Clc06G05740 (gene) Watermelon (cordophanus) v2

Overview
NameClc06G05740
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
LocationClcChr06: 5889553 .. 5892872 (-)
RNA-Seq ExpressionClc06G05740
SyntenyClc06G05740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCGAGCACTGAACAGTGGATCATATATAAGGGACGAAACCGCCATTGAATTTATAATTTCAATCCTCGCTTTTCTGTTCCCGCTCACTCACTCGTTCTTCAGTTCTCCCTCCTCCGATCCATGGCCAATCGCCAACATTCTCTCACGTTGAACCTCGAATCATAATTTATGAAGATTTTCATTCATCTTCTATCGCTTCTGTTTATCTGAATCACGGTTTGTGAAGTTTTTCACTCTTCTTCCTTCGGCCGCTCCATTCTGAACCTTGGCAAAGCGAACAGAGGCAATGTTAAGCTAGTATCACATCTCCGGGACTTCCGTAGGTGGAGGAAACTTCTCGGCAACGTTTTTTGCGCTTTATTTCAAGTCAATCCGCAAATTTCTCGGTTGTAGTCTGCTACTTGTGCAGTCAATTGCGGCTGTAGGTTTGATATTCTAAACTGTGCTCTTGTAGATTATATATAATGGAAGGAAGACGACGATCGAGTAATCGATGATTAAGCGCGTTGATGTATAGCTGACGATCAGTGTTCTGGATGAAGCAAATCAATCGGAGTCACTTATTGTACAAAGAAGGAATTCTCAGCTGGTTTTTGCTCCAAGTCGTTTTTTCAAAACTCGAAGAAGTGAGTTGCGCATCTGTTTAATCTCTGACTAGTTGAACTTTTGATTTTGCGTTGTATTGTATCTAAGCTGGAATATGGACGGGATTTAGGTTTCTGCGGGAACAGGTGTGCTTCACGAACTAGCTGTATGCTTATCCTTCACTGACCGCTGGTTAGGTTCTTGATCCCTTAGATAACTAGATTGAGCTAAATTTTGTTTACTTCCAAGATTTTCTATTCTACATTTTCTGCTGCCGGAGCATCTAAAATCTTTCGAACTAGCTAGGAATTCTTCATTTTCTTCAACTCTGGCTTCCTAGTCCTTCACTTGGACATGTTAGATAATTCTGAGTTTTGCTTTCCAGGGAGGAATTTGTCGTCAAATATTTGATCAGGTTTGGTCCTATTGGGGTACTTTTATGGAGTCTCATGAGCAAATAGGATTCAAGCCTACAGCGTTAGGTACTATTACAACTCTTCTCCGCTTTCTGATAAAGATATTTTAATATTTCCATTAAGCAGAAAAAATGTGCTACTAAATTATCTGCTCGATTCAACTGTGTGATGGACACTCCGTAATGAAATAATCAAACAGAACTTTTGTGAGAAGAAAAAATTCACTTGCATTGAGAACTCTTCAATAAACTATAAACTTGTTCACACTTTTTGTTTGAACTCTGCGTGTCTTTTTTTCCCCACGCATTTCCATCAAATTCACCAAAGATAATGCTAAACAATCTAGATCTCATAATAAATCGCAGCAAAGAGGAGAAAAACCTTACTCTTTGAGCTTCAATCAGTAATTGTTTCGAGGTCCAATCTTCAAGATCCATTCCTTCCACTGATCGTGTTTGCAGTAGCAGATAATTGTTCGTTAAAGTATCTAGTTACATATTATCAGTTTCTCTAAAATCTTAATAGGCGAGGATTTTGGACAATCCATTGTTCTGTATTAGTTTAATTGTTTCTTGCCCAGTGTCCATGTGATTGTCTTTGTTTCTAAGTTATTGATTTTGTATTTGGCTTATTTTATTTTCACTCCCTCTGAGAGTTTTTAAACCTTGAACATTTATTTATTTTCATTATATCAACAAGAAGTTGTTTCTTGTCTCTATCCTACGAATCCAGACATTAAAGTCCAACAGCCTTAAAATGTCTAAACAACATTTGACACTAGCAAGATAATAGATGGAATGTTTAAAGTGAAACTAAAACGTGTATGGATATTCACATTGGGTGGTTTTGCTAGAGTCCAATCGAGAGGCAACATACAATAGGTTTAAACTTGACTCCCTCTGGTCCTGATATTGTCATAGAGAAGTCTTTTAACTAAATACCTGTACGAAGAAGCATCGCTAAGAACATTATCATCAAAAGTATCTTACTGAATTTTTGGATTCAATGAGAGAAGGCTTACGGCTCAAAAATATCATAAATCAGAATCAAATAGTTGAAGAGTCTAGTGACGTTTAGAAAGATATATACCTCTAGAGATCAAATCTCTAGACCAAGAAAAGTTTTAAACTACCAAGATCCTTTTGCTTGGGCTGCCCATTAAGAAATCTTCCAATGTTAGGGCCACCCACATCAGATCCAGTAATTGAAATTTGAAATATCAATGGCATATACTGCCAACAAGTTTTGAACTTTTTAGAAAAAGGTCCTGAACACTTACTGACGAAGGAATGTTAGGGTTATAAATTGTTTAAAACAGGAACAGAAACAGCACAAAAGAAGAAGGAAATTTAGAGAACCAATAACCATTGTTTGTAGGCTTCTTTTAAATCATAGATGGATTTCTGAACCTTAGTAACCAAGGGATACCCCTCATGACTCTATATAAGAAAACGTAAGGGTAGATCCACATTATCTCCTTAAACAATCACTAGTGAGGAAGACATTATTTGCATCAATTGTCTTAAAAGGCCAATTATAAATAGACGTGATCACAAAGAGAATGTTTTCAGGGGCAAGCTCTGCTGCAGGAGAGAAGTAGAAACCCTAACCTTCTTGTTGGGTTTATTTTAACGATCACTATTATATTTCCCCCCATATTTCCACCTTATTTATATTCGATCTTATAAGTACCTCCACTTTTTTTAATATCCCTGAGTGTTCGGACCGGCTTACACGTACTTCAGCTAATCTCACGAGACAACTCGTTTAACTCTACAACATTTGGATGCTAAGGAAACTCGTAGAATATTAAATCCTAATTAGTAGTTACGTGGATTGAACCTATTACCTCTTATTAAATCTAACCCTTTTATTTACCACACTAACCCATGATGGTTTCTTATAAGGCATCTGTAATCAATAGAATGGTTAACTTGGTCCAAACTTGGTTTGGTAAGAAGGAAGGAAATTTTACGCAGCCAAAAACCTTGGGAGAAGTATAATGTATTCTCTCTCTATCTGAAAGGAAGGGAGAAGTATAATCTACTTGTGAGTCATAAAGTAGTTGCAAATGGGTTCGATTTTGTGACGTTCTTCCTTGTTTGATTATGTGCAGGCTTTTTCTTTGCTTATGACTAGAAGGGTAACCTTGTACTTTGTAGCATATAATATTTGTCATGAGCGTAACTTATGGAAAGGAAAACCACAATAAGTACATATTGGTCTGTCCCTTTTCTGCCGTTTAATAGAGCTATTCTTTGGCGTCTTAAGATTTTACATAAACCGTCGTGGAACCACTGCCGTTGGAGACTAA

mRNA sequence

ATGAAGCGAGCACTGAACAGTGGATCATATATAAGGGACGAAACCGCCATTGAATTTATAATTTCAATCCTCGCTTTTCTGTTCCCGCTCACTCACTCGTTCTTCAGTTCTCCCTCCTCCGATCCATGGCCAATCGCCAACATTCTCTCACTTTTTCACTCTTCTTCCTTCGGCCGCTCCATTCTGAACCTTGGCAAAGCGAACAGAGGCAATGTTAAGCTAGTATCACATCTCCGGGACTTCCGTAGGTGGAGGAAACTTCTCGGCAACCTGACGATCAGTGTTCTGGATGAAGCAAATCAATCGGAGTCACTTATTGTACAAAGAAGGAATTCTCAGCTGGGAGGAATTTGTCGTCAAATATTTGATCAGGTTTGGTCCTATTGGGGTACTTTTATGGAGTCTCATGAGCAAATAGGATTCAAGCCTACAGCGTTAGAGCTATTCTTTGGCGTCTTAAGATTTTACATAAACCGTCGTGGAACCACTGCCGTTGGAGACTAA

Coding sequence (CDS)

ATGAAGCGAGCACTGAACAGTGGATCATATATAAGGGACGAAACCGCCATTGAATTTATAATTTCAATCCTCGCTTTTCTGTTCCCGCTCACTCACTCGTTCTTCAGTTCTCCCTCCTCCGATCCATGGCCAATCGCCAACATTCTCTCACTTTTTCACTCTTCTTCCTTCGGCCGCTCCATTCTGAACCTTGGCAAAGCGAACAGAGGCAATGTTAAGCTAGTATCACATCTCCGGGACTTCCGTAGGTGGAGGAAACTTCTCGGCAACCTGACGATCAGTGTTCTGGATGAAGCAAATCAATCGGAGTCACTTATTGTACAAAGAAGGAATTCTCAGCTGGGAGGAATTTGTCGTCAAATATTTGATCAGGTTTGGTCCTATTGGGGTACTTTTATGGAGTCTCATGAGCAAATAGGATTCAAGCCTACAGCGTTAGAGCTATTCTTTGGCGTCTTAAGATTTTACATAAACCGTCGTGGAACCACTGCCGTTGGAGACTAA

Protein sequence

MKRALNSGSYIRDETAIEFIISILAFLFPLTHSFFSSPSSDPWPIANILSLFHSSSFGRSILNLGKANRGNVKLVSHLRDFRRWRKLLGNLTISVLDEANQSESLIVQRRNSQLGGICRQIFDQVWSYWGTFMESHEQIGFKPTALELFFGVLRFYINRRGTTAVGD
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc06G05740.2Clc06G05740.2mRNA