Clc06G05100 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G05100
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	major allergen Pru ar 1-like
Location	ClcChr06: 5260552 .. 5261699 (+)
RNA-Seq Expression	Clc06G05100
Synteny	Clc06G05100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCAAAGCCTTTATTACTAATAATTTTTCAAATTATTATTTGTTTTTGCTAAAGTTGCAAGGTTGTGATATAGCAATAATGGGTGTTTACACTTACGAAAACGAGGTGGCCTCCGTGATTCCTCCTGCTAAATTCTTTAAGGCATTCATTCTTGATGCTGACCATCTTTATCCTAAGATTGTGCCAAATCAGCCCCAAACTGAAATTGTCGAAGGAGATGGCGGCCCTGGAACTATCAAGAAGATCACCTTCAATTACGGTAATCTTAAATTACCATCACTAATTTAGGTGTTTATGTCCTTAATTACAACTTTAGTTTAAATTTCTATCATATCTTAATTAACTTTAAAAAGTATTTAGTAGATGTCTTTGACTTTCTATTTTGTGTCAAAGAGCTAAGTTTTTAAACTTTTTAAAATGTCTAGTAAGTTTATTAACTTTTTATTTTGTATCTAATAAGTCATTAAAATTTTAATTTGATGTATCTAATAAGTTATTGACCTATTTGACAAGTTTTAGAAAAGAAAAATCTTAAATTTTATCAACTTGTACTTATATGTATTAATTTTTGCAGGGGGACAAGTGAAAACTATAACACACAGGCTAGACGTAGTGGACGAAGCATCGTTGACGTACAAATATACGGTGTTAGAAGGGGATCTTATTTCAGATACTATTGACCAAATTGTAAAGGAAATAAAAGTAACAGCAGGTCCTGACGGAGGATCCATTTTGAAGAGCACTAGCATTTACCACACCAAAGAAGACAACCAACTCGATCAAGAGAAGCTCAAGAGTGGCGAGGAAAAGGGATTGGCCCTTCTCAAAGCCGCCGAGAGTTACCTGTTGGCCAACCCCGACGAATACAACTAAGAAATTACGAAAATATATATTGAATAAATAAAAATAAAAATATATTTATAAATATATGCATATTTGAGTTTTTATATGTGTTTTGGCTTCAAGGGCTGTGGCCTTTTGAAGTGTTTTAGCCTTCATTTCTAATAAGAGACGTTGGATTGTGTTTGTGGAACTGTGTGGGGTTAATTTGTATGCTTGTGAGTTGTGACTGATTGTATGTTTTCCAAAGGTTAAAAAAATGTTATGTTGTATTGTTGGTTTTAGTAAAATGAATTGCCTAATTATAT

mRNA sequence

TCCAAAGCCTTTATTACTAATAATTTTTCAAATTATTATTTGTTTTTGCTAAAGTTGCAAGGTTGTGATATAGCAATAATGGGTGTTTACACTTACGAAAACGAGGTGGCCTCCGTGATTCCTCCTGCTAAATTCTTTAAGGCATTCATTCTTGATGCTGACCATCTTTATCCTAAGATTGTGCCAAATCAGCCCCAAACTGAAATTGTCGAAGGAGATGGCGGCCCTGGAACTATCAAGAAGATCACCTTCAATTACGGGGGACAAGTGAAAACTATAACACACAGGCTAGACGTAGTGGACGAAGCATCGTTGACGTACAAATATACGGTGTTAGAAGGGGATCTTATTTCAGATACTATTGACCAAATTGTAAAGGAAATAAAAGTAACAGCAGGTCCTGACGGAGGATCCATTTTGAAGAGCACTAGCATTTACCACACCAAAGAAGACAACCAACTCGATCAAGAGAAGCTCAAGAGTGGCGAGGAAAAGGGATTGGCCCTTCTCAAAGCCGCCGAGAGTTACCTGTTGGCCAACCCCGACGAATACAACTAAGAAATTACGAAAATATATATTGAATAAATAAAAATAAAAATATATTTATAAATATATGCATATTTGAGTTTTTATATGTGTTTTGGCTTCAAGGGCTGTGGCCTTTTGAAGTGTTTTAGCCTTCATTTCTAATAAGAGACGTTGGATTGTGTTTGTGGAACTGTGTGGGGTTAATTTGTATGCTTGTGAGTTGTGACTGATTGTATGTTTTCCAAAGGTTAAAAAAATGTTATGTTGTATTGTTGGTTTTAGTAAAATGAATTGCCTAATTATAT

Coding sequence (CDS)

ATGGGTGTTTACACTTACGAAAACGAGGTGGCCTCCGTGATTCCTCCTGCTAAATTCTTTAAGGCATTCATTCTTGATGCTGACCATCTTTATCCTAAGATTGTGCCAAATCAGCCCCAAACTGAAATTGTCGAAGGAGATGGCGGCCCTGGAACTATCAAGAAGATCACCTTCAATTACGGGGGACAAGTGAAAACTATAACACACAGGCTAGACGTAGTGGACGAAGCATCGTTGACGTACAAATATACGGTGTTAGAAGGGGATCTTATTTCAGATACTATTGACCAAATTGTAAAGGAAATAAAAGTAACAGCAGGTCCTGACGGAGGATCCATTTTGAAGAGCACTAGCATTTACCACACCAAAGAAGACAACCAACTCGATCAAGAGAAGCTCAAGAGTGGCGAGGAAAAGGGATTGGCCCTTCTCAAAGCCGCCGAGAGTTACCTGTTGGCCAACCCCGACGAATACAACTAA

Protein sequence

MGVYTYENEVASVIPPAKFFKAFILDADHLYPKIVPNQPQTEIVEGDGGPGTIKKITFNYGGQVKTITHRLDVVDEASLTYKYTVLEGDLISDTIDQIVKEIKVTAGPDGGSILKSTSIYHTKEDNQLDQEKLKSGEEKGLALLKAAESYLLANPDEYN

Homology

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BLAST of Clc06G05100 vs. NCBI nr
Match: XP_038876264.1 (major allergen Pru ar 1-like [Benincasa hispida])

HSP 1 Score: 301.2 bits (770), Expect = 5.2e-78
Identity = 147/159 (92.45%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MGVYTYENEVASVIPPAKFFKAFILDADHLYPKIVPNQPQTEIVEGDGGPGTIKKITFNY 60
           MGV+TYENEVASVIPPAKFFKAFI+DAD+LYPKIVPNQPQTEIVEGDGGPGTIKKITFN+
Sbjct: 1   MGVFTYENEVASVIPPAKFFKAFIIDADNLYPKIVPNQPQTEIVEGDGGPGTIKKITFNH 60

Query: 61  GGQVKTITHRLDVVDEASLTYKYTVLEGDLISDTIDQIVKEIKVTAGPDGGSILKSTSIY 120
           GGQVKTITH+LD+VDEASLTYKYTVLEGDLISDTIDQIVKEIKVTAGPDGGSILKSTS+Y
Sbjct: 61  GGQVKTITHKLDIVDEASLTYKYTVLEGDLISDTIDQIVKEIKVTAGPDGGSILKSTSVY 120

Query: 121 HTKEDNQLDQEKLKSGEEKGLALLKAAESYLLANPDEYN 160
           HTK DNQLD+EKLK GEEKGLAL KAAESYLLANP EYN
Sbjct: 121 HTKGDNQLDEEKLKIGEEKGLALFKAAESYLLANPSEYN 159

[Close]

BLAST of Clc06G05100 vs. NCBI nr
Match: XP_038876313.1 (major allergen Pru ar 1-like [Benincasa hispida])

HSP 1 Score: 300.4 bits (768), Expect = 8.9e-78
Identity = 147/159 (92.45%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MGVYTYENEVASVIPPAKFFKAFILDADHLYPKIVPNQPQTEIVEGDGGPGTIKKITFNY 60
           MGV+TYENEV SVIPPAKFFKAFI+DAD+LYPKIVPNQPQTEIVEG+GGPGTIKKITFN+
Sbjct: 1   MGVFTYENEVVSVIPPAKFFKAFIIDADNLYPKIVPNQPQTEIVEGNGGPGTIKKITFNH 60

Query: 61  GGQVKTITHRLDVVDEASLTYKYTVLEGDLISDTIDQIVKEIKVTAGPDGGSILKSTSIY 120
           GGQVKTITH+LDVVDEASLTYKYTVLEGDLISDTIDQIVKEIKVTAGPDGGSILKSTS+Y
Sbjct: 61  GGQVKTITHKLDVVDEASLTYKYTVLEGDLISDTIDQIVKEIKVTAGPDGGSILKSTSVY 120

Query: 121 HTKEDNQLDQEKLKSGEEKGLALLKAAESYLLANPDEYN 160
           HTKEDNQLD+EKLK GEEKGLAL KAAESYLLANP EYN
Sbjct: 121 HTKEDNQLDEEKLKIGEEKGLALFKAAESYLLANPGEYN 159

[Close]

BLAST of Clc06G05100 vs. NCBI nr
Match: XP_008458391.1 (PREDICTED: major allergen Pru ar 1-like [Cucumis melo] >TYK02932.1 major allergen Pru ar 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 288.5 bits (737), Expect = 3.5e-74
Identity = 141/159 (88.68%), Postives = 151/159 (94.97%), Query Frame = 0


Query: 1   MGVYTYENEVASVIPPAKFFKAFILDADHLYPKIVPNQPQTEIVEGDGGPGTIKKITFNY 60
           MGV+T+ENEV SVIPP KFFKAFILDAD+LYPKI+PNQPQTEIVEGDGG GTIKKITFNY
Sbjct: 1   MGVFTFENEVTSVIPPTKFFKAFILDADNLYPKIIPNQPQTEIVEGDGGAGTIKKITFNY 60

Query: 61  GGQVKTITHRLDVVDEASLTYKYTVLEGDLISDTIDQIVKEIKVTAGPDGGSILKSTSIY 120
           GG++KTI HRLDVVDEASLTYKYTVLEGDLIS+TIDQIVKEIKVT GPDGGSILKSTS+Y
Sbjct: 61  GGELKTIKHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSVY 120

Query: 121 HTKEDNQLDQEKLKSGEEKGLALLKAAESYLLANPDEYN 160
           HTK DNQLD+ KLKSGEEKGLALLKAAE+YLLANP EYN
Sbjct: 121 HTKGDNQLDEGKLKSGEEKGLALLKAAEAYLLANPAEYN 159

[Close]

BLAST of Clc06G05100 vs. NCBI nr
Match: XP_008458392.1 (PREDICTED: major allergen Pru ar 1-like [Cucumis melo] >TYK02931.1 major allergen Pru ar 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 286.6 bits (732), Expect = 1.3e-73
Identity = 140/159 (88.05%), Postives = 151/159 (94.97%), Query Frame = 0


Query: 1   MGVYTYENEVASVIPPAKFFKAFILDADHLYPKIVPNQPQTEIVEGDGGPGTIKKITFNY 60
           MGV+T+ENEV SV+PP KFFKAFIL+AD+LYPKI+PNQPQTEIVEGDGG GTIKKITFNY
Sbjct: 1   MGVFTFENEVTSVVPPTKFFKAFILNADNLYPKIIPNQPQTEIVEGDGGAGTIKKITFNY 60

Query: 61  GGQVKTITHRLDVVDEASLTYKYTVLEGDLISDTIDQIVKEIKVTAGPDGGSILKSTSIY 120
           GG++KTI HRLDVVDEASLTYKYTVLEGDLIS+TIDQIVKEIKVT GPDGGSILKSTSIY
Sbjct: 61  GGELKTIKHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSIY 120

Query: 121 HTKEDNQLDQEKLKSGEEKGLALLKAAESYLLANPDEYN 160
           HTK DNQLD+ KLKSGEEKGLALLKAAE+YLLANP EYN
Sbjct: 121 HTKGDNQLDEGKLKSGEEKGLALLKAAEAYLLANPAEYN 159

[Close]

BLAST of Clc06G05100 vs. NCBI nr
Match: XP_038906608.1 (major allergen Pru ar 1-like [Benincasa hispida])

HSP 1 Score: 280.8 bits (717), Expect = 7.3e-72
Identity = 138/159 (86.79%), Postives = 146/159 (91.82%), Query Frame = 0


Query: 1   MGVYTYENEVASVIPPAKFFKAFILDADHLYPKIVPNQPQTEIVEGDGGPGTIKKITFNY 60
           MGV+TYENEVASVIP  KFFKAFI+DAD+LYPKIVPNQPQTEIVEGDGGPGTIKKITFN+
Sbjct: 1   MGVFTYENEVASVIPLTKFFKAFIIDADNLYPKIVPNQPQTEIVEGDGGPGTIKKITFNH 60

Query: 61  GGQVKTITHRLDVVDEASLTYKYTVLEGDLISDTIDQIVKEIKVTAGPDGGSILKSTSIY 120
           GGQVK I HRLD+VDEASLTYKYTVLEGDLISDTIDQIVKEIKVTAGPDGGSILK+TSIY
Sbjct: 61  GGQVKIIMHRLDIVDEASLTYKYTVLEGDLISDTIDQIVKEIKVTAGPDGGSILKNTSIY 120

Query: 121 HTKEDNQLDQEKLKSGEEKGLALLKAAESYLLANPDEYN 160
           H K DNQLD+EKLK+ EEKGL L K A  YLL NPDEYN
Sbjct: 121 HIKGDNQLDKEKLKTDEEKGLTLFKIAAGYLLTNPDEYN 159

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BLAST of Clc06G05100 vs. ExPASy Swiss-Prot
Match: O50001 (Major allergen Pru ar 1 OS=Prunus armeniaca OX=36596 PE=1 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.5e-48
Identity = 92/160 (57.50%), Postives = 120/160 (75.00%), Query Frame = 0


Query: 1   MGVYTYENEVASVIPPAKFFKAFILDADHLYPKIVPNQPQ-TEIVEGDGGPGTIKKITFN 60
           MGV+TYE E  SVIPP K FKAFILDAD+L PK+ P   + TEI+EGDGG GTIKK+TF 
Sbjct: 1   MGVFTYETEFTSVIPPEKLFKAFILDADNLIPKVAPTAVKGTEILEGDGGVGTIKKVTFG 60

Query: 61  YGGQVKTITHRLDVVDEASLTYKYTVLEGDLISDTIDQIVKEIKVTAGPDGGSILKSTSI 120
            G Q   + HR+D +D+ +L+Y YT++EGD +SD I+ I  +IK+ A PDGGSI+K+TS 
Sbjct: 61  EGSQYAYVKHRVDGIDKDNLSYSYTLIEGDALSDVIENIAYDIKLVASPDGGSIVKTTSH 120

Query: 121 YHTKEDNQLDQEKLKSGEEKGLALLKAAESYLLANPDEYN 160
           YHTK D ++ +E++K+G+EK   L K  E+YLLANPD YN
Sbjct: 121 YHTKGDVEIKEEQVKAGKEKAAGLFKLVEAYLLANPDAYN 160

[Close]

BLAST of Clc06G05100 vs. ExPASy Swiss-Prot
Match: A0A024B3G5 (Major strawberry allergen Fra a 1.06 OS=Fragaria ananassa OX=3747 GN=Fra a 1.06 PE=1 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.6e-45
Identity = 89/159 (55.97%), Postives = 116/159 (72.96%), Query Frame = 0


Query: 1   MGVYTYENEVASVIPPAKFFKAFILDADHLYPKIVPNQPQ-TEIVEGDGGPGTIKKITFN 60
           MGV+TYE E  SVIPP + FKAFILDAD+L PKI P   +  EIVEGDGG GTIKKITF 
Sbjct: 1   MGVFTYETEFTSVIPPPRLFKAFILDADNLIPKIAPQAVKCAEIVEGDGGVGTIKKITFG 60

Query: 61  YGGQVKTITHRLDVVDEASLTYKYTVLEGDLISDTIDQIVKEIKVTAGPDGGSILKSTSI 120
            G Q  ++TH++D +D+ +  Y Y+++EGD +SD I++I  E K+ A  DGGS++KSTS 
Sbjct: 61  EGSQFGSVTHKIDGIDKENFVYSYSLVEGDALSDKIEKISYETKLVASSDGGSVIKSTSN 120

Query: 121 YHTKEDNQLDQEKLKSGEEKGLALLKAAESYLLANPDEY 159
           YHTK D ++ +E +K+G+EK   L K  E YLLANP+EY
Sbjct: 121 YHTKGDVEIKEEHVKAGKEKASHLFKLVEDYLLANPNEY 159

[Close]

BLAST of Clc06G05100 vs. ExPASy Swiss-Prot
Match: A0A024B404 (Major strawberry allergen Fra a 1.05 OS=Fragaria ananassa OX=3747 GN=Fra a 1.05 PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.1e-45
Identity = 89/159 (55.97%), Postives = 116/159 (72.96%), Query Frame = 0


Query: 1   MGVYTYENEVASVIPPAKFFKAFILDADHLYPKIVPNQPQ-TEIVEGDGGPGTIKKITFN 60
           MGV+TYE E  SVIPP + FKAFILDAD+L PKI P   +  EI+EGDGG GTIKKITF 
Sbjct: 1   MGVFTYETEFTSVIPPPRLFKAFILDADNLIPKIAPQAVKCAEIIEGDGGVGTIKKITFG 60

Query: 61  YGGQVKTITHRLDVVDEASLTYKYTVLEGDLISDTIDQIVKEIKVTAGPDGGSILKSTSI 120
            G Q  ++TH++D +D+ +  Y Y+++EGD +SD I++I  E K+ A  DGGSI+KSTS 
Sbjct: 61  EGSQFGSVTHKIDGIDKDNFVYSYSLVEGDALSDKIEKISYETKLVASSDGGSIIKSTSN 120

Query: 121 YHTKEDNQLDQEKLKSGEEKGLALLKAAESYLLANPDEY 159
           YHTK D ++ +E +K+G+EK   L K  E YLLANP+EY
Sbjct: 121 YHTKGDVEIKEEHVKAGKEKASHLFKLVEGYLLANPNEY 159

[Close]

BLAST of Clc06G05100 vs. ExPASy Swiss-Prot
Match: D0E0C6 (Major strawberry allergen Fra a 1-2 OS=Fragaria ananassa OX=3747 GN=FRAA2 PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 2.7e-45
Identity = 88/159 (55.35%), Postives = 116/159 (72.96%), Query Frame = 0


Query: 1   MGVYTYENEVASVIPPAKFFKAFILDADHLYPKIVPNQPQ-TEIVEGDGGPGTIKKITFN 60
           MGV+TYE E  SVIPP + FKAFILDAD+L PKI P   +  EI+EGDGG GTIKKITF 
Sbjct: 1   MGVFTYETEFTSVIPPPRLFKAFILDADNLIPKIAPQAVKCAEIIEGDGGVGTIKKITFG 60

Query: 61  YGGQVKTITHRLDVVDEASLTYKYTVLEGDLISDTIDQIVKEIKVTAGPDGGSILKSTSI 120
            G Q  ++TH++D +D+ +  Y Y+++EGD +SD I++I  E K+ +  DGGSI+KSTS 
Sbjct: 61  EGSQFGSVTHKIDGIDKENFVYSYSLIEGDALSDKIEKISYETKLVSSSDGGSIIKSTSN 120

Query: 121 YHTKEDNQLDQEKLKSGEEKGLALLKAAESYLLANPDEY 159
           YHTK D ++ +E +K+G+EK   L K  E YLLANP+EY
Sbjct: 121 YHTKGDVEIKEEHVKAGKEKASHLFKLVEGYLLANPNEY 159

[Close]

BLAST of Clc06G05100 vs. ExPASy Swiss-Prot
Match: A0A024B3D0 (Major strawberry allergen Fra a 1.04 OS=Fragaria ananassa OX=3747 GN=Fra a 1.04 PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 2.7e-45
Identity = 88/159 (55.35%), Postives = 116/159 (72.96%), Query Frame = 0


Query: 1   MGVYTYENEVASVIPPAKFFKAFILDADHLYPKIVPNQPQ-TEIVEGDGGPGTIKKITFN 60
           MGV+TYE E  SVIPP + FKAFILDAD+L PKI P   +  EI+EGDGG GTIKKITF 
Sbjct: 1   MGVFTYETEFTSVIPPPRLFKAFILDADNLIPKIAPQAVKCAEIIEGDGGVGTIKKITFG 60

Query: 61  YGGQVKTITHRLDVVDEASLTYKYTVLEGDLISDTIDQIVKEIKVTAGPDGGSILKSTSI 120
            G Q  ++TH++D +D+ +  Y Y+++EGD +SD I++I  E K+ A  DGGS++KSTS 
Sbjct: 61  EGSQFGSVTHKIDGIDKDNFAYSYSLVEGDALSDKIEKISYETKLVASSDGGSVIKSTSN 120

Query: 121 YHTKEDNQLDQEKLKSGEEKGLALLKAAESYLLANPDEY 159
           YHTK D ++ +E +K+G+EK   L K  E YLLANP+EY
Sbjct: 121 YHTKGDVEIKEEHVKAGKEKASHLFKLVEDYLLANPNEY 159

[Close]

BLAST of Clc06G05100 vs. ExPASy TrEMBL
Match: A0A5D3BVU0 (Major allergen Pru ar 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00120 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.7e-74
Identity = 141/159 (88.68%), Postives = 151/159 (94.97%), Query Frame = 0


Query: 1   MGVYTYENEVASVIPPAKFFKAFILDADHLYPKIVPNQPQTEIVEGDGGPGTIKKITFNY 60
           MGV+T+ENEV SVIPP KFFKAFILDAD+LYPKI+PNQPQTEIVEGDGG GTIKKITFNY
Sbjct: 1   MGVFTFENEVTSVIPPTKFFKAFILDADNLYPKIIPNQPQTEIVEGDGGAGTIKKITFNY 60

Query: 61  GGQVKTITHRLDVVDEASLTYKYTVLEGDLISDTIDQIVKEIKVTAGPDGGSILKSTSIY 120
           GG++KTI HRLDVVDEASLTYKYTVLEGDLIS+TIDQIVKEIKVT GPDGGSILKSTS+Y
Sbjct: 61  GGELKTIKHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSVY 120

Query: 121 HTKEDNQLDQEKLKSGEEKGLALLKAAESYLLANPDEYN 160
           HTK DNQLD+ KLKSGEEKGLALLKAAE+YLLANP EYN
Sbjct: 121 HTKGDNQLDEGKLKSGEEKGLALLKAAEAYLLANPAEYN 159

[Close]

BLAST of Clc06G05100 vs. ExPASy TrEMBL
Match: A0A1S3C906 (major allergen Pru ar 1-like OS=Cucumis melo OX=3656 GN=LOC103497814 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.7e-74
Identity = 141/159 (88.68%), Postives = 151/159 (94.97%), Query Frame = 0


Query: 1   MGVYTYENEVASVIPPAKFFKAFILDADHLYPKIVPNQPQTEIVEGDGGPGTIKKITFNY 60
           MGV+T+ENEV SVIPP KFFKAFILDAD+LYPKI+PNQPQTEIVEGDGG GTIKKITFNY
Sbjct: 1   MGVFTFENEVTSVIPPTKFFKAFILDADNLYPKIIPNQPQTEIVEGDGGAGTIKKITFNY 60

Query: 61  GGQVKTITHRLDVVDEASLTYKYTVLEGDLISDTIDQIVKEIKVTAGPDGGSILKSTSIY 120
           GG++KTI HRLDVVDEASLTYKYTVLEGDLIS+TIDQIVKEIKVT GPDGGSILKSTS+Y
Sbjct: 61  GGELKTIKHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSVY 120

Query: 121 HTKEDNQLDQEKLKSGEEKGLALLKAAESYLLANPDEYN 160
           HTK DNQLD+ KLKSGEEKGLALLKAAE+YLLANP EYN
Sbjct: 121 HTKGDNQLDEGKLKSGEEKGLALLKAAEAYLLANPAEYN 159

[Close]

BLAST of Clc06G05100 vs. ExPASy TrEMBL
Match: A0A5D3BT68 (Major allergen Pru ar 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00110 PE=3 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 6.5e-74
Identity = 140/159 (88.05%), Postives = 151/159 (94.97%), Query Frame = 0


Query: 1   MGVYTYENEVASVIPPAKFFKAFILDADHLYPKIVPNQPQTEIVEGDGGPGTIKKITFNY 60
           MGV+T+ENEV SV+PP KFFKAFIL+AD+LYPKI+PNQPQTEIVEGDGG GTIKKITFNY
Sbjct: 1   MGVFTFENEVTSVVPPTKFFKAFILNADNLYPKIIPNQPQTEIVEGDGGAGTIKKITFNY 60

Query: 61  GGQVKTITHRLDVVDEASLTYKYTVLEGDLISDTIDQIVKEIKVTAGPDGGSILKSTSIY 120
           GG++KTI HRLDVVDEASLTYKYTVLEGDLIS+TIDQIVKEIKVT GPDGGSILKSTSIY
Sbjct: 61  GGELKTIKHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSIY 120

Query: 121 HTKEDNQLDQEKLKSGEEKGLALLKAAESYLLANPDEYN 160
           HTK DNQLD+ KLKSGEEKGLALLKAAE+YLLANP EYN
Sbjct: 121 HTKGDNQLDEGKLKSGEEKGLALLKAAEAYLLANPAEYN 159

[Close]

BLAST of Clc06G05100 vs. ExPASy TrEMBL
Match: A0A1S3C7A2 (major allergen Pru ar 1-like OS=Cucumis melo OX=3656 GN=LOC103497815 PE=3 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 6.5e-74
Identity = 140/159 (88.05%), Postives = 151/159 (94.97%), Query Frame = 0


Query: 1   MGVYTYENEVASVIPPAKFFKAFILDADHLYPKIVPNQPQTEIVEGDGGPGTIKKITFNY 60
           MGV+T+ENEV SV+PP KFFKAFIL+AD+LYPKI+PNQPQTEIVEGDGG GTIKKITFNY
Sbjct: 1   MGVFTFENEVTSVVPPTKFFKAFILNADNLYPKIIPNQPQTEIVEGDGGAGTIKKITFNY 60

Query: 61  GGQVKTITHRLDVVDEASLTYKYTVLEGDLISDTIDQIVKEIKVTAGPDGGSILKSTSIY 120
           GG++KTI HRLDVVDEASLTYKYTVLEGDLIS+TIDQIVKEIKVT GPDGGSILKSTSIY
Sbjct: 61  GGELKTIKHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSIY 120

Query: 121 HTKEDNQLDQEKLKSGEEKGLALLKAAESYLLANPDEYN 160
           HTK DNQLD+ KLKSGEEKGLALLKAAE+YLLANP EYN
Sbjct: 121 HTKGDNQLDEGKLKSGEEKGLALLKAAEAYLLANPAEYN 159

[Close]

BLAST of Clc06G05100 vs. ExPASy TrEMBL
Match: A0A0A0KD04 (Bet_v_1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G313090 PE=3 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 3.9e-71
Identity = 135/159 (84.91%), Postives = 149/159 (93.71%), Query Frame = 0


Query: 1   MGVYTYENEVASVIPPAKFFKAFILDADHLYPKIVPNQPQTEIVEGDGGPGTIKKITFNY 60
           MGV+TYENEV SV+PPAK FKAFILDAD+LY KI+P+ PQTEIVEG+GGPGTIKKITF++
Sbjct: 1   MGVFTYENEVTSVVPPAKLFKAFILDADNLYSKIIPSHPQTEIVEGNGGPGTIKKITFSH 60

Query: 61  GGQVKTITHRLDVVDEASLTYKYTVLEGDLISDTIDQIVKEIKVTAGPDGGSILKSTSIY 120
           GG++KTI HRLDVVDEASLTYKYTVLEGDLIS+TIDQIVKEIKVT GPDGGSILKSTS+Y
Sbjct: 61  GGELKTIAHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSVY 120

Query: 121 HTKEDNQLDQEKLKSGEEKGLALLKAAESYLLANPDEYN 160
           HTK DNQLD+ KLK GEEKGLALLKAAE+YLLANP EYN
Sbjct: 121 HTKGDNQLDEGKLKIGEEKGLALLKAAEAYLLANPAEYN 159

The following BLAST results are available for this feature:

BLAST of Clc06G05100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876264.1	5.2e-78	92.45	major allergen Pru ar 1-like [Benincasa hispida]	[more]
XP_038876313.1	8.9e-78	92.45	major allergen Pru ar 1-like [Benincasa hispida]	[more]
XP_008458391.1	3.5e-74	88.68	PREDICTED: major allergen Pru ar 1-like [Cucumis melo] >TYK02932.1 major allerge...	[more]
XP_008458392.1	1.3e-73	88.05	PREDICTED: major allergen Pru ar 1-like [Cucumis melo] >TYK02931.1 major allerge...	[more]
XP_038906608.1	7.3e-72	86.79	major allergen Pru ar 1-like [Benincasa hispida]	[more]

BLAST of Clc06G05100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O50001	1.5e-48	57.50	Major allergen Pru ar 1 OS=Prunus armeniaca OX=36596 PE=1 SV=1	[more]
A0A024B3G5	1.6e-45	55.97	Major strawberry allergen Fra a 1.06 OS=Fragaria ananassa OX=3747 GN=Fra a 1.06 ...	[more]
A0A024B404	2.1e-45	55.97	Major strawberry allergen Fra a 1.05 OS=Fragaria ananassa OX=3747 GN=Fra a 1.05 ...	[more]
D0E0C6	2.7e-45	55.35	Major strawberry allergen Fra a 1-2 OS=Fragaria ananassa OX=3747 GN=FRAA2 PE=1 S...	[more]
A0A024B3D0	2.7e-45	55.35	Major strawberry allergen Fra a 1.04 OS=Fragaria ananassa OX=3747 GN=Fra a 1.04 ...	[more]

BLAST of Clc06G05100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BVU0	1.7e-74	88.68	Major allergen Pru ar 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3C906	1.7e-74	88.68	major allergen Pru ar 1-like OS=Cucumis melo OX=3656 GN=LOC103497814 PE=3 SV=1	[more]
A0A5D3BT68	6.5e-74	88.05	Major allergen Pru ar 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3C7A2	6.5e-74	88.05	major allergen Pru ar 1-like OS=Cucumis melo OX=3656 GN=LOC103497815 PE=3 SV=1	[more]
A0A0A0KD04	3.9e-71	84.91	Bet_v_1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G313090 PE=...	[more]

BLAST of Clc06G05100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024949	Bet v I type allergen	PRINTS	PR00634	BETALLERGEN	coord: 143..153 score: 70.5 coord: 65..84 score: 37.34 coord: 109..125 score: 60.7 coord: 84..97 score: 32.6 coord: 49..58 score: 83.83 coord: 3..23 score: 50.61 coord: 26..36 score: 53.0
IPR000916	Bet v I/Major latex protein	SMART	SM01037	Bet_v_1_2	coord: 1..154 e-value: 0.0012 score: 0.4
IPR000916	Bet v I/Major latex protein	PFAM	PF00407	Bet_v_1	coord: 1..154 e-value: 3.7E-27 score: 95.1
IPR023393	START-like domain superfamily	GENE3D	3.30.530.20		coord: 2..158 e-value: 7.6E-55 score: 187.2
None	No IPR available	PANTHER	PTHR31213	FAMILY NOT NAMED	coord: 1..159
None	No IPR available	PANTHER	PTHR31213:SF17	PR-10 TYPE PATHOGENESIS-RELATED PROTEIN-RELATED	coord: 1..159
None	No IPR available	CDD	cd07816	Bet_v1-like	coord: 5..151 e-value: 8.81578E-55 score: 167.752
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 2..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G05100.1	Clc06G05100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009738	abscisic acid-activated signaling pathway
biological_process	GO:0006952	defense response
biological_process	GO:0043086	negative regulation of catalytic activity
biological_process	GO:0080163	regulation of protein serine/threonine phosphatase activity
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0010427	abscisic acid binding
molecular_function	GO:0004864	protein phosphatase inhibitor activity
molecular_function	GO:0038023	signaling receptor activity