Clc06G07370 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAAAGAGGTAATAAAAATGTATGTGAAATGGGTAATGGTGTTTGCAATTGCAGTGGTGCTTCTCACCGCTGAGGCTCACCAGCCAACGCTTACTCAAAATGATCCTTATTATCCTAAGGAAATGGAGTCGTCCGTGGCTGAAAAAAAGAAGTTCGTGGGCCAACGCGGTGATCACAGTACCGATCCTAAGCACGGAAAAGGATGCCATAAAAACGCATATGACAGGTGCAAGCCACCCATGTCCGACTGAATGGCTCTCCCTCTGTGTTTAGATTGGCCACTCTGTTGGGGACAATATATATGCCTTATCTACTAAATAAAACTATTCCAAAAGCCTATGTATCGGCTGCTCCCACCGATATGGTCTCTTAAATATTATTGTAATGTAATAATGCTAGTGTTCTACTTGGTGTCTTTTTCTCTGTAACATTAATGTTTGTATTTGCATCTTCATGTATTTTCACCTTATTTTTGTTTCTAGCAATTTTAGCAGGATTTCCAGCTTAACTCTCAGCTTTTTATTTTCCTTTCGGCTTAAGAATGTGATATGGGTAAAACTAGACTTCAAAAAGATACACTAAAGACTATCAAAATCTATTAGTAATAGATAGACTCTTA AAAAAAAAAAAAGAGGTAATAAAAATGTATGTGAAATGGGTAATGGTGTTTGCAATTGCAGTGGTGCTTCTCACCGCTGAGGCTCACCAGCCAACGCTTACTCAAAATGATCCTTATTATCCTAAGGAAATGGAGTCGTCCGTGGCTGAAAAAAAGAAGTTCGTGGGCCAACGCGGTGATCACAGTACCGATCCTAAGCACGGAAAAGGATGCCATAAAAACGCATATGACAGGTGCAAGCCACCCATGTCCGACTGAATGGCTCTCCCTCTGTGTTTAGATTGGCCACTCTGTTGGGGACAATATATATGCCTTATCTACTAAATAAAACTATTCCAAAAGCCTATGTATCGGCTGCTCCCACCGATATGGTCTCTTAAATATTATTGTAATGTAATAATGCTAGTGTTCTACTTGGTGTCTTTTTCTCTGTAACATTAATGTTTGTATTTGCATCTTCATGTATTTTCACCTTATTTTTGTTTCTAGCAATTTTAGCAGGATTTCCAGCTTAACTCTCAGCTTTTTATTTTCCTTTCGGCTTAAGAATGTGATATGGGTAAAACTAGACTTCAAAAAGATACACTAAAGACTATCAAAATCTATTAGTAATAGATAGACTCTTA ATGTATGTGAAATGGGTAATGGTGTTTGCAATTGCAGTGGTGCTTCTCACCGCTGAGGCTCACCAGCCAACGCTTACTCAAAATGATCCTTATTATCCTAAGGAAATGGAGTCGTCCGTGGCTGAAAAAAAGAAGTTCGTGGGCCAACGCGGTGATCACAGTACCGATCCTAAGCACGGAAAAGGATGCCATAAAAACGCATATGACAGGTGCAAGCCACCCATGTCCGACTGA MYVKWVMVFAIAVVLLTAEAHQPTLTQNDPYYPKEMESSVAEKKKFVGQRGDHSTDPKHGKGCHKNAYDRCKPPMSD Homology
BLAST of Clc06G07370 vs. NCBI nr
Match: KAA0065660.1 (hypothetical protein E6C27_scaffold90G001190 [Cucumis melo var. makuwa] >TYK01422.1 hypothetical protein E5676_scaffold772G00050 [Cucumis melo var. makuwa]) HSP 1 Score: 69.7 bits (169), Expect = 1.2e-08 Identity = 42/83 (50.60%), Postives = 52/83 (62.65%), Query Frame = 0
BLAST of Clc06G07370 vs. NCBI nr
Match: KGN61603.1 (hypothetical protein Csa_006268 [Cucumis sativus]) HSP 1 Score: 62.4 bits (150), Expect = 2.0e-06 Identity = 38/76 (50.00%), Postives = 43/76 (56.58%), Query Frame = 0
BLAST of Clc06G07370 vs. NCBI nr
Match: KAA0065661.1 (hypothetical protein E6C27_scaffold90G001210 [Cucumis melo var. makuwa] >TYK01420.1 hypothetical protein E5676_scaffold772G00020 [Cucumis melo var. makuwa]) HSP 1 Score: 58.9 bits (141), Expect = 2.2e-05 Identity = 39/77 (50.65%), Postives = 43/77 (55.84%), Query Frame = 0
BLAST of Clc06G07370 vs. ExPASy TrEMBL
Match: A0A5A7VEN6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold772G00050 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 6.0e-09 Identity = 42/83 (50.60%), Postives = 52/83 (62.65%), Query Frame = 0
BLAST of Clc06G07370 vs. ExPASy TrEMBL
Match: A0A0A0LII8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G176170 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 9.6e-07 Identity = 38/76 (50.00%), Postives = 43/76 (56.58%), Query Frame = 0
BLAST of Clc06G07370 vs. ExPASy TrEMBL
Match: A0A5A7VIV6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold772G00020 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.1e-05 Identity = 39/77 (50.65%), Postives = 43/77 (55.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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