	[more]
XP_011649126.1	5.7e-131	90.71	auxin-responsive protein IAA13 isoform X2 [Cucumis sativus] >KAE8651798.1 hypoth...	[more]
XP_008460695.1	4.8e-130	89.44	PREDICTED: auxin-responsive protein IAA13 [Cucumis melo]	[more]
XP_011649125.1	1.4e-129	90.39	auxin-responsive protein IAA13 isoform X1 [Cucumis sativus]	[more]

BLAST of Clc06G07780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38831	8.1e-64	53.87	Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=...	[more]
Q38830	3.0e-58	51.42	Auxin-responsive protein IAA12 OS=Arabidopsis thaliana OX=3702 GN=IAA12 PE=1 SV=...	[more]
Q38829	5.0e-45	46.21	Auxin-responsive protein IAA11 OS=Arabidopsis thaliana OX=3702 GN=IAA11 PE=1 SV=...	[more]
A2XB18	4.8e-40	46.10	Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica OX=39946 GN=IAA10 P...	[more]
Q0DWF2	4.8e-40	46.10	Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA10...	[more]

BLAST of Clc06G07780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CCK6	2.3e-130	89.44	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103499461 PE=3 SV=1	[more]
A0A0A0LKJ5	6.8e-130	90.39	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G170820 PE=3 SV=1	[more]
A0A5D3CXS8	4.7e-123	88.97	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A6J1L3Y4	4.9e-112	76.55	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111498932 PE=3 SV=1	[more]
A0A6J1H4Z9	1.4e-111	81.79	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111460198 PE=3 SV=1	[more]

BLAST of Clc06G07780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33310.2	5.8e-65	53.87	auxin-induced protein 13	[more]
AT2G33310.1	3.7e-64	54.24	auxin-induced protein 13	[more]
AT2G33310.3	3.7e-64	54.24	auxin-induced protein 13	[more]
AT1G04550.2	2.1e-59	51.42	AUX/IAA transcriptional regulator family protein	[more]
AT4G28640.1	3.5e-46	46.21	indole-3-acetic acid inducible 11	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 173..365 e-value: 3.0E-62 score: 210.6
None	No IPR available	GENE3D	3.10.20.90		coord: 251..368 e-value: 2.2E-36 score: 126.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..243
None	No IPR available	PANTHER	PTHR31734:SF187	AUXIN-RESPONSIVE PROTEIN	coord: 101..369
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 257..354
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 101..369
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 255..358 score: 24.036848

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G07780.2	Clc06G07780.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding