Clc06G06530 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G06530
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Transcription repressor
Location	ClcChr06: 6851060 .. 6852036 (-)
RNA-Seq Expression	Clc06G06530
Synteny	Clc06G06530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAGACTAAGACCACTCATTGTTTGTTTAAATCTCCCTCTCGCATTATTGCAACAACTAAAGTCATCTAAAAAAAATGTCCAATCTGAAATTCCTCAACAACCTTCATTTCTTCTTCTCCAAACTCAAATTCTCAACGCCGGCCGCCGTCATCGCCGCCCACACCCCACCCTCCGACTGCTACTTCACCTCCAACCCCATTTCCTCCACCGTCGATGATGACGACGGCTTCTTTTCCACCTCCTCCGACTCCGACGACTCCATCTCCGACGACCTTGCCGCCATCCTCGCCTCCCGCCGCTTCTTCTTCTCCTCTCCCGGCCGCTCCAACTCCATTTTCGAGTACTCCTCCGCCTCCCGCCGCCAAGCCCACGACGTCGTCGTTTCAGATGGTCTTAAAGTCCCCAAATATTCGATGGACCCTTACGCCGACTTCCGGCGGTCGATGCAAGAGATGGTGGAAGCTCGAGAATTGGAGGATGTAAGAAGCGATTCCGAGTTTTTGCGAGAGCTTTTGTCTTGCTATCTCCGTTTGAATCCCAAGGATACCCATAAATTCATTGTTAGAGCTTTTGCCGATCTTGTTCTCAGCATGTTGGCTTCCTCCTCCCCGGCTCCATCACCGGCTGCCAAAGCTCGCCGGAAAGTTGTTATGTTTGGGTAATATGTGTGCTCTGTTTAATTCAAAAGAAAGAGTTAAAAAAAGACTAATTGTTTGTTTCTTAAAAAATTATTTATCAAGATCGGCACGATATGACTCTCACAATAACTATGAAATGAATCTATATAATATAATAAAATGATTGATATAAATTTGAAGTTTCTATTTATTTGAAGTAAAATAATTCAAGGATAAAACTGAATAATATATATTTCGTTTGTTTTTCATGCAATTTTTTGTTTGAGCGAAAAAGATAAAATTTAAATAAAGTTGTGGTTTTTTTTTCTCTCTCTCTGGAGTAATAATAATTACTGAA

mRNA sequence

CTAAGACTAAGACCACTCATTGTTTGTTTAAATCTCCCTCTCGCATTATTGCAACAACTAAAGTCATCTAAAAAAAATGTCCAATCTGAAATTCCTCAACAACCTTCATTTCTTCTTCTCCAAACTCAAATTCTCAACGCCGGCCGCCGTCATCGCCGCCCACACCCCACCCTCCGACTGCTACTTCACCTCCAACCCCATTTCCTCCACCGTCGATGATGACGACGGCTTCTTTTCCACCTCCTCCGACTCCGACGACTCCATCTCCGACGACCTTGCCGCCATCCTCGCCTCCCGCCGCTTCTTCTTCTCCTCTCCCGGCCGCTCCAACTCCATTTTCGAGTACTCCTCCGCCTCCCGCCGCCAAGCCCACGACGTCGTCGTTTCAGATGGTCTTAAAGTCCCCAAATATTCGATGGACCCTTACGCCGACTTCCGGCGGTCGATGCAAGAGATGGTGGAAGCTCGAGAATTGGAGGATGTAAGAAGCGATTCCGAGTTTTTGCGAGAGCTTTTGTCTTGCTATCTCCGTTTGAATCCCAAGGATACCCATAAATTCATTGTTAGAGCTTTTGCCGATCTTGTTCTCAGCATGTTGGCTTCCTCCTCCCCGGCTCCATCACCGGCTGCCAAAGCTCGCCGGAAAGTTGTTATGTTTGGGTAATATGTGTGCTCTGTTTAATTCAAAAGAAAGAGTTAAAAAAAGACTAATTGTTTGTTTCTTAAAAAATTATTTATCAAGATCGGCACGATATGACTCTCACAATAACTATGAAATGAATCTATATAATATAATAAAATGATTGATATAAATTTGAAGTTTCTATTTATTTGAAGTAAAATAATTCAAGGATAAAACTGAATAATATATATTTCGTTTGTTTTTCATGCAATTTTTTGTTTGAGCGAAAAAGATAAAATTTAAATAAAGTTGTGGTTTTTTTTTCTCTCTCTCTGGAGTAATAATAATTACTGAA

Coding sequence (CDS)

ATGTCCAATCTGAAATTCCTCAACAACCTTCATTTCTTCTTCTCCAAACTCAAATTCTCAACGCCGGCCGCCGTCATCGCCGCCCACACCCCACCCTCCGACTGCTACTTCACCTCCAACCCCATTTCCTCCACCGTCGATGATGACGACGGCTTCTTTTCCACCTCCTCCGACTCCGACGACTCCATCTCCGACGACCTTGCCGCCATCCTCGCCTCCCGCCGCTTCTTCTTCTCCTCTCCCGGCCGCTCCAACTCCATTTTCGAGTACTCCTCCGCCTCCCGCCGCCAAGCCCACGACGTCGTCGTTTCAGATGGTCTTAAAGTCCCCAAATATTCGATGGACCCTTACGCCGACTTCCGGCGGTCGATGCAAGAGATGGTGGAAGCTCGAGAATTGGAGGATGTAAGAAGCGATTCCGAGTTTTTGCGAGAGCTTTTGTCTTGCTATCTCCGTTTGAATCCCAAGGATACCCATAAATTCATTGTTAGAGCTTTTGCCGATCTTGTTCTCAGCATGTTGGCTTCCTCCTCCCCGGCTCCATCACCGGCTGCCAAAGCTCGCCGGAAAGTTGTTATGTTTGGGTAA

Protein sequence

MSNLKFLNNLHFFFSKLKFSTPAAVIAAHTPPSDCYFTSNPISSTVDDDDGFFSTSSDSDDSISDDLAAILASRRFFFSSPGRSNSIFEYSSASRRQAHDVVVSDGLKVPKYSMDPYADFRRSMQEMVEARELEDVRSDSEFLRELLSCYLRLNPKDTHKFIVRAFADLVLSMLASSSPAPSPAAKARRKVVMFG

Homology

[Close]

BLAST of Clc06G06530 vs. NCBI nr
Match: XP_038876316.1 (LOW QUALITY PROTEIN: transcription repressor OFP12-like [Benincasa hispida])

HSP 1 Score: 309.3 bits (791), Expect = 2.4e-80
Identity = 166/194 (85.57%), Postives = 176/194 (90.72%), Query Frame = 0


Query: 1   MSNLKFLNNLHFFFSKLKFSTPAAVIAAHTPPSDCYFTSNPISSTV-DDDDGFFSTSSDS 60
           MSNLKFLNN+H FFSKLKFS P AVIAAHTP SDCYFTSNPISST  DDDD FFSTSSD+
Sbjct: 1   MSNLKFLNNVHXFFSKLKFSPPPAVIAAHTPTSDCYFTSNPISSTADDDDDDFFSTSSDA 60

Query: 61  DDSISDDLAAILASRRFFFSSPGRSNSIFEYSSASRRQAHDVVVSDGLKVPKYSMDPYAD 120
            DSISDDLAAILASRRFFFSSPGRSNSIFEYSSASRR+  D +VS+GL+VPKYSMDPYAD
Sbjct: 61  XDSISDDLAAILASRRFFFSSPGRSNSIFEYSSASRRRPDDTIVSEGLEVPKYSMDPYAD 120

Query: 121 FRRSMQEMVEARELEDVRSDSEFLRELLSCYLRLNPKDTHKFIVRAFADLVLSMLASSSP 180
           FRRSMQEMVEARELEDVRSDSEFLRELLSCYLRLNPKDTHKFIV+AF+DLVL +LA    
Sbjct: 121 FRRSMQEMVEARELEDVRSDSEFLRELLSCYLRLNPKDTHKFIVKAFSDLVLCLLA---- 180

Query: 181 APSPAAKARRKVVM 194
           AP+PA K RRKVVM
Sbjct: 181 APAPAFKTRRKVVM 190

[Close]

BLAST of Clc06G06530 vs. NCBI nr
Match: XP_011659018.1 (transcription repressor OFP12 [Cucumis sativus] >KGN44243.1 hypothetical protein Csa_016043 [Cucumis sativus])

HSP 1 Score: 308.9 bits (790), Expect = 3.1e-80
Identity = 165/194 (85.05%), Postives = 179/194 (92.27%), Query Frame = 0


Query: 1   MSNLKFLNNLHFFFSKLKFSTPAAVIAAHTPPSDCYFTSNPISSTVDDD-DGFFSTSSDS 60
           MSNLKFLNNL+ FFSKLKFS P  VIA+HTPPSDCYFTSNPISST  DD D FFSTSSD+
Sbjct: 1   MSNLKFLNNLYSFFSKLKFSPPPPVIASHTPPSDCYFTSNPISSTTADDCDDFFSTSSDA 60

Query: 61  DDSISDDLAAILASRRFFFSSPGRSNSIFEYSSASRR-QAHDVVVSDGLKVPKYSMDPYA 120
           DDSISDDLAA+LASRRFFFSSPGRSNSIFEYSS SRR Q HDV+VS+G ++ KYSMDPYA
Sbjct: 61  DDSISDDLAALLASRRFFFSSPGRSNSIFEYSSCSRRQQPHDVLVSEGHRIRKYSMDPYA 120

Query: 121 DFRRSMQEMVEARELEDVRSDSEFLRELLSCYLRLNPKDTHKFIVRAFADLVLSMLASSS 180
           DFRRSMQEMVEARELEDVRSDSEFLRELLSCYLRLNPK+THKFIV+AF+DLVLS+LASSS
Sbjct: 121 DFRRSMQEMVEARELEDVRSDSEFLRELLSCYLRLNPKNTHKFIVKAFSDLVLSLLASSS 180

Query: 181 PAPSPAAKARRKVV 193
           P P+PA+ ARRKVV
Sbjct: 181 PTPAPASIARRKVV 194

[Close]

BLAST of Clc06G06530 vs. NCBI nr
Match: XP_023006330.1 (transcription repressor OFP12-like [Cucurbita maxima])

HSP 1 Score: 275.8 bits (704), Expect = 2.9e-70
Identity = 155/196 (79.08%), Postives = 169/196 (86.22%), Query Frame = 0


Query: 1   MSNLKFLNNLHFFFSKLKFSTPAAVIAAHTPPSDCYFTSNPISSTVDD--DDGFFSTSSD 60
           MSN +FL N HFF  KLKFS PAAV  AH+P SDCYFTSNPIS T     DDGFFSTSSD
Sbjct: 1   MSN-RFLKNFHFF--KLKFSPPAAV--AHSPSSDCYFTSNPISLTPSSLADDGFFSTSSD 60

Query: 61  SDDSISDDLAAILASRRFFFSSPGRSNSIFEYSSASRRQAHDVVVSDGLKVPKYSMDPYA 120
           +DDSISDDLA +LASRRFFFSSPGRSNSI + SSA+RR++HD+VVS+GL+VPKYSMDPYA
Sbjct: 61  ADDSISDDLATVLASRRFFFSSPGRSNSICD-SSAARRRSHDIVVSEGLEVPKYSMDPYA 120

Query: 121 DFRRSMQEMVEARELEDVRSDSEFLRELLSCYLRLNPKDTHKFIVRAFADLVLSMLASSS 180
           DFRRSMQEMVEARELE VRSDSEFLRELLSCYLRLNPK+THKFIVRAFADL+L +L SSS
Sbjct: 121 DFRRSMQEMVEARELESVRSDSEFLRELLSCYLRLNPKNTHKFIVRAFADLLLCLLTSSS 180

Query: 181 PAPSPAAKARRKVVMF 195
             P  A KARRK VMF
Sbjct: 181 STPPSAPKARRKGVMF 190

[Close]

BLAST of Clc06G06530 vs. NCBI nr
Match: XP_023549131.1 (transcription repressor OFP12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 274.6 bits (701), Expect = 6.4e-70
Identity = 156/196 (79.59%), Postives = 169/196 (86.22%), Query Frame = 0


Query: 1   MSNLKFLNNLHFFFSKLKFSTPAAVIAAHTPPSDCYFTSNPISSTVDD--DDGFFSTSSD 60
           MSN +FL   HF FSKLKFS PAAV  AH+P SDCYFTSNPIS T     DDGFFSTSSD
Sbjct: 1   MSN-RFLK--HFHFSKLKFSPPAAV--AHSPSSDCYFTSNPISLTPSSLADDGFFSTSSD 60

Query: 61  SDDSISDDLAAILASRRFFFSSPGRSNSIFEYSSASRRQAHDVVVSDGLKVPKYSMDPYA 120
           +DDSISDDLA +LASRRFFFSSPGRSNSI + SS +RR++HDVVVS+GL+VPKYSMDPYA
Sbjct: 61  ADDSISDDLATLLASRRFFFSSPGRSNSICD-SSTARRRSHDVVVSEGLEVPKYSMDPYA 120

Query: 121 DFRRSMQEMVEARELEDVRSDSEFLRELLSCYLRLNPKDTHKFIVRAFADLVLSMLASSS 180
           DFRRSMQEMVEARELE VRSDSEFLRELLSCYLRLNPK+THKFIVRAFADL+L +L SSS
Sbjct: 121 DFRRSMQEMVEARELESVRSDSEFLRELLSCYLRLNPKNTHKFIVRAFADLLLCLLTSSS 180

Query: 181 PAPSPAAKARRKVVMF 195
            AP  A KARRK VMF
Sbjct: 181 SAPPSAPKARRKGVMF 190

[Close]

BLAST of Clc06G06530 vs. NCBI nr
Match: XP_008447310.1 (PREDICTED: transcription repressor OFP12-like [Cucumis melo])

HSP 1 Score: 271.9 bits (694), Expect = 4.2e-69
Identity = 146/186 (78.49%), Postives = 163/186 (87.63%), Query Frame = 0


Query: 12  FFFSKLKFSTPAAVIAAHTPPSDCYFTSNPISSTVDDD-DGFFSTSSDSDDSISDDLAAI 71
           F   + +  T A +IA+HTPPSDCYFTSNPISST  +D   FFSTSSD+DDSISDDLAA+
Sbjct: 51  FLLLQTQILTSAPLIASHTPPSDCYFTSNPISSTTAEDCHDFFSTSSDADDSISDDLAAV 110

Query: 72  LASRRFFFSSPGRSNSIFEYSSASR-RQAHDVVVSDGLKVPKYSMDPYADFRRSMQEMVE 131
           L+SRRFFFSSPGRSNSIFEYSS SR +Q HDVVVS+G K+ KYSMDPYADFRRSMQEMVE
Sbjct: 111 LSSRRFFFSSPGRSNSIFEYSSCSRPQQPHDVVVSEGHKIRKYSMDPYADFRRSMQEMVE 170

Query: 132 ARELEDVRSDSEFLRELLSCYLRLNPKDTHKFIVRAFADLVLSMLASSSPAPSPAAKARR 191
           ARELEDVRSDSEFLRELLSCYLRLNPK+THKFIV+AF+DLVLS+LASSS  P+PA+  RR
Sbjct: 171 ARELEDVRSDSEFLRELLSCYLRLNPKNTHKFIVKAFSDLVLSLLASSSTTPAPASIGRR 230

Query: 192 KVVMFG 196
           KVV FG
Sbjct: 231 KVVTFG 236

[Close]

BLAST of Clc06G06530 vs. ExPASy Swiss-Prot
Match: F4I8R6 (Transcription repressor OFP12 OS=Arabidopsis thaliana OX=3702 GN=OFP12 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-21
Identity = 69/142 (48.59%), Postives = 88/142 (61.97%), Query Frame = 0


Query: 39  SNPISSTVDDDDGFFSTSSDSDDSISDDLAAILASRRFFFSSPGRSNSIFEYSSASRRQA 98
           S+  S++ DD D +    +  DDS   DL A+LASRRFFFSSPG SNSI +      R  
Sbjct: 81  SSSSSASYDDSDNY--GFAPDDDSPPPDLTAVLASRRFFFSSPGCSNSITDSPDLRCRDN 140

Query: 99  HDV---VVSDGLKVPKY--SMDPYADFRRSMQEMVEARELEDVRSDSEFLRELLSCYLRL 158
           +D    +++ G  V  Y  S DPY DFRRSMQEM++A          EFL ELL  YL L
Sbjct: 141 YDTATRLLTGGTAVKHYVQSPDPYNDFRRSMQEMIDAVTNAGDLRRYEFLHELLLSYLSL 200

Query: 159 NPKDTHKFIVRAFADLVLSMLA 176
           N  DTHKFI+RAFAD+++S+L+
Sbjct: 201 NAADTHKFIIRAFADILVSLLS 220

[Close]

BLAST of Clc06G06530 vs. ExPASy Swiss-Prot
Match: Q9SKY9 (Transcription repressor OFP16 OS=Arabidopsis thaliana OX=3702 GN=OFP16 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.7e-17
Identity = 69/170 (40.59%), Postives = 92/170 (54.12%), Query Frame = 0


Query: 41  PISSTVDDDDGFFSTSSDSDDS-ISDDLAAILASRRFFFSSPGRSNSIFEYSSASRRQAH 100
           P SST        S+S+ S +S IS D++A  ASRRFFFSSPGRSN+I +      R+  
Sbjct: 69  PSSSTTTTPAATSSSSTSSYESDISPDVSAAFASRRFFFSSPGRSNAITDSPEPRSREFS 128

Query: 101 D---------------------------VVVSDGLKVPKY--SMDPYADFRRSMQEMVEA 160
           D                            ++S G  V ++  S DP  DFRRSMQEM++A
Sbjct: 129 DNYDDATITSTKKKKKKVYDNSVTTTTTRLISGGTAVTQHVDSPDPLTDFRRSMQEMIDA 188

Query: 161 R----EL-EDVRSDSEFLRELLSCYLRLNPKDTHKFIVRAFADLVLSMLA 176
                EL  D     +FL ELL  YL LNP DTHKF++RAF+D+++S+L+
Sbjct: 189 AIDAGELSRDPNDGYDFLDELLLTYLSLNPADTHKFVIRAFSDILVSLLS 238

[Close]

BLAST of Clc06G06530 vs. ExPASy Swiss-Prot
Match: O23341 (Transcription repressor OFP11 OS=Arabidopsis thaliana OX=3702 GN=OFP11 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.9e-16
Identity = 50/85 (58.82%), Postives = 62/85 (72.94%), Query Frame = 0


Query: 102 VVSDGLKVPKY--SMDPYADFRRSMQEMVEAREL-EDVRSDSEFLRELLSCYLRLNPKDT 161
           ++S G  + K+  S DPY DF RSM+EMVEAR+L  DV +D E+L ELL CYL LNPK T
Sbjct: 96  LLSGGTAIMKHIESPDPYRDFGRSMREMVEARDLTRDVVADREYLHELLFCYLYLNPKHT 155

Query: 162 HKFIVRAFADLVLSMLASSSPAPSP 184
           H+FIV AFAD +L +L   SP+PSP
Sbjct: 156 HRFIVSAFADTLLWLL---SPSPSP 177

[Close]

BLAST of Clc06G06530 vs. ExPASy Swiss-Prot
Match: Q9SJ45 (Transcription repressor OFP15 OS=Arabidopsis thaliana OX=3702 GN=OFP15 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.6e-10
Identity = 48/143 (33.57%), Postives = 80/143 (55.94%), Query Frame = 0


Query: 39  SNPISSTVDDDDGFFSTSSDSDDSISDDLAAILASRRFFFSSPGRSNSIFEYSSASRRQA 98
           +NPI    DDD+       +  DS+ + +  + +S R  F S G +NSI E +++ R + 
Sbjct: 45  TNPIHDQ-DDDELDLLDPPEITDSVENVIKGLRSSERLIFESKGETNSILEEATSKREEE 104

Query: 99  HDVVVSDGLKV-PKYSMDPYADFRRSMQEMVEARELEDVRSDSEFLRELLSCYLRLNPKD 158
            +    +G  +    S DPY+DF+RSM+EMVEA  L     D + L +LL  +L++N K 
Sbjct: 105 DE---EEGFMLFSLESDDPYSDFKRSMEEMVEAHAL---HHDWKSLEKLLLQFLKVNAKT 164

Query: 159 THKFIVRAFADLVLSMLASSSPA 181
           +H++I  AF DL++++   +  A
Sbjct: 165 SHRYIFAAFVDLLMNLALDTKKA 180

[Close]

BLAST of Clc06G06530 vs. ExPASy Swiss-Prot
Match: Q9SVD5 (Transcription repressor OFP18 OS=Arabidopsis thaliana OX=3702 GN=OFP18 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.0e-10
Identity = 60/177 (33.90%), Postives = 88/177 (49.72%), Query Frame = 0


Query: 9   NLHFFFSKLKF--STPAAVIAAHTPPSDCYFTSNPISSTVDDDDGFFSTSSDSD-----D 68
           NL    SK  F  + P  V     PP    F+S+P SS+      F STS   +     +
Sbjct: 39  NLKTISSKASFIVNKPKDVYEPEPPPRS--FSSSPSSSSY---SSFSSTSHAIENPPEIE 98

Query: 69  SISDDLAAILASRRFFFSSPGRSNSIFEYSSASRRQAHDVVVSDGLKVPKYSMDPYADFR 128
           SI + +  + +S+R  F   G SNSI E   A++R  H+      + +   S DPY DF+
Sbjct: 99  SIENVIKGLKSSKRLIFERRGTSNSILE--EATKRDDHEEEEDGLMLLSLESNDPYTDFK 158

Query: 129 RSMQEMVEARELEDVRSDSEFLRELLSCYLRLNPKDTHKFIVRAFADLVLSMLASSS 179
            SM++MVE   L     D   L +LL  +L++N K +H++I  AF DLVL++    S
Sbjct: 159 NSMEKMVEVHVL---HHDWISLEKLLFWFLKVNVKASHRYIFAAFVDLVLNLAVGPS 205

[Close]

BLAST of Clc06G06530 vs. ExPASy TrEMBL
Match: A0A0A0K3Z6 (Transcription repressor OS=Cucumis sativus OX=3659 GN=Csa_7G234150 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.5e-80
Identity = 165/194 (85.05%), Postives = 179/194 (92.27%), Query Frame = 0


Query: 1   MSNLKFLNNLHFFFSKLKFSTPAAVIAAHTPPSDCYFTSNPISSTVDDD-DGFFSTSSDS 60
           MSNLKFLNNL+ FFSKLKFS P  VIA+HTPPSDCYFTSNPISST  DD D FFSTSSD+
Sbjct: 1   MSNLKFLNNLYSFFSKLKFSPPPPVIASHTPPSDCYFTSNPISSTTADDCDDFFSTSSDA 60

Query: 61  DDSISDDLAAILASRRFFFSSPGRSNSIFEYSSASRR-QAHDVVVSDGLKVPKYSMDPYA 120
           DDSISDDLAA+LASRRFFFSSPGRSNSIFEYSS SRR Q HDV+VS+G ++ KYSMDPYA
Sbjct: 61  DDSISDDLAALLASRRFFFSSPGRSNSIFEYSSCSRRQQPHDVLVSEGHRIRKYSMDPYA 120

Query: 121 DFRRSMQEMVEARELEDVRSDSEFLRELLSCYLRLNPKDTHKFIVRAFADLVLSMLASSS 180
           DFRRSMQEMVEARELEDVRSDSEFLRELLSCYLRLNPK+THKFIV+AF+DLVLS+LASSS
Sbjct: 121 DFRRSMQEMVEARELEDVRSDSEFLRELLSCYLRLNPKNTHKFIVKAFSDLVLSLLASSS 180

Query: 181 PAPSPAAKARRKVV 193
           P P+PA+ ARRKVV
Sbjct: 181 PTPAPASIARRKVV 194

[Close]

BLAST of Clc06G06530 vs. ExPASy TrEMBL
Match: A0A6J1KZU4 (Transcription repressor OS=Cucurbita maxima OX=3661 GN=LOC111499099 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.4e-70
Identity = 155/196 (79.08%), Postives = 169/196 (86.22%), Query Frame = 0


Query: 1   MSNLKFLNNLHFFFSKLKFSTPAAVIAAHTPPSDCYFTSNPISSTVDD--DDGFFSTSSD 60
           MSN +FL N HFF  KLKFS PAAV  AH+P SDCYFTSNPIS T     DDGFFSTSSD
Sbjct: 1   MSN-RFLKNFHFF--KLKFSPPAAV--AHSPSSDCYFTSNPISLTPSSLADDGFFSTSSD 60

Query: 61  SDDSISDDLAAILASRRFFFSSPGRSNSIFEYSSASRRQAHDVVVSDGLKVPKYSMDPYA 120
           +DDSISDDLA +LASRRFFFSSPGRSNSI + SSA+RR++HD+VVS+GL+VPKYSMDPYA
Sbjct: 61  ADDSISDDLATVLASRRFFFSSPGRSNSICD-SSAARRRSHDIVVSEGLEVPKYSMDPYA 120

Query: 121 DFRRSMQEMVEARELEDVRSDSEFLRELLSCYLRLNPKDTHKFIVRAFADLVLSMLASSS 180
           DFRRSMQEMVEARELE VRSDSEFLRELLSCYLRLNPK+THKFIVRAFADL+L +L SSS
Sbjct: 121 DFRRSMQEMVEARELESVRSDSEFLRELLSCYLRLNPKNTHKFIVRAFADLLLCLLTSSS 180

Query: 181 PAPSPAAKARRKVVMF 195
             P  A KARRK VMF
Sbjct: 181 STPPSAPKARRKGVMF 190

[Close]

BLAST of Clc06G06530 vs. ExPASy TrEMBL
Match: A0A1S3BH53 (Transcription repressor OS=Cucumis melo OX=3656 GN=LOC103489781 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 2.0e-69
Identity = 146/186 (78.49%), Postives = 163/186 (87.63%), Query Frame = 0


Query: 12  FFFSKLKFSTPAAVIAAHTPPSDCYFTSNPISSTVDDD-DGFFSTSSDSDDSISDDLAAI 71
           F   + +  T A +IA+HTPPSDCYFTSNPISST  +D   FFSTSSD+DDSISDDLAA+
Sbjct: 51  FLLLQTQILTSAPLIASHTPPSDCYFTSNPISSTTAEDCHDFFSTSSDADDSISDDLAAV 110

Query: 72  LASRRFFFSSPGRSNSIFEYSSASR-RQAHDVVVSDGLKVPKYSMDPYADFRRSMQEMVE 131
           L+SRRFFFSSPGRSNSIFEYSS SR +Q HDVVVS+G K+ KYSMDPYADFRRSMQEMVE
Sbjct: 111 LSSRRFFFSSPGRSNSIFEYSSCSRPQQPHDVVVSEGHKIRKYSMDPYADFRRSMQEMVE 170

Query: 132 ARELEDVRSDSEFLRELLSCYLRLNPKDTHKFIVRAFADLVLSMLASSSPAPSPAAKARR 191
           ARELEDVRSDSEFLRELLSCYLRLNPK+THKFIV+AF+DLVLS+LASSS  P+PA+  RR
Sbjct: 171 ARELEDVRSDSEFLRELLSCYLRLNPKNTHKFIVKAFSDLVLSLLASSSTTPAPASIGRR 230

Query: 192 KVVMFG 196
           KVV FG
Sbjct: 231 KVVTFG 236

[Close]

BLAST of Clc06G06530 vs. ExPASy TrEMBL
Match: A0A6J1H878 (Transcription repressor OS=Cucurbita moschata OX=3662 GN=LOC111460453 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 4.5e-69
Identity = 153/198 (77.27%), Postives = 169/198 (85.35%), Query Frame = 0


Query: 2   SNLKFLNN---LHFFFSKLKFSTPAAVIAAHTPPSDCYFTSNPISSTVDD--DDGFFSTS 61
           S+LK ++N    HF FSKLKFS PAAV  AH+  SDCYFTSNPIS T     DDGFFSTS
Sbjct: 30  SHLKKMSNRFLKHFHFSKLKFSPPAAV--AHSSSSDCYFTSNPISLTPSSLADDGFFSTS 89

Query: 62  SDSDDSISDDLAAILASRRFFFSSPGRSNSIFEYSSASRRQAHDVVVSDGLKVPKYSMDP 121
           SD+DDSISDDLA +LASRRFFFSSPGRSNSI + SS +RR++HDVVVS+GL+VPKYSMDP
Sbjct: 90  SDADDSISDDLATLLASRRFFFSSPGRSNSICD-SSTARRRSHDVVVSEGLEVPKYSMDP 149

Query: 122 YADFRRSMQEMVEARELEDVRSDSEFLRELLSCYLRLNPKDTHKFIVRAFADLVLSMLAS 181
           YADFRRSMQEMVEARELE VRSDSEFLR+LLSCYLRLNPK+THKFIVRAFADL+L +L S
Sbjct: 150 YADFRRSMQEMVEARELESVRSDSEFLRDLLSCYLRLNPKNTHKFIVRAFADLLLCLLTS 209

Query: 182 SSPAPSPAAKARRKVVMF 195
           SS AP  A KARRK VMF
Sbjct: 210 SSSAPPSAPKARRKGVMF 224

[Close]

BLAST of Clc06G06530 vs. ExPASy TrEMBL
Match: A0A6J1CA57 (Transcription repressor OS=Momordica charantia OX=3673 GN=LOC111009793 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.5e-35
Identity = 107/183 (58.47%), Postives = 123/183 (67.21%), Query Frame = 0


Query: 1   MSNLKFLNNLHFFFSKLKFSTPAAVIAAHTPPSDCYFTSNPISSTVDDDDGFFSTSSDSD 60
           MSNL FLN    FFSK K    AA  AA    S+             D DG     S SD
Sbjct: 1   MSNL-FLN----FFSKRKCLPTAAATAAAPANSN------------SDGDGDGDCFSSSD 60

Query: 61  DSI-SDDLAAILASRRFFFSSPGRSNSIFEYSSASRRQAHDVVVSDGLKVPKYSMDPYAD 120
           DSI S DLA +LASRRFFFSSPGRSNSI E SS     +     S  +K+ KYS+DPYAD
Sbjct: 61  DSISSSDLAGVLASRRFFFSSPGRSNSILESSSPPPPPS-----SSAVKMGKYSVDPYAD 120

Query: 121 FRRSMQEMVEARELEDVRSDSEFLRELLSCYLRLNPKDTHKFIVRAFADLVLSMLASSSP 180
           FRRSM+EM+EARE+E+VRSD E+L ELLSCYLRLNP  THKFI+ AF+DL+LS+LA +SP
Sbjct: 121 FRRSMEEMIEAREMENVRSDWEYLEELLSCYLRLNPNHTHKFIITAFSDLLLSLLA-NSP 160

Query: 181 APS 183
           APS
Sbjct: 181 APS 160

[Close]

BLAST of Clc06G06530 vs. TAIR 10
Match: AT1G05420.1 (ovate family protein 12 )

HSP 1 Score: 104.8 bits (260), Expect = 8.2e-23
Identity = 69/142 (48.59%), Postives = 88/142 (61.97%), Query Frame = 0


Query: 39  SNPISSTVDDDDGFFSTSSDSDDSISDDLAAILASRRFFFSSPGRSNSIFEYSSASRRQA 98
           S+  S++ DD D +    +  DDS   DL A+LASRRFFFSSPG SNSI +      R  
Sbjct: 81  SSSSSASYDDSDNY--GFAPDDDSPPPDLTAVLASRRFFFSSPGCSNSITDSPDLRCRDN 140

Query: 99  HDV---VVSDGLKVPKY--SMDPYADFRRSMQEMVEARELEDVRSDSEFLRELLSCYLRL 158
           +D    +++ G  V  Y  S DPY DFRRSMQEM++A          EFL ELL  YL L
Sbjct: 141 YDTATRLLTGGTAVKHYVQSPDPYNDFRRSMQEMIDAVTNAGDLRRYEFLHELLLSYLSL 200

Query: 159 NPKDTHKFIVRAFADLVLSMLA 176
           N  DTHKFI+RAFAD+++S+L+
Sbjct: 201 NAADTHKFIIRAFADILVSLLS 220

[Close]

BLAST of Clc06G06530 vs. TAIR 10
Match: AT2G32100.1 (ovate family protein 16 )

HSP 1 Score: 90.9 bits (224), Expect = 1.2e-18
Identity = 69/170 (40.59%), Postives = 92/170 (54.12%), Query Frame = 0


Query: 41  PISSTVDDDDGFFSTSSDSDDS-ISDDLAAILASRRFFFSSPGRSNSIFEYSSASRRQAH 100
           P SST        S+S+ S +S IS D++A  ASRRFFFSSPGRSN+I +      R+  
Sbjct: 69  PSSSTTTTPAATSSSSTSSYESDISPDVSAAFASRRFFFSSPGRSNAITDSPEPRSREFS 128

Query: 101 D---------------------------VVVSDGLKVPKY--SMDPYADFRRSMQEMVEA 160
           D                            ++S G  V ++  S DP  DFRRSMQEM++A
Sbjct: 129 DNYDDATITSTKKKKKKVYDNSVTTTTTRLISGGTAVTQHVDSPDPLTDFRRSMQEMIDA 188

Query: 161 R----EL-EDVRSDSEFLRELLSCYLRLNPKDTHKFIVRAFADLVLSMLA 176
                EL  D     +FL ELL  YL LNP DTHKF++RAF+D+++S+L+
Sbjct: 189 AIDAGELSRDPNDGYDFLDELLLTYLSLNPADTHKFVIRAFSDILVSLLS 238

[Close]

BLAST of Clc06G06530 vs. TAIR 10
Match: AT4G14860.1 (ovate family protein 11 )

HSP 1 Score: 87.4 bits (215), Expect = 1.4e-17
Identity = 50/85 (58.82%), Postives = 62/85 (72.94%), Query Frame = 0


Query: 102 VVSDGLKVPKY--SMDPYADFRRSMQEMVEAREL-EDVRSDSEFLRELLSCYLRLNPKDT 161
           ++S G  + K+  S DPY DF RSM+EMVEAR+L  DV +D E+L ELL CYL LNPK T
Sbjct: 96  LLSGGTAIMKHIESPDPYRDFGRSMREMVEARDLTRDVVADREYLHELLFCYLYLNPKHT 155

Query: 162 HKFIVRAFADLVLSMLASSSPAPSP 184
           H+FIV AFAD +L +L   SP+PSP
Sbjct: 156 HRFIVSAFADTLLWLL---SPSPSP 177

[Close]

BLAST of Clc06G06530 vs. TAIR 10
Match: AT2G36050.1 (ovate family protein 15 )

HSP 1 Score: 67.8 bits (164), Expect = 1.1e-11
Identity = 48/143 (33.57%), Postives = 80/143 (55.94%), Query Frame = 0


Query: 39  SNPISSTVDDDDGFFSTSSDSDDSISDDLAAILASRRFFFSSPGRSNSIFEYSSASRRQA 98
           +NPI    DDD+       +  DS+ + +  + +S R  F S G +NSI E +++ R + 
Sbjct: 45  TNPIHDQ-DDDELDLLDPPEITDSVENVIKGLRSSERLIFESKGETNSILEEATSKREEE 104

Query: 99  HDVVVSDGLKV-PKYSMDPYADFRRSMQEMVEARELEDVRSDSEFLRELLSCYLRLNPKD 158
            +    +G  +    S DPY+DF+RSM+EMVEA  L     D + L +LL  +L++N K 
Sbjct: 105 DE---EEGFMLFSLESDDPYSDFKRSMEEMVEAHAL---HHDWKSLEKLLLQFLKVNAKT 164

Query: 159 THKFIVRAFADLVLSMLASSSPA 181
           +H++I  AF DL++++   +  A
Sbjct: 165 SHRYIFAAFVDLLMNLALDTKKA 180

[Close]

BLAST of Clc06G06530 vs. TAIR 10
Match: AT3G52540.1 (ovate family protein 18 )

HSP 1 Score: 67.4 bits (163), Expect = 1.5e-11
Identity = 60/177 (33.90%), Postives = 88/177 (49.72%), Query Frame = 0


Query: 9   NLHFFFSKLKF--STPAAVIAAHTPPSDCYFTSNPISSTVDDDDGFFSTSSDSD-----D 68
           NL    SK  F  + P  V     PP    F+S+P SS+      F STS   +     +
Sbjct: 39  NLKTISSKASFIVNKPKDVYEPEPPPRS--FSSSPSSSSY---SSFSSTSHAIENPPEIE 98

Query: 69  SISDDLAAILASRRFFFSSPGRSNSIFEYSSASRRQAHDVVVSDGLKVPKYSMDPYADFR 128
           SI + +  + +S+R  F   G SNSI E   A++R  H+      + +   S DPY DF+
Sbjct: 99  SIENVIKGLKSSKRLIFERRGTSNSILE--EATKRDDHEEEEDGLMLLSLESNDPYTDFK 158

Query: 129 RSMQEMVEARELEDVRSDSEFLRELLSCYLRLNPKDTHKFIVRAFADLVLSMLASSS 179
            SM++MVE   L     D   L +LL  +L++N K +H++I  AF DLVL++    S
Sbjct: 159 NSMEKMVEVHVL---HHDWISLEKLLFWFLKVNVKASHRYIFAAFVDLVLNLAVGPS 205

The following BLAST results are available for this feature:

BLAST of Clc06G06530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876316.1	2.4e-80	85.57	LOW QUALITY PROTEIN: transcription repressor OFP12-like [Benincasa hispida]	[more]
XP_011659018.1	3.1e-80	85.05	transcription repressor OFP12 [Cucumis sativus] >KGN44243.1 hypothetical protein...	[more]
XP_023006330.1	2.9e-70	79.08	transcription repressor OFP12-like [Cucurbita maxima]	[more]
XP_023549131.1	6.4e-70	79.59	transcription repressor OFP12-like [Cucurbita pepo subsp. pepo]	[more]
XP_008447310.1	4.2e-69	78.49	PREDICTED: transcription repressor OFP12-like [Cucumis melo]	[more]

BLAST of Clc06G06530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I8R6	1.2e-21	48.59	Transcription repressor OFP12 OS=Arabidopsis thaliana OX=3702 GN=OFP12 PE=1 SV=1	[more]
Q9SKY9	1.7e-17	40.59	Transcription repressor OFP16 OS=Arabidopsis thaliana OX=3702 GN=OFP16 PE=2 SV=1	[more]
O23341	1.9e-16	58.82	Transcription repressor OFP11 OS=Arabidopsis thaliana OX=3702 GN=OFP11 PE=2 SV=1	[more]
Q9SJ45	1.6e-10	33.57	Transcription repressor OFP15 OS=Arabidopsis thaliana OX=3702 GN=OFP15 PE=1 SV=1	[more]
Q9SVD5	2.0e-10	33.90	Transcription repressor OFP18 OS=Arabidopsis thaliana OX=3702 GN=OFP18 PE=2 SV=1	[more]

BLAST of Clc06G06530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3Z6	1.5e-80	85.05	Transcription repressor OS=Cucumis sativus OX=3659 GN=Csa_7G234150 PE=4 SV=1	[more]
A0A6J1KZU4	1.4e-70	79.08	Transcription repressor OS=Cucurbita maxima OX=3661 GN=LOC111499099 PE=4 SV=1	[more]
A0A1S3BH53	2.0e-69	78.49	Transcription repressor OS=Cucumis melo OX=3656 GN=LOC103489781 PE=4 SV=1	[more]
A0A6J1H878	4.5e-69	77.27	Transcription repressor OS=Cucurbita moschata OX=3662 GN=LOC111460453 PE=4 SV=1	[more]
A0A6J1CA57	1.5e-35	58.47	Transcription repressor OS=Momordica charantia OX=3673 GN=LOC111009793 PE=4 SV=1	[more]

BLAST of Clc06G06530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05420.1	8.2e-23	48.59	ovate family protein 12	[more]
AT2G32100.1	1.2e-18	40.59	ovate family protein 16	[more]
AT4G14860.1	1.4e-17	58.82	ovate family protein 11	[more]
AT2G36050.1	1.1e-11	33.57	ovate family protein 15	[more]
AT3G52540.1	1.5e-11	33.90	ovate family protein 18	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006458	Ovate protein family, C-terminal	PFAM	PF04844	Ovate	coord: 113..173 e-value: 9.7E-25 score: 86.4
IPR006458	Ovate protein family, C-terminal	TIGRFAM	TIGR01568	TIGR01568	coord: 109..173 e-value: 1.7E-27 score: 93.6
IPR006458	Ovate protein family, C-terminal	PROSITE	PS51754	OVATE	coord: 109..172 score: 18.295233
IPR038933	Ovate protein family	PANTHER	PTHR33057	TRANSCRIPTION REPRESSOR OFP7-RELATED	coord: 38..179
None	No IPR available	PANTHER	PTHR33057:SF21	TRANSCRIPTION REPRESSOR OFP12	coord: 38..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G06530.1	Clc06G06530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus