Clc06G03460 (gene) Watermelon (cordophanus) v2

Overview
NameClc06G03460
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionDExH-box ATP-dependent RNA helicase
LocationClcChr06: 3646020 .. 3657023 (+)
RNA-Seq ExpressionClc06G03460
SyntenyClc06G03460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGGATTTTTAGTGTGATACTCAAAACCTCAAAGGCTCAAACCCCAAATGTAGACTGGCGAAGACAAAAATGAGAATCCCGTTGTTGAGAAGAATCGTACACAAAATTTCGGTTAAACAAATTGGCGCGCCGTTTACTCCTTCTTAGGGTTTATTCAGAGAGAAAAACCCTTGAGAGAGTCTGCTTTTGGGTTTTGATACTCACCAAATCCATAACCCTGCTCGCCAATTCGGTTGCATCCCTCCTCAATTCCAAGCTGCCATGGGCTCTTCGAAGAGAAAGCTGGTCGACGATGCGCCCAGACAATCTTCGCCGAAGCAACACAGAGCCAATGCCCGTGCCAATGTTGAAGACGAACCAGTTGCGTGTGTTCATGATGTCTCCTACCCCGAGGGTTCTTTTAATCCTCTCCCATCTTCAAGTATCTCTTCCACTGGAGAGAAGTTGGAACCGGCTAAGGTCTTCCCTTTCTCTCTGGACCCCTTTCAGTCTGAGGCTATCAAGTGCTTGGAAACTGGAGAATCTGTCATGGTAACTTAATTTTATCCAACTTTTCATTGGTTTCTTTGGCTATTAACTCGAGTTCAGTGATGAACAAGTGTAGAAAGAAAGTAACTGTACTGTTTTTCTTAGAGGAACCCGTGTTTGCTGAAATGAATGCATTCGGTGTTTATGTTAGTAGACTTTGAAGGGGAATACTAGAGTTGTGTGGCTTCTGCTTCATTCGCAATAAAATGTAACATGAACTTTATTTTCAGTTTGAAAGCACAAGTTTTGAATAGGAGGTTGAGTTTGACCATGCTTTTCACTTCTTATATTTCAAAACCCCTTGTACCCTTCCTCCTTCCAAAGTTTGAATGTCGAACGCCGTAAATGTTTAGCTGATTGGATTATGAGGAATTGATTATCCTTCTCCTTCAGATTGGAAACCGTTACTAACGTAATTTTCTACAGTAATTCATTAGTTGAGCATAATGCTAGGAGCCCATTGGATTTTACCTAGAGGTTACTGAATGAATATTTGCCGTTCAGTTTCAGGCAGAATCGGAGTTCTGATCATATATATTTACACAGAGAGTAGAAAGGTTTGAACCGTACTATATAATTCATTTTGCCAACAACTTGAAAGTGGAAGATGCTAGTTTTGTTGTACTTTCAATGGTATGAATGGACTTATTAATAACAAATACGCTTAGCTTCCATGTGAAAATCCTAACTCGGTCATTTTTATGCCACTCCAACTCTAGTTTGGTTGATTGTCACAACTTTTTATTATGTAGAGTTCAGTAAGTGATAATCAGCTCTTTGACAGGTGTCTGCCCATACATCAGCTGGTAAAACTGTTGTGGCATTGTATGCAATTGCCATGTCTCTCCGGAATAAACAGCGTGTCATATACACCTCACCAATCAAGGCCCTCAGCAACCAAAAATATAGGGAATTTAAAGAAGAATTCTCAGATGTTGGTTTAATGACTGGGGATGTGACAATTGATCCAAATGCTTCTTGTCTGGTGTGCTTCTTGGCTTTTATTCACTGCTTCATTTTTCAGGATTCTAAATTTTAAACCATTGGTAAATGGGTGGTTTTTTCCATCTTCAGGTCATGACCACAGAAATTTGGCGTAGCATGCAGTACAAAGGATCAGAGGTTACACGGGAAGTGGCATGGATTATTTTTGATGAAGTACATTACATGCGTGATCGGGAGCGAGGTGTTGTTTGGGAAGAGAGCATTGTCATGGCTCCAAAGAATGCTAGATTTGTTTTCCTCTCAGCAACTGTACCAAATGCAAAAGAATTTGCTGATTGGGTTGCAAAGGTCCACTTCTTGGTTCAATCTTGTTATCAGTAATTAATTGAAAATGAAAATATTTTTTGGGTCATCTGCAAAAAGAGCTAAAATGATAACTTTGCAATGTTCTATTCTGGGAAGTGCTTGTCGATTAGTTTCTTAGCATAATGGTGATGGAAGCCTTTTGATCGTCAATTTTTTCTGTCCTCATTTATTAGTTCCTATTTTAATTTTTTTGATTGTTCTTCCACTGCATAATTTTTACTTTTATAGGAAATGGGGAATGGATTGATCATGGAGAAAAGAAACTTTGGCATTAGGTTGTGACATTAGATGGCTTGCCTTGCATTACTCTTCAATCTTCATTTTATATGATTCATATGGCCTTTTCGATACAGTTATTTTATATGAAGAAATAAATAAATAAATGTGCCAGCTTGGCTGATTTGTATTAATGCAGGTCCACCACCAACCATGTCATATTGTTTATACTGACTATCGGCCAACACCTCTTCAACACTATATTTTCCCATCTGGGGGTGAAGGCTTATACTTGGTGGTTGATGAAAAGGGGCATTTTCGGGAGGATAGCTTTCAAAAAGCTTTAAATGCACTTGTCCCTGTTAGTGATAGTGACAAGAAAAAGGAGAATAATGGGAAGTGGCAGAAGAGTTTGACTTTGGGCAAAACAGGTGAAGAGAGTGATATATTTAAGATGGTGAAGATGATAATTCAACGTCAATATGATCCTGTTATACTTTTCAGCTTTAGCAAAAGAGAATGTGAATTTCTTGCAATGCAGGTAATGTCCTATGGTGTTCTTGTGGTTGCTTAGTTGATCTCTACTAGTACTAGGTGTCGGCTTGTTTGTGGTCTTTGTTTAATGGACTTGTAAGATGTGGCATCATCGTTAGAAATTTGATGCTTATGAAGGATCCAAGATCTTATGGTAGTAATTTATAGTTATTATTTTATTTTATTTTCTAAGAATTGAGACTGCTTTCATTCAAGGGCGAAAACTTAAAATGAGTGGAGATTAGATACCCAATGGAGGCAGAAGATATGAAAGAAAAAGCTCCTATTGGATAATTTTGAAACGGAAGTATCATTATAAAACTCTTAGAAAAGTACACCAAGATGAAGCCAAGAATCTAAAAACAGAATTCTGTGTTAACATTGTCATAAATTCTATTGCGTGAATGCATGACAAAGAGGCATTTCTTTGAATAAGCTCCCACTCTTAGTAGTAATTGGTCAGAATCCTTAGAGAATTAGAACATTGAGGGTGATTACAGACAGAAAGGGGGGAGGCGGTTTGGTTTGAGTTTATAATTATTTAAATAATGAGATTTGCATGTTGGTTGTTAGGTTTTTGAAACGGGAACTGTTTTGGTTTCTGAGCATGTTGTAGTTAACTATTCTATCTGGGTCATTGCATCTTTACTAGCTGTCAACTTTAACATGGTTTCCTTGTTGTTATAGATGGCAAAACTGGATCTAAATGGTGATGACGAAAAGGCGAACATAGAAACCATCTTTTGGAGTGCGATGGATATGCTTTCAGATGATGATAAAAAGCTCCCTCAGGCAAGCCACTCATTTTCCGCAAAGTTTTGTATAAAATACTGAGGTTGCAATTTTAGAGTAGGGTGTGAAATAATAGGATTTGTTTGGGGACTAATGGATTTAGCAAGGAGTTTTGTCCCTAGCTAGGAGTAATGTCTCTTTGGGTTCAATAGCTATAGTCTAAAGAGTTTTGTAACAATTCGTTTGGACTTGTTCTTTTGGATTGGAGCCTTCTTTTCGTATAGCTATTAGCTAGTGATTGATGCCCCTTCTTTTTTTTTTTGTTTTTTTGTTTTTTTTTTTTTTTTGTTTGTATGTATGTCCTTGTTTTCTTTCATGGTTCTTCATGAAAGCATGTTTTATCATAAAATATATTTTTGCAGGTATACTTAGATTTTATAGTTAATGGGGAAATTGGAAGGAAATTGGATTTTTGTTGTTGATGAAAATTTTGTAGCTCTTTAGTTTGACGAAATTTAAACAGATATGCAATGCGAGGAATAACTTCTTACCTTTTTTGGCTGAGTCCTCCTTTTACTATGTAACTAGGTCAAGTATATTTGAGTTCTGCTTTCCAGCCTTCGAGTTCTGTTTCCCGTTGTTGCATGCAAGCCTAAAGAGATCGAATCCTTGTGCTCCTCCCCTTTTTTCTCTGTATTGAAACTTGCAATTGTTGAGCTACTGCTAGCAAAACCTCTCCACAATTCTAAGTTGAGGGTTTTTAATTTATTTACTTTTAATGTCTAGCTGTGTAGGTACTATGACTTAGAAAAACATTTGGATGACAGATAATTTAATCTTAAAGAATTGCTGCTTAATTGATTGTGTCTTGTTTCTTTAAAAGTTAATCACCCTTCCTCTTTCTATTGCTTTCTAATAGGTTTCAAATATGTTGCCTCTCTTGAAGCGTGGAATAGGGGTCCACCATTCTGGCTTGCTCCCTATTTTGAAGGAAGTGATTGAGATATTATTTCAAGAAGGGCTAATCAAGGTTAGAATTAAGGCGCTAGAAAGAAATATATTTATTTGTTTGCTGTGTGTTTGTCATATAATCTGATTGATTGCTGTCTCCCATGGTTCCGGTATTGTAATTGTGTTGGGTGCGAGTTGTAACCTCATTTTATTAACCATTATTAAGGCAAGAGAAAGGTGCCTCATTCCAGGAAGGTGCCTACCTTTTGTCTTTCTACCCTGCCTTAGTTCTCTTCTTCTTCTTCCTCTTCATCTGCTTTAGTTCTTTTTCCTTTGATGAAATAGTTTCTTATCTGATGTAATTAGTTGGTGATAAAGTCCCTTTTTACTTTCGGGTAAAGGTTTTAGTTTTTTACTCTGTTTTTATTTTTTGCTCTCTGTTTTTACAGCAGGTAGTTTTAAAGTTTTTTAGTTATTTATTTTTAGTTATCCTTTTAGAATCTCTCAAAGGCTGGTTTGTAGCCTTTAAATAGGGGTCCCTAGGTTGTAAGAGGTATTATTTCTAAGACTAATAAATGAGTTCTTCAAGAATTCTCGAAGATTGTGTTCAAGAAATTAGTTTTTCACTTATCCTCAAGTAAAAAAATTAATAACAAGTAAAATAAAATAAGAAAGAAACAGAAAGTATGACACTTTGTACACTACACTTCAACTGCTACTGATTTACTTTTTGTCATGATTCTTTTTCTAATTAGAATGCATTTAAAGAGCAAATCAAATAAACATTCTTATCTTTTACACTGTAAAATATTCGATTTCTTTTTGTCATGTTATATTTTAATTCCTTGGTCATTAAAACATTGTCTTTAGTGTTTGTTTGCCACAGAGACCTTCAGCATTGGTTTAAACATGCCTGCAAAAACTGTTGTGTTCAGTAATGTTCGCAAGTTTGATGGGGATAAATTTAGATGGTTATCAAGTGGTGAATATATACAAATGAGTGGTCGAGCTGGACGGAGAGGAATTGATAAGCGTGGGATATGTATCCTTATGGTGGACGAGAAGCTGGAACCTTCAACTGCTAAAATGATGCTTAAAGGAAATGCGGATTGCTTGAACAGGTAGCTACAGTATGGTTTCACCATTCAGTATGTCGGAATCAATTATGCTGTCATAAACCTTTGATATGTTAGCTGCTGATATGCTATGTTAGGAAGTACAGGAAAACAGTATAGAATGTTGCAAGTATTCTTCCTATTCTCACTTTATTAGAAGGGGGATTTTTCCCCCCAAATGTAATTAATAAAAAATATCTGAGGAGGAAAAAGTGCATTTGCACTCATTTCAATAAATTTGCTTTTTAATTTCAAAAAGTTAAAGAATAATTATGGAAACTGCAGCATCAAGGGAAGAACATTGAGAGTTTCTAGAGGATACAGGGCATTCTAGGCACTTGATAATTGGTTCAAATTTCCCTCATTATGGAACTGGTAAACAATAGTCCAAAGAGTAAATTAGTTGCTAAGCAGAAATGTCAGCCATTAAGCTACCCGGCTAGCCAAGATGTACGATAGATGAAATCACGTTATGCATCTTATTCTTTCATTTTTTCTCAATAAAAGTTGTTGCTTTCTATAAAAGAAAATAGATGAGGTCAATTTGTATCTAATTGTGCTGGTAGGGTTGTGCATCTGAGCGTTACCATGTTCACAACCTTATTTTTTACTATTCCGTTGTTTAAATAAGTTGCTCTGACATCTTATCCTTTTTTTTTTTCTCATTTTAGTGCTTTTCACTTGAGCTATAACATGCTCTTGAATCAAATCCGTTCTGAAGATGGCGATCCTGAAAATCTGCTGCGTAATTCCTTCTATCAGTTCCAAGCCGACCGCAACATACCCAACCTCGAGGTTAGTTTTTCCAGATAAGGTGTCATGTAAAGAAAGAATTTAATTGAAACGAAGAGAATCAATTCTGGGCAACTGCAAATGGAATCAAAGATCTTTAACAGGAAATGGTGAAATAATGCGTTAGCATGATTTTATTTAATGTTTTGCATCCTTTAAAATTAGTTTATCACTGAGCTCTTTGAATATTATTTGTACAACGTTGCATGGAGGAACTATTCATATTTTTACCATTAACCTCTGTGATTTTTATTTGTTGAATATGGGAAAGATATGCAACTTATCTAGTTATCTTCTTACCTATAATTCTTTGACGATTGACTTTTCCTCTGATGATGAAACCAGTATGGTTAGTTTGCTGAGATGAGAATGCTGCTCTAGTAATTGTATAATTTGAAAAGAATCTGCTTTTCATATCAAATTTTTGCTCATGTTAGAAACGCTACTCTGATTGCTGTATAGGTTCTCTCAAGAATTGAAAAAATACTCCGATTTGTGGCAGTAGCAAAGGGGTTAGTTAGCCTAGGAATTACCTAATATTAGCCTAATTTTCCCTAATTCTCCCTACATTACTATGTCTACTTAATAGCTGTACCGTATTATCCTTTGTGGAGGATCCTATAACACATGGAAGATCAAACCATATTGTGGTGTAATGTTTAAGGTAAGATTACATACTAATTCTAGTTATTACTGCAGAAACGAGTGAAAAGCCTTGAAGAGGAGAGGGATTCCATTGTGATTGAAGAGGAAGATAATTTGAAGAATTATTATGATTTGCTAAAGCAGTACAAAAGTTTAAAGAAGGATATTCGTGATATTGTACTGTCTCCTAGATACTGCTTACCATTTCTGCAACCTGGCAGGCTTGTATCTATTGAATGCAACAGCAATGATGAGATTTCTTCAACTTTTTCCATTAAGGACCAGGTTACGTGGGGATTGATAATTAATTTTCAAAGGGTGAAAGGTGTTTCTGAAGGTGATGTATCGATAATTTCTCTTGCATTTATATTCTTTAATTCAAAATTTAGCTTATTAGTCTTCTTCTGAATCTGAACTTTAATTTTTGTTGCAGATGATGCTAGCATGAAACCAGAATCTGCAAACTACACTGTGGACATTCTTACAAGATGCATTGTCAGTAAAGATGGCATTGGGAAAAAGAATGTTAAGATCGTTCAATTGAAAGAGCATGGAGAACCCCATGTTGTTTCCATTCCAATATCTCAGGTATTTGAGTTAGATGATCTACTGTATGCACATGCTTCATGTGAACTGTTAGTAGAGAATTAGAAATATTAGATCTCTTCCTGATAGAGAATACTAGAGATCAAAGATTATTAAGATTGAGAGTGACAAAAGATCTAGATTAAAGTTCAAAATCAAACATTAAATTGATATTGTATTAATAAAGACATGTTTCAGAGCATTTTTTAACGTGATAAAAGTGATTTTGGCCATTTTAAAATCACTCCTAAATATACACTAATTTGTTTTAATTATTCTCAGCTTATGTCAACTGCCGTCTTGATTTAATTAATTTTATTTCTTGTTTATGACACAGATCAGTACTTTAGCTAGCATTCGTATACTCATACCGAATGATCTTTTGCCGCTGGAAGCTCGAGAAAATACATTGAAGAAGATTTCTGAAGTTCTATCAAGATTTCCAAAGGGAGTGCCCCTTCTAGATCCAGAAGAGGATATGAAAGTACGTAACACTATGCTAATACTTTTTTTTTTGTTGATGTGAGGATTTCTTTTCTATTAGATTGAAGTCTATGGGATTCATGTGTATAATCTTTGGTGGTACTTGGGTTAGTATAGCAAAATCTCTAAGCTCAAATTATAATTTAGTCCATAAACTTTTAAGTTTGTGTTTATTTGGTCCATGGACTTTAAAAAGTGTCTAGTAGGTCCTTTGAGGTCCTTTAAAATTTCAATGTGTCCAATAAGTCCCTAAACTTTCAATTAATGGACCCCTTATACACAAAATTGAAAGTTTGTTCTATTACTCATAAAATTCAATTTGAAGGCTAATAGTTAAAGTCAATTTTTAACAATTTCAATATTTATGTGAAATCACTGATTGACCAAACTGATGAGTGAGGGTAAATTTAATATTATATCAATACTCTCACACTCCCCCACTTGTGGGCTTGAGATTTGTAGAAGACAAAACAAGTGGAAATCAATATTAATTGGAGAGGTAATGACATTGCAGGGTACCATGTTAAATCACTGATTGACCCAAAAGTTTAAGCTAATGGGCGAAGGTAAATTTAATATTATATTACTCTCACAATTTCGAAAACCGGTTAGGCACAAAATTGTAAGTTTGGGGACTTGTTAGTCATTTTTAAAGTTTAGAAACCCATTAGATACAAAATTGAAAGTTTGGAGACCTATTAAGCATTCTTTAAAGTTTAGCGACCTTTTGAAACAAACTTGAAAGCTCAAGGACTAAACTTATAATTTAATTGATCTGTAATTGAATTCCTTTGTCCATTAGCAAAAAAAAAAACCGACTCTGATTCTGTTTGAGCATTTGCTGAATGGAAGTATAATCTAGCATCTATTTGCCTCTGCCATGCGTTCTTTCTAGATTTTAATTTTTTACTTCAATTGATTTTCAGATCCAAAGTAGTTCATACAGAAAGGCCGTGCGTAGAACAGAGGCTTTGGAGAGCCTCTTTGACAAGCATGAGGCGGCAAAATCGACACTTGTTGAGCAGAAGCTCAAAGCATTACATTTGAAGCAAGAGTTAACAGCTAAAATTAGATCAATTAAGAAAACATTGCGTTCTTCTTCTGCATTGGCTTTCAAAGATGAACTGAAGGCCAGGAAACGAGTATTGCGGAGGCTTGGGTAATTGATCTTTTTTCTTCTCTAGCAACTCTTTGGGTTGGATATATACATACACACACACACACACACACACACACACACACACACACACACATGATAAGTCACCAAATAGGTACATGTTTATTATAGCGATGATTAAAAAAGTTTGGCATAGTTTGTTCAATTAATTCCAAATAATCTGTTTCTACGGGAGAATTCATCTACTGCAGCTAAATTCATTTTGTTACTTAGCGTATGAGCTCCCCTTCTGGACATATCATTTTATCAATAAAATTGTTCTTTGTAACAAATGTTTTTCTAGATGTAGATGGTAAATGTTGAAAACTGTATTGTTTACTTAGTTAATTCTGAATAATTTATTTTATTTCAAACAAGGTTACACTCCCAAAATGATTTGTTTAGAATGTCATTTCACAATCTTTTATGCAAAAAGTAGAGATTTACATAGTTGTTTGACTCCATCCTTAATGACATGTAATAAAAAGGATCATATTTGATTTCGACCTTCCAAATTGCTGAGTGCAGTTAAATTCTAAGAATCTGGTGTGTTATGTGAAAGGAAGTCTCTGTCTATAATTCATTGTCATGTACCAAGGATTCAGAATAGTCTGGTTGCCGGTTCAAATTGATCATTTAGATTTCATGGCAGAGTTGCAATTTCGTCCATTGTAGATGCATTGACTTAGCAGTATCTTATTTTTATTTCCTTTCTCCCACGTTGCAGTTACATATCGAGTGATGATGTCGTGGAGTTGAAAGGCAAGGTTGCTTGTGAAATCAGTAGTGCAAATGAATTGACTCTTTCAGAGCTGATGTTCAATGGGATTTTCAAGGACATAAAAGTGGAGGAAGTTGTTGCTCTGCTATCTTGTTTTGTGTGGCAAGAGAAACTTCAGGATGCAGCAAAGCCTAGGGAAGAGCTTGAGCTGCTTTTCATTCAATTACAAGACACAGCCCGAAGGGTTGCTAAGGTTCAGCTTGAATGCAAGGTTAGCGCAAGTTCTTAATTTGTCCGAGTTGATTTACTCGATCCTTTTTGTTTACTCTCACGTTGAGTTTTAGGTTTTGTTCACTATAATTTTTTAATATATTTGTAAATCAATGGATAAGGCACCTATTACTTCTATTACTTTTATTAGGTTGAAGCATTAACCCATCATCCTCCTTTGAACTCAATATGTATATATAAATAAATAAATCCATTTGATGATGTTGATTTACTGTTGTTCGCAATTTAGATAAATAAAACTTCTTGAATAACTGAATCTCATTTTGACTCTTAGGTGGGGAGGATTTCTTGTTATCCCCATTTTTGTAAATACTCGTTCTTTATTGAGGTGATTTGTGCTTCTTTATATAAAAAAGCTCTCTTGGAAAACCATTAAAATGGAAAAAGTTAGTTTCATTCATATCGAGTTTTTTTGTTTAGAGAGGGAGTCATTGGTTACATTAAGAAGAGCATGCTTGATGATAGATGCATGTCAAATTGCAGGTCGAAATTGATGTAGAAGGTTTTGTGAATTCATTTAGACCAGATATTATGGAGGCTGTTTATGCTTGGGCAAAAGGCTCCAAATTCTATGAGATAATGGAAATAACACAGGTATTTGAGGGGAGCTTGATTAGAGCAATTAGAAGACTGGAAGAAGTTCTTCAACAACTTATACTAGCAGCAAAGTCCATTGGTGAAACTGAACTTGAAACCAAGTTTGAAGAGGCTGTTTCCAAAATCAAGAGGGATATTGTCTTTGCTGCTTCTTTGTACTTGTAGTAGTTTTCCTTATCTTTTTAATTTTAATTTTTGTATAACATCGAGTTGTTATTTATAATTATATGCGGCTCTTTGTAAAGTTTCTTATATTCATTTTATTGTTAAAACTATATATTAATGTCATTTATATATGATGGAAATGTCTTGCTGGTAGTAGTACCGCCAGATGTTTTCATTTATTG

mRNA sequence

GTGGATTTTTAGTGTGATACTCAAAACCTCAAAGGCTCAAACCCCAAATGTAGACTGGCGAAGACAAAAATGAGAATCCCGTTGTTGAGAAGAATCGTACACAAAATTTCGGTTAAACAAATTGGCGCGCCGTTTACTCCTTCTTAGGGTTTATTCAGAGAGAAAAACCCTTGAGAGAGTCTGCTTTTGGGTTTTGATACTCACCAAATCCATAACCCTGCTCGCCAATTCGGTTGCATCCCTCCTCAATTCCAAGCTGCCATGGGCTCTTCGAAGAGAAAGCTGGTCGACGATGCGCCCAGACAATCTTCGCCGAAGCAACACAGAGCCAATGCCCGTGCCAATGTTGAAGACGAACCAGTTGCGTGTGTTCATGATGTCTCCTACCCCGAGGGTTCTTTTAATCCTCTCCCATCTTCAAGTATCTCTTCCACTGGAGAGAAGTTGGAACCGGCTAAGGTCTTCCCTTTCTCTCTGGACCCCTTTCAGTCTGAGGCTATCAAGTGCTTGGAAACTGGAGAATCTGTCATGGTGTCTGCCCATACATCAGCTGGTAAAACTGTTGTGGCATTGTATGCAATTGCCATGTCTCTCCGGAATAAACAGCGTGTCATATACACCTCACCAATCAAGGCCCTCAGCAACCAAAAATATAGGGAATTTAAAGAAGAATTCTCAGATGTTGGTTTAATGACTGGGGATGTGACAATTGATCCAAATGCTTCTTGTCTGGTCATGACCACAGAAATTTGGCGTAGCATGCAGTACAAAGGATCAGAGGTTACACGGGAAGTGGCATGGATTATTTTTGATGAAGTACATTACATGCGTGATCGGGAGCGAGGTGTTGTTTGGGAAGAGAGCATTGTCATGGCTCCAAAGAATGCTAGATTTGTTTTCCTCTCAGCAACTGTACCAAATGCAAAAGAATTTGCTGATTGGGTTGCAAAGGTCCACCACCAACCATGTCATATTGTTTATACTGACTATCGGCCAACACCTCTTCAACACTATATTTTCCCATCTGGGGGTGAAGGCTTATACTTGGTGGTTGATGAAAAGGGGCATTTTCGGGAGGATAGCTTTCAAAAAGCTTTAAATGCACTTGTCCCTGTTAGTGATAGTGACAAGAAAAAGGAGAATAATGGGAAGTGGCAGAAGAGTTTGACTTTGGGCAAAACAGGTGAAGAGAGTGATATATTTAAGATGGTGAAGATGATAATTCAACGTCAATATGATCCTGTTATACTTTTCAGCTTTAGCAAAAGAGAATGTGAATTTCTTGCAATGCAGATGGCAAAACTGGATCTAAATGGTGATGACGAAAAGGCGAACATAGAAACCATCTTTTGGAGTGCGATGGATATGCTTTCAGATGATGATAAAAAGCTCCCTCAGGCAAGCCACTCATTTTCCGTTTCAAATATGTTGCCTCTCTTGAAGCGTGGAATAGGGGTCCACCATTCTGGCTTGCTCCCTATTTTGAAGGAAGTGATTGAGATATTATTTCAAGAAGGGCTAATCAAGTGTTTGTTTGCCACAGAGACCTTCAGCATTGGTTTAAACATGCCTGCAAAAACTGTTGTGTTCAGTAATGTTCGCAAGTTTGATGGGGATAAATTTAGATGGTTATCAAGTGGTGAATATATACAAATGAGTGGTCGAGCTGGACGGAGAGGAATTGATAAGCGTGGGATATGTATCCTTATGGTGGACGAGAAGCTGGAACCTTCAACTGCTAAAATGATGCTTAAAGGAAATGCGGATTGCTTGAACAGTGCTTTTCACTTGAGCTATAACATGCTCTTGAATCAAATCCGTTCTGAAGATGGCGATCCTGAAAATCTGCTGCGTAATTCCTTCTATCAGTTCCAAGCCGACCGCAACATACCCAACCTCGAGAAACGAGTGAAAAGCCTTGAAGAGGAGAGGGATTCCATTGTGATTGAAGAGGAAGATAATTTGAAGAATTATTATGATTTGCTAAAGCAGTACAAAAGTTTAAAGAAGGATATTCGTGATATTGTACTGTCTCCTAGATACTGCTTACCATTTCTGCAACCTGGCAGGCTTGTATCTATTGAATGCAACAGCAATGATGAGATTTCTTCAACTTTTTCCATTAAGGACCAGGTTACGTGGGGATTGATAATTAATTTTCAAAGGGTGAAAGGTGTTTCTGAAGATGATGCTAGCATGAAACCAGAATCTGCAAACTACACTGTGGACATTCTTACAAGATGCATTGTCAGTAAAGATGGCATTGGGAAAAAGAATGTTAAGATCGTTCAATTGAAAGAGCATGGAGAACCCCATGTTGTTTCCATTCCAATATCTCAGATCAGTACTTTAGCTAGCATTCGTATACTCATACCGAATGATCTTTTGCCGCTGGAAGCTCGAGAAAATACATTGAAGAAGATTTCTGAAGTTCTATCAAGATTTCCAAAGGGAGTGCCCCTTCTAGATCCAGAAGAGGATATGAAAATCCAAAGTAGTTCATACAGAAAGGCCGTGCGTAGAACAGAGGCTTTGGAGAGCCTCTTTGACAAGCATGAGGCGGCAAAATCGACACTTGTTGAGCAGAAGCTCAAAGCATTACATTTGAAGCAAGAGTTAACAGCTAAAATTAGATCAATTAAGAAAACATTGCGTTCTTCTTCTGCATTGGCTTTCAAAGATGAACTGAAGGCCAGGAAACGAGTATTGCGGAGGCTTGGTTACATATCGAGTGATGATGTCGTGGAGTTGAAAGGCAAGGTTGCTTGTGAAATCAGTAGTGCAAATGAATTGACTCTTTCAGAGCTGATGTTCAATGGGATTTTCAAGGACATAAAAGTGGAGGAAGTTGTTGCTCTGCTATCTTGTTTTGTGTGGCAAGAGAAACTTCAGGATGCAGCAAAGCCTAGGGAAGAGCTTGAGCTGCTTTTCATTCAATTACAAGACACAGCCCGAAGGGTTGCTAAGGTTCAGCTTGAATGCAAGGTCGAAATTGATGTAGAAGGTTTTGTGAATTCATTTAGACCAGATATTATGGAGGCTGTTTATGCTTGGGCAAAAGGCTCCAAATTCTATGAGATAATGGAAATAACACAGGTATTTGAGGGGAGCTTGATTAGAGCAATTAGAAGACTGGAAGAAGTTCTTCAACAACTTATACTAGCAGCAAAGTCCATTGGTGAAACTGAACTTGAAACCAAGTTTGAAGAGGCTGTTTCCAAAATCAAGAGGGATATTGTCTTTGCTGCTTCTTTGTACTTGTAGTAGTTTTCCTTATCTTTTTAATTTTAATTTTTGTATAACATCGAGTTGTTATTTATAATTATATGCGGCTCTTTGTAAAGTTTCTTATATTCATTTTATTGTTAAAACTATATATTAATGTCATTTATATATGATGGAAATGTCTTGCTGGTAGTAGTACCGCCAGATGTTTTCATTTATTG

Coding sequence (CDS)

ATGGGCTCTTCGAAGAGAAAGCTGGTCGACGATGCGCCCAGACAATCTTCGCCGAAGCAACACAGAGCCAATGCCCGTGCCAATGTTGAAGACGAACCAGTTGCGTGTGTTCATGATGTCTCCTACCCCGAGGGTTCTTTTAATCCTCTCCCATCTTCAAGTATCTCTTCCACTGGAGAGAAGTTGGAACCGGCTAAGGTCTTCCCTTTCTCTCTGGACCCCTTTCAGTCTGAGGCTATCAAGTGCTTGGAAACTGGAGAATCTGTCATGGTGTCTGCCCATACATCAGCTGGTAAAACTGTTGTGGCATTGTATGCAATTGCCATGTCTCTCCGGAATAAACAGCGTGTCATATACACCTCACCAATCAAGGCCCTCAGCAACCAAAAATATAGGGAATTTAAAGAAGAATTCTCAGATGTTGGTTTAATGACTGGGGATGTGACAATTGATCCAAATGCTTCTTGTCTGGTCATGACCACAGAAATTTGGCGTAGCATGCAGTACAAAGGATCAGAGGTTACACGGGAAGTGGCATGGATTATTTTTGATGAAGTACATTACATGCGTGATCGGGAGCGAGGTGTTGTTTGGGAAGAGAGCATTGTCATGGCTCCAAAGAATGCTAGATTTGTTTTCCTCTCAGCAACTGTACCAAATGCAAAAGAATTTGCTGATTGGGTTGCAAAGGTCCACCACCAACCATGTCATATTGTTTATACTGACTATCGGCCAACACCTCTTCAACACTATATTTTCCCATCTGGGGGTGAAGGCTTATACTTGGTGGTTGATGAAAAGGGGCATTTTCGGGAGGATAGCTTTCAAAAAGCTTTAAATGCACTTGTCCCTGTTAGTGATAGTGACAAGAAAAAGGAGAATAATGGGAAGTGGCAGAAGAGTTTGACTTTGGGCAAAACAGGTGAAGAGAGTGATATATTTAAGATGGTGAAGATGATAATTCAACGTCAATATGATCCTGTTATACTTTTCAGCTTTAGCAAAAGAGAATGTGAATTTCTTGCAATGCAGATGGCAAAACTGGATCTAAATGGTGATGACGAAAAGGCGAACATAGAAACCATCTTTTGGAGTGCGATGGATATGCTTTCAGATGATGATAAAAAGCTCCCTCAGGCAAGCCACTCATTTTCCGTTTCAAATATGTTGCCTCTCTTGAAGCGTGGAATAGGGGTCCACCATTCTGGCTTGCTCCCTATTTTGAAGGAAGTGATTGAGATATTATTTCAAGAAGGGCTAATCAAGTGTTTGTTTGCCACAGAGACCTTCAGCATTGGTTTAAACATGCCTGCAAAAACTGTTGTGTTCAGTAATGTTCGCAAGTTTGATGGGGATAAATTTAGATGGTTATCAAGTGGTGAATATATACAAATGAGTGGTCGAGCTGGACGGAGAGGAATTGATAAGCGTGGGATATGTATCCTTATGGTGGACGAGAAGCTGGAACCTTCAACTGCTAAAATGATGCTTAAAGGAAATGCGGATTGCTTGAACAGTGCTTTTCACTTGAGCTATAACATGCTCTTGAATCAAATCCGTTCTGAAGATGGCGATCCTGAAAATCTGCTGCGTAATTCCTTCTATCAGTTCCAAGCCGACCGCAACATACCCAACCTCGAGAAACGAGTGAAAAGCCTTGAAGAGGAGAGGGATTCCATTGTGATTGAAGAGGAAGATAATTTGAAGAATTATTATGATTTGCTAAAGCAGTACAAAAGTTTAAAGAAGGATATTCGTGATATTGTACTGTCTCCTAGATACTGCTTACCATTTCTGCAACCTGGCAGGCTTGTATCTATTGAATGCAACAGCAATGATGAGATTTCTTCAACTTTTTCCATTAAGGACCAGGTTACGTGGGGATTGATAATTAATTTTCAAAGGGTGAAAGGTGTTTCTGAAGATGATGCTAGCATGAAACCAGAATCTGCAAACTACACTGTGGACATTCTTACAAGATGCATTGTCAGTAAAGATGGCATTGGGAAAAAGAATGTTAAGATCGTTCAATTGAAAGAGCATGGAGAACCCCATGTTGTTTCCATTCCAATATCTCAGATCAGTACTTTAGCTAGCATTCGTATACTCATACCGAATGATCTTTTGCCGCTGGAAGCTCGAGAAAATACATTGAAGAAGATTTCTGAAGTTCTATCAAGATTTCCAAAGGGAGTGCCCCTTCTAGATCCAGAAGAGGATATGAAAATCCAAAGTAGTTCATACAGAAAGGCCGTGCGTAGAACAGAGGCTTTGGAGAGCCTCTTTGACAAGCATGAGGCGGCAAAATCGACACTTGTTGAGCAGAAGCTCAAAGCATTACATTTGAAGCAAGAGTTAACAGCTAAAATTAGATCAATTAAGAAAACATTGCGTTCTTCTTCTGCATTGGCTTTCAAAGATGAACTGAAGGCCAGGAAACGAGTATTGCGGAGGCTTGGTTACATATCGAGTGATGATGTCGTGGAGTTGAAAGGCAAGGTTGCTTGTGAAATCAGTAGTGCAAATGAATTGACTCTTTCAGAGCTGATGTTCAATGGGATTTTCAAGGACATAAAAGTGGAGGAAGTTGTTGCTCTGCTATCTTGTTTTGTGTGGCAAGAGAAACTTCAGGATGCAGCAAAGCCTAGGGAAGAGCTTGAGCTGCTTTTCATTCAATTACAAGACACAGCCCGAAGGGTTGCTAAGGTTCAGCTTGAATGCAAGGTCGAAATTGATGTAGAAGGTTTTGTGAATTCATTTAGACCAGATATTATGGAGGCTGTTTATGCTTGGGCAAAAGGCTCCAAATTCTATGAGATAATGGAAATAACACAGGTATTTGAGGGGAGCTTGATTAGAGCAATTAGAAGACTGGAAGAAGTTCTTCAACAACTTATACTAGCAGCAAAGTCCATTGGTGAAACTGAACTTGAAACCAAGTTTGAAGAGGCTGTTTCCAAAATCAAGAGGGATATTGTCTTTGCTGCTTCTTTGTACTTGTAG

Protein sequence

MGSSKRKLVDDAPRQSSPKQHRANARANVEDEPVACVHDVSYPEGSFNPLPSSSISSTGEKLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYTSPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAWIIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHHQPCHIVYTDYRPTPLQHYIFPSGGEGLYLVVDEKGHFREDSFQKALNALVPVSDSDKKKENNGKWQKSLTLGKTGEESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKLDLNGDDEKANIETIFWSAMDMLSDDDKKLPQASHSFSVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRGICILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRSEDGDPENLLRNSFYQFQADRNIPNLEKRVKSLEEERDSIVIEEEDNLKNYYDLLKQYKSLKKDIRDIVLSPRYCLPFLQPGRLVSIECNSNDEISSTFSIKDQVTWGLIINFQRVKGVSEDDASMKPESANYTVDILTRCIVSKDGIGKKNVKIVQLKEHGEPHVVSIPISQISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHEAAKSTLVEQKLKALHLKQELTAKIRSIKKTLRSSSALAFKDELKARKRVLRRLGYISSDDVVELKGKVACEISSANELTLSELMFNGIFKDIKVEEVVALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRVAKVQLECKVEIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELETKFEEAVSKIKRDIVFAASLYL
Homology
[Close]
BLAST of Clc06G03460 vs. NCBI nr
Match: XP_038874774.1 (DExH-box ATP-dependent RNA helicase DExH9 isoform X1 [Benincasa hispida])

HSP 1 Score: 1880.9 bits (4871), Expect = 0.0e+00
Identity = 966/1000 (96.60%), Postives = 980/1000 (98.00%), Query Frame = 0 

Query: 1    MGSSKRKLVDDAPRQSSPKQHRANARANVEDEPVACVHDVSYPEGSFNPLPSSSISSTGE 60
            MGSSKRK V++ PRQ SPKQHR N  A VEDEPVAC+HDVSYPEGSFNPLPSSS+SST E
Sbjct: 1    MGSSKRKQVENPPRQPSPKQHRTNGPAIVEDEPVACIHDVSYPEGSFNPLPSSSLSSTAE 60

Query: 61   KLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT 120
            KLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT
Sbjct: 61   KLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT 120

Query: 121  SPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAW 180
            SPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAW
Sbjct: 121  SPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAW 180

Query: 181  IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHHQPCHIVY 240
            IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVH QPCHIVY
Sbjct: 181  IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHQQPCHIVY 240

Query: 241  TDYRPTPLQHYIFPSGGEGLYLVVDEKGHFREDSFQKALNALVPVSDSDKKKENNGKWQK 300
            TDYRPTPLQHYIFPSGGEGLYLVVDEKGHFREDSFQKALNALVPVSD DKK+ENNGKWQK
Sbjct: 241  TDYRPTPLQHYIFPSGGEGLYLVVDEKGHFREDSFQKALNALVPVSDGDKKRENNGKWQK 300

Query: 301  SLTLGKTGEESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKLDLNGDDEKANIE 360
            SLTLGKTGEESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKLDLNGDDEK NIE
Sbjct: 301  SLTLGKTGEESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKLDLNGDDEKVNIE 360

Query: 361  TIFWSAMDMLSDDDKKLPQASHSFSVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL 420
            TIFWSAMDMLSDDDKKLPQ      VSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL
Sbjct: 361  TIFWSAMDMLSDDDKKLPQ------VSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL 420

Query: 421  IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRGIC 480
            IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGID+RGIC
Sbjct: 421  IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDERGIC 480

Query: 481  ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRSEDGDPENLLRNSFYQFQAD 540
            ILMVDEKLEPSTAK MLKGNADCLNSAFHLSYNMLLNQIRSEDG+PENLLRNSFYQFQAD
Sbjct: 481  ILMVDEKLEPSTAKTMLKGNADCLNSAFHLSYNMLLNQIRSEDGNPENLLRNSFYQFQAD 540

Query: 541  RNIPNLEKRVKSLEEERDSIVIEEEDNLKNYYDLLKQYKSLKKDIRDIVLSPRYCLPFLQ 600
            RNIPNLEK+VKSLEEERDSIVIEEEDNLKNYYDLLKQYKSLKKDIRDIVLSPRYCLPFLQ
Sbjct: 541  RNIPNLEKQVKSLEEERDSIVIEEEDNLKNYYDLLKQYKSLKKDIRDIVLSPRYCLPFLQ 600

Query: 601  PGRLVSIECNSNDEISSTFSIKDQVTWGLIINFQRVKGVSEDDASMKPESANYTVDILTR 660
            PGRLVSIECNSNDEISSTFSIKDQVTWGLIINFQRVKGVSE+DASMKPESANY+VD+LTR
Sbjct: 601  PGRLVSIECNSNDEISSTFSIKDQVTWGLIINFQRVKGVSEEDASMKPESANYSVDVLTR 660

Query: 661  CIVSKDGIGKKNVKIVQLKEHGEPHVVSIPISQISTLASIRILIPNDLLPLEARENTLKK 720
            CIVSKDGIGKKNVKIV+LKEHGEPHVVSIPISQISTLASIRILIPNDLLPLEARENTLKK
Sbjct: 661  CIVSKDGIGKKNVKIVRLKEHGEPHVVSIPISQISTLASIRILIPNDLLPLEARENTLKK 720

Query: 721  ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHEAAKSTLVEQKLKAL 780
            ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHE AKSTLVEQKLKAL
Sbjct: 721  ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHEVAKSTLVEQKLKAL 780

Query: 781  HLKQELTAKIRSIKKTLRSSSALAFKDELKARKRVLRRLGYISSDDVVELKGKVACEISS 840
            HLKQELTAKIRSIKKTLRSSSALAFKDELKARKRVLRRLGYI+SDDVVELKGKVACEISS
Sbjct: 781  HLKQELTAKIRSIKKTLRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISS 840

Query: 841  ANELTLSELMFNGIFKDIKVEEVVALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV 900
            ANELTLSELMFNG+FKDIKVEEVVALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV
Sbjct: 841  ANELTLSELMFNGVFKDIKVEEVVALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV 900

Query: 901  AKVQLECKVEIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE 960
            AKVQLECKVEIDVEGFVNSFRPDIMEAVY WAKGSKFYEIMEITQVFEGSLIRAIRRLEE
Sbjct: 901  AKVQLECKVEIDVEGFVNSFRPDIMEAVYGWAKGSKFYEIMEITQVFEGSLIRAIRRLEE 960

Query: 961  VLQQLILAAKSIGETELETKFEEAVSKIKRDIVFAASLYL 1001
            VLQQLILAAKSIGETELETKFEEAVSKIKRDIVFAASLYL
Sbjct: 961  VLQQLILAAKSIGETELETKFEEAVSKIKRDIVFAASLYL 994

[Close]
BLAST of Clc06G03460 vs. NCBI nr
Match: XP_008458145.1 (PREDICTED: DExH-box ATP-dependent RNA helicase DExH9 [Cucumis melo] >TYK14014.1 DExH-box ATP-dependent RNA helicase DExH9 [Cucumis melo var. makuwa])

HSP 1 Score: 1871.3 bits (4846), Expect = 0.0e+00
Identity = 957/1000 (95.70%), Postives = 979/1000 (97.90%), Query Frame = 0 

Query: 1    MGSSKRKLVDDAPRQSSPKQHRANARANVEDEPVACVHDVSYPEGSFNPLPSSSISSTGE 60
            MGSSKRKLV+D  RQ+SPKQHR N  A VE EPVAC+HDVSYPEGSFNPLPSSS+SSTGE
Sbjct: 1    MGSSKRKLVEDDSRQASPKQHRTNVPAIVEHEPVACLHDVSYPEGSFNPLPSSSLSSTGE 60

Query: 61   KLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT 120
            KLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT
Sbjct: 61   KLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT 120

Query: 121  SPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAW 180
            SPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAW
Sbjct: 121  SPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAW 180

Query: 181  IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHHQPCHIVY 240
            IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVH QPCHIVY
Sbjct: 181  IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHQQPCHIVY 240

Query: 241  TDYRPTPLQHYIFPSGGEGLYLVVDEKGHFREDSFQKALNALVPVSDSDKKKENNGKWQK 300
            TDYRPTPLQHYIFPSG EGLYLVVDEKGHFREDSFQ+ALNALVPVSD DKKKENNGKWQK
Sbjct: 241  TDYRPTPLQHYIFPSGSEGLYLVVDEKGHFREDSFQRALNALVPVSDGDKKKENNGKWQK 300

Query: 301  SLTLGKTGEESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKLDLNGDDEKANIE 360
            SLTLGKTGEESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKLDLNGDDEK NIE
Sbjct: 301  SLTLGKTGEESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKLDLNGDDEKVNIE 360

Query: 361  TIFWSAMDMLSDDDKKLPQASHSFSVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL 420
            TIFWSAMDMLSDDDKKLPQ      VSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL
Sbjct: 361  TIFWSAMDMLSDDDKKLPQ------VSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL 420

Query: 421  IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRGIC 480
            IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRGIC
Sbjct: 421  IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRGIC 480

Query: 481  ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRSEDGDPENLLRNSFYQFQAD 540
            ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRSEDG+PENLLRNSFYQFQAD
Sbjct: 481  ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRSEDGNPENLLRNSFYQFQAD 540

Query: 541  RNIPNLEKRVKSLEEERDSIVIEEEDNLKNYYDLLKQYKSLKKDIRDIVLSPRYCLPFLQ 600
            RNIPNLEK+VKSLEEERDSIVIEEEDNLKNYYDLL QYKSLKKDIRDIVLSPRYCLPFLQ
Sbjct: 541  RNIPNLEKQVKSLEEERDSIVIEEEDNLKNYYDLLNQYKSLKKDIRDIVLSPRYCLPFLQ 600

Query: 601  PGRLVSIECNSNDEISSTFSIKDQVTWGLIINFQRVKGVSEDDASMKPESANYTVDILTR 660
            PGRLVSIECNSNDEISSTFSIKDQVTWGLIINFQ+VKGVSE+DASMKPESANYTVD+LTR
Sbjct: 601  PGRLVSIECNSNDEISSTFSIKDQVTWGLIINFQKVKGVSEEDASMKPESANYTVDVLTR 660

Query: 661  CIVSKDGIGKKNVKIVQLKEHGEPHVVSIPISQISTLASIRILIPNDLLPLEARENTLKK 720
            CIVSKDG+GKKNV+I+QLKEHGEPHVVSIPISQI+TLASIR+LIPNDLLPLEARENTLKK
Sbjct: 661  CIVSKDGVGKKNVRIIQLKEHGEPHVVSIPISQINTLASIRVLIPNDLLPLEARENTLKK 720

Query: 721  ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHEAAKSTLVEQKLKAL 780
            ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHE A+STLVE+KLKAL
Sbjct: 721  ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHEVARSTLVEEKLKAL 780

Query: 781  HLKQELTAKIRSIKKTLRSSSALAFKDELKARKRVLRRLGYISSDDVVELKGKVACEISS 840
            HLKQELTAKIRSIKK LRSSS LAFKDELKARKRVLRRLGYI+SDDVVELKGKVACEISS
Sbjct: 781  HLKQELTAKIRSIKKQLRSSSVLAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISS 840

Query: 841  ANELTLSELMFNGIFKDIKVEEVVALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV 900
            ANELTLSELMFNG+FKDIKVEE+VALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV
Sbjct: 841  ANELTLSELMFNGVFKDIKVEEIVALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV 900

Query: 901  AKVQLECKVEIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE 960
            AKVQLECKVEIDVEGFV+SFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE
Sbjct: 901  AKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE 960

Query: 961  VLQQLILAAKSIGETELETKFEEAVSKIKRDIVFAASLYL 1001
            VLQQLILA+KSIGETELETKFEEAVSKIKRDIVFAASLYL
Sbjct: 961  VLQQLILASKSIGETELETKFEEAVSKIKRDIVFAASLYL 994

[Close]
BLAST of Clc06G03460 vs. NCBI nr
Match: XP_004140482.1 (DExH-box ATP-dependent RNA helicase DExH9 [Cucumis sativus] >KGN46581.1 hypothetical protein Csa_004956 [Cucumis sativus])

HSP 1 Score: 1862.8 bits (4824), Expect = 0.0e+00
Identity = 954/1000 (95.40%), Postives = 975/1000 (97.50%), Query Frame = 0 

Query: 1    MGSSKRKLVDDAPRQSSPKQHRANARANVEDEPVACVHDVSYPEGSFNPLPSSSISSTGE 60
            MG SKRKL+DD  RQ SPKQHR N  A +E EPVAC+HDVSYPEGSFNPLPSSS+SSTGE
Sbjct: 1    MGPSKRKLLDDDSRQPSPKQHRTNVPAILEHEPVACLHDVSYPEGSFNPLPSSSLSSTGE 60

Query: 61   KLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT 120
            +LEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT
Sbjct: 61   ELEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT 120

Query: 121  SPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAW 180
            SPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAW
Sbjct: 121  SPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAW 180

Query: 181  IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHHQPCHIVY 240
            IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHHQPCHIVY
Sbjct: 181  IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHHQPCHIVY 240

Query: 241  TDYRPTPLQHYIFPSGGEGLYLVVDEKGHFREDSFQKALNALVPVSDSDKKKENNGKWQK 300
            TDYRPTPLQHYIFPSG EGLYLVVDEKGHFREDSFQKALNALVPVSD DKKKENNGKWQK
Sbjct: 241  TDYRPTPLQHYIFPSGSEGLYLVVDEKGHFREDSFQKALNALVPVSDGDKKKENNGKWQK 300

Query: 301  SLTLGKTGEESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKLDLNGDDEKANIE 360
            SLTLGKTGE+SDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKLDLNGDDEK NIE
Sbjct: 301  SLTLGKTGEDSDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKLDLNGDDEKVNIE 360

Query: 361  TIFWSAMDMLSDDDKKLPQASHSFSVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL 420
            TIFWSAMDMLSDDDKKLPQ      VSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL
Sbjct: 361  TIFWSAMDMLSDDDKKLPQ------VSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL 420

Query: 421  IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRGIC 480
            IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRGIC
Sbjct: 421  IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRGIC 480

Query: 481  ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRSEDGDPENLLRNSFYQFQAD 540
            ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRSEDG+PENLLRNSFYQFQAD
Sbjct: 481  ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRSEDGNPENLLRNSFYQFQAD 540

Query: 541  RNIPNLEKRVKSLEEERDSIVIEEEDNLKNYYDLLKQYKSLKKDIRDIVLSPRYCLPFLQ 600
            RNIPNLEK+VKSLEEERDSIVIEEED+LKNYYDLL QYKSLKKDIR+IVLSPRYCLPFLQ
Sbjct: 541  RNIPNLEKQVKSLEEERDSIVIEEEDSLKNYYDLLNQYKSLKKDIRNIVLSPRYCLPFLQ 600

Query: 601  PGRLVSIECNSNDEISSTFSIKDQVTWGLIINFQRVKGVSEDDASMKPESANYTVDILTR 660
            PGRLVSIECN NDEISSTFSIKDQVTWGLIINFQRVKGVSE+DASMKPESANYTVD+LTR
Sbjct: 601  PGRLVSIECNRNDEISSTFSIKDQVTWGLIINFQRVKGVSEEDASMKPESANYTVDVLTR 660

Query: 661  CIVSKDGIGKKNVKIVQLKEHGEPHVVSIPISQISTLASIRILIPNDLLPLEARENTLKK 720
            CIVSKDGIGKKNV+I+QLKEHGEPHVVSIPISQI+TLASIRILIPNDLLPLEARENTLKK
Sbjct: 661  CIVSKDGIGKKNVRIIQLKEHGEPHVVSIPISQINTLASIRILIPNDLLPLEARENTLKK 720

Query: 721  ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHEAAKSTLVEQKLKAL 780
            ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHE AKSTLVE+KLKAL
Sbjct: 721  ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHEVAKSTLVEEKLKAL 780

Query: 781  HLKQELTAKIRSIKKTLRSSSALAFKDELKARKRVLRRLGYISSDDVVELKGKVACEISS 840
            HLKQELTAKIRSIKK LRSSS LAFKDELKARKRVLRRLGY +SDDVVELKGKVACEISS
Sbjct: 781  HLKQELTAKIRSIKKQLRSSSVLAFKDELKARKRVLRRLGYTTSDDVVELKGKVACEISS 840

Query: 841  ANELTLSELMFNGIFKDIKVEEVVALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV 900
            ANELTLSELMFNG+FKD KVEE+VALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV
Sbjct: 841  ANELTLSELMFNGVFKDTKVEEIVALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV 900

Query: 901  AKVQLECKVEIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE 960
            AKVQLECKVEIDVEGFV+SFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE
Sbjct: 901  AKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE 960

Query: 961  VLQQLILAAKSIGETELETKFEEAVSKIKRDIVFAASLYL 1001
            VLQQLILA+KSIGETELETKFEEAVSKIKRDIVFAASLYL
Sbjct: 961  VLQQLILASKSIGETELETKFEEAVSKIKRDIVFAASLYL 994

[Close]
BLAST of Clc06G03460 vs. NCBI nr
Match: KAG6575215.1 (DExH-box ATP-dependent RNA helicase DExH9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1859.7 bits (4816), Expect = 0.0e+00
Identity = 950/1000 (95.00%), Postives = 975/1000 (97.50%), Query Frame = 0 

Query: 1    MGSSKRKLVDDAPRQSSPKQHRANARANVEDEPVACVHDVSYPEGSFNPLPSSSISSTGE 60
            MGSSKRK+V+D PR+SSPK  R N  A VEDEPVACVHDVSYPEGS+NPLPS ++SSTGE
Sbjct: 1    MGSSKRKVVEDTPRESSPKHQRTNEPAMVEDEPVACVHDVSYPEGSYNPLPSINLSSTGE 60

Query: 61   KLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT 120
            KLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT
Sbjct: 61   KLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT 120

Query: 121  SPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAW 180
            SPIKALSNQKYREFKEEFSDVGLMTGDVTI+PNASCLVMTTEIWRSMQYKGSE+TREVAW
Sbjct: 121  SPIKALSNQKYREFKEEFSDVGLMTGDVTIEPNASCLVMTTEIWRSMQYKGSEITREVAW 180

Query: 181  IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHHQPCHIVY 240
            IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVH QPCHIVY
Sbjct: 181  IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHQQPCHIVY 240

Query: 241  TDYRPTPLQHYIFPSGGEGLYLVVDEKGHFREDSFQKALNALVPVSDSDKKKENNGKWQK 300
            TDYRPTPLQHYIFPSGGEGLYLVVDEKGHFREDSFQKALNALVP SD  KKKENNGKWQK
Sbjct: 241  TDYRPTPLQHYIFPSGGEGLYLVVDEKGHFREDSFQKALNALVPASDGYKKKENNGKWQK 300

Query: 301  SLTLGKTGEESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKLDLNGDDEKANIE 360
            SLTLGKT EESDIFKMVKMIIQRQYDPVI+FSFSKRECEFLAMQMAKLDLNGDDEKANIE
Sbjct: 301  SLTLGKTNEESDIFKMVKMIIQRQYDPVIIFSFSKRECEFLAMQMAKLDLNGDDEKANIE 360

Query: 361  TIFWSAMDMLSDDDKKLPQASHSFSVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL 420
            TIFWSAMDMLSDDDKKLPQ      VSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL
Sbjct: 361  TIFWSAMDMLSDDDKKLPQ------VSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL 420

Query: 421  IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRGIC 480
            IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGID+RGIC
Sbjct: 421  IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDERGIC 480

Query: 481  ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRSEDGDPENLLRNSFYQFQAD 540
            ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIR EDG+PENLLRNSFYQFQAD
Sbjct: 481  ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRCEDGNPENLLRNSFYQFQAD 540

Query: 541  RNIPNLEKRVKSLEEERDSIVIEEEDNLKNYYDLLKQYKSLKKDIRDIVLSPRYCLPFLQ 600
            RNIPNLEK+VKSLEEERDSIVIEEEDNLKNYYDLLKQYKSLKKDIRDIVLSPRYCLPFLQ
Sbjct: 541  RNIPNLEKQVKSLEEERDSIVIEEEDNLKNYYDLLKQYKSLKKDIRDIVLSPRYCLPFLQ 600

Query: 601  PGRLVSIECNSNDEISSTFSIKDQVTWGLIINFQRVKGVSEDDASMKPESANYTVDILTR 660
            PGRL+SIEC+SN+EISSTFSIKDQ TWGLIINFQR+KGVSEDDASMKPESANYTVD+LTR
Sbjct: 601  PGRLISIECDSNNEISSTFSIKDQFTWGLIINFQRMKGVSEDDASMKPESANYTVDVLTR 660

Query: 661  CIVSKDGIGKKNVKIVQLKEHGEPHVVSIPISQISTLASIRILIPNDLLPLEARENTLKK 720
            C+VSKDGIGKKNVKIVQLKEHGEPHVVSIPISQISTLASIRILIPNDLLPLEARENTLKK
Sbjct: 661  CVVSKDGIGKKNVKIVQLKEHGEPHVVSIPISQISTLASIRILIPNDLLPLEARENTLKK 720

Query: 721  ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHEAAKSTLVEQKLKAL 780
            ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHE AKS LV+QKLKAL
Sbjct: 721  ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHEVAKSALVDQKLKAL 780

Query: 781  HLKQELTAKIRSIKKTLRSSSALAFKDELKARKRVLRRLGYISSDDVVELKGKVACEISS 840
            HLKQELTAKIRSIKKT+RSSSALAFKDELKARKRVLRRLGYI+SDDVVELKGKVACEISS
Sbjct: 781  HLKQELTAKIRSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISS 840

Query: 841  ANELTLSELMFNGIFKDIKVEEVVALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV 900
            ANELTLSELMFNG+FKDIKVEE++ALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV
Sbjct: 841  ANELTLSELMFNGVFKDIKVEEIIALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV 900

Query: 901  AKVQLECKVEIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE 960
            AK QLECKVEIDVEGFV+SFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE
Sbjct: 901  AKAQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE 960

Query: 961  VLQQLILAAKSIGETELETKFEEAVSKIKRDIVFAASLYL 1001
            VLQQL LAAKSIGETELETKFEEAVSKIKRDIVFAASLYL
Sbjct: 961  VLQQLTLAAKSIGETELETKFEEAVSKIKRDIVFAASLYL 994

[Close]
BLAST of Clc06G03460 vs. NCBI nr
Match: XP_023548429.1 (DExH-box ATP-dependent RNA helicase DExH9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1858.6 bits (4813), Expect = 0.0e+00
Identity = 950/1000 (95.00%), Postives = 974/1000 (97.40%), Query Frame = 0 

Query: 1    MGSSKRKLVDDAPRQSSPKQHRANARANVEDEPVACVHDVSYPEGSFNPLPSSSISSTGE 60
            MGSSKRK+V+D PR+SSPK HR N  A VEDEPVACVHDVSYPEGS+NPLPS ++SSTGE
Sbjct: 1    MGSSKRKVVEDTPRESSPKHHRTNEPAMVEDEPVACVHDVSYPEGSYNPLPSINLSSTGE 60

Query: 61   KLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT 120
            KLEPAKVFPFSLDPFQSEAIKCLE GESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT
Sbjct: 61   KLEPAKVFPFSLDPFQSEAIKCLEIGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT 120

Query: 121  SPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAW 180
            SPIKALSNQKYREFKEEFSDVGLMTGDVTI+PNASCLVMTTEIWRSMQYKGSE+TREVAW
Sbjct: 121  SPIKALSNQKYREFKEEFSDVGLMTGDVTIEPNASCLVMTTEIWRSMQYKGSEITREVAW 180

Query: 181  IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHHQPCHIVY 240
            IIFDEVHYMRDRERGVVWEESIVMAPKNAR VFLSATVPNAKEFADWVAKVH QPCHIVY
Sbjct: 181  IIFDEVHYMRDRERGVVWEESIVMAPKNARLVFLSATVPNAKEFADWVAKVHRQPCHIVY 240

Query: 241  TDYRPTPLQHYIFPSGGEGLYLVVDEKGHFREDSFQKALNALVPVSDSDKKKENNGKWQK 300
            TDYRPTPLQHYIFPSGGEGLYLVVDEKGHFREDSFQKALNALVP SD  KKKENNGKWQK
Sbjct: 241  TDYRPTPLQHYIFPSGGEGLYLVVDEKGHFREDSFQKALNALVPASDGYKKKENNGKWQK 300

Query: 301  SLTLGKTGEESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKLDLNGDDEKANIE 360
            SLTLGKT EESDIFKMVKMIIQRQYDPVI+FSFSKRECEFLAMQMAKLDLNGDDEKANIE
Sbjct: 301  SLTLGKTNEESDIFKMVKMIIQRQYDPVIIFSFSKRECEFLAMQMAKLDLNGDDEKANIE 360

Query: 361  TIFWSAMDMLSDDDKKLPQASHSFSVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL 420
            TIFWSAMDMLSDDDKKLPQ      VSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL
Sbjct: 361  TIFWSAMDMLSDDDKKLPQ------VSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL 420

Query: 421  IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRGIC 480
            IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGID+RGIC
Sbjct: 421  IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDERGIC 480

Query: 481  ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRSEDGDPENLLRNSFYQFQAD 540
            ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIR EDG+PENLLRNSFYQFQAD
Sbjct: 481  ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRCEDGNPENLLRNSFYQFQAD 540

Query: 541  RNIPNLEKRVKSLEEERDSIVIEEEDNLKNYYDLLKQYKSLKKDIRDIVLSPRYCLPFLQ 600
            RNIPNLEK+VKSLEEERDSIVIEEEDNLKNYYDLLKQYKSLKKDIRDIVLSPRYCLPFLQ
Sbjct: 541  RNIPNLEKQVKSLEEERDSIVIEEEDNLKNYYDLLKQYKSLKKDIRDIVLSPRYCLPFLQ 600

Query: 601  PGRLVSIECNSNDEISSTFSIKDQVTWGLIINFQRVKGVSEDDASMKPESANYTVDILTR 660
            PGRL+SIEC+SN+EISSTFSIKDQ TWGLIINFQR+KGVSEDDASMKPESANYTVDILTR
Sbjct: 601  PGRLISIECDSNNEISSTFSIKDQFTWGLIINFQRMKGVSEDDASMKPESANYTVDILTR 660

Query: 661  CIVSKDGIGKKNVKIVQLKEHGEPHVVSIPISQISTLASIRILIPNDLLPLEARENTLKK 720
            C+VSKDGIGKKNVKIVQLKEHGEPHVVSIPISQISTLASIRILIPNDLLPLEARENTLKK
Sbjct: 661  CVVSKDGIGKKNVKIVQLKEHGEPHVVSIPISQISTLASIRILIPNDLLPLEARENTLKK 720

Query: 721  ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHEAAKSTLVEQKLKAL 780
            ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHE AKS LV+QKLKAL
Sbjct: 721  ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHEVAKSALVDQKLKAL 780

Query: 781  HLKQELTAKIRSIKKTLRSSSALAFKDELKARKRVLRRLGYISSDDVVELKGKVACEISS 840
            HLKQELTAKIRSIKKT+RSSSALAFKDELKARKRVLRRLGYI+SDDVVELKGKVACEISS
Sbjct: 781  HLKQELTAKIRSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISS 840

Query: 841  ANELTLSELMFNGIFKDIKVEEVVALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV 900
            ANELTLSELMFNG+FKDIKVEE++ALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV
Sbjct: 841  ANELTLSELMFNGVFKDIKVEEIIALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV 900

Query: 901  AKVQLECKVEIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE 960
            AK QLECKVEIDVEGFV+SFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE
Sbjct: 901  AKAQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE 960

Query: 961  VLQQLILAAKSIGETELETKFEEAVSKIKRDIVFAASLYL 1001
            VLQQL LAAKSIGETELETKFEEAVSKIKRDIVFAASLYL
Sbjct: 961  VLQQLTLAAKSIGETELETKFEEAVSKIKRDIVFAASLYL 994

[Close]
BLAST of Clc06G03460 vs. ExPASy Swiss-Prot
Match: Q9XIF2 (DExH-box ATP-dependent RNA helicase DExH9 OS=Arabidopsis thaliana OX=3702 GN=MTR4 PE=2 SV=1)

HSP 1 Score: 1521.9 bits (3939), Expect = 0.0e+00
Identity = 780/1002 (77.84%), Postives = 887/1002 (88.52%), Query Frame = 0 

Query: 1    MGSSKRKLVDDAPRQSSPK--QHRANARANVEDEPVACVHDVSYPEGSFNPLPSSSISST 60
            MGS KRK V+++   + P+  Q   ++   + +E V CVHDVS+PE ++ PL  S     
Sbjct: 1    MGSVKRKSVEESSDSAPPQKVQREDDSTQIINEELVGCVHDVSFPE-NYVPLAPSV---- 60

Query: 61   GEKLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVI 120
                 PAK FPF+LD FQSEAIKCL+ GESVMVSAHTSAGKTVVA YAIAMSL+  QRVI
Sbjct: 61   -HNKPPAKDFPFTLDSFQSEAIKCLDNGESVMVSAHTSAGKTVVASYAIAMSLKENQRVI 120

Query: 121  YTSPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREV 180
            YTSPIKALSNQKYR+FKEEFSDVGLMTGDVTIDPNASCLVMTTEI RSMQYKGSE+ REV
Sbjct: 121  YTSPIKALSNQKYRDFKEEFSDVGLMTGDVTIDPNASCLVMTTEILRSMQYKGSEIMREV 180

Query: 181  AWIIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHHQPCHI 240
            AWIIFDEVHYMRD ERGVVWEESIVMAPKN+RFVFLSATVPNAKEFADWVAKVH QPCHI
Sbjct: 181  AWIIFDEVHYMRDSERGVVWEESIVMAPKNSRFVFLSATVPNAKEFADWVAKVHQQPCHI 240

Query: 241  VYTDYRPTPLQHYIFPSGGEGLYLVVDEKGHFREDSFQKALNALVPVSDSDKKKENNGKW 300
            VYTDYRPTPLQHY+FP+GG GLYLVVDEK  F EDSFQK+LNALVP ++SDKK++ NGK+
Sbjct: 241  VYTDYRPTPLQHYVFPAGGNGLYLVVDEKSKFHEDSFQKSLNALVPTNESDKKRD-NGKF 300

Query: 301  QKSLTLGKTGEESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKLDLNGDDEKAN 360
            QK L +GK GEESDIFK+VKMIIQRQYDPVILFSFSK+ECE LAMQM+K+ LN DDEK  
Sbjct: 301  QKGLVIGKLGEESDIFKLVKMIIQRQYDPVILFSFSKKECEALAMQMSKMVLNSDDEKDA 360

Query: 361  IETIFWSAMDMLSDDDKKLPQASHSFSVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQE 420
            +ETIF SA+DMLSDDDKKLPQ      VSN+LP+LKRGIGVHHSGLLPILKEVIEILFQE
Sbjct: 361  VETIFASAIDMLSDDDKKLPQ------VSNILPILKRGIGVHHSGLLPILKEVIEILFQE 420

Query: 421  GLIKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRG 480
            GLIKCLFATETFSIGLNMPAKTVVF+NVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRG
Sbjct: 421  GLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRG 480

Query: 481  ICILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRSEDGDPENLLRNSFYQFQ 540
            ICILMVDEK+EP+ AK MLKG+AD LNSAFHLSYNMLLNQ+R E+GDPENLLRNSF+QFQ
Sbjct: 481  ICILMVDEKMEPAVAKSMLKGSADSLNSAFHLSYNMLLNQLRCEEGDPENLLRNSFFQFQ 540

Query: 541  ADRNIPNLEKRVKSLEEERDSIVIEEEDNLKNYYDLLKQYKSLKKDIRDIVLSPRYCLPF 600
            ADR IP+LEK++KSLEEERDS+VIEEE++LKNYY+L+ QYKSLKKDIR+IV +P+YCLPF
Sbjct: 541  ADRAIPDLEKQIKSLEEERDSLVIEEEESLKNYYNLILQYKSLKKDIREIVFTPKYCLPF 600

Query: 601  LQPGRLVSIECNSNDEISSTFSIKDQVTWGLIINFQRVKGVSEDDASMKPESANYTVDIL 660
            L P R V ++C ++DE   +FSI+DQ TWG+I+ F +VK +SEDD S +PE ANYTVD+L
Sbjct: 601  LLPNRAVCLDCTNDDEEPQSFSIEDQDTWGVIMKFNKVKSLSEDDDSRRPEDANYTVDVL 660

Query: 661  TRCIVSKDGIGKKNVKIVQLKEHGEPHVVSIPISQISTLASIRILIPNDLLPLEARENTL 720
            TRC+VSKDG+GKK VK V +KE GEP VV++P+SQI +L+S  + IP DL+PLEAREN L
Sbjct: 661  TRCMVSKDGVGKKKVKAVPIKERGEPVVVTVPLSQIKSLSSAIMNIPKDLVPLEARENAL 720

Query: 721  KKISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHEAAKSTLVEQKLK 780
            KK+SE+LSR P G+P LDPE DMKI+SSSY+K VRR EALE+LF+KH+ AKS L+ +KLK
Sbjct: 721  KKVSELLSRHPDGIP-LDPEVDMKIKSSSYKKTVRRLEALENLFEKHKIAKSPLITEKLK 780

Query: 781  ALHLKQELTAKIRSIKKTLRSSSALAFKDELKARKRVLRRLGYISSDDVVELKGKVACEI 840
             L +K+EL AKI+S+KKT+RSS+ALAFKDELKARKRVLRRLGYI+SD+VVELKGKVACEI
Sbjct: 781  VLQMKEELIAKIKSLKKTVRSSTALAFKDELKARKRVLRRLGYITSDNVVELKGKVACEI 840

Query: 841  SSANELTLSELMFNGIFKDIKVEEVVALLSCFVWQEKLQDAAKPREELELLFIQLQDTAR 900
            SSA ELTL+ELMF+GIFKD KVEE+V+LLSCFVW+E+L DAAKPREEL+LLFIQLQDTAR
Sbjct: 841  SSAEELTLTELMFSGIFKDAKVEELVSLLSCFVWRERLPDAAKPREELDLLFIQLQDTAR 900

Query: 901  RVAKVQLECKVEIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRL 960
            RVA+VQL+CKVEIDVE FV SFRPDIMEAVYAWAKGSKFYE+MEI +VFEGSLIRAIRR+
Sbjct: 901  RVAEVQLDCKVEIDVESFVQSFRPDIMEAVYAWAKGSKFYEVMEIARVFEGSLIRAIRRM 960

Query: 961  EEVLQQLILAAKSIGETELETKFEEAVSKIKRDIVFAASLYL 1001
            EEVLQQLI+AAKSIGET+LE K EEAVSKIKRDIVFAASLYL
Sbjct: 961  EEVLQQLIVAAKSIGETQLEAKLEEAVSKIKRDIVFAASLYL 988

[Close]
BLAST of Clc06G03460 vs. ExPASy Swiss-Prot
Match: P42285 (Exosome RNA helicase MTR4 OS=Homo sapiens OX=9606 GN=MTREX PE=1 SV=3)

HSP 1 Score: 1020.0 bits (2636), Expect = 1.8e-296
Identity = 526/969 (54.28%), Postives = 688/969 (71.00%), Query Frame = 0 

Query: 36   CVHDVSYP-EGSFNPLPSSSISSTGEKLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAH 95
            C H+V+ P E  + PL            + AK +PF LD FQ EAI+C++  +SV+VSAH
Sbjct: 110  CTHEVALPAEEDYLPLKP-------RVGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAH 169

Query: 96   TSAGKTVVALYAIAMSLRNKQRVIYTSPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNA 155
            TSAGKTV A YAIA++LR KQRVI+TSPIKALSNQKYRE  EEF DVGLMTGDVTI+P A
Sbjct: 170  TSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTA 229

Query: 156  SCLVMTTEIWRSMQYKGSEVTREVAWIIFDEVHYMRDRERGVVWEESIVMAPKNARFVFL 215
            SCLVMTTEI RSM Y+GSEV REVAW+IFDE+HYMRD ERGVVWEE+I++ P N  +VFL
Sbjct: 230  SCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYVFL 289

Query: 216  SATVPNAKEFADWVAKVHHQPCHIVYTDYRPTPLQHYIFPSGGEGLYLVVDEKGHFREDS 275
            SAT+PNA++FA+W+  +H QPCH++YTDYRPTPLQHYIFP+GG+GL+LVVDE G FRED+
Sbjct: 290  SATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFREDN 349

Query: 276  FQKALNALVPVSDSDKKKENNGKWQKSLTLGKTGEESDIFKMVKMIIQRQYDPVILFSFS 335
            F  A+  L    D  K  +   K       G T   S++FK+VKMI++R + PVI+FSFS
Sbjct: 350  FNTAMQVLRDAGDLAKGDQKGRK-------GGTKGPSNVFKIVKMIMERNFQPVIIFSFS 409

Query: 336  KRECEFLAMQMAKLDLNGDDEKANIETIFWSAMDMLSDDDKKLPQASHSFSVSNMLPLLK 395
            K++CE  A+QM KLD N D+EK  +E +F +A+D LSD+DKKLPQ  H      +LPLLK
Sbjct: 410  KKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEH------VLPLLK 469

Query: 396  RGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKF 455
            RGIG+HH GLLPILKE IEILF EGLIK LFATETF++G+NMPA+TV+F+N RKFDG  F
Sbjct: 470  RGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDF 529

Query: 456  RWLSSGEYIQMSGRAGRRGIDKRGICILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNM 515
            RW+SSGEYIQMSGRAGRRG+D RGI ILMVDEK+ P+  K +LKG+AD LNSAFHL+YNM
Sbjct: 530  RWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNM 589

Query: 516  LLNQIRSEDGDPENLLRNSFYQFQADRNIPNLEKRVKSLEEERDSIVIEEEDNLKNYYDL 575
            +LN +R E+ +PE +L  SFYQFQ  R IP + ++VK+ EE+ + IVI  E+++  YY +
Sbjct: 590  VLNLLRVEEINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKI 649

Query: 576  LKQYKSLKKDIRDIVLSPRYCLPFLQPGRLVSIECNSNDEISSTFSIKDQVTWGLIINFQ 635
             +Q   L K+I + +  P+YCLPFLQPGRLV ++ N  D+            WG+++NF 
Sbjct: 650  RQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVK-NEGDDFG----------WGVVVNFS 709

Query: 636  RVKGVSEDDASMKPESANYTVDILTRCIVSKDGI---GKKNVKIVQLKEHGEPHVVSIPI 695
            +   V  +   + P    Y V++L RC  SK+ +     +  K  +  E GE  VV + +
Sbjct: 710  KKSNVKPNSGELDP---LYVVEVLLRC--SKESLKNSATEAAKPAKPDEKGEMQVVPVLV 769

Query: 696  SQISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDMKIQSSSYRKA 755
              +S ++S+R+ IP DL P++ R++ LK I EV  RFP G+PLLDP +DM IQ    +K 
Sbjct: 770  HLLSAISSVRLYIPKDLRPVDNRQSVLKSIQEVQKRFPDGIPLLDPIDDMGIQDQGLKKV 829

Query: 756  VRRTEALESLFDKHEAAKSTLVEQKLKALHLKQELTAKIRSIKKTLRSSSALAFKDELKA 815
            +++ EA E     H       +E        K ++   I+S K+ L+ +  +   DELK 
Sbjct: 830  IQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKC 889

Query: 816  RKRVLRRLGYISSDDVVELKGKVACEISSANELTLSELMFNGIFKDIKVEEVVALLSCFV 875
            RKRVLRRLG+ +S DV+E+KG+VACEISSA+EL L+E+MFNG+F D+  E+  ALLSCFV
Sbjct: 890  RKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFV 949

Query: 876  WQEKLQDAAKPREELELLFIQLQDTARRVAKVQLECKVEIDVEGFVNSFRPDIMEAVYAW 935
            +QE   +  K  E+L     Q+Q+ A+R+AKV  E K+EID E +++SF+P +M+ VY W
Sbjct: 950  FQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLSSFKPHLMDVVYTW 1009

Query: 936  AKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELETKFEEAVSKIKRD 995
            A G+ F  I ++T VFEGS+IR +RRLEE+L+Q+  AAK+IG TELE KF E ++KIKRD
Sbjct: 1010 ATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRD 1042

Query: 996  IVFAASLYL 1001
            IVFAASLYL
Sbjct: 1070 IVFAASLYL 1042

[Close]
BLAST of Clc06G03460 vs. ExPASy Swiss-Prot
Match: Q9CZU3 (Exosome RNA helicase MTR4 OS=Mus musculus OX=10090 GN=Mtrex PE=1 SV=1)

HSP 1 Score: 1017.3 bits (2629), Expect = 1.2e-295
Identity = 525/969 (54.18%), Postives = 688/969 (71.00%), Query Frame = 0 

Query: 36   CVHDVSYP-EGSFNPLPSSSISSTGEKLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAH 95
            C H+V+ P +  + PL            + AK +PF LD FQ EAI+C++  +SV+VSAH
Sbjct: 108  CTHEVALPADEDYIPLKP-------RVGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAH 167

Query: 96   TSAGKTVVALYAIAMSLRNKQRVIYTSPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNA 155
            TSAGKTV A YAIA++LR KQRVI+TSPIKALSNQKYRE  EEF DVGLMTGDVTI+P A
Sbjct: 168  TSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTA 227

Query: 156  SCLVMTTEIWRSMQYKGSEVTREVAWIIFDEVHYMRDRERGVVWEESIVMAPKNARFVFL 215
            SCLVMTTEI RSM Y+GSEV REVAW+IFDE+HYMRD ERGVVWEE+I++ P N  +VFL
Sbjct: 228  SCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYVFL 287

Query: 216  SATVPNAKEFADWVAKVHHQPCHIVYTDYRPTPLQHYIFPSGGEGLYLVVDEKGHFREDS 275
            SAT+PNA++FA+W+  +H QPCH++YTDYRPTPLQHYIFP+GG+GL+LVVDE G FRED+
Sbjct: 288  SATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFREDN 347

Query: 276  FQKALNALVPVSDSDKKKENNGKWQKSLTLGKTGEESDIFKMVKMIIQRQYDPVILFSFS 335
            F  A+  L    D  K  +   K       G T   S++FK+VKMI++R + PVI+FSFS
Sbjct: 348  FNTAMQVLRDAGDLAKGDQKGRK-------GGTKGPSNVFKIVKMIMERNFQPVIIFSFS 407

Query: 336  KRECEFLAMQMAKLDLNGDDEKANIETIFWSAMDMLSDDDKKLPQASHSFSVSNMLPLLK 395
            K++CE  A+QM KLD N D+EK  +E +F +A+D LSD+DKKLPQ  H      +LPLLK
Sbjct: 408  KKDCEAYALQMTKLDFNTDEEKKMVEEVFNNAIDCLSDEDKKLPQVEH------VLPLLK 467

Query: 396  RGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKF 455
            RGIG+HH GLLPILKE IEILF EGLIK LFATETF++G+NMPA+TV+F+N RK+DG  F
Sbjct: 468  RGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKYDGKDF 527

Query: 456  RWLSSGEYIQMSGRAGRRGIDKRGICILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNM 515
            RW+SSGEYIQMSGRAGRRG+D RGI ILMVDEK+ P+  K +LKG+AD LNSAFHL+YNM
Sbjct: 528  RWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNM 587

Query: 516  LLNQIRSEDGDPENLLRNSFYQFQADRNIPNLEKRVKSLEEERDSIVIEEEDNLKNYYDL 575
            +LN +R E+ +PE +L  SFYQFQ  R IP + ++VK+ EE+ + IVI  E+N+  YY +
Sbjct: 588  VLNLLRVEEINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEENVVIYYKI 647

Query: 576  LKQYKSLKKDIRDIVLSPRYCLPFLQPGRLVSIECNSNDEISSTFSIKDQVTWGLIINFQ 635
             +Q   L K+I + +  P+YCLPFLQPGRLV ++ N  D+            WG+++NF 
Sbjct: 648  RQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVK-NEGDDFG----------WGVVVNFS 707

Query: 636  RVKGVSEDDASMKPESANYTVDILTRCIVSKDGI---GKKNVKIVQLKEHGEPHVVSIPI 695
            +   V  +   + P    Y V++L RC  SK+ +     +  K  +  E GE  VV + +
Sbjct: 708  KKSNVKPNSGELDP---LYVVEVLLRC--SKESLKNSATEAAKPAKPDEKGEMQVVPVLV 767

Query: 696  SQISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDMKIQSSSYRKA 755
              +S ++++R+ IP DL P++ R++ LK I EV  RFP GVPLLDP +DM IQ    +K 
Sbjct: 768  HLLSAISTVRLYIPKDLRPVDNRQSVLKSIQEVQRRFPDGVPLLDPIDDMGIQDQGLKKV 827

Query: 756  VRRTEALESLFDKHEAAKSTLVEQKLKALHLKQELTAKIRSIKKTLRSSSALAFKDELKA 815
            +++ EA E     H       +E        K ++   I+S K+ L+ +  +   DELK 
Sbjct: 828  IQKVEAFEHRMYSHPLHNDPNLETVYTLCERKAQIALDIKSAKRELKKARTVLQMDELKC 887

Query: 816  RKRVLRRLGYISSDDVVELKGKVACEISSANELTLSELMFNGIFKDIKVEEVVALLSCFV 875
            RKRVLRRLG+ +S DV+E+KG+VACEISSA+EL L+E+MFNG+F D+  E+  ALLSCFV
Sbjct: 888  RKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSSEQATALLSCFV 947

Query: 876  WQEKLQDAAKPREELELLFIQLQDTARRVAKVQLECKVEIDVEGFVNSFRPDIMEAVYAW 935
            +QE   +  K  E+L     Q+Q+ A+R+AKV  E K+EID E +++SF+P +M+ VY W
Sbjct: 948  FQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLSSFKPHLMDVVYTW 1007

Query: 936  AKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELETKFEEAVSKIKRD 995
            A G+ F  I ++T VFEGS+IR +RRLEE+L+Q+  AAK+IG TELE KF E ++KIKRD
Sbjct: 1008 ATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRD 1040

Query: 996  IVFAASLYL 1001
            IVFAASLYL
Sbjct: 1068 IVFAASLYL 1040

[Close]
BLAST of Clc06G03460 vs. ExPASy Swiss-Prot
Match: O14232 (ATP-dependent RNA helicase mtr4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mtr4 PE=1 SV=1)

HSP 1 Score: 951.8 bits (2459), Expect = 6.1e-276
Identity = 511/975 (52.41%), Postives = 686/975 (70.36%), Query Frame = 0 

Query: 38   HDVSYPEGSFNPLPSSSISSTGEKLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSA 97
            H VS P  +++ +P   IS     + PA+ +PF+LDPFQ+ +I C+E  ESV+VSAHTSA
Sbjct: 169  HQVSIPP-NYDYVP---ISKHKSPIPPARTYPFTLDPFQAVSIACIERQESVLVSAHTSA 228

Query: 98   GKTVVALYAIAMSLRNKQRVIYTSPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCL 157
            GKTVVA YA+A SLR+KQRVIYTSPIKALSNQKYRE   EF DVGLMTGDVTI+P+A+CL
Sbjct: 229  GKTVVAEYAVAQSLRDKQRVIYTSPIKALSNQKYRELLAEFGDVGLMTGDVTINPDATCL 288

Query: 158  VMTTEIWRSMQYKGSEVTREVAWIIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSAT 217
            VMTTEI RSM Y+GSEV REVAW+IFDE+HYMRD+ERGVVWEE+I++ P  + FVFLSAT
Sbjct: 289  VMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDKERGVVWEETIILLPDKSHFVFLSAT 348

Query: 218  VPNAKEFADWVAKVHHQPCHIVYTDYRPTPLQHYIFPSGGEGLYLVVDEKGHFREDSFQK 277
            +PNA +FA+W+ K+H QPCH+VYTD+RPTPLQHY+FPSG +G++LVVDEK +FRE++FQ+
Sbjct: 349  IPNAMQFAEWITKIHRQPCHVVYTDFRPTPLQHYLFPSGSDGIHLVVDEKSNFREENFQR 408

Query: 278  ALNALV-PVSDSDKKKENNGKWQKSLTLGKTGEE--SDIFKMVKMIIQRQYDPVILFSFS 337
            A++AL+    D        G  +K  T GK G +  SDI+K+VKMI+ + Y+PVI+FSFS
Sbjct: 409  AMSALMEKQGDDPAAMATKGNAKKGKT-GKGGVKGPSDIYKIVKMIMVKNYNPVIVFSFS 468

Query: 338  KRECEFLAMQMAKLDLNGDDEKANIETIFWSAMDMLSDDDKKLPQASHSFSVSNMLPLLK 397
            KRECE LA+QM+KLD+N   E+  + TIF +A++ LS+ D++LPQ  H      +LPLL+
Sbjct: 469  KRECEALALQMSKLDMNDQTERDLVTTIFNNAVNQLSEKDRELPQIEH------ILPLLR 528

Query: 398  RGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKF 457
            RGIG+HHSGLLPILKEVIEILFQEGL+K LFATETFSIGLNMPAKTVVF+NVRKFDG  F
Sbjct: 529  RGIGIHHSGLLPILKEVIEILFQEGLLKVLFATETFSIGLNMPAKTVVFTNVRKFDGKTF 588

Query: 458  RWLSSGEYIQMSGRAGRRGIDKRGICILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNM 517
            RW+S GEYIQMSGRAGRRG+D RGI ILM+DEK++P  AK MLKG AD L+SAFHLSYNM
Sbjct: 589  RWISGGEYIQMSGRAGRRGLDDRGIVILMIDEKMDPPVAKSMLKGEADRLDSAFHLSYNM 648

Query: 518  LLNQIRSEDGDPENLLRNSFYQFQADRNIPNLEKRVKSLEEERDSIVIEEEDNLKNYYDL 577
            +LN +R E   PE +L   F+QFQ    +P LE +++  ++  DS  I +E  L+ Y+ L
Sbjct: 649  ILNLLRVEGISPEFMLERCFFQFQNSLEVPKLEAKLEESQQHYDSFTILDERPLEEYHTL 708

Query: 578  LKQYKSLKKDIRDIVLSPRYCLPFLQPGRLVSIECNSNDEISSTFSIKDQVTWGLIINFQ 637
              Q +  + D+R +V  P +CL FLQ GRLV ++  + D             WG+++N  
Sbjct: 709  KTQLERYRTDVRTVVNHPNFCLSFLQGGRLVRVKVGNED-----------FDWGVVVNVS 768

Query: 638  RVKGVSEDDASMKPESANYTVDILTRCIVSKDGIGKKNVKIVQLKE--------HGEPHV 697
            + + + +  ++      +Y V  L   +V+ D  G   ++   L E         G+  V
Sbjct: 769  K-RPLPKGQSNEYLPQESYIVHTLV--MVASD-TGPLRIRSGHLPEVHPPAAEDKGKFEV 828

Query: 698  VSIPISQISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDMKIQSS 757
            V   +S +  +A IR+ +PNDL     +    K +SEV  RFP+G+ LLDP E+M I+  
Sbjct: 829  VPFLLSSLDGIAHIRVFLPNDLKSQGQKLTVGKALSEVKRRFPEGITLLDPVENMNIKEP 888

Query: 758  SYRKAVRRTEALESLFDKHEAAKSTLVEQKLKALHLKQELTAKIRSIKKTLRSSSALAFK 817
            ++ K +++   LES    +     + +E+K      K  L  +++ +KK L  + ++   
Sbjct: 889  TFIKLMKKVNILESRLLSNPLHNFSELEEKYAEYLRKLALLEEVKDLKKKLSKARSIMQL 948

Query: 818  DELKARKRVLRRLGYISSDDVVELKGKVACEISSANELTLSELMFNGIFKDIKVEEVVAL 877
            DEL +RKRVLRRLG+ +SDDV+E+KG+VACEISS + L L+EL+FNG+F D+  E+  AL
Sbjct: 949  DELNSRKRVLRRLGFTTSDDVIEVKGRVACEISSGDGLLLTELIFNGMFNDLTPEQCAAL 1008

Query: 878  LSCFVWQEKLQ-DAAKPREELELLFIQLQDTARRVAKVQLECKVEIDVEGFVNSFRPDIM 937
            LSC V+QEK + +  + +EEL      LQ+ ARR+AKV  E K E++ E +VNSF+P +M
Sbjct: 1009 LSCLVFQEKSEVENQRMKEELAGPLKILQEMARRIAKVSKESKQELNEEEYVNSFKPSLM 1068

Query: 938  EAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELETKFEEAV 997
            E VYAWA G+ F +I ++T V+EGSLIR  RRLEE+++Q++ AAK IG T L+ K E+ +
Sbjct: 1069 EVVYAWAHGASFAQICKMTDVYEGSLIRMFRRLEELIRQMVDAAKVIGNTSLQQKMEDTI 1117

Query: 998  SKIKRDIVFAASLYL 1001
            + I RDIVF+ASLYL
Sbjct: 1129 ACIHRDIVFSASLYL 1117

[Close]
BLAST of Clc06G03460 vs. ExPASy Swiss-Prot
Match: P47047 (ATP-dependent RNA helicase DOB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MTR4 PE=1 SV=1)

HSP 1 Score: 929.1 bits (2400), Expect = 4.2e-269
Identity = 471/953 (49.42%), Postives = 671/953 (70.41%), Query Frame = 0 

Query: 60   EKLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIY 119
            +++  A+ +PF+LDPFQ  AI C++ GESV+VSAHTSAGKTVVA YAIA SL+NKQRVIY
Sbjct: 138  KRVNEARTYPFTLDPFQDTAISCIDRGESVLVSAHTSAGKTVVAEYAIAQSLKNKQRVIY 197

Query: 120  TSPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVA 179
            TSPIKALSNQKYRE   EF DVGLMTGD+TI+P+A CLVMTTEI RSM Y+GSEV REVA
Sbjct: 198  TSPIKALSNQKYRELLAEFGDVGLMTGDITINPDAGCLVMTTEILRSMLYRGSEVMREVA 257

Query: 180  WIIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHHQPCHIV 239
            W+IFDEVHYMRD+ERGVVWEE+I++ P   R+VFLSAT+PNA EFA+W+ K+H QPCHIV
Sbjct: 258  WVIFDEVHYMRDKERGVVWEETIILLPDKVRYVFLSATIPNAMEFAEWICKIHSQPCHIV 317

Query: 240  YTDYRPTPLQHYIFPSGGEGLYLVVDEKGHFREDSFQKALNALV-PVSDSDKKKENNGKW 299
            YT++RPTPLQHY+FP+ G+G+YLVVDEK  FRE++FQKA+ ++   + D     ++ GK 
Sbjct: 318  YTNFRPTPLQHYLFPAHGDGIYLVVDEKSTFREENFQKAMASISNQIGDDPNSTDSRGKK 377

Query: 300  QKSLTLG--KTGEESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKLDLNGDDEK 359
             ++   G  K   + DI+K+VKMI +++Y+PVI+FSFSKR+CE LA++M+KLD N DDEK
Sbjct: 378  GQTYKGGSAKGDAKGDIYKIVKMIWKKKYNPVIVFSFSKRDCEELALKMSKLDFNSDDEK 437

Query: 360  ANIETIFWSAMDMLSDDDKKLPQASHSFSVSNMLPLLKRGIGVHHSGLLPILKEVIEILF 419
              +  IF +A+ +L + D++LPQ  H      +LPLL+RGIG+HHSGLLPILKEVIEILF
Sbjct: 438  EALTKIFNNAIALLPETDRELPQIKH------ILPLLRRGIGIHHSGLLPILKEVIEILF 497

Query: 420  QEGLIKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDK 479
            QEG +K LFATETFSIGLNMPAKTVVF++VRK+DG +FRW+S GEYIQMSGRAGRRG+D 
Sbjct: 498  QEGFLKVLFATETFSIGLNMPAKTVVFTSVRKWDGQQFRWVSGGEYIQMSGRAGRRGLDD 557

Query: 480  RGICILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRSEDGDPENLLRNSFYQ 539
            RGI I+M+DEK+EP  AK M+KG AD L+SAFHL YNM+LN +R E   PE +L +SF+Q
Sbjct: 558  RGIVIMMIDEKMEPQVAKGMVKGQADRLDSAFHLGYNMILNLMRVEGISPEFMLEHSFFQ 617

Query: 540  FQADRNIPNLEKRVKSLEEERDSIVIEEEDNLKNYYDLLKQYKSLKKDIRDIVLSPRYCL 599
            FQ   ++P +EK++  L+++ D I +E+E+N+K Y+++ +  K  ++D+R +V  P   L
Sbjct: 618  FQNVISVPVMEKKLAELKKDFDGIEVEDEENVKEYHEIEQAIKGYREDVRQVVTHPANAL 677

Query: 600  PFLQPGRLVSIECNSNDEISSTFSIKDQVTWGLIINFQRVKGVSEDDASMKPESANYTVD 659
             FLQPGRLV I  N           KD   WG +++F + +    + +++  +  +Y V+
Sbjct: 678  SFLQPGRLVEISVNG----------KDNYGWGAVVDFAK-RINKRNPSAVYTDHESYIVN 737

Query: 660  ILTRCIVSKDGIG---------KKNVKIVQLKEHGEPHVVSIPISQISTLASIRILIPND 719
            ++   +     +           + ++  +  E     V+ I +  I ++ ++R+ +P D
Sbjct: 738  VVVNTMYIDSPVNLLKPFNPTLPEGIRPAEEGEKSICAVIPITLDSIKSIGNLRLYMPKD 797

Query: 720  LLPLEARENTLKKISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHEA 779
            +     +E   K + EV  RFP G+P+LDP ++MKI+   + K +++ + L +    +  
Sbjct: 798  IRASGQKETVGKSLREVNRRFPDGIPVLDPVKNMKIEDEDFLKLMKKIDVLNTKLSSNPL 857

Query: 780  AKSTLVEQKLKALHLKQELTAKIRSIKKTLRSSSALAFKDELKARKRVLRRLGYISSDDV 839
              S  +E+       K +L   ++ +K+ +  S A+   D+L+ RKRVLRRLG+ + +D+
Sbjct: 858  TNSMRLEELYGKYSRKHDLHEDMKQLKRKISESQAVIQLDDLRRRKRVLRRLGFCTPNDI 917

Query: 840  VELKGKVACEISSANELTLSELMFNGIFKDIKVEEVVALLSCFVWQEKLQDAAKPREELE 899
            +ELKG+VACEISS +EL L+EL+FNG F ++K E+  ALLSCF +QE+ ++A + + EL 
Sbjct: 918  IELKGRVACEISSGDELLLTELIFNGNFNELKPEQAAALLSCFAFQERCKEAPRLKPELA 977

Query: 900  LLFIQLQDTARRVAKVQLECKVEIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITQVF 959
                 +++ A ++AK+  + K+E+  + +V SFR ++ME VY W +G+ F +I ++T V+
Sbjct: 978  EPLKAMREIAAKIAKIMKDSKIEVVEKDYVESFRHELMEVVYEWCRGATFTQICKMTDVY 1037

Query: 960  EGSLIRAIRRLEEVLQQLILAAKSIGETELETKFEEAVSKIKRDIVFAASLYL 1001
            EGSLIR  +RLEE++++L+  A +IG + L+ K E  +  I RDIV A SLYL
Sbjct: 1038 EGSLIRMFKRLEELVKELVDVANTIGNSSLKEKMEAVLKLIHRDIVSAGSLYL 1073

[Close]
BLAST of Clc06G03460 vs. ExPASy TrEMBL
Match: A0A5D3CSJ2 (DExH-box ATP-dependent RNA helicase DExH9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold268G00110 PE=4 SV=1)

HSP 1 Score: 1871.3 bits (4846), Expect = 0.0e+00
Identity = 957/1000 (95.70%), Postives = 979/1000 (97.90%), Query Frame = 0 

Query: 1    MGSSKRKLVDDAPRQSSPKQHRANARANVEDEPVACVHDVSYPEGSFNPLPSSSISSTGE 60
            MGSSKRKLV+D  RQ+SPKQHR N  A VE EPVAC+HDVSYPEGSFNPLPSSS+SSTGE
Sbjct: 1    MGSSKRKLVEDDSRQASPKQHRTNVPAIVEHEPVACLHDVSYPEGSFNPLPSSSLSSTGE 60

Query: 61   KLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT 120
            KLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT
Sbjct: 61   KLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT 120

Query: 121  SPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAW 180
            SPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAW
Sbjct: 121  SPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAW 180

Query: 181  IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHHQPCHIVY 240
            IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVH QPCHIVY
Sbjct: 181  IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHQQPCHIVY 240

Query: 241  TDYRPTPLQHYIFPSGGEGLYLVVDEKGHFREDSFQKALNALVPVSDSDKKKENNGKWQK 300
            TDYRPTPLQHYIFPSG EGLYLVVDEKGHFREDSFQ+ALNALVPVSD DKKKENNGKWQK
Sbjct: 241  TDYRPTPLQHYIFPSGSEGLYLVVDEKGHFREDSFQRALNALVPVSDGDKKKENNGKWQK 300

Query: 301  SLTLGKTGEESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKLDLNGDDEKANIE 360
            SLTLGKTGEESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKLDLNGDDEK NIE
Sbjct: 301  SLTLGKTGEESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKLDLNGDDEKVNIE 360

Query: 361  TIFWSAMDMLSDDDKKLPQASHSFSVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL 420
            TIFWSAMDMLSDDDKKLPQ      VSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL
Sbjct: 361  TIFWSAMDMLSDDDKKLPQ------VSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL 420

Query: 421  IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRGIC 480
            IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRGIC
Sbjct: 421  IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRGIC 480

Query: 481  ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRSEDGDPENLLRNSFYQFQAD 540
            ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRSEDG+PENLLRNSFYQFQAD
Sbjct: 481  ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRSEDGNPENLLRNSFYQFQAD 540

Query: 541  RNIPNLEKRVKSLEEERDSIVIEEEDNLKNYYDLLKQYKSLKKDIRDIVLSPRYCLPFLQ 600
            RNIPNLEK+VKSLEEERDSIVIEEEDNLKNYYDLL QYKSLKKDIRDIVLSPRYCLPFLQ
Sbjct: 541  RNIPNLEKQVKSLEEERDSIVIEEEDNLKNYYDLLNQYKSLKKDIRDIVLSPRYCLPFLQ 600

Query: 601  PGRLVSIECNSNDEISSTFSIKDQVTWGLIINFQRVKGVSEDDASMKPESANYTVDILTR 660
            PGRLVSIECNSNDEISSTFSIKDQVTWGLIINFQ+VKGVSE+DASMKPESANYTVD+LTR
Sbjct: 601  PGRLVSIECNSNDEISSTFSIKDQVTWGLIINFQKVKGVSEEDASMKPESANYTVDVLTR 660

Query: 661  CIVSKDGIGKKNVKIVQLKEHGEPHVVSIPISQISTLASIRILIPNDLLPLEARENTLKK 720
            CIVSKDG+GKKNV+I+QLKEHGEPHVVSIPISQI+TLASIR+LIPNDLLPLEARENTLKK
Sbjct: 661  CIVSKDGVGKKNVRIIQLKEHGEPHVVSIPISQINTLASIRVLIPNDLLPLEARENTLKK 720

Query: 721  ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHEAAKSTLVEQKLKAL 780
            ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHE A+STLVE+KLKAL
Sbjct: 721  ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHEVARSTLVEEKLKAL 780

Query: 781  HLKQELTAKIRSIKKTLRSSSALAFKDELKARKRVLRRLGYISSDDVVELKGKVACEISS 840
            HLKQELTAKIRSIKK LRSSS LAFKDELKARKRVLRRLGYI+SDDVVELKGKVACEISS
Sbjct: 781  HLKQELTAKIRSIKKQLRSSSVLAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISS 840

Query: 841  ANELTLSELMFNGIFKDIKVEEVVALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV 900
            ANELTLSELMFNG+FKDIKVEE+VALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV
Sbjct: 841  ANELTLSELMFNGVFKDIKVEEIVALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV 900

Query: 901  AKVQLECKVEIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE 960
            AKVQLECKVEIDVEGFV+SFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE
Sbjct: 901  AKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE 960

Query: 961  VLQQLILAAKSIGETELETKFEEAVSKIKRDIVFAASLYL 1001
            VLQQLILA+KSIGETELETKFEEAVSKIKRDIVFAASLYL
Sbjct: 961  VLQQLILASKSIGETELETKFEEAVSKIKRDIVFAASLYL 994

[Close]
BLAST of Clc06G03460 vs. ExPASy TrEMBL
Match: A0A1S3C6P7 (DExH-box ATP-dependent RNA helicase DExH9 OS=Cucumis melo OX=3656 GN=LOC103497670 PE=4 SV=1)

HSP 1 Score: 1871.3 bits (4846), Expect = 0.0e+00
Identity = 957/1000 (95.70%), Postives = 979/1000 (97.90%), Query Frame = 0 

Query: 1    MGSSKRKLVDDAPRQSSPKQHRANARANVEDEPVACVHDVSYPEGSFNPLPSSSISSTGE 60
            MGSSKRKLV+D  RQ+SPKQHR N  A VE EPVAC+HDVSYPEGSFNPLPSSS+SSTGE
Sbjct: 1    MGSSKRKLVEDDSRQASPKQHRTNVPAIVEHEPVACLHDVSYPEGSFNPLPSSSLSSTGE 60

Query: 61   KLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT 120
            KLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT
Sbjct: 61   KLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT 120

Query: 121  SPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAW 180
            SPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAW
Sbjct: 121  SPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAW 180

Query: 181  IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHHQPCHIVY 240
            IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVH QPCHIVY
Sbjct: 181  IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHQQPCHIVY 240

Query: 241  TDYRPTPLQHYIFPSGGEGLYLVVDEKGHFREDSFQKALNALVPVSDSDKKKENNGKWQK 300
            TDYRPTPLQHYIFPSG EGLYLVVDEKGHFREDSFQ+ALNALVPVSD DKKKENNGKWQK
Sbjct: 241  TDYRPTPLQHYIFPSGSEGLYLVVDEKGHFREDSFQRALNALVPVSDGDKKKENNGKWQK 300

Query: 301  SLTLGKTGEESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKLDLNGDDEKANIE 360
            SLTLGKTGEESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKLDLNGDDEK NIE
Sbjct: 301  SLTLGKTGEESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKLDLNGDDEKVNIE 360

Query: 361  TIFWSAMDMLSDDDKKLPQASHSFSVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL 420
            TIFWSAMDMLSDDDKKLPQ      VSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL
Sbjct: 361  TIFWSAMDMLSDDDKKLPQ------VSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL 420

Query: 421  IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRGIC 480
            IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRGIC
Sbjct: 421  IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRGIC 480

Query: 481  ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRSEDGDPENLLRNSFYQFQAD 540
            ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRSEDG+PENLLRNSFYQFQAD
Sbjct: 481  ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRSEDGNPENLLRNSFYQFQAD 540

Query: 541  RNIPNLEKRVKSLEEERDSIVIEEEDNLKNYYDLLKQYKSLKKDIRDIVLSPRYCLPFLQ 600
            RNIPNLEK+VKSLEEERDSIVIEEEDNLKNYYDLL QYKSLKKDIRDIVLSPRYCLPFLQ
Sbjct: 541  RNIPNLEKQVKSLEEERDSIVIEEEDNLKNYYDLLNQYKSLKKDIRDIVLSPRYCLPFLQ 600

Query: 601  PGRLVSIECNSNDEISSTFSIKDQVTWGLIINFQRVKGVSEDDASMKPESANYTVDILTR 660
            PGRLVSIECNSNDEISSTFSIKDQVTWGLIINFQ+VKGVSE+DASMKPESANYTVD+LTR
Sbjct: 601  PGRLVSIECNSNDEISSTFSIKDQVTWGLIINFQKVKGVSEEDASMKPESANYTVDVLTR 660

Query: 661  CIVSKDGIGKKNVKIVQLKEHGEPHVVSIPISQISTLASIRILIPNDLLPLEARENTLKK 720
            CIVSKDG+GKKNV+I+QLKEHGEPHVVSIPISQI+TLASIR+LIPNDLLPLEARENTLKK
Sbjct: 661  CIVSKDGVGKKNVRIIQLKEHGEPHVVSIPISQINTLASIRVLIPNDLLPLEARENTLKK 720

Query: 721  ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHEAAKSTLVEQKLKAL 780
            ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHE A+STLVE+KLKAL
Sbjct: 721  ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHEVARSTLVEEKLKAL 780

Query: 781  HLKQELTAKIRSIKKTLRSSSALAFKDELKARKRVLRRLGYISSDDVVELKGKVACEISS 840
            HLKQELTAKIRSIKK LRSSS LAFKDELKARKRVLRRLGYI+SDDVVELKGKVACEISS
Sbjct: 781  HLKQELTAKIRSIKKQLRSSSVLAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISS 840

Query: 841  ANELTLSELMFNGIFKDIKVEEVVALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV 900
            ANELTLSELMFNG+FKDIKVEE+VALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV
Sbjct: 841  ANELTLSELMFNGVFKDIKVEEIVALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV 900

Query: 901  AKVQLECKVEIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE 960
            AKVQLECKVEIDVEGFV+SFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE
Sbjct: 901  AKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE 960

Query: 961  VLQQLILAAKSIGETELETKFEEAVSKIKRDIVFAASLYL 1001
            VLQQLILA+KSIGETELETKFEEAVSKIKRDIVFAASLYL
Sbjct: 961  VLQQLILASKSIGETELETKFEEAVSKIKRDIVFAASLYL 994

[Close]
BLAST of Clc06G03460 vs. ExPASy TrEMBL
Match: A0A0A0KFR7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109760 PE=4 SV=1)

HSP 1 Score: 1862.8 bits (4824), Expect = 0.0e+00
Identity = 954/1000 (95.40%), Postives = 975/1000 (97.50%), Query Frame = 0 

Query: 1    MGSSKRKLVDDAPRQSSPKQHRANARANVEDEPVACVHDVSYPEGSFNPLPSSSISSTGE 60
            MG SKRKL+DD  RQ SPKQHR N  A +E EPVAC+HDVSYPEGSFNPLPSSS+SSTGE
Sbjct: 1    MGPSKRKLLDDDSRQPSPKQHRTNVPAILEHEPVACLHDVSYPEGSFNPLPSSSLSSTGE 60

Query: 61   KLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT 120
            +LEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT
Sbjct: 61   ELEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT 120

Query: 121  SPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAW 180
            SPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAW
Sbjct: 121  SPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAW 180

Query: 181  IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHHQPCHIVY 240
            IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHHQPCHIVY
Sbjct: 181  IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHHQPCHIVY 240

Query: 241  TDYRPTPLQHYIFPSGGEGLYLVVDEKGHFREDSFQKALNALVPVSDSDKKKENNGKWQK 300
            TDYRPTPLQHYIFPSG EGLYLVVDEKGHFREDSFQKALNALVPVSD DKKKENNGKWQK
Sbjct: 241  TDYRPTPLQHYIFPSGSEGLYLVVDEKGHFREDSFQKALNALVPVSDGDKKKENNGKWQK 300

Query: 301  SLTLGKTGEESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKLDLNGDDEKANIE 360
            SLTLGKTGE+SDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKLDLNGDDEK NIE
Sbjct: 301  SLTLGKTGEDSDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKLDLNGDDEKVNIE 360

Query: 361  TIFWSAMDMLSDDDKKLPQASHSFSVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL 420
            TIFWSAMDMLSDDDKKLPQ      VSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL
Sbjct: 361  TIFWSAMDMLSDDDKKLPQ------VSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL 420

Query: 421  IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRGIC 480
            IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRGIC
Sbjct: 421  IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRGIC 480

Query: 481  ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRSEDGDPENLLRNSFYQFQAD 540
            ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRSEDG+PENLLRNSFYQFQAD
Sbjct: 481  ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRSEDGNPENLLRNSFYQFQAD 540

Query: 541  RNIPNLEKRVKSLEEERDSIVIEEEDNLKNYYDLLKQYKSLKKDIRDIVLSPRYCLPFLQ 600
            RNIPNLEK+VKSLEEERDSIVIEEED+LKNYYDLL QYKSLKKDIR+IVLSPRYCLPFLQ
Sbjct: 541  RNIPNLEKQVKSLEEERDSIVIEEEDSLKNYYDLLNQYKSLKKDIRNIVLSPRYCLPFLQ 600

Query: 601  PGRLVSIECNSNDEISSTFSIKDQVTWGLIINFQRVKGVSEDDASMKPESANYTVDILTR 660
            PGRLVSIECN NDEISSTFSIKDQVTWGLIINFQRVKGVSE+DASMKPESANYTVD+LTR
Sbjct: 601  PGRLVSIECNRNDEISSTFSIKDQVTWGLIINFQRVKGVSEEDASMKPESANYTVDVLTR 660

Query: 661  CIVSKDGIGKKNVKIVQLKEHGEPHVVSIPISQISTLASIRILIPNDLLPLEARENTLKK 720
            CIVSKDGIGKKNV+I+QLKEHGEPHVVSIPISQI+TLASIRILIPNDLLPLEARENTLKK
Sbjct: 661  CIVSKDGIGKKNVRIIQLKEHGEPHVVSIPISQINTLASIRILIPNDLLPLEARENTLKK 720

Query: 721  ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHEAAKSTLVEQKLKAL 780
            ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHE AKSTLVE+KLKAL
Sbjct: 721  ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHEVAKSTLVEEKLKAL 780

Query: 781  HLKQELTAKIRSIKKTLRSSSALAFKDELKARKRVLRRLGYISSDDVVELKGKVACEISS 840
            HLKQELTAKIRSIKK LRSSS LAFKDELKARKRVLRRLGY +SDDVVELKGKVACEISS
Sbjct: 781  HLKQELTAKIRSIKKQLRSSSVLAFKDELKARKRVLRRLGYTTSDDVVELKGKVACEISS 840

Query: 841  ANELTLSELMFNGIFKDIKVEEVVALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV 900
            ANELTLSELMFNG+FKD KVEE+VALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV
Sbjct: 841  ANELTLSELMFNGVFKDTKVEEIVALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV 900

Query: 901  AKVQLECKVEIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE 960
            AKVQLECKVEIDVEGFV+SFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE
Sbjct: 901  AKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE 960

Query: 961  VLQQLILAAKSIGETELETKFEEAVSKIKRDIVFAASLYL 1001
            VLQQLILA+KSIGETELETKFEEAVSKIKRDIVFAASLYL
Sbjct: 961  VLQQLILASKSIGETELETKFEEAVSKIKRDIVFAASLYL 994

[Close]
BLAST of Clc06G03460 vs. ExPASy TrEMBL
Match: A0A6J1L2B4 (DExH-box ATP-dependent RNA helicase DExH9-like OS=Cucurbita maxima OX=3661 GN=LOC111499210 PE=4 SV=1)

HSP 1 Score: 1857.0 bits (4809), Expect = 0.0e+00
Identity = 947/1000 (94.70%), Postives = 974/1000 (97.40%), Query Frame = 0 

Query: 1    MGSSKRKLVDDAPRQSSPKQHRANARANVEDEPVACVHDVSYPEGSFNPLPSSSISSTGE 60
            MGSSKRK+V+D PR+SSPK HR N    VEDEPVACVHDVSYPEGS+NPLPS ++SSTGE
Sbjct: 1    MGSSKRKVVEDTPRESSPKHHRTNESVMVEDEPVACVHDVSYPEGSYNPLPSINLSSTGE 60

Query: 61   KLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT 120
            KLEPAKVFPFSLDPFQSEAIKCLE GESVMVSAHTSAGKTVVALYAI+MSLRNKQRVIYT
Sbjct: 61   KLEPAKVFPFSLDPFQSEAIKCLEIGESVMVSAHTSAGKTVVALYAISMSLRNKQRVIYT 120

Query: 121  SPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAW 180
            SPIKALSNQKYREFKEEFSDVGLMTGDVTI+PNASCLVMTTEIWRSMQYKGSE+TREVAW
Sbjct: 121  SPIKALSNQKYREFKEEFSDVGLMTGDVTIEPNASCLVMTTEIWRSMQYKGSEITREVAW 180

Query: 181  IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHHQPCHIVY 240
            IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVH QPCHIVY
Sbjct: 181  IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHRQPCHIVY 240

Query: 241  TDYRPTPLQHYIFPSGGEGLYLVVDEKGHFREDSFQKALNALVPVSDSDKKKENNGKWQK 300
            TDYRPTPLQHYIFPSGGEGLYLVVDEKGHFREDSFQKALNALVP SD  KKKENNGKWQK
Sbjct: 241  TDYRPTPLQHYIFPSGGEGLYLVVDEKGHFREDSFQKALNALVPASDGYKKKENNGKWQK 300

Query: 301  SLTLGKTGEESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKLDLNGDDEKANIE 360
            SLTLGKT EESDIFKMVKMIIQRQYDPVI+FSFSKRECEFLAMQMAKLDLNGDDEKANIE
Sbjct: 301  SLTLGKTNEESDIFKMVKMIIQRQYDPVIIFSFSKRECEFLAMQMAKLDLNGDDEKANIE 360

Query: 361  TIFWSAMDMLSDDDKKLPQASHSFSVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL 420
            TIFWSAMDMLSDDDKKLPQ      VSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL
Sbjct: 361  TIFWSAMDMLSDDDKKLPQ------VSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL 420

Query: 421  IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRGIC 480
            IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGID+RGIC
Sbjct: 421  IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDERGIC 480

Query: 481  ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRSEDGDPENLLRNSFYQFQAD 540
            ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIR EDG+PENLLRNSFYQFQAD
Sbjct: 481  ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRCEDGNPENLLRNSFYQFQAD 540

Query: 541  RNIPNLEKRVKSLEEERDSIVIEEEDNLKNYYDLLKQYKSLKKDIRDIVLSPRYCLPFLQ 600
            RNIPNLEK+VKSLEEERDSIVIEEEDNLKNYYDLLKQYKSLKKDIRDIVLSPRYCLP+LQ
Sbjct: 541  RNIPNLEKQVKSLEEERDSIVIEEEDNLKNYYDLLKQYKSLKKDIRDIVLSPRYCLPYLQ 600

Query: 601  PGRLVSIECNSNDEISSTFSIKDQVTWGLIINFQRVKGVSEDDASMKPESANYTVDILTR 660
            PGRL+SIEC+SN+EISSTFSIKDQ TWGLIINFQR+KGVSEDDASMKPESANYTVD+LTR
Sbjct: 601  PGRLISIECDSNNEISSTFSIKDQFTWGLIINFQRMKGVSEDDASMKPESANYTVDVLTR 660

Query: 661  CIVSKDGIGKKNVKIVQLKEHGEPHVVSIPISQISTLASIRILIPNDLLPLEARENTLKK 720
            C+VSKDGIGKKNVKIVQLKEHGEPHVVSIPISQISTLASIRILIPNDLLPLEARENTLKK
Sbjct: 661  CVVSKDGIGKKNVKIVQLKEHGEPHVVSIPISQISTLASIRILIPNDLLPLEARENTLKK 720

Query: 721  ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHEAAKSTLVEQKLKAL 780
            ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHE AKS LV+QKLKAL
Sbjct: 721  ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHEVAKSALVDQKLKAL 780

Query: 781  HLKQELTAKIRSIKKTLRSSSALAFKDELKARKRVLRRLGYISSDDVVELKGKVACEISS 840
            HLKQELTAKIRSIKKT+RSSSALAFKDELKARKRVLRRLGYI+SDDVVELKGKVACEISS
Sbjct: 781  HLKQELTAKIRSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISS 840

Query: 841  ANELTLSELMFNGIFKDIKVEEVVALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV 900
            ANELTLSELMFNG+FKDIKVEE++ALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV
Sbjct: 841  ANELTLSELMFNGVFKDIKVEEIIALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV 900

Query: 901  AKVQLECKVEIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE 960
            AK QLECKVEIDVEGFV+SFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE
Sbjct: 901  AKAQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE 960

Query: 961  VLQQLILAAKSIGETELETKFEEAVSKIKRDIVFAASLYL 1001
            VLQQL LAAKSIGETELETKFEEAVSKIKRDIVFAASLYL
Sbjct: 961  VLQQLTLAAKSIGETELETKFEEAVSKIKRDIVFAASLYL 994

[Close]
BLAST of Clc06G03460 vs. ExPASy TrEMBL
Match: A0A6J1H3H0 (DExH-box ATP-dependent RNA helicase DExH9-like OS=Cucurbita moschata OX=3662 GN=LOC111460149 PE=4 SV=1)

HSP 1 Score: 1856.6 bits (4808), Expect = 0.0e+00
Identity = 948/1000 (94.80%), Postives = 974/1000 (97.40%), Query Frame = 0 

Query: 1    MGSSKRKLVDDAPRQSSPKQHRANARANVEDEPVACVHDVSYPEGSFNPLPSSSISSTGE 60
            MGSSKRK+V+D PR+SSPK  R N  A VEDEPVACVHDVSYPEGS+NPLPS ++SSTGE
Sbjct: 1    MGSSKRKVVEDTPRESSPKHQRTNEPAMVEDEPVACVHDVSYPEGSYNPLPSINLSSTGE 60

Query: 61   KLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT 120
            KLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT
Sbjct: 61   KLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYT 120

Query: 121  SPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAW 180
            SPIKALSNQKYREFKEEFSDVGLMTGDVTI+PNASCLVMTTEIWRSMQYKGSE+TREVAW
Sbjct: 121  SPIKALSNQKYREFKEEFSDVGLMTGDVTIEPNASCLVMTTEIWRSMQYKGSEITREVAW 180

Query: 181  IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHHQPCHIVY 240
            IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVH QPCHIVY
Sbjct: 181  IIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHQQPCHIVY 240

Query: 241  TDYRPTPLQHYIFPSGGEGLYLVVDEKGHFREDSFQKALNALVPVSDSDKKKENNGKWQK 300
            TDYRPTPLQHYIFPSGGEGLYLVVDE+GHFREDSFQKALNALVP SD  KKKENNGKWQK
Sbjct: 241  TDYRPTPLQHYIFPSGGEGLYLVVDERGHFREDSFQKALNALVPASDGYKKKENNGKWQK 300

Query: 301  SLTLGKTGEESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKLDLNGDDEKANIE 360
            SLTLGKT EESDIFKMVKMIIQRQYDPVI+FSFSKRECEFLAMQMAKLDLNGDDEKANIE
Sbjct: 301  SLTLGKTNEESDIFKMVKMIIQRQYDPVIIFSFSKRECEFLAMQMAKLDLNGDDEKANIE 360

Query: 361  TIFWSAMDMLSDDDKKLPQASHSFSVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL 420
            TIFWSAMDMLSDDDKKLPQ      VSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL
Sbjct: 361  TIFWSAMDMLSDDDKKLPQ------VSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGL 420

Query: 421  IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRGIC 480
            IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGID+RGIC
Sbjct: 421  IKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDERGIC 480

Query: 481  ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRSEDGDPENLLRNSFYQFQAD 540
            ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIR EDG+PENLLRNSFYQFQAD
Sbjct: 481  ILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRCEDGNPENLLRNSFYQFQAD 540

Query: 541  RNIPNLEKRVKSLEEERDSIVIEEEDNLKNYYDLLKQYKSLKKDIRDIVLSPRYCLPFLQ 600
            RNIPNLEK+VKSLEEERDSIVIEEEDNLKNYYDLLKQYKSLKKDIRDIVLSPRYCLPFLQ
Sbjct: 541  RNIPNLEKQVKSLEEERDSIVIEEEDNLKNYYDLLKQYKSLKKDIRDIVLSPRYCLPFLQ 600

Query: 601  PGRLVSIECNSNDEISSTFSIKDQVTWGLIINFQRVKGVSEDDASMKPESANYTVDILTR 660
            PGRL+SIEC+SN+EISSTFSIKDQ TWGLIINFQR+KGVSEDDASMKPESANYTVD+LTR
Sbjct: 601  PGRLISIECDSNNEISSTFSIKDQFTWGLIINFQRMKGVSEDDASMKPESANYTVDVLTR 660

Query: 661  CIVSKDGIGKKNVKIVQLKEHGEPHVVSIPISQISTLASIRILIPNDLLPLEARENTLKK 720
            C+VSKDGIGKKNVKIVQLKEHGEPHVVSIPISQI TLASIRILIPNDLLPLEARENTLKK
Sbjct: 661  CVVSKDGIGKKNVKIVQLKEHGEPHVVSIPISQIRTLASIRILIPNDLLPLEARENTLKK 720

Query: 721  ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHEAAKSTLVEQKLKAL 780
            ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHE AKS LV+QKLKAL
Sbjct: 721  ISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHEVAKSALVDQKLKAL 780

Query: 781  HLKQELTAKIRSIKKTLRSSSALAFKDELKARKRVLRRLGYISSDDVVELKGKVACEISS 840
            HLKQELTAKIRSIKKT+RSSSALAFKDELKARKRVLRRLGYI+SDDVVELKGKVACEISS
Sbjct: 781  HLKQELTAKIRSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISS 840

Query: 841  ANELTLSELMFNGIFKDIKVEEVVALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV 900
            ANELTLSELMFNG+FKDIKVEE++ALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV
Sbjct: 841  ANELTLSELMFNGVFKDIKVEEIIALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRV 900

Query: 901  AKVQLECKVEIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE 960
            AK QLECKVEIDVEGFV+SFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE
Sbjct: 901  AKAQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEE 960

Query: 961  VLQQLILAAKSIGETELETKFEEAVSKIKRDIVFAASLYL 1001
            VLQQL LAAKSIGETELETKFEEAVSKIKRDIVFAASLYL
Sbjct: 961  VLQQLTLAAKSIGETELETKFEEAVSKIKRDIVFAASLYL 994

[Close]
BLAST of Clc06G03460 vs. TAIR 10
Match: AT1G59760.1 (RNA helicase, ATP-dependent, SK12/DOB1 protein )

HSP 1 Score: 1521.9 bits (3939), Expect = 0.0e+00
Identity = 780/1002 (77.84%), Postives = 887/1002 (88.52%), Query Frame = 0 

Query: 1    MGSSKRKLVDDAPRQSSPK--QHRANARANVEDEPVACVHDVSYPEGSFNPLPSSSISST 60
            MGS KRK V+++   + P+  Q   ++   + +E V CVHDVS+PE ++ PL  S     
Sbjct: 1    MGSVKRKSVEESSDSAPPQKVQREDDSTQIINEELVGCVHDVSFPE-NYVPLAPSV---- 60

Query: 61   GEKLEPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVI 120
                 PAK FPF+LD FQSEAIKCL+ GESVMVSAHTSAGKTVVA YAIAMSL+  QRVI
Sbjct: 61   -HNKPPAKDFPFTLDSFQSEAIKCLDNGESVMVSAHTSAGKTVVASYAIAMSLKENQRVI 120

Query: 121  YTSPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREV 180
            YTSPIKALSNQKYR+FKEEFSDVGLMTGDVTIDPNASCLVMTTEI RSMQYKGSE+ REV
Sbjct: 121  YTSPIKALSNQKYRDFKEEFSDVGLMTGDVTIDPNASCLVMTTEILRSMQYKGSEIMREV 180

Query: 181  AWIIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHHQPCHI 240
            AWIIFDEVHYMRD ERGVVWEESIVMAPKN+RFVFLSATVPNAKEFADWVAKVH QPCHI
Sbjct: 181  AWIIFDEVHYMRDSERGVVWEESIVMAPKNSRFVFLSATVPNAKEFADWVAKVHQQPCHI 240

Query: 241  VYTDYRPTPLQHYIFPSGGEGLYLVVDEKGHFREDSFQKALNALVPVSDSDKKKENNGKW 300
            VYTDYRPTPLQHY+FP+GG GLYLVVDEK  F EDSFQK+LNALVP ++SDKK++ NGK+
Sbjct: 241  VYTDYRPTPLQHYVFPAGGNGLYLVVDEKSKFHEDSFQKSLNALVPTNESDKKRD-NGKF 300

Query: 301  QKSLTLGKTGEESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKLDLNGDDEKAN 360
            QK L +GK GEESDIFK+VKMIIQRQYDPVILFSFSK+ECE LAMQM+K+ LN DDEK  
Sbjct: 301  QKGLVIGKLGEESDIFKLVKMIIQRQYDPVILFSFSKKECEALAMQMSKMVLNSDDEKDA 360

Query: 361  IETIFWSAMDMLSDDDKKLPQASHSFSVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQE 420
            +ETIF SA+DMLSDDDKKLPQ      VSN+LP+LKRGIGVHHSGLLPILKEVIEILFQE
Sbjct: 361  VETIFASAIDMLSDDDKKLPQ------VSNILPILKRGIGVHHSGLLPILKEVIEILFQE 420

Query: 421  GLIKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRG 480
            GLIKCLFATETFSIGLNMPAKTVVF+NVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRG
Sbjct: 421  GLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRG 480

Query: 481  ICILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRSEDGDPENLLRNSFYQFQ 540
            ICILMVDEK+EP+ AK MLKG+AD LNSAFHLSYNMLLNQ+R E+GDPENLLRNSF+QFQ
Sbjct: 481  ICILMVDEKMEPAVAKSMLKGSADSLNSAFHLSYNMLLNQLRCEEGDPENLLRNSFFQFQ 540

Query: 541  ADRNIPNLEKRVKSLEEERDSIVIEEEDNLKNYYDLLKQYKSLKKDIRDIVLSPRYCLPF 600
            ADR IP+LEK++KSLEEERDS+VIEEE++LKNYY+L+ QYKSLKKDIR+IV +P+YCLPF
Sbjct: 541  ADRAIPDLEKQIKSLEEERDSLVIEEEESLKNYYNLILQYKSLKKDIREIVFTPKYCLPF 600

Query: 601  LQPGRLVSIECNSNDEISSTFSIKDQVTWGLIINFQRVKGVSEDDASMKPESANYTVDIL 660
            L P R V ++C ++DE   +FSI+DQ TWG+I+ F +VK +SEDD S +PE ANYTVD+L
Sbjct: 601  LLPNRAVCLDCTNDDEEPQSFSIEDQDTWGVIMKFNKVKSLSEDDDSRRPEDANYTVDVL 660

Query: 661  TRCIVSKDGIGKKNVKIVQLKEHGEPHVVSIPISQISTLASIRILIPNDLLPLEARENTL 720
            TRC+VSKDG+GKK VK V +KE GEP VV++P+SQI +L+S  + IP DL+PLEAREN L
Sbjct: 661  TRCMVSKDGVGKKKVKAVPIKERGEPVVVTVPLSQIKSLSSAIMNIPKDLVPLEARENAL 720

Query: 721  KKISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHEAAKSTLVEQKLK 780
            KK+SE+LSR P G+P LDPE DMKI+SSSY+K VRR EALE+LF+KH+ AKS L+ +KLK
Sbjct: 721  KKVSELLSRHPDGIP-LDPEVDMKIKSSSYKKTVRRLEALENLFEKHKIAKSPLITEKLK 780

Query: 781  ALHLKQELTAKIRSIKKTLRSSSALAFKDELKARKRVLRRLGYISSDDVVELKGKVACEI 840
             L +K+EL AKI+S+KKT+RSS+ALAFKDELKARKRVLRRLGYI+SD+VVELKGKVACEI
Sbjct: 781  VLQMKEELIAKIKSLKKTVRSSTALAFKDELKARKRVLRRLGYITSDNVVELKGKVACEI 840

Query: 841  SSANELTLSELMFNGIFKDIKVEEVVALLSCFVWQEKLQDAAKPREELELLFIQLQDTAR 900
            SSA ELTL+ELMF+GIFKD KVEE+V+LLSCFVW+E+L DAAKPREEL+LLFIQLQDTAR
Sbjct: 841  SSAEELTLTELMFSGIFKDAKVEELVSLLSCFVWRERLPDAAKPREELDLLFIQLQDTAR 900

Query: 901  RVAKVQLECKVEIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRL 960
            RVA+VQL+CKVEIDVE FV SFRPDIMEAVYAWAKGSKFYE+MEI +VFEGSLIRAIRR+
Sbjct: 901  RVAEVQLDCKVEIDVESFVQSFRPDIMEAVYAWAKGSKFYEVMEIARVFEGSLIRAIRRM 960

Query: 961  EEVLQQLILAAKSIGETELETKFEEAVSKIKRDIVFAASLYL 1001
            EEVLQQLI+AAKSIGET+LE K EEAVSKIKRDIVFAASLYL
Sbjct: 961  EEVLQQLIVAAKSIGETQLEAKLEEAVSKIKRDIVFAASLYL 988

[Close]
BLAST of Clc06G03460 vs. TAIR 10
Match: AT2G06990.1 (RNA helicase, ATP-dependent, SK12/DOB1 protein )

HSP 1 Score: 893.6 bits (2308), Expect = 1.4e-259
Identity = 487/1008 (48.31%), Postives = 665/1008 (65.97%), Query Frame = 0 

Query: 3    SSKRKLVDDAPRQSSPKQHRANARANVEDEPVACVHDVSYPEGSFNPLPSSSISSTGEKL 62
            S   KL  D      P+  R + +        ACVH+V+ P   + P    +I  T +  
Sbjct: 17   SESSKLRSDETPTPEPRTKRRSLKR-------ACVHEVAVP-NDYTPTKEETIHGTLDNP 76

Query: 63   ----EPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVI 122
                + AK +PF LDPFQS ++ CLE  ES++VSAHTSAGKT VA YAIAM+ R+KQRVI
Sbjct: 77   VFNGDMAKTYPFKLDPFQSVSVACLERKESILVSAHTSAGKTAVAEYAIAMAFRDKQRVI 136

Query: 123  YTSPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREV 182
            YTSP+KALSNQKYRE + EF DVGLMTGDVT+ PNASCLVMTTEI R+M Y+GSEV +EV
Sbjct: 137  YTSPLKALSNQKYRELQHEFKDVGLMTGDVTLSPNASCLVMTTEILRAMLYRGSEVLKEV 196

Query: 183  AWIIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHHQPCHI 242
            AW+IFDE+HYM+DRERGVVWEESI+  P   + VFLSAT+ NA EFA+W+  +H QPCH+
Sbjct: 197  AWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICYLHKQPCHV 256

Query: 243  VYTDYRPTPLQHYIFPSGGEGLYLVVDEKGHFREDSFQKALNALVPVSDSDKKKENNGKW 302
            VYTD+RPTPLQHY FP GG GLYLVVD+   FREDSF K  +       +D KK  NGK 
Sbjct: 257  VYTDFRPTPLQHYAFPMGGGGLYLVVDDNEQFREDSFVKMQDTFPKPKSNDGKKSANGKS 316

Query: 303  QKSLTLGKTGE-ESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKLDLNGDDEKA 362
                  G  G  +SD++K+VKMI++R+++PVI+FSFS+RECE  A+ M+KLD N D+EK 
Sbjct: 317  GGRGAKGGGGPGDSDVYKIVKMIMERKFEPVIIFSFSRRECEQHALSMSKLDFNTDEEKE 376

Query: 363  NIETIFWSAMDMLSDDDKKLPQASHSFSVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQ 422
             +E +F +AM  L+++D+ LP      ++  MLPLL+RGI VHHSGLLP++KE++E+LFQ
Sbjct: 377  VVEQVFNNAMQCLNEEDRSLP------AIELMLPLLQRGIAVHHSGLLPVIKELVELLFQ 436

Query: 423  EGLIKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKR 482
            EGL+K LFATETF++GLNMPAKTVVF+ V+K+DGD  R++ SGEYIQMSGRAGRRG D+R
Sbjct: 437  EGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDER 496

Query: 483  GICILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLNQIRSEDGD--PENLLRNSFY 542
            GICI+M+DE++E +T + M+ G    L S F LSY  +LN +   +G    E+++R+SF+
Sbjct: 497  GICIIMIDEQMEMNTLRDMMLGKPAPLLSTFRLSYYTILNLLSRAEGQFTAEHVIRHSFH 556

Query: 543  QFQADRNIPNLEKRVKSLEEERDSIVIEEEDNLKNYYDLLKQYKSLKKDIRDIVLSPRYC 602
            QFQ ++ +P++  +V  LEEE   +    E  +  Y++L       +K +   ++ P   
Sbjct: 557  QFQHEKALPDIGNKVSKLEEEAAILNASGEAEVAEYHNLQFDIAKHEKKLMSEIIRPERV 616

Query: 603  LPFLQPGRLVSIECNSNDEISSTFSIKDQVTWGLIINFQRVKGVSEDDASMKPESANYTV 662
            L FL  GRLV I     D             WG+++N   VK  S    S       Y V
Sbjct: 617  LCFLDTGRLVKIREGGTD-----------WGWGVVVNV--VKNSSVGTGSASSHGGGYIV 676

Query: 663  DILTRCIV--SKDGIGKKNVKIVQLKEHGEPHVVSIPISQISTLASIRILIPNDLLPLEA 722
            D L  C    S++G   K     +  E GE HVV + +  IS L+ +RI +P+DL P+EA
Sbjct: 677  DTLLHCSTGFSENGAKPKPCP-PRAGEKGEMHVVPVQLPLISALSRLRISVPSDLRPVEA 736

Query: 723  RENTLKKISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHEAAKSTLV 782
            R++ L  + E+ SRFP G P L P +DM IQ +     V + E +E     H   KS   
Sbjct: 737  RQSILLALQELSSRFPLGFPKLHPVKDMNIQDTEIVDLVSQIEEVEQKLLAHPMHKSE-D 796

Query: 783  EQKLKALHLKQELTAKIRSIKKTLRSSSALAFKDELKARKRVLRRLGYISSDDVVELKGK 842
            +Q++K+   K E+  +I+ +K  +R S    F+DELK R RVL++LG+I +D VV++KG+
Sbjct: 797  DQQIKSFQRKAEVNYEIQQLKSKMRDSQLQKFRDELKNRSRVLKKLGHIDADGVVQVKGR 856

Query: 843  VACEISSANELTLSELMFNGIFKDIKVEEVVALLSCFVWQEKLQDAAKPREELELLFIQL 902
             AC I + +EL ++ELMFNG F D+   +V AL SCF+  +K  +    R EL     QL
Sbjct: 857  AACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSNEQVNLRNELTKPLQQL 916

Query: 903  QDTARRVAKVQLECKVEIDVEGFVNS-FRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLI 962
            QD+AR++A++Q ECK+EIDVE +V S  RP +M+ +Y+W+KG+ F EI+++T +FEGS+I
Sbjct: 917  QDSARKIAEIQHECKLEIDVEEYVESTIRPFLMDVIYSWSKGASFAEIIQMTDIFEGSII 976

Query: 963  RAIRRLEEVLQQLILAAKSIGETELETKFEEAVSKIKRDIVFAASLYL 1001
            R+ RRL+E L QL  AA+++GE+ LE+KF  A   ++R I+FA SLYL
Sbjct: 977  RSARRLDEFLNQLRAAAEAVGESSLESKFAAASESLRRGIMFANSLYL 995

[Close]
BLAST of Clc06G03460 vs. TAIR 10
Match: AT3G46960.1 (RNA helicase, ATP-dependent, SK12/DOB1 protein )

HSP 1 Score: 532.7 bits (1371), Expect = 6.3e-151
Identity = 357/998 (35.77%), Postives = 538/998 (53.91%), Query Frame = 0 

Query: 68   FPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYTSPIKALS 127
            FPF LD FQ EAI CLE GESV V+AHTSAGKTVVA YA A++ ++  R +YT+PIK +S
Sbjct: 357  FPFELDNFQKEAICCLEKGESVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTIS 416

Query: 128  NQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAWIIFDEVH 187
            NQKYR+F  +F DVGL+TGDV+I P ASCL+MTTEI RSM Y+G+++ R++ W+IFDEVH
Sbjct: 417  NQKYRDFCGKF-DVGLLTGDVSIRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVH 476

Query: 188  YMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHHQPCHIVYTDYRPTP 247
            Y+ D ERGVVWEE I+M P++  FV LSATVPN  EFADW+ +   +   +  T  RP P
Sbjct: 477  YVNDVERGVVWEEVIIMLPRHINFVLLSATVPNTFEFADWIGRTKQKEIRVTGTTKRPVP 536

Query: 248  LQHYIFPSGGEGLYLVVDEKGHF------REDSFQKALNALVPVS-----------DSDK 307
            L+H +F SG   LY V + +          +DS +K  +  V V+           D  K
Sbjct: 537  LEHCLFYSG--ELYKVCENEVFLSKGIKDAKDSQKKKNSNAVSVAPKQQMGSSAHQDGSK 596

Query: 308  KKE----NNGKWQKSLTLGKTGEE-----------------SDIFKMVKMIIQRQYDPVI 367
             ++    + GK  K  ++   G+                  S+   ++  + +    PV+
Sbjct: 597  SQKHEAHSRGKQNKHSSVKDVGKSSYSGNSQNNGAFRRSAASNWLLLINKLSKMSLLPVV 656

Query: 368  LFSFSKRECEFLAMQMAKLDLNGDDEKANIETIFWSAMDMLSDDDKKLPQASHSFSVSNM 427
            +F FSK  C+  A  +   DL    EK+ I      A   L   D+ LPQ      V  +
Sbjct: 657  VFCFSKNYCDRCADALTGTDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQ------VLRL 716

Query: 428  LPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFSNVRKF 487
              LL RGIGVHH+GLLPI+KEV+E+LF  G+IK LF+TETF++G+N PA+TVVF  +RKF
Sbjct: 717  QSLLHRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDALRKF 776

Query: 488  DGDKFRWLSSGEYIQMSGRAGRRGIDKRGICILMV-DEKLEPSTAKMMLKGNADCLNSAF 547
            DG +FR L  GEY QM+GRAGRRG+DK G  ++M  DE  + S  + ++ G+A  L S F
Sbjct: 777  DGKEFRQLLPGEYTQMAGRAGRRGLDKTGTVVVMCRDEVPDESDLRRVIVGSATRLESQF 836

Query: 548  HLSYNMLLNQIRSEDGDPENLLRNSFYQFQADRNIPNLEK--RVKSLEEERDSIVIEEED 607
             L+Y M+L+ +R E+   E++L+ SF +F A + +P  ++   +K     +    I+ E 
Sbjct: 837  RLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEKQQLLMIKRSLPTKHIECIKGEP 896

Query: 608  NLKNYYDLLKQYKSLKKDIRDIVLSPRYCLPFLQPGRLVSIECNSNDEISSTFSIKDQVT 667
             +++YYD+  +       + + V+   Y   FL  GR+V ++     +      +K    
Sbjct: 897  AIEDYYDMYMEANEYNNKMSEAVMQSPYAQSFLVQGRVVVMKSGMGIDNLLGIVLKGPSN 956

Query: 668  WG-----LIINFQ----RVKGVSEDDASMKPESANYTVDILTRC----IVSKDGIGKKNV 727
                   L+I  +        VS    S  P    +      R       +K    K  V
Sbjct: 957  TNRQYVVLVIKSEIPPPEKNMVSIGKKSSDPSQGYFIAPKSKRGFEEEFYTKPSSRKGPV 1016

Query: 728  KI-VQLKEHGEPHVVSIPISQISTLASIRIL---IPNDLLPL------EARENTLKKISE 787
             I ++L  HG    V   +        + I    I  D + L       A   T++++ +
Sbjct: 1017 VIKIELPYHGVAAGVGYEVKGFDNKEFLCICDSKIKIDQVRLLEDGNKAAFSQTVQQLLD 1076

Query: 788  VLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRTEALESLFDKHEAAKSTLVEQKLKALHLK 847
            + S   K  P LDP +D+K++ +   +   +   L      ++      +E+ +K     
Sbjct: 1077 LKSDGNKFPPALDPVKDLKLKDAELVETYYKWTNLLQKMSMNKCHGCVKLEEHMKLAREI 1136

Query: 848  QELTAKIRSIKKTLRSSSALAFKDELKARKRVLRRLGYISSDDVVELKGKVACEISSANE 907
            ++    ++ ++  + S  AL      + R  VL+ +G I  D VV++KG+VACE++S  E
Sbjct: 1137 KKHKTDLKDLEFQM-SDEALLQMPAFQGRIDVLKNIGCIDDDLVVQIKGRVACEMNSGEE 1196

Query: 908  LTLSELMFNGIFKDIKVEEVVALLSCFVWQEKLQDAAKPREELELLFIQLQDTARRVAKV 967
            L  +  +F   F++++ EE VA++S FV+Q+K   A     +L     +L DTA R+ ++
Sbjct: 1197 LICTVCLFENQFEELEPEEAVAIMSAFVFQQKNTSAPTLTPKLAKAKQRLYDTAIRLGEL 1256

Query: 968  QLECKVEIDVEGFV-NSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVL 1001
            Q +  ++ID E +   + +  ++E VY WAKG+ F EI E+T V EG ++R I RL+E  
Sbjct: 1257 QAQYNLQIDPEEYAQENLKFGLVEVVYEWAKGTPFAEICELTDVPEGLIVRTIVRLDETC 1316

[Close]
BLAST of Clc06G03460 vs. TAIR 10
Match: AT1G70070.1 (DEAD/DEAH box helicase, putative )

HSP 1 Score: 255.8 bits (652), Expect = 1.5e-67
Identity = 177/528 (33.52%), Postives = 263/528 (49.81%), Query Frame = 0 

Query: 63  EPAKVFPFSLDPFQSEAIKCLETGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYTSP 122
           E   ++ F +D FQ  AI+    G SV+VSA TS+GKT++A  A   ++   +R+ YT+P
Sbjct: 146 ELISIYDFRIDKFQRLAIEAFLRGSSVVVSAPTSSGKTLIAEAAAVSTVAKGRRLFYTTP 205

Query: 123 IKALSNQKYREFKEEFSD--VGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTR---- 182
           +KALSNQK+REF+E F D  VGL+TGD  I+ +A  ++MTTEI R+M Y+   +      
Sbjct: 206 LKALSNQKFREFRETFGDDNVGLLTGDSAINKDAQIVIMTTEILRNMLYQSVGMASSGTG 265

Query: 183 --EVAWIIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHHQ 242
              V  I+ DEVHY+ D  RG VWEE ++  PK  + + LSATV N  E A W+ ++H +
Sbjct: 266 LFHVDAIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGEIHGK 325

Query: 243 PCHIVYTDYRPTPLQHYIFPSGGEGLYLVVDEKG-------------------HFR--ED 302
              +V +  RP PL  Y   S    L  ++DEKG                    FR  +D
Sbjct: 326 -TELVTSTRRPVPLTWYF--STKHSLLPLLDEKGINVNRKLSLNYLQLSASEARFRDDDD 385

Query: 303 SFQK----------ALNALVPVSDSDKKKENNGKWQKSLTLGKTGEESDIFKMVKMIIQR 362
            ++K          + N LV V+D    K    K ++S       +   I   +  +  +
Sbjct: 386 GYRKRRSKKRGGDTSYNNLVNVTDYPLSKNEINKIRRS-------QVPQISDTLWHLQGK 445

Query: 363 QYDPVILFSFSKRECEFLAMQMAKLDLNGDDEKANIETIFWSAMDMLSDDDKKLPQASHS 422
              P I F F++R C+     +    L  D EK+ +E        +  D  ++  +    
Sbjct: 446 NMLPAIWFIFNRRGCDAAVQYVENFQLLDDCEKSEVELALKKFRVLYPDAVRESAEKG-- 505

Query: 423 FSVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVF 482
                    L RGI  HH+G LP+ K  IE LFQ GL+K +FATET + G+NMPA+T V 
Sbjct: 506 ---------LLRGIAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVI 565

Query: 483 SNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRGICILMVDEKLEPSTAKMMLKGNADC 542
           S++ K  G++   L   E  QM+GRAGRRGID++G  +L+            ++      
Sbjct: 566 SSLSKKAGNERIELGPNELYQMAGRAGRRGIDEKGYTVLVQTAFEGAEECCKLVFAGVKP 625

Query: 543 LNSAFHLSYNMLLNQIRSEDGDPENLLRNSFYQFQADRNIPNLEKRVK 552
           L S F  SY M+LN +       ++    +    QA R++   +K V+
Sbjct: 626 LVSQFTASYGMVLNLVAGSKVTRKSSGTEAGKVLQAGRSLEEAKKLVE 652

[Close]
BLAST of Clc06G03460 vs. TAIR 10
Match: AT5G61140.1 (U5 small nuclear ribonucleoprotein helicase )

HSP 1 Score: 108.2 bits (269), Expect = 3.8e-23
Identity = 121/501 (24.15%), Postives = 212/501 (42.32%), Query Frame = 0 

Query: 23  ANARANVEDEPVACVHDVSYPEGSFNPLPSSSISSTGEKLEPAKVFPF---------SLD 82
           AN+ A    +     H   Y E    P P++ +    + +E  ++  F         SL+
Sbjct: 450 ANSLALALPQGTVRKHLKGYEEVFIPPTPTAQMKPGEKLIEIKELDDFAQAAFHGYKSLN 509

Query: 83  PFQSEAIKCL-ETGESVMVSAHTSAGKTVVALYAIAMSL----------RNKQRVIYTSP 142
             QS   + +  T E+++V A T AGKT +A+ ++   +          +N+ +++Y +P
Sbjct: 510 RIQSRIFQTVYHTNENILVCAPTGAGKTNIAMISVLHEIKQHFRDGYLHKNEFKIVYVAP 569

Query: 143 IKALSNQKYREFKEEFSDVGL----MTGDVTID----PNASCLVMTTEIWRSMQYKGSEV 202
           +KAL+ +    F    + + +    +TGD+ +          +V T E W  +  K S++
Sbjct: 570 MKALAAEVTSAFSRRLAPLNMVVKELTGDMQLTKTELEETQMIVTTPEKWDVITRKSSDM 629

Query: 203 TRE--VAWIIFDEVHYMRDRERGVVWEESIVMAPKNA-------RFVFLSATVPNAKEFA 262
           +    V  +I DEVH + D +RG V E  +    +         R V LSAT+P+  + A
Sbjct: 630 SMSMLVKLLIIDEVHLLND-DRGAVIEALVARTLRQVESTQTMIRIVGLSATLPSYLQVA 689

Query: 263 DWVAKVHHQPCHIVYTDYRPTPL-QHYIFPSGGEGLYLVVDEKGHFREDSFQKALNALVP 322
            ++            + YRP PL Q YI                   E +F  A N L+ 
Sbjct: 690 QFLRVNTDTGLFYFDSSYRPVPLAQQYI----------------GITEHNF-AARNELL- 749

Query: 323 VSDSDKKKENNGKWQKSLTLGKTGEESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQ 382
                    N   ++K +   K G ++ IF   +    +  + ++           LA Q
Sbjct: 750 ---------NEICYKKVVDSIKQGHQAMIFVHSRKDTSKTAEKLV----------DLARQ 809

Query: 383 MAKLDLNGDDEKANIETIFWSAMDMLSDDDKKLPQASHSFSVSNMLPLLKRGIGVHHSGL 442
              LDL  ++     + +     D++   +K            +++   + G G+HH+G+
Sbjct: 810 YETLDLFTNETHPQFQLM---KKDVMKSRNK------------DLVKFFEAGFGIHHAGM 869

Query: 443 LPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWLSSG--EY 484
           L   + + E LF +GL+K L  T T + G+N+PA TVV    + +D     W   G  + 
Sbjct: 870 LRSDRTLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDAKAGGWKDLGMLDV 897

The following BLAST results are available for this feature:
BLAST of Clc06G03460 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038874774.10.0e+0096.60DExH-box ATP-dependent RNA helicase DExH9 isoform X1 [Benincasa hispida][more]
XP_008458145.10.0e+0095.70PREDICTED: DExH-box ATP-dependent RNA helicase DExH9 [Cucumis melo] >TYK14014.1 ... [more]
XP_004140482.10.0e+0095.40DExH-box ATP-dependent RNA helicase DExH9 [Cucumis sativus] >KGN46581.1 hypothet... [more]
KAG6575215.10.0e+0095.00DExH-box ATP-dependent RNA helicase DExH9, partial [Cucurbita argyrosperma subsp... [more]
XP_023548429.10.0e+0095.00DExH-box ATP-dependent RNA helicase DExH9-like [Cucurbita pepo subsp. pepo][more]
BLAST of Clc06G03460 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9XIF20.0e+0077.84DExH-box ATP-dependent RNA helicase DExH9 OS=Arabidopsis thaliana OX=3702 GN=MTR... [more]
P422851.8e-29654.28Exosome RNA helicase MTR4 OS=Homo sapiens OX=9606 GN=MTREX PE=1 SV=3[more]
Q9CZU31.2e-29554.18Exosome RNA helicase MTR4 OS=Mus musculus OX=10090 GN=Mtrex PE=1 SV=1[more]
O142326.1e-27652.41ATP-dependent RNA helicase mtr4 OS=Schizosaccharomyces pombe (strain 972 / ATCC ... [more]
P470474.2e-26949.42ATP-dependent RNA helicase DOB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 ... [more]
BLAST of Clc06G03460 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CSJ20.0e+0095.70DExH-box ATP-dependent RNA helicase DExH9 OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A1S3C6P70.0e+0095.70DExH-box ATP-dependent RNA helicase DExH9 OS=Cucumis melo OX=3656 GN=LOC10349767... [more]
A0A0A0KFR70.0e+0095.40Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109760 PE=4 SV=1[more]
A0A6J1L2B40.0e+0094.70DExH-box ATP-dependent RNA helicase DExH9-like OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1H3H00.0e+0094.80DExH-box ATP-dependent RNA helicase DExH9-like OS=Cucurbita moschata OX=3662 GN=... [more]
BLAST of Clc06G03460 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G59760.10.0e+0077.84RNA helicase, ATP-dependent, SK12/DOB1 protein [more]
AT2G06990.11.4e-25948.31RNA helicase, ATP-dependent, SK12/DOB1 protein [more]
AT3G46960.16.3e-15135.77RNA helicase, ATP-dependent, SK12/DOB1 protein [more]
AT1G70070.11.5e-6733.52DEAD/DEAH box helicase, putative [more]
AT5G61140.13.8e-2324.15U5 small nuclear ribonucleoprotein helicase [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 536..563
NoneNo IPR availableGENE3D2.40.30.300coord: 600..731
e-value: 1.2E-24
score: 89.1
NoneNo IPR availableGENE3D1.10.3380.30coord: 778..991
e-value: 2.5E-72
score: 244.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availablePANTHERPTHR12131:SF7EXOSOME RNA HELICASE MTR4coord: 54..999
NoneNo IPR availablePANTHERPTHR12131ATP-DEPENDENT RNA AND DNA HELICASEcoord: 54..999
NoneNo IPR availableCDDcd18795SF2_C_Ski2coord: 244..485
e-value: 2.92972E-57
score: 191.998
IPR012961ATP-dependent RNA helicase Ski2, C-terminalSMARTSM01142DSHCT_2coord: 823..1000
e-value: 1.7E-84
score: 296.7
IPR012961ATP-dependent RNA helicase Ski2, C-terminalPFAMPF08148DSHCTcoord: 826..995
e-value: 4.3E-48
score: 163.0
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 68..251
e-value: 7.1E-34
score: 128.5
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 80..236
score: 23.058733
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 384..473
e-value: 2.9E-17
score: 73.3
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 395..473
e-value: 3.7E-5
score: 24.0
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 312..520
score: 12.455874
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 74..221
e-value: 1.1E-18
score: 67.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 38..244
e-value: 1.0E-84
score: 284.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 245..505
e-value: 8.4E-86
score: 289.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 83..487
IPR016438ATP-dependent RNA helicase Ski2-likePIRSFPIRSF005198SKI2coord: 5..1000
e-value: 0.0
score: 1268.5
IPR025696rRNA-processing arch domainPFAMPF13234rRNA_proc-archcoord: 527..798
e-value: 1.7E-71
score: 241.2

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc06G03460.2Clc06G03460.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000460 maturation of 5.8S rRNA
biological_process GO:0006401 RNA catabolic process
cellular_component GO:0005634 nucleus
molecular_function GO:0005524 ATP binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003724 RNA helicase activity
molecular_function GO:0003676 nucleic acid binding