Clc06G03860 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G03860
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	AT-rich interactive domain-containing protein 1-like
Location	ClcChr06: 4084742 .. 4090836 (+)
RNA-Seq Expression	Clc06G03860
Synteny	Clc06G03860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAGAAAAAAGAAAAAAGAAAAGAAAAGGGCCAAATGAGAGAGAGAAACAACAAGTCTTGAGAGAGGGACCAACCAAAGCCAGAACTAGTCAAGCTTTAAAGGATGTGTTGGGCGGTAGAGTAGTAGACACAGTTTGCGTAGAAAACGCTTCCTTCCAAAACAAAAACAAAAATTATTAACAGGTACGTTTTCTCTCTTCCAATCAACATTAAAAATGGCGGTATATTCTTTATTTTTGGTGTATTGGGTCTCTGTATTTCTTCATATACTTTGAATTCTAGCCTCTCATGGTCAAGGGGGCATTTCATCTTCGCTTTTTGTCCCTCTCTCTCTCTCTCTTTTGTATAATGACATTTCAATATATCTGCAAATATGACGCCAATGGCGGGATGGATGGATATTTAACTTTTTTCATTTCAAAAACAAACCCTAGATCAATCTTGTTTTCCCGCCAAAACACTGATCATCGAACCCAATTGATGATAGTCAATGTGTGGTGAACAAGTGGTTGCTCTTTTCATCCACCTGATTTGTGTTATGTCTTTTCGTGTTCTCGAAATTATATGACCTGGGGTTTTTGTATTTTTGTTTTTTGTTTTGGAAATTATATGACCAGGGTGATTGCATTTGATTTTTAGGGTTTGAATTCCAATTTATGGCAGGGATGTTGGGTGATAGCTGATGTGTCTGAGTTAGATTACGAAGGTGCTGCGAAGTAGATTGAACGAAATGGGTATTTCTTAGATTTTGGATTCAGTTTAATAGGTTGTAGTGTTGAAGATCTGTTTGATATCCTTTTCGAAAGCTTGGTTGGGTTTTTCTTCTTCTGTACCACATCCACGCTGCTTGTTCTTTATTTCTTCGTCGATTTGGCAAAGGACATTGTGAGTCTGACAGATAAAGTGTGAGGTTGTTCGAATTGGCTGTGTAAGAATCTTGATCGGAAATGAATGTTCTTCTGTTTTGAAGTTACGTTAAATCAAGTATTTGGATTCAGAGAGTTGGAGGAAGTTGTGTGAAAAAGAGACTCTGTAGTTTGAACTTTGGATGTTACAAGACAAGAATTGAAAGAAGTCTGCTGAGTTCAGAAAACTCAGTCGGAGATTCTCGATTAGAAGAAGGAAGCTGAGTTATCTTAACATCTAGGTTTGTCTTGCGTGCTGTAGTGCTTGGATGGTGGGGCAGGAATGGAGCTAGCAACTAGGAATTGCTGTATGAAAATTTAGCAAAAGGATCGGTAGTATCTCGTAATGGCTGAGAGTTGGGTTGAAACCAAAAGAAAACGGGAGTCATGTTGTCAGATGAGTTCATGAATTGTGTTGCCTTTGACAAGACTTCGATTTCAGATTTTTCCAAGAGAATAATCGATATGAAGAGTGATAGAATGAAGAGCGGGGATGTATTTCCTCGCAGAAGCAAGAAACTCAAGGATATTGATAATTGCAACATCGAAAATGAGGATATAAAAATTATTGATCCACCTTTCATCAAGGAAACAAATGTTGTCCAGGAGAGGAAGCAGGAACCGATGTTAGGATTGCTTGATTGGCTTAAAGGTATTGCAAGAAGCCCTTGTGATCCCTCAATATGTTCATTACCAGAAAAGTCAAAATGGAAATCATATGGAAATGAAGAGATTTGGAAACAAATTCTGCTGGTTCGAGAGGAAATGTTTGTGAAAAGACAAGTTGACTCAAGTAGTGAACAATCTTTTGTGCAGGTACTTTACATAAATGCTCAAGTTGTTTGTGTTTATATACCCATTTAAAATTGTTGATTCGCATGACACGGAAATTAAAAAAAAAAAAAAAAACTGTCTATATCTGTCTGTGCATCTATGAAGTTTTTCTCGTCATAAAGCTGATTGTGGTAGTTTTTAGGCTGCTTTAGTCTTTTATTGTTTTTCATATTATTTGTCCATCTTGAAATGATTTTCATACTATGCATTTTGATTAGTATATATTTACATCTTAAATAATGTTCTGGTCATTGTAAACTGAAGATACTCATTGTGAAAGCCAATATGGAGCTGACTTAATCTTAGAATGTATCATTGAATTACTGCAGTATTTTTTTTTCTTTTTTTTTTTTTTTTAACTTTTTTTTTTTATCTGATCTATAGTATCTATCATGTTAGTTGTTAATGTTATGAGCCTCTTTAGTTTTTAGGAAATTCTGCAGTGTCCTTTCTTTATGTTGTTTTTATTTTGGATAAGAGTCTTCATGTTATTTTTATGCTTCCATGACCTTTGTGTGTATATGAAACTAAAGAATCCTTCTTATCAATTCTGAATATTATTTGTCTTCTTAAGAAGATACTTGGAGTATTAGCTGTTTAAACTTGTGGTTCCTTTATTAGGAAGAATATTAGACTATTTAAGACATCGATTTCATTTAGCCTGGTTCTGTTGTGGCCAATAGCTTGAAGCTTCAGCCGCTATTTTTTTAATTTTTGATCTGCTTGTAGTCACTAGTCAGAGTGTGTTTGAAAATGTTCTTAAAAGTCTCGAAGTGACTTGAGAGCATTTTTTTAGGTTGGGTGATTATAGATTCATGAATGAGTTTGGTATCCTGATAGGAAGTACATTACTAAAACACCAAGCAAAAAACATCATTATTTTAGAATTATTTTACCCTAGGAAATGTAGAATAGTAGCTACAATGTGATATTTACTAATTGTTAAGATTTTATCAGCTATCCAAAATTGTAAAGTTAACCCAAAAGGGCATACATCATCTGCATTGAAGGAATATCAACCCCCATACTAACCTAGTGAGTTAGTATTTCTTTAATTAAAAAAAAATCTTTTATTTCATCTTAAACACGATTACTTGTTGAAATTAGTACCTCAAAATTTAATTAGAAAATTTTCCATAAAGCAACTAATAAATTATTGGTTATGTCCAAATTTGGTCCTATGGTTTGGGGAAAGTTAGAATTAGTTTTTGTGGTTTTAAAATTTAATTTTTTTTATGGTTTGATAGAACCTCATAAATAGTATTTATGGTTTGATAAAACCTCATAAATAGTTTTTATGGTTTGGTTTGATAACACCTCATAAATTGTCTTTATGGTTTGATAAACCTCATAAATAGTCTTTATTGTTTGACGAAATTCAAGGACTATTTATGAGAGTTTTATCCAACTATAGGGACAGATTCTAACCTTTAAACCATAGAGACTAAAATTTTACTTTTTTCCAATTCATAGGTACCAAATTTATAATTTGGCCTAAATTACATAAAATTCAACCTAACAAGTAAACAATCATAGGGAAAAATTCTTACCTTTAAACCATAGAGACTAAAATTTAACCTTCTCCAAACTATAGGGACCAAATTATATAAAAACCAGAATTCCAATTTTTTCTTTGGTGCCTTAAGCACAAGAAATTATTTTGTAATTATAGCCTAGGTCAAATTCTCCATAATTGGGTGGCGGTGCTTCATTAGTTTCTGTTGGTAGAAAGGTTGCTCACCCCTCCCCTAGGTGTCTCTTTTTGTTTGCTTAATATATTATTCAGTTTCTTTAAATAAAATAAAATAAAATAAAATAAATAAAATTTAATCTAGACTACAAAATATTTCTATCCAACCATTAAAACATCTAAATCTAGCATCAAAATTGAGCGGATTTAAAAGCACCCAAAACTCAGTTAAATAGCAACCTAACGTAATAACGAAAACTAATAACAACTAAAAATAGTCTCTTTCAATCATAGGAGGTATAAAAACCATTAAAGAAAAATTAATCATTTTGGTCATTTTATCTTTCTAAATTTTATCCTTTCTTAATTTGATTCCAACCATTGAAGAACTCGAGATTCAAATTTTGGAGAATGTTTTTCATGAACCTTGCAATTGAAAACGTGTCATATTTTACCATAAATCATATATTGATGATTAAGGCCCTAGTTGGTAACCATTTGGTTCTTTATTTTTAGTTTTTAAAAATTAAGCTTGTAAACACCTCATCTACCTCTAAATTGTTTGTTTTGTTATCTACTTTTTATCATTGTTAAGTTTTGAACACTAAAAAAATAGTTTTTGGAATTTGGCTAAAAATTCAACCCTTGTACTTAAGAAAGATGCAAACTGTTATAGGAAATTGAGAGAAAATAGGCTTATTTTTCAAAAACTAAAAATAGAAAACCAAATGGTTGTCAAACGGGGCCTAAATCATTATATTTTACCCTGCTCTATTTTTATTTTTGAACCAAGAATTTTTCTTTTTCCTGGTTAATTTTGGCAATGTGTTTTACTTAAATCTTAGGCTATATTTCTAGTCCTAAGGCTAAATTTGATACCTGTACTATAAAATACAAATACATTTAGTGTCATATGAGAGGTGTATTACATCATAGAAATAAAATAACGATAAAGAAAGATAGTTATGTAAAGTCTTTGGACCAAAACAAAATATTTGACAACAAGATAACCAAAGCAAATGATTGTGGAATATTAGGGACCAAAATAAGATTTATATTAGCTCCTTTATTGATGTTAAGTTTAAATGATTTCTTACTGCATTAGTATGTTTGAATTTTTTTCGTACTGTGTATAGAAGCGAATTAAATTCAAAGGAAAGGAAGAATAAATGAAACAAAAAGTTAATATTTCTATATAGGAAATTTTGACTAATGGTAAATGTATATATTTTTTTCTTTAAAAAAAAAAGGATTGAACAGATCTAAACAACATAATGAACAGATTATTATTTTTCCATCTACTTATTCTCCTTCCTAGCTGACCACATCATTTCTATTACTTTAGCTTGAAAGTTTTAGCTTAATTATCATCTGGTTCACTTCATCTTCCCTATTTGCAGAGAAATCAGAGGATGCATCCTTGTATGTACGATGACGATACAGTTCCGATTTACAATCTTAGGAAGAGATTAAGCTTTGACAAGAAGGACCTTTCTCAAGAACCTGTTTCAAAAACAAGTGATTCCTCACCTACAGATTCATCAGATGATTACAAGCCCGTTCCTTTGGGGTCAGATTATCAAGCTCAAGTACCAGAATGGAATGGTGTAATATCCGAGAGTGATTTAAAGTGGTTGGGAACTCAAGAATGGCCCTTGAAGAAAGGAAGGAACAGATATCTAGTCGAAAGGGATCCCATTGGAAAAGGAAGGCGAGATCCTTGTGGGTGCTTGGACGCCAATTCGGTTGCCTGTGTCAAATTTCACGTTGCTGAGAAAAGGCATAGATTGAAACTTGAGTTGGGCGACGCATTCCTCCATTGGAGATTTGATAAGATGGGGGAAGATGTTACATTTGCTTGGACAGTGGAGGATGAGAAAAAATTTGAGGACATAGTGTCGTCGAACCCTCCGTCCCTCGGGATATCTTATTGGGATGATATCATCGAGTCATTTCCTTCTAGGAGCAAGGCAGATCTTGTTAGCTACTACTATAATGTCTTTCTTTTGCGTCGTAGAGGACACCAAAATCGGGTTACGCCAGATGAAATTGATAGTGACGAGGAATCAGATTCGGGAATTGCAACCAATGGATATGGAAACGAAGTGCATAATTCATCTGGCTCCATTTTCTATTCTCCTAAGAAGCCACGATAAGCTTGAGGTATCGCTAGAAAACAGATTTTGACAGAGTACCAATGTTGATAATGTTGATTCTGATTTGGAATCTGCATTTTTTTATTAATGATTTTTGTCAAGTTGGAAATGGAAAAATTCTTTTGTGACGTTACATGGAAAGCTGCAGTTGTAGCCTATGCAAAATAGAAGCTAAGGGGACGAAGGCGTCATGGATTACCAAGTCATTGTTACGAAAACGGGCTGAATTCGGAGGCTCGAGCAATTTTGGTTTTGGGTTATGTTGTTCGGTTTGGATCAAATTGAAGGGTTTGTGAATTGTTTTGCTAGATTTTGTCCTAGAAATGAGAAGGATCTTGGTCGCAAGGCTCTCTTAAACAAGGCAAATAGATTTAGTTCTGAAGGGGAATGCTATTTTGTTCATTCCAAAAGTTTCATCTTTGTATATTTGCTCGCTGATGTTGACATGTGAAAAAACGTACAAGCATGACCCTTTAAAAAAAGATTAAAATCACACTTTAAATTC

mRNA sequence

AAAAAAAAGAAAAAAGAAAAAAGAAAAGAAAAGGGCCAAATGAGAGAGAGAAACAACAAGTCTTGAGAGAGGGACCAACCAAAGCCAGAACTAGTCAAGCTTTAAAGGATGTGTTGGGCGGTAGAGTAGTAGACACAGTTTGCGTAGAAAACGCTTCCTTCCAAAACAAAAACAAAAATTATTAACAGGGATGTTGGGTGATAGCTGATGTGTCTGAGTTAGATTACGAAGGTGCTGCGAAGTAGATTGAACGAAATGGGTATTTCTTAGATTTTGGATTCAGTTTAATAGGTTGTAGTGTTGAAGATCTGTTTGATATCCTTTTCGAAAGCTTGGTTGGGTTTTTCTTCTTCTGTACCACATCCACGCTGCTTGTTCTTTATTTCTTCGTCGATTTGGCAAAGGACATTGTGAGTCTGACAGATAAAGTGTGAGGTTGTTCGAATTGGCTGTGTAAGAATCTTGATCGGAAATGAATGTTCTTCTGTTTTGAAGTTACGTTAAATCAAGTATTTGGATTCAGAGAGTTGGAGGAAGTTGTGTGAAAAAGAGACTCTGTAGTTTGAACTTTGGATGTTACAAGACAAGAATTGAAAGAAGTCTGCTGAGTTCAGAAAACTCAGTCGGAGATTCTCGATTAGAAGAAGGAAGCTGAGTTATCTTAACATCTAGGTTTGTCTTGCGTGCTGTAGTGCTTGGATGGTGGGGCAGGAATGGAGCTAGCAACTAGGAATTGCTGTATGAAAATTTAGCAAAAGGATCGGTAGTATCTCGTAATGGCTGAGAGTTGGGTTGAAACCAAAAGAAAACGGGAGTCATGTTGTCAGATGAGTTCATGAATTGTGTTGCCTTTGACAAGACTTCGATTTCAGATTTTTCCAAGAGAATAATCGATATGAAGAGTGATAGAATGAAGAGCGGGGATGTATTTCCTCGCAGAAGCAAGAAACTCAAGGATATTGATAATTGCAACATCGAAAATGAGGATATAAAAATTATTGATCCACCTTTCATCAAGGAAACAAATGTTGTCCAGGAGAGGAAGCAGGAACCGATGTTAGGATTGCTTGATTGGCTTAAAGGTATTGCAAGAAGCCCTTGTGATCCCTCAATATGTTCATTACCAGAAAAGTCAAAATGGAAATCATATGGAAATGAAGAGATTTGGAAACAAATTCTGCTGGTTCGAGAGGAAATGTTTGTGAAAAGACAAGTTGACTCAAGTAGTGAACAATCTTTTGTGCAGAGAAATCAGAGGATGCATCCTTGTATGTACGATGACGATACAGTTCCGATTTACAATCTTAGGAAGAGATTAAGCTTTGACAAGAAGGACCTTTCTCAAGAACCTGTTTCAAAAACAAGTGATTCCTCACCTACAGATTCATCAGATGATTACAAGCCCGTTCCTTTGGGGTCAGATTATCAAGCTCAAGTACCAGAATGGAATGGTGTAATATCCGAGAGTGATTTAAAGTGGTTGGGAACTCAAGAATGGCCCTTGAAGAAAGGAAGGAACAGATATCTAGTCGAAAGGGATCCCATTGGAAAAGGAAGGCGAGATCCTTGTGGGTGCTTGGACGCCAATTCGGTTGCCTGTGTCAAATTTCACGTTGCTGAGAAAAGGCATAGATTGAAACTTGAGTTGGGCGACGCATTCCTCCATTGGAGATTTGATAAGATGGGGGAAGATGTTACATTTGCTTGGACAGTGGAGGATGAGAAAAAATTTGAGGACATAGTGTCGTCGAACCCTCCGTCCCTCGGGATATCTTATTGGGATGATATCATCGAGTCATTTCCTTCTAGGAGCAAGGCAGATCTTGTTAGCTACTACTATAATGTCTTTCTTTTGCGTCGTAGAGGACACCAAAATCGGGTTACGCCAGATGAAATTGATAGTGACGAGGAATCAGATTCGGGAATTGCAACCAATGGATATGGAAACGAAGTGCATAATTCATCTGGCTCCATTTTCTATTCTCCTAAGAAGCCACGATAAGCTTGAGGTATCGCTAGAAAACAGATTTTGACAGAGTACCAATGTTGATAATGTTGATTCTGATTTGGAATCTGCATTTTTTTATTAATGATTTTTGTCAAGTTGGAAATGGAAAAATTCTTTTGTGACGTTACATGGAAAGCTGCAGTTGTAGCCTATGCAAAATAGAAGCTAAGGGGACGAAGGCGTCATGGATTACCAAGTCATTGTTACGAAAACGGGCTGAATTCGGAGGCTCGAGCAATTTTGGTTTTGGGTTATGTTGTTCGGTTTGGATCAAATTGAAGGGTTTGTGAATTGTTTTGCTAGATTTTGTCCTAGAAATGAGAAGGATCTTGGTCGCAAGGCTCTCTTAAACAAGGCAAATAGATTTAGTTCTGAAGGGGAATGCTATTTTGTTCATTCCAAAAGTTTCATCTTTGTATATTTGCTCGCTGATGTTGACATGTGAAAAAACGTACAAGCATGACCCTTTAAAAAAAGATTAAAATCACACTTTAAATTC

Coding sequence (CDS)

ATGTTGTCAGATGAGTTCATGAATTGTGTTGCCTTTGACAAGACTTCGATTTCAGATTTTTCCAAGAGAATAATCGATATGAAGAGTGATAGAATGAAGAGCGGGGATGTATTTCCTCGCAGAAGCAAGAAACTCAAGGATATTGATAATTGCAACATCGAAAATGAGGATATAAAAATTATTGATCCACCTTTCATCAAGGAAACAAATGTTGTCCAGGAGAGGAAGCAGGAACCGATGTTAGGATTGCTTGATTGGCTTAAAGGTATTGCAAGAAGCCCTTGTGATCCCTCAATATGTTCATTACCAGAAAAGTCAAAATGGAAATCATATGGAAATGAAGAGATTTGGAAACAAATTCTGCTGGTTCGAGAGGAAATGTTTGTGAAAAGACAAGTTGACTCAAGTAGTGAACAATCTTTTGTGCAGAGAAATCAGAGGATGCATCCTTGTATGTACGATGACGATACAGTTCCGATTTACAATCTTAGGAAGAGATTAAGCTTTGACAAGAAGGACCTTTCTCAAGAACCTGTTTCAAAAACAAGTGATTCCTCACCTACAGATTCATCAGATGATTACAAGCCCGTTCCTTTGGGGTCAGATTATCAAGCTCAAGTACCAGAATGGAATGGTGTAATATCCGAGAGTGATTTAAAGTGGTTGGGAACTCAAGAATGGCCCTTGAAGAAAGGAAGGAACAGATATCTAGTCGAAAGGGATCCCATTGGAAAAGGAAGGCGAGATCCTTGTGGGTGCTTGGACGCCAATTCGGTTGCCTGTGTCAAATTTCACGTTGCTGAGAAAAGGCATAGATTGAAACTTGAGTTGGGCGACGCATTCCTCCATTGGAGATTTGATAAGATGGGGGAAGATGTTACATTTGCTTGGACAGTGGAGGATGAGAAAAAATTTGAGGACATAGTGTCGTCGAACCCTCCGTCCCTCGGGATATCTTATTGGGATGATATCATCGAGTCATTTCCTTCTAGGAGCAAGGCAGATCTTGTTAGCTACTACTATAATGTCTTTCTTTTGCGTCGTAGAGGACACCAAAATCGGGTTACGCCAGATGAAATTGATAGTGACGAGGAATCAGATTCGGGAATTGCAACCAATGGATATGGAAACGAAGTGCATAATTCATCTGGCTCCATTTTCTATTCTCCTAAGAAGCCACGATAA

Protein sequence

MLSDEFMNCVAFDKTSISDFSKRIIDMKSDRMKSGDVFPRRSKKLKDIDNCNIENEDIKIIDPPFIKETNVVQERKQEPMLGLLDWLKGIARSPCDPSICSLPEKSKWKSYGNEEIWKQILLVREEMFVKRQVDSSSEQSFVQRNQRMHPCMYDDDTVPIYNLRKRLSFDKKDLSQEPVSKTSDSSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPLKKGRNRYLVERDPIGKGRRDPCGCLDANSVACVKFHVAEKRHRLKLELGDAFLHWRFDKMGEDVTFAWTVEDEKKFEDIVSSNPPSLGISYWDDIIESFPSRSKADLVSYYYNVFLLRRRGHQNRVTPDEIDSDEESDSGIATNGYGNEVHNSSGSIFYSPKKPR

Homology

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BLAST of Clc06G03860 vs. NCBI nr
Match: XP_038875899.1 (AT-rich interactive domain-containing protein 1-like [Benincasa hispida])

HSP 1 Score: 771.5 bits (1991), Expect = 3.4e-219
Identity = 371/394 (94.16%), Postives = 383/394 (97.21%), Query Frame = 0


Query: 1   MLSDEFMNCVAFDKTSISDFSKRIIDMKSDRMKSGDVFPRRSKKLKDIDNCNIENEDIKI 60
           MLSDEFMNCV+FD+ SISDFSKRI++MKSDRMKSGDVFPRRSKKLKDID+CN ENEDIKI
Sbjct: 1   MLSDEFMNCVSFDENSISDFSKRILNMKSDRMKSGDVFPRRSKKLKDIDHCNTENEDIKI 60

Query: 61  IDPPFIKETNVVQERKQEPMLGLLDWLKGIARSPCDPSICSLPEKSKWKSYGNEEIWKQI 120
           IDPPFIKETNV QE KQEPMLGLLDWLKGIAR+PCDPSICSLPEKSKWKSYG EEIWKQ+
Sbjct: 61  IDPPFIKETNVAQESKQEPMLGLLDWLKGIARNPCDPSICSLPEKSKWKSYGKEEIWKQV 120

Query: 121 LLVREEMFVKRQVDSSSEQSFVQRNQRMHPCMYDDDTVPIYNLRKRLSFDKKDLSQEPVS 180
           LLVREEMFVKRQVDSSSEQSFVQRNQRMHPCMYDDDTVPIYNLRKRLSFDKKDLSQEPVS
Sbjct: 121 LLVREEMFVKRQVDSSSEQSFVQRNQRMHPCMYDDDTVPIYNLRKRLSFDKKDLSQEPVS 180

Query: 181 KTSDSSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPLKKGRNRYLVER 240
           K SDSSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPLK+GR+RYLVER
Sbjct: 181 KISDSSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPLKRGRHRYLVER 240

Query: 241 DPIGKGRRDPCGCLDANSVACVKFHVAEKRHRLKLELGDAFLHWRFDKMGEDVTFAWTVE 300
           DPIGKGRRD CGCLDANSV CVKFHVAEKRHRLKLELG+ FL WRFDKMGEDVTFAWTVE
Sbjct: 241 DPIGKGRRDSCGCLDANSVGCVKFHVAEKRHRLKLELGNTFLQWRFDKMGEDVTFAWTVE 300

Query: 301 DEKKFEDIVSSNPPSLGISYWDDIIESFPSRSKADLVSYYYNVFLLRRRGHQNRVTPDEI 360
           DEKKFEDIVSSNPPSLGISYW+DIIESFPSRSKADLVSYYYNVFLLRRRGHQNRVTPDEI
Sbjct: 301 DEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVSYYYNVFLLRRRGHQNRVTPDEI 360

Query: 361 DSDEESDSGIATNGYGNEVHNSSGSIFYSPKKPR 395
           DSDEESDSGIATNG+GNEVHNS GSIFYSPKKPR
Sbjct: 361 DSDEESDSGIATNGFGNEVHNSPGSIFYSPKKPR 394

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BLAST of Clc06G03860 vs. NCBI nr
Match: XP_004138586.1 (AT-rich interactive domain-containing protein 1 [Cucumis sativus] >XP_011656344.1 AT-rich interactive domain-containing protein 1 [Cucumis sativus] >KGN45671.1 hypothetical protein Csa_005371 [Cucumis sativus])

HSP 1 Score: 737.6 bits (1903), Expect = 5.4e-209
Identity = 349/395 (88.35%), Postives = 378/395 (95.70%), Query Frame = 0


Query: 1   MLSDEFMNCVAFDKTSISDFSKRIIDMKSDRMKSGDVFPRRSKKLKDIDNCNIENEDIKI 60
           MLSDEFMNC+AFD  SISDFSKRI DMKSDRMKSGDVFPRRSKK KDI++CN EN D++I
Sbjct: 1   MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI 60

Query: 61  IDPPFIKETNVVQER-KQEPMLGLLDWLKGIARSPCDPSICSLPEKSKWKSYGNEEIWKQ 120
           IDPPF+KETNVVQE+ KQEPMLGLLDWLKGIAR+PCDPSI SLPEKSKWKSYGNEEIWKQ
Sbjct: 61  IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ 120

Query: 121 ILLVREEMFVKRQVDSSSEQSFVQRNQRMHPCMYDDDTVPIYNLRKRLSFDKKDLSQEPV 180
           +L+VREEMF+KRQVDSSSEQSF+Q+NQ+MHPCMYDDDT PIYNLRKRLS DKKDLSQEPV
Sbjct: 121 VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV 180

Query: 181 SKTSDSSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPLKKGRNRYLVE 240
           SK SDSSPTDS DDYKPVPLGSDYQA+VPEWNGVIS+SDLKWLGTQ+WPLKKGRNRYLVE
Sbjct: 181 SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVE 240

Query: 241 RDPIGKGRRDPCGCLDANSVACVKFHVAEKRHRLKLELGDAFLHWRFDKMGEDVTFAWTV 300
           RDPIG+GRRDPCGC+D NSV CV+FHV+EKRH+LKLELGDAFL WRFDKMGE+VTFAWTV
Sbjct: 241 RDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTV 300

Query: 301 EDEKKFEDIVSSNPPSLGISYWDDIIESFPSRSKADLVSYYYNVFLLRRRGHQNRVTPDE 360
           +DEKKFEDIVSSNPPSLGISYW+DIIESFPSRSKADLV YYYNVFLLRRRGHQNRVTP+E
Sbjct: 301 DDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNE 360

Query: 361 IDSDEESDSGIATNGYGNEVHNSSGSIFYSPKKPR 395
           I+SDEES+SG ATNG+GNEVHNSSGSIFYSPKKPR
Sbjct: 361 INSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR 395

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BLAST of Clc06G03860 vs. NCBI nr
Match: KAG7013748.1 (AT-rich interactive domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 726.1 bits (1873), Expect = 1.6e-205
Identity = 348/394 (88.32%), Postives = 370/394 (93.91%), Query Frame = 0


Query: 1   MLSDEFMNCVAFDKTSISDFSKRIIDMKSDRMKSGDVFPRRSKKLKDIDNCNIENEDIKI 60
           MLSDEFMN VAFD+ SISDFSKRI+ MKSD+MKSGDVFPRRSKKLKDI++CN ENEDIKI
Sbjct: 1   MLSDEFMNYVAFDENSISDFSKRILAMKSDKMKSGDVFPRRSKKLKDINHCNNENEDIKI 60

Query: 61  IDPPFIKETNVVQERKQEPMLGLLDWLKGIARSPCDPSICSLPEKSKWKSYGNEEIWKQI 120
           ID   +KE N   ERK+EPMLGLL+WLKGIAR+PCDPS+CSLPEKSKWKSYGNEEIWKQ+
Sbjct: 61  IDLRLVKEPNFTPERKEEPMLGLLNWLKGIARNPCDPSVCSLPEKSKWKSYGNEEIWKQV 120

Query: 121 LLVREEMFVKRQVDSSSEQSFVQRNQRMHPCMYDDDTVPIYNLRKRLSFDKKDLSQEPVS 180
           LLVREEMFVKRQVDSSSEQS VQRNQRMHPCMYDDDTVPIYNLRKRLSF+KKDLSQEPVS
Sbjct: 121 LLVREEMFVKRQVDSSSEQSLVQRNQRMHPCMYDDDTVPIYNLRKRLSFEKKDLSQEPVS 180

Query: 181 KTSDSSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPLKKGRNRYLVER 240
           KTSD SPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPLKKGRNRYLVER
Sbjct: 181 KTSDFSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPLKKGRNRYLVER 240

Query: 241 DPIGKGRRDPCGCLDANSVACVKFHVAEKRHRLKLELGDAFLHWRFDKMGEDVTFAWTVE 300
           DPIG+GRRDPCGC DANSV CVKFHV EKRH++KLELG+AFL WRFDKMGEDVTF+WT +
Sbjct: 241 DPIGRGRRDPCGCFDANSVGCVKFHVTEKRHKVKLELGNAFLQWRFDKMGEDVTFSWTAD 300

Query: 301 DEKKFEDIVSSNPPSLGISYWDDIIESFPSRSKADLVSYYYNVFLLRRRGHQNRVTPDEI 360
           DEKKFEDIV SNPPSLGIS+WD+IIESFPSRSKADLV YYYNVFLLRRRGHQNRVTP+EI
Sbjct: 301 DEKKFEDIVKSNPPSLGISFWDEIIESFPSRSKADLVCYYYNVFLLRRRGHQNRVTPNEI 360

Query: 361 DSDEESDSGIATNGYGNEVHNSSGSIFYSPKKPR 395
           DSDEES+SGI TNG  NEVHNSS SIFYSPKKPR
Sbjct: 361 DSDEESESGIVTNGLRNEVHNSSDSIFYSPKKPR 394

[Close]

BLAST of Clc06G03860 vs. NCBI nr
Match: XP_023547658.1 (AT-rich interactive domain-containing protein 1 [Cucurbita pepo subsp. pepo] >XP_023547659.1 AT-rich interactive domain-containing protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 724.2 bits (1868), Expect = 6.2e-205
Identity = 346/394 (87.82%), Postives = 371/394 (94.16%), Query Frame = 0


Query: 1   MLSDEFMNCVAFDKTSISDFSKRIIDMKSDRMKSGDVFPRRSKKLKDIDNCNIENEDIKI 60
           MLS+EFMN VAFD+ SISDFSKRI+ MKSD+MKSGDVFPRRSKKLKDI++CN E EDIKI
Sbjct: 1   MLSEEFMNYVAFDENSISDFSKRILAMKSDKMKSGDVFPRRSKKLKDINHCNNETEDIKI 60

Query: 61  IDPPFIKETNVVQERKQEPMLGLLDWLKGIARSPCDPSICSLPEKSKWKSYGNEEIWKQI 120
           ID   +KE N   ERK+EPMLGLL+WLKGIAR+PCDPS+CSLPEKSKWKSYGNEEIWKQ+
Sbjct: 61  IDLRLVKEPNFTPERKEEPMLGLLNWLKGIARNPCDPSVCSLPEKSKWKSYGNEEIWKQV 120

Query: 121 LLVREEMFVKRQVDSSSEQSFVQRNQRMHPCMYDDDTVPIYNLRKRLSFDKKDLSQEPVS 180
           LLVREEMFVKRQVDSSSEQS VQRNQRMHPCMYDDDTVPIYNLRKRLSF+KKDLSQEPVS
Sbjct: 121 LLVREEMFVKRQVDSSSEQSLVQRNQRMHPCMYDDDTVPIYNLRKRLSFEKKDLSQEPVS 180

Query: 181 KTSDSSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPLKKGRNRYLVER 240
           KTSDSSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWP+KKGRNRYLVER
Sbjct: 181 KTSDSSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPMKKGRNRYLVER 240

Query: 241 DPIGKGRRDPCGCLDANSVACVKFHVAEKRHRLKLELGDAFLHWRFDKMGEDVTFAWTVE 300
           DPIG+GRRDPCGC DANSV CVKFHV EKRH++KLELG+AFL WRFDKMGEDVTF+WT +
Sbjct: 241 DPIGRGRRDPCGCFDANSVGCVKFHVTEKRHKVKLELGNAFLQWRFDKMGEDVTFSWTAD 300

Query: 301 DEKKFEDIVSSNPPSLGISYWDDIIESFPSRSKADLVSYYYNVFLLRRRGHQNRVTPDEI 360
           DEKKFEDIV+SNPPSLGIS+WD+IIESFPSRSKADLV YYYNVFLLRRRGHQNRVTP+EI
Sbjct: 301 DEKKFEDIVTSNPPSLGISFWDEIIESFPSRSKADLVCYYYNVFLLRRRGHQNRVTPNEI 360

Query: 361 DSDEESDSGIATNGYGNEVHNSSGSIFYSPKKPR 395
           DSDEES+SGI TNG  NEVHNSS SIFYSPKKPR
Sbjct: 361 DSDEESESGIVTNGLRNEVHNSSDSIFYSPKKPR 394

[Close]

BLAST of Clc06G03860 vs. NCBI nr
Match: XP_008458204.1 (PREDICTED: AT-rich interactive domain-containing protein 1-like isoform X1 [Cucumis melo] >XP_008458205.1 PREDICTED: AT-rich interactive domain-containing protein 1-like isoform X1 [Cucumis melo] >XP_016902234.1 PREDICTED: AT-rich interactive domain-containing protein 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 723.8 bits (1867), Expect = 8.1e-205
Identity = 352/395 (89.11%), Postives = 373/395 (94.43%), Query Frame = 0


Query: 1   MLSDEFMNCVAFDKTSISDFSKRIIDMKSDRMKSGDVFPRRSKKLKDIDNCNIENEDIKI 60
           MLSDEFMNCVAFD+ SISDFSKRI+DMKSDRMK+GD FPRRSKKLKDI + NIENED++I
Sbjct: 1   MLSDEFMNCVAFDENSISDFSKRILDMKSDRMKTGDAFPRRSKKLKDIAHRNIENEDVQI 60

Query: 61  IDPPFIKETNVVQER-KQEPMLGLLDWLKGIARSPCDPSICSLPEKSKWKSYGNEEIWKQ 120
           IDPP IKETNVVQE+ KQEPMLGLLDWLK IAR+PCD SI SLPEKSKWKSYGNEEIWKQ
Sbjct: 61  IDPPLIKETNVVQEKSKQEPMLGLLDWLKVIARNPCDSSISSLPEKSKWKSYGNEEIWKQ 120

Query: 121 ILLVREEMFVKRQVDSSSEQSFVQRNQRMHPCMYDDDTVPIYNLRKRLSFDKKDLSQEPV 180
           +L+VREEMFVKRQVDSSSEQS VQRNQRMHPCMYDDDTVPIYNLRKRLS DKKD+SQEPV
Sbjct: 121 VLVVREEMFVKRQVDSSSEQSSVQRNQRMHPCMYDDDTVPIYNLRKRLSLDKKDVSQEPV 180

Query: 181 SKTSDSSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPLKKGRNRYLVE 240
           SK +DSSPTDS DDYKPV LGSDYQA+VPEWNGVISESDLKWLGTQ+WPLKKGRNRYLVE
Sbjct: 181 SKANDSSPTDSLDDYKPVLLGSDYQARVPEWNGVISESDLKWLGTQDWPLKKGRNRYLVE 240

Query: 241 RDPIGKGRRDPCGCLDANSVACVKFHVAEKRHRLKLELGDAFLHWRFDKMGEDVTFAWTV 300
           RDPIGKGRRDPCGC+DANSV CV+FHV+EKR RLKLELGDAFL WRFD+MGEDVT AWTV
Sbjct: 241 RDPIGKGRRDPCGCMDANSVGCVQFHVSEKRQRLKLELGDAFLRWRFDEMGEDVTLAWTV 300

Query: 301 EDEKKFEDIVSSNPPSLGISYWDDIIESFPSRSKADLVSYYYNVFLLRRRGHQNRVTPDE 360
           EDEKKFEDIVSSNPPSLGISYW+DIIESFPSRSKADLVSYYYNVFLLRRRGHQNRVTPDE
Sbjct: 301 EDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVSYYYNVFLLRRRGHQNRVTPDE 360

Query: 361 IDSDEESDSGIATNGYGNEVHNSSGSIFYSPKKPR 395
           IDSDEES+SG AT  +GNEVHNS GSIFYSPKKPR
Sbjct: 361 IDSDEESESGTATIRFGNEVHNSPGSIFYSPKKPR 395

[Close]

BLAST of Clc06G03860 vs. ExPASy Swiss-Prot
Match: Q84JT7 (AT-rich interactive domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=ARID1 PE=2 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 6.1e-70
Identity = 144/313 (46.01%), Postives = 200/313 (63.90%), Query Frame = 0


Query: 56  EDIKIIDPPFIKETNVVQERKQEPMLGLLDWLKGIARSPCDPSICSLPEKSKWKSYGNEE 115
           E I I++    +E +   +RK+E  L  L WL  +A+ PCDPS+  +P++S+W SYG+EE
Sbjct: 227 EQIMILE-SVTQECSSPGKRKRECPLETLKWLSDVAKDPCDPSLGIVPDRSEWVSYGSEE 286

Query: 116 IWKQILLVREEMFVKRQVDSSSEQSFVQRNQRMHPCMYDDDTVPIYNLRKRLSFDKKDLS 175
            WKQ+LL R     +   DS+ E+++ Q+ Q+MHPC+YDD     YNLR+RLS++  D  
Sbjct: 287 PWKQLLLFRAS---RTNNDSACEKTW-QKVQKMHPCLYDDSAGASYNLRERLSYE--DYK 346

Query: 176 QEPVSKTSDSSPTDSSDDYKPVPL-GSDYQAQVPEWNGVISESDLKWLGTQEWPLKKGRN 235
           +      SD   +D  D  +P  L GS +QA+VPEW G+  ESD KWLGT+ WPL K + 
Sbjct: 347 RGKTGNGSDIGSSDEED--RPCALVGSKFQAKVPEWTGITPESDSKWLGTRIWPLTKEQT 406

Query: 236 R--YLVERDPIGKGRRDPCGCLDANSVACVKFHVAEKRHRLKLELGDAFLHWRFDKMGED 295
           +   L+ERD IGKGR+DPCGC +  S+ CVKFH+  KR +LKLELG AF  W FD MGE 
Sbjct: 407 KANLLIERDRIGKGRQDPCGCHNPGSIECVKFHITAKRDKLKLELGPAFYMWCFDVMGEC 466

Query: 296 VTFAWTVEDEKKFEDIVSSNPPSLGISYWDDIIESFPSRSKADLVSYYYNVFLLRRRGHQ 355
               WT  + KK + ++SS PPSL  ++        PS+S+  +VSY+YNV LL+ R  Q
Sbjct: 467 TLQYWTDLELKKIKSLMSS-PPSLSPAFIHQAKMILPSKSRGKIVSYFYNVTLLQYRASQ 526

Query: 356 NRVTPDEIDSDEE 366
           +R+TP +IDSD +
Sbjct: 527 SRITPHDIDSDTD 529

[Close]

BLAST of Clc06G03860 vs. ExPASy Swiss-Prot
Match: Q9LDD4 (AT-rich interactive domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=ARID2 PE=1 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.4e-53
Identity = 123/348 (35.34%), Postives = 176/348 (50.57%), Query Frame = 0


Query: 76  KQEPMLGLLDWLKGIARSPCDPSICSLPEKSKWKSYGNEEIWKQILLVREEMFVKRQVDS 135
           K++ + G+L WL  +A SP DP+I  +P  SKWK Y   + W Q+   +  + V+R    
Sbjct: 218 KRDDLPGMLKWLALVATSPHDPAIGVIPHSSKWKQYNGNKCWLQVARAKNSLLVQRDNAE 277

Query: 136 SSEQSFVQRNQR--MHPCMYDDDTVPIYNLRKRLSFDKKDLSQEPVSKTSDSSPTDSSDD 195
              +    R  +   HP MY+DD   I  L  R S    +LS+   S   + S   S   
Sbjct: 278 LRYRYHPFRGHQNIHHPSMYEDDRKSIGRL--RYSIRPPNLSKHCSSSCCNGSSLVSLSK 337

Query: 196 YKP-----------------------------------VPLGSDYQAQVPEWNGVISESD 255
            +                                    + +G  +QAQV EW     +SD
Sbjct: 338 SRSTKCRKLTIIASERAGLTAGTSRARKRNKAEIPRRCIKVGHQHQAQVDEWTESGVDSD 397

Query: 256 LKWLGTQEWPLKKGRN-RYLVERDPIGKGRRDPCGCLDANSVACVKFHVAEKRHRLKLEL 315
            KWLGT+ WP +        +  D +GKGR D C C  +  V C + H+AEKR  LK EL
Sbjct: 398 SKWLGTRIWPPENSEALDQTLGNDLVGKGRPDSCSCELSGFVECTRLHIAEKRMELKREL 457

Query: 316 GDAFLHWRFDKMGEDVTFAWTVEDEKKFEDIVSSNPPSLGISYWDDIIESFPSRSKADLV 375
           GD F HWRF++MGE+V   WT E+EK+F+D++ ++P     S+W +  ++FP + + +LV
Sbjct: 458 GDDFFHWRFNQMGEEVCLRWTEEEEKRFKDMIIADPQ----SFWTNAAKNFPKKKREELV 517

Query: 376 SYYYNVFLLRRRGHQNRVTPDEIDSDEESDSGIATNGYGNEVHNSSGS 386
           SYY+NVFL+ RR +QNRVTP  IDSD+E   G     +G +   SSGS
Sbjct: 518 SYYFNVFLINRRRYQNRVTPKSIDSDDEGAFGSVGGSFGRDAVTSSGS 559

[Close]

BLAST of Clc06G03860 vs. ExPASy TrEMBL
Match: A0A0A0KD11 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G004620 PE=4 SV=1)

HSP 1 Score: 737.6 bits (1903), Expect = 2.6e-209
Identity = 349/395 (88.35%), Postives = 378/395 (95.70%), Query Frame = 0


Query: 1   MLSDEFMNCVAFDKTSISDFSKRIIDMKSDRMKSGDVFPRRSKKLKDIDNCNIENEDIKI 60
           MLSDEFMNC+AFD  SISDFSKRI DMKSDRMKSGDVFPRRSKK KDI++CN EN D++I
Sbjct: 1   MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI 60

Query: 61  IDPPFIKETNVVQER-KQEPMLGLLDWLKGIARSPCDPSICSLPEKSKWKSYGNEEIWKQ 120
           IDPPF+KETNVVQE+ KQEPMLGLLDWLKGIAR+PCDPSI SLPEKSKWKSYGNEEIWKQ
Sbjct: 61  IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ 120

Query: 121 ILLVREEMFVKRQVDSSSEQSFVQRNQRMHPCMYDDDTVPIYNLRKRLSFDKKDLSQEPV 180
           +L+VREEMF+KRQVDSSSEQSF+Q+NQ+MHPCMYDDDT PIYNLRKRLS DKKDLSQEPV
Sbjct: 121 VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV 180

Query: 181 SKTSDSSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPLKKGRNRYLVE 240
           SK SDSSPTDS DDYKPVPLGSDYQA+VPEWNGVIS+SDLKWLGTQ+WPLKKGRNRYLVE
Sbjct: 181 SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVE 240

Query: 241 RDPIGKGRRDPCGCLDANSVACVKFHVAEKRHRLKLELGDAFLHWRFDKMGEDVTFAWTV 300
           RDPIG+GRRDPCGC+D NSV CV+FHV+EKRH+LKLELGDAFL WRFDKMGE+VTFAWTV
Sbjct: 241 RDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTV 300

Query: 301 EDEKKFEDIVSSNPPSLGISYWDDIIESFPSRSKADLVSYYYNVFLLRRRGHQNRVTPDE 360
           +DEKKFEDIVSSNPPSLGISYW+DIIESFPSRSKADLV YYYNVFLLRRRGHQNRVTP+E
Sbjct: 301 DDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNE 360

Query: 361 IDSDEESDSGIATNGYGNEVHNSSGSIFYSPKKPR 395
           I+SDEES+SG ATNG+GNEVHNSSGSIFYSPKKPR
Sbjct: 361 INSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR 395

[Close]

BLAST of Clc06G03860 vs. ExPASy TrEMBL
Match: A0A1S3C8K0 (AT-rich interactive domain-containing protein 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497705 PE=4 SV=1)

HSP 1 Score: 723.8 bits (1867), Expect = 3.9e-205
Identity = 352/395 (89.11%), Postives = 373/395 (94.43%), Query Frame = 0


Query: 1   MLSDEFMNCVAFDKTSISDFSKRIIDMKSDRMKSGDVFPRRSKKLKDIDNCNIENEDIKI 60
           MLSDEFMNCVAFD+ SISDFSKRI+DMKSDRMK+GD FPRRSKKLKDI + NIENED++I
Sbjct: 1   MLSDEFMNCVAFDENSISDFSKRILDMKSDRMKTGDAFPRRSKKLKDIAHRNIENEDVQI 60

Query: 61  IDPPFIKETNVVQER-KQEPMLGLLDWLKGIARSPCDPSICSLPEKSKWKSYGNEEIWKQ 120
           IDPP IKETNVVQE+ KQEPMLGLLDWLK IAR+PCD SI SLPEKSKWKSYGNEEIWKQ
Sbjct: 61  IDPPLIKETNVVQEKSKQEPMLGLLDWLKVIARNPCDSSISSLPEKSKWKSYGNEEIWKQ 120

Query: 121 ILLVREEMFVKRQVDSSSEQSFVQRNQRMHPCMYDDDTVPIYNLRKRLSFDKKDLSQEPV 180
           +L+VREEMFVKRQVDSSSEQS VQRNQRMHPCMYDDDTVPIYNLRKRLS DKKD+SQEPV
Sbjct: 121 VLVVREEMFVKRQVDSSSEQSSVQRNQRMHPCMYDDDTVPIYNLRKRLSLDKKDVSQEPV 180

Query: 181 SKTSDSSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPLKKGRNRYLVE 240
           SK +DSSPTDS DDYKPV LGSDYQA+VPEWNGVISESDLKWLGTQ+WPLKKGRNRYLVE
Sbjct: 181 SKANDSSPTDSLDDYKPVLLGSDYQARVPEWNGVISESDLKWLGTQDWPLKKGRNRYLVE 240

Query: 241 RDPIGKGRRDPCGCLDANSVACVKFHVAEKRHRLKLELGDAFLHWRFDKMGEDVTFAWTV 300
           RDPIGKGRRDPCGC+DANSV CV+FHV+EKR RLKLELGDAFL WRFD+MGEDVT AWTV
Sbjct: 241 RDPIGKGRRDPCGCMDANSVGCVQFHVSEKRQRLKLELGDAFLRWRFDEMGEDVTLAWTV 300

Query: 301 EDEKKFEDIVSSNPPSLGISYWDDIIESFPSRSKADLVSYYYNVFLLRRRGHQNRVTPDE 360
           EDEKKFEDIVSSNPPSLGISYW+DIIESFPSRSKADLVSYYYNVFLLRRRGHQNRVTPDE
Sbjct: 301 EDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVSYYYNVFLLRRRGHQNRVTPDE 360

Query: 361 IDSDEESDSGIATNGYGNEVHNSSGSIFYSPKKPR 395
           IDSDEES+SG AT  +GNEVHNS GSIFYSPKKPR
Sbjct: 361 IDSDEESESGTATIRFGNEVHNSPGSIFYSPKKPR 395

[Close]

BLAST of Clc06G03860 vs. ExPASy TrEMBL
Match: A0A6J1H398 (AT-rich interactive domain-containing protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460098 PE=4 SV=1)

HSP 1 Score: 723.0 bits (1865), Expect = 6.7e-205
Identity = 347/394 (88.07%), Postives = 370/394 (93.91%), Query Frame = 0


Query: 1   MLSDEFMNCVAFDKTSISDFSKRIIDMKSDRMKSGDVFPRRSKKLKDIDNCNIENEDIKI 60
           MLSDEFMN VAFD+ SISDFSKRI+ MKSD+MKSGDVFPRRSKKLKDI++CN E+EDIKI
Sbjct: 1   MLSDEFMNYVAFDENSISDFSKRILAMKSDKMKSGDVFPRRSKKLKDINHCNNESEDIKI 60

Query: 61  IDPPFIKETNVVQERKQEPMLGLLDWLKGIARSPCDPSICSLPEKSKWKSYGNEEIWKQI 120
           ID   +KE N   ERK+E MLGLL+WLKGIAR+PCDPS+CSLPEKSKWKSYGNEEIWKQ+
Sbjct: 61  IDLRLVKEPNFTPERKEERMLGLLNWLKGIARNPCDPSVCSLPEKSKWKSYGNEEIWKQV 120

Query: 121 LLVREEMFVKRQVDSSSEQSFVQRNQRMHPCMYDDDTVPIYNLRKRLSFDKKDLSQEPVS 180
           LLVREEMFVKRQVDSSSEQS VQRNQRMHPCMYDDD VPIYNLRKRLSF+KKDLSQEPVS
Sbjct: 121 LLVREEMFVKRQVDSSSEQSLVQRNQRMHPCMYDDDMVPIYNLRKRLSFEKKDLSQEPVS 180

Query: 181 KTSDSSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPLKKGRNRYLVER 240
           KTSDSSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPLKKGRNRYLVER
Sbjct: 181 KTSDSSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPLKKGRNRYLVER 240

Query: 241 DPIGKGRRDPCGCLDANSVACVKFHVAEKRHRLKLELGDAFLHWRFDKMGEDVTFAWTVE 300
           DPIG+GRRDPCGC DANSV CVKFHV EKRH++KLELGDAFL WRFDKMGEDVTF+WT +
Sbjct: 241 DPIGRGRRDPCGCFDANSVGCVKFHVTEKRHKVKLELGDAFLQWRFDKMGEDVTFSWTAD 300

Query: 301 DEKKFEDIVSSNPPSLGISYWDDIIESFPSRSKADLVSYYYNVFLLRRRGHQNRVTPDEI 360
           DEKKFEDIV+SNPPSLGIS+WD+IIESFPSRSKADLV YYYNVFLLRRRGHQNRVTP+EI
Sbjct: 301 DEKKFEDIVTSNPPSLGISFWDEIIESFPSRSKADLVCYYYNVFLLRRRGHQNRVTPNEI 360

Query: 361 DSDEESDSGIATNGYGNEVHNSSGSIFYSPKKPR 395
           DSDEES+SGI TNG  NEVHNSS SIFYSPKKPR
Sbjct: 361 DSDEESESGIVTNGLRNEVHNSSDSIFYSPKKPR 394

[Close]

BLAST of Clc06G03860 vs. ExPASy TrEMBL
Match: A0A6J1H4K9 (AT-rich interactive domain-containing protein 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460098 PE=4 SV=1)

HSP 1 Score: 723.0 bits (1865), Expect = 6.7e-205
Identity = 347/394 (88.07%), Postives = 370/394 (93.91%), Query Frame = 0


Query: 1   MLSDEFMNCVAFDKTSISDFSKRIIDMKSDRMKSGDVFPRRSKKLKDIDNCNIENEDIKI 60
           MLSDEFMN VAFD+ SISDFSKRI+ MKSD+MKSGDVFPRRSKKLKDI++CN E+EDIKI
Sbjct: 1   MLSDEFMNYVAFDENSISDFSKRILAMKSDKMKSGDVFPRRSKKLKDINHCNNESEDIKI 60

Query: 61  IDPPFIKETNVVQERKQEPMLGLLDWLKGIARSPCDPSICSLPEKSKWKSYGNEEIWKQI 120
           ID   +KE N   ERK+E MLGLL+WLKGIAR+PCDPS+CSLPEKSKWKSYGNEEIWKQ+
Sbjct: 61  IDLRLVKEPNFTPERKEERMLGLLNWLKGIARNPCDPSVCSLPEKSKWKSYGNEEIWKQV 120

Query: 121 LLVREEMFVKRQVDSSSEQSFVQRNQRMHPCMYDDDTVPIYNLRKRLSFDKKDLSQEPVS 180
           LLVREEMFVKRQVDSSSEQS VQRNQRMHPCMYDDD VPIYNLRKRLSF+KKDLSQEPVS
Sbjct: 121 LLVREEMFVKRQVDSSSEQSLVQRNQRMHPCMYDDDMVPIYNLRKRLSFEKKDLSQEPVS 180

Query: 181 KTSDSSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPLKKGRNRYLVER 240
           KTSDSSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPLKKGRNRYLVER
Sbjct: 181 KTSDSSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPLKKGRNRYLVER 240

Query: 241 DPIGKGRRDPCGCLDANSVACVKFHVAEKRHRLKLELGDAFLHWRFDKMGEDVTFAWTVE 300
           DPIG+GRRDPCGC DANSV CVKFHV EKRH++KLELGDAFL WRFDKMGEDVTF+WT +
Sbjct: 241 DPIGRGRRDPCGCFDANSVGCVKFHVTEKRHKVKLELGDAFLQWRFDKMGEDVTFSWTAD 300

Query: 301 DEKKFEDIVSSNPPSLGISYWDDIIESFPSRSKADLVSYYYNVFLLRRRGHQNRVTPDEI 360
           DEKKFEDIV+SNPPSLGIS+WD+IIESFPSRSKADLV YYYNVFLLRRRGHQNRVTP+EI
Sbjct: 301 DEKKFEDIVTSNPPSLGISFWDEIIESFPSRSKADLVCYYYNVFLLRRRGHQNRVTPNEI 360

Query: 361 DSDEESDSGIATNGYGNEVHNSSGSIFYSPKKPR 395
           DSDEES+SGI TNG  NEVHNSS SIFYSPKKPR
Sbjct: 361 DSDEESESGIVTNGLRNEVHNSSDSIFYSPKKPR 394

[Close]

BLAST of Clc06G03860 vs. ExPASy TrEMBL
Match: A0A6J1L5C2 (AT-rich interactive domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111499270 PE=4 SV=1)

HSP 1 Score: 718.0 bits (1852), Expect = 2.2e-203
Identity = 343/394 (87.06%), Postives = 370/394 (93.91%), Query Frame = 0


Query: 1   MLSDEFMNCVAFDKTSISDFSKRIIDMKSDRMKSGDVFPRRSKKLKDIDNCNIENEDIKI 60
           MLSDEFMN VAFD+ SISDFSKRI+ MKSD+MKSGDVFPRRSKKLKDI++CN ENEDIKI
Sbjct: 1   MLSDEFMNYVAFDENSISDFSKRILAMKSDKMKSGDVFPRRSKKLKDINHCNNENEDIKI 60

Query: 61  IDPPFIKETNVVQERKQEPMLGLLDWLKGIARSPCDPSICSLPEKSKWKSYGNEEIWKQI 120
           ID   +KE N   ERK+EP+LGLL+WLKGIAR+PCDPS+CSLPEKSKWKSYGNEEIWKQ+
Sbjct: 61  IDLRLVKEPNFTPERKEEPLLGLLNWLKGIARNPCDPSVCSLPEKSKWKSYGNEEIWKQV 120

Query: 121 LLVREEMFVKRQVDSSSEQSFVQRNQRMHPCMYDDDTVPIYNLRKRLSFDKKDLSQEPVS 180
           LLVRE+MFVKRQVDSSSEQS VQRNQRMHPCMYD+DTVPIYNLRKRLSF+KKDLSQEPVS
Sbjct: 121 LLVREKMFVKRQVDSSSEQSLVQRNQRMHPCMYDNDTVPIYNLRKRLSFEKKDLSQEPVS 180

Query: 181 KTSDSSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPLKKGRNRYLVER 240
           KTSDSSPTDSSDDYKPVPLGSDYQ QVPEWNGVISESDLKWLGTQ+WPLKK RNRYLVER
Sbjct: 181 KTSDSSPTDSSDDYKPVPLGSDYQTQVPEWNGVISESDLKWLGTQDWPLKKVRNRYLVER 240

Query: 241 DPIGKGRRDPCGCLDANSVACVKFHVAEKRHRLKLELGDAFLHWRFDKMGEDVTFAWTVE 300
           DPIG+GRRDPCGC DANSV CVKFHV EKRH++KLELGDAFL WRFDKMGEDVTF+WT +
Sbjct: 241 DPIGRGRRDPCGCFDANSVGCVKFHVTEKRHKVKLELGDAFLQWRFDKMGEDVTFSWTAD 300

Query: 301 DEKKFEDIVSSNPPSLGISYWDDIIESFPSRSKADLVSYYYNVFLLRRRGHQNRVTPDEI 360
           DEKKFEDIV+SNPPSLGIS+WD+IIESFPSRSKADLV YYYNVFLLRRRGHQNRVTP+EI
Sbjct: 301 DEKKFEDIVTSNPPSLGISFWDEIIESFPSRSKADLVCYYYNVFLLRRRGHQNRVTPNEI 360

Query: 361 DSDEESDSGIATNGYGNEVHNSSGSIFYSPKKPR 395
           DSDEES+SGI TNG  N+VHNSS SIFYSPKKPR
Sbjct: 361 DSDEESESGIVTNGLLNQVHNSSDSIFYSPKKPR 394

[Close]

BLAST of Clc06G03860 vs. TAIR 10
Match: AT2G46040.1 (ARID/BRIGHT DNA-binding domain;ELM2 domain protein )

HSP 1 Score: 266.2 bits (679), Expect = 4.3e-71
Identity = 144/313 (46.01%), Postives = 200/313 (63.90%), Query Frame = 0


Query: 56  EDIKIIDPPFIKETNVVQERKQEPMLGLLDWLKGIARSPCDPSICSLPEKSKWKSYGNEE 115
           E I I++    +E +   +RK+E  L  L WL  +A+ PCDPS+  +P++S+W SYG+EE
Sbjct: 227 EQIMILE-SVTQECSSPGKRKRECPLETLKWLSDVAKDPCDPSLGIVPDRSEWVSYGSEE 286

Query: 116 IWKQILLVREEMFVKRQVDSSSEQSFVQRNQRMHPCMYDDDTVPIYNLRKRLSFDKKDLS 175
            WKQ+LL R     +   DS+ E+++ Q+ Q+MHPC+YDD     YNLR+RLS++  D  
Sbjct: 287 PWKQLLLFRAS---RTNNDSACEKTW-QKVQKMHPCLYDDSAGASYNLRERLSYE--DYK 346

Query: 176 QEPVSKTSDSSPTDSSDDYKPVPL-GSDYQAQVPEWNGVISESDLKWLGTQEWPLKKGRN 235
           +      SD   +D  D  +P  L GS +QA+VPEW G+  ESD KWLGT+ WPL K + 
Sbjct: 347 RGKTGNGSDIGSSDEED--RPCALVGSKFQAKVPEWTGITPESDSKWLGTRIWPLTKEQT 406

Query: 236 R--YLVERDPIGKGRRDPCGCLDANSVACVKFHVAEKRHRLKLELGDAFLHWRFDKMGED 295
           +   L+ERD IGKGR+DPCGC +  S+ CVKFH+  KR +LKLELG AF  W FD MGE 
Sbjct: 407 KANLLIERDRIGKGRQDPCGCHNPGSIECVKFHITAKRDKLKLELGPAFYMWCFDVMGEC 466

Query: 296 VTFAWTVEDEKKFEDIVSSNPPSLGISYWDDIIESFPSRSKADLVSYYYNVFLLRRRGHQ 355
               WT  + KK + ++SS PPSL  ++        PS+S+  +VSY+YNV LL+ R  Q
Sbjct: 467 TLQYWTDLELKKIKSLMSS-PPSLSPAFIHQAKMILPSKSRGKIVSYFYNVTLLQYRASQ 526

Query: 356 NRVTPDEIDSDEE 366
           +R+TP +IDSD +
Sbjct: 527 SRITPHDIDSDTD 529

[Close]

BLAST of Clc06G03860 vs. TAIR 10
Match: AT4G11400.1 (ARID/BRIGHT DNA-binding domain;ELM2 domain protein )

HSP 1 Score: 211.8 bits (538), Expect = 9.6e-55
Identity = 123/348 (35.34%), Postives = 176/348 (50.57%), Query Frame = 0


Query: 76  KQEPMLGLLDWLKGIARSPCDPSICSLPEKSKWKSYGNEEIWKQILLVREEMFVKRQVDS 135
           K++ + G+L WL  +A SP DP+I  +P  SKWK Y   + W Q+   +  + V+R    
Sbjct: 218 KRDDLPGMLKWLALVATSPHDPAIGVIPHSSKWKQYNGNKCWLQVARAKNSLLVQRDNAE 277

Query: 136 SSEQSFVQRNQR--MHPCMYDDDTVPIYNLRKRLSFDKKDLSQEPVSKTSDSSPTDSSDD 195
              +    R  +   HP MY+DD   I  L  R S    +LS+   S   + S   S   
Sbjct: 278 LRYRYHPFRGHQNIHHPSMYEDDRKSIGRL--RYSIRPPNLSKHCSSSCCNGSSLVSLSK 337

Query: 196 YKP-----------------------------------VPLGSDYQAQVPEWNGVISESD 255
            +                                    + +G  +QAQV EW     +SD
Sbjct: 338 SRSTKCRKLTIIASERAGLTAGTSRARKRNKAEIPRRCIKVGHQHQAQVDEWTESGVDSD 397

Query: 256 LKWLGTQEWPLKKGRN-RYLVERDPIGKGRRDPCGCLDANSVACVKFHVAEKRHRLKLEL 315
            KWLGT+ WP +        +  D +GKGR D C C  +  V C + H+AEKR  LK EL
Sbjct: 398 SKWLGTRIWPPENSEALDQTLGNDLVGKGRPDSCSCELSGFVECTRLHIAEKRMELKREL 457

Query: 316 GDAFLHWRFDKMGEDVTFAWTVEDEKKFEDIVSSNPPSLGISYWDDIIESFPSRSKADLV 375
           GD F HWRF++MGE+V   WT E+EK+F+D++ ++P     S+W +  ++FP + + +LV
Sbjct: 458 GDDFFHWRFNQMGEEVCLRWTEEEEKRFKDMIIADPQ----SFWTNAAKNFPKKKREELV 517

Query: 376 SYYYNVFLLRRRGHQNRVTPDEIDSDEESDSGIATNGYGNEVHNSSGS 386
           SYY+NVFL+ RR +QNRVTP  IDSD+E   G     +G +   SSGS
Sbjct: 518 SYYFNVFLINRRRYQNRVTPKSIDSDDEGAFGSVGGSFGRDAVTSSGS 559

[Close]

BLAST of Clc06G03860 vs. TAIR 10
Match: AT5G04110.1 (DNA GYRASE B3 )

HSP 1 Score: 136.3 bits (342), Expect = 5.2e-32
Identity = 76/209 (36.36%), Postives = 113/209 (54.07%), Query Frame = 0


Query: 172 KDLSQEPVSKTSDSSPTDSSDDYKP-VPLGSDYQAQVPEWNGVISE----------SDLK 231
           KD+S    +KTS    T  S+  +P +P+G  +QA++P W     +          + L+
Sbjct: 339 KDVS----NKTSKDVITHGSNKTRPAIPIGPRFQAEIPVWIAPTKKGKFYGSPGDSNTLR 398

Query: 232 WLGTQEWP---LKKGRNRYLVERDPIGKGRRDPCGCLDANSVACVKFHVAEKRHRLKLEL 291
           WLGT  WP   LKK      V    +G+GR D C C    S  C+K H  E +  L+ E+
Sbjct: 399 WLGTGVWPTYSLKK-----TVHSKKVGEGRSDSCSCASPRSTNCIKRHKKEAQELLEKEI 458

Query: 292 GDAFLHWRFDKMGEDVTF-AWTVEDEKKFEDIVSSNPPSLGISYWDDIIESFPSRSKADL 351
             AF  W FD+MGE++   +WT ++E++FE +V  NP S    +W+    +FP +SK DL
Sbjct: 459 NRAFSTWEFDQMGEEIVLKSWTAKEERRFEALVKKNPLSSSDGFWEFASNAFPQKSKKDL 518

Query: 352 VSYYYNVFLLRRRGHQNRVTPDEIDSDEE 366
           +SYYYNVFL++R         + IDSD++
Sbjct: 519 LSYYYNVFLIKRMRLLKSSAANNIDSDDD 538

[Close]

BLAST of Clc06G03860 vs. TAIR 10
Match: AT2G03470.1 (ELM2 domain-containing protein )

HSP 1 Score: 120.2 bits (300), Expect = 3.8e-27
Identity = 75/213 (35.21%), Postives = 112/213 (52.58%), Query Frame = 0


Query: 175 SQEPVSKTSDSSPTDSSDDY------------------KPVPLGSDYQAQVPEW--NGVI 234
           SQ  V+  SD S   S  D+                  K V +GS++QA +PE+    ++
Sbjct: 83  SQSGVTTQSDLSHQSSGSDFTWKPVEDVYTCLMNQPPRKQVLVGSNHQADIPEFVKEEIL 142

Query: 235 SESDLKWLGTQEWPLKKGRNRYLVERDPIGKGR-RDPCGCLDANSVACVKFHVAEKRHRL 294
            +S+ +     E  L +     + + D  G G+ R  C CLD  S+ CV+ H+ E R  L
Sbjct: 143 DQSEARTKEDLEGKLMRKCVIPMSDSDLCGTGQGRKECLCLDKGSIRCVRRHIIEARESL 202

Query: 295 KLELG-DAFLHWRFDKMGEDVTFAWTVEDEKKFEDIVSSNPPSLGISYWDDIIESFPSRS 354
              +G + F+     +MGE+V   WT E+E  F  +V SNP S G  +W  +  +FPSR+
Sbjct: 203 VETIGYERFMELGLCEMGEEVASLWTEEEEDLFHKVVYSNPFSAGRDFWKQLKGTFPSRT 262

Query: 355 KADLVSYYYNVFLLRRRGHQNRVTPDEIDSDEE 366
             +LVSYY+NVF+LRRRG QNR    ++DSD++
Sbjct: 263 MKELVSYYFNVFILRRRGIQNRFKALDVDSDDD 295

[Close]

BLAST of Clc06G03860 vs. TAIR 10
Match: AT2G03470.2 (ELM2 domain-containing protein )

HSP 1 Score: 120.2 bits (300), Expect = 3.8e-27
Identity = 75/213 (35.21%), Postives = 112/213 (52.58%), Query Frame = 0


Query: 175 SQEPVSKTSDSSPTDSSDDY------------------KPVPLGSDYQAQVPEW--NGVI 234
           SQ  V+  SD S   S  D+                  K V +GS++QA +PE+    ++
Sbjct: 82  SQSGVTTQSDLSHQSSGSDFTWKPVEDVYTCLMNQPPRKQVLVGSNHQADIPEFVKEEIL 141

Query: 235 SESDLKWLGTQEWPLKKGRNRYLVERDPIGKGR-RDPCGCLDANSVACVKFHVAEKRHRL 294
            +S+ +     E  L +     + + D  G G+ R  C CLD  S+ CV+ H+ E R  L
Sbjct: 142 DQSEARTKEDLEGKLMRKCVIPMSDSDLCGTGQGRKECLCLDKGSIRCVRRHIIEARESL 201

Query: 295 KLELG-DAFLHWRFDKMGEDVTFAWTVEDEKKFEDIVSSNPPSLGISYWDDIIESFPSRS 354
              +G + F+     +MGE+V   WT E+E  F  +V SNP S G  +W  +  +FPSR+
Sbjct: 202 VETIGYERFMELGLCEMGEEVASLWTEEEEDLFHKVVYSNPFSAGRDFWKQLKGTFPSRT 261

Query: 355 KADLVSYYYNVFLLRRRGHQNRVTPDEIDSDEE 366
             +LVSYY+NVF+LRRRG QNR    ++DSD++
Sbjct: 262 MKELVSYYFNVFILRRRGIQNRFKALDVDSDDD 294

The following BLAST results are available for this feature:

BLAST of Clc06G03860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875899.1	3.4e-219	94.16	AT-rich interactive domain-containing protein 1-like [Benincasa hispida]	[more]
XP_004138586.1	5.4e-209	88.35	AT-rich interactive domain-containing protein 1 [Cucumis sativus] >XP_011656344....	[more]
KAG7013748.1	1.6e-205	88.32	AT-rich interactive domain-containing protein 1, partial [Cucurbita argyrosperma...	[more]
XP_023547658.1	6.2e-205	87.82	AT-rich interactive domain-containing protein 1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_008458204.1	8.1e-205	89.11	PREDICTED: AT-rich interactive domain-containing protein 1-like isoform X1 [Cucu...	[more]

BLAST of Clc06G03860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JT7	6.1e-70	46.01	AT-rich interactive domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LDD4	1.4e-53	35.34	AT-rich interactive domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Clc06G03860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KD11	2.6e-209	88.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G004620 PE=4 SV=1	[more]
A0A1S3C8K0	3.9e-205	89.11	AT-rich interactive domain-containing protein 1-like isoform X1 OS=Cucumis melo ...	[more]
A0A6J1H398	6.7e-205	88.07	AT-rich interactive domain-containing protein 1 isoform X1 OS=Cucurbita moschata...	[more]
A0A6J1H4K9	6.7e-205	88.07	AT-rich interactive domain-containing protein 1 isoform X2 OS=Cucurbita moschata...	[more]
A0A6J1L5C2	2.2e-203	87.06	AT-rich interactive domain-containing protein 1-like OS=Cucurbita maxima OX=3661...	[more]

BLAST of Clc06G03860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46040.1	4.3e-71	46.01	ARID/BRIGHT DNA-binding domain;ELM2 domain protein	[more]
AT4G11400.1	9.6e-55	35.34	ARID/BRIGHT DNA-binding domain;ELM2 domain protein	[more]
AT5G04110.1	5.2e-32	36.36	DNA GYRASE B3	[more]
AT2G03470.1	3.8e-27	35.21	ELM2 domain-containing protein	[more]
AT2G03470.2	3.8e-27	35.21	ELM2 domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000949	ELM2 domain	SMART	SM01189	ELM2_2	coord: 197..248 e-value: 0.0019 score: 27.5
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 296..343 e-value: 5.4E-6 score: 26.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 355..394
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 367..388
None	No IPR available	PANTHER	PTHR46410:SF1	AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1	coord: 43..393
None	No IPR available	PANTHER	PTHR46410	AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2	coord: 43..393
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 296..344 e-value: 4.01076E-4 score: 36.0142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G03860.1	Clc06G03860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus