Clc06G03260 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G03260
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Alanine-tRNA ligase
Location	ClcChr06: 3389909 .. 3401930 (+)
RNA-Seq Expression	Clc06G03260
Synteny	Clc06G03260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAAGAAAAGAAAAAGCCCTCAACGCCAGCAGGAGCATCGAGCAGAACCCGGGGCGGGGCTCAGTGAAACCAAGTTTTTAGAATCGAGCATACATATATAATCCACCGAGGAAGAAACTCTGTTGCAATGGCGATGGATGCTGGATCATCGCCCTCCCAAGAAAATCAATCATTTTCTTCCCGTCTCCATGAATCTTCTCCAGGAAAACCTCAATCATTGGAAGACTTAGCTAAGCCTTGGGCTGAGTACGCAGCTCAACAGGCCCTGCTATACCAGCGGGCTATCGACCAATCCTTGGAGTCTGCCATTCAAGCCTCCAAATCTCGCCTTTCTCAGATTCGTTCCGCCTCCTATCCTCATTTCCAGAAGGCCATTGTAATTTCTCTATCTCCGTTTTTCCCGTTGTTCTTTGTTTAGTTTCCAATTAAGAATGGATGTTAGTTTAGGTCTCCAAGAAAAAGGGATAGAAAGGTTTTGAATCGTCACTCCACCTCCAAATCTGTTTTTCCTGTTGTTCTCTATCTCTGGTTGACCGATGCTTGTTGTGTATAATTTGATTTCATTATATCTAATAGTTAAAATAGCCCCAGTGGGTGGCCGTTGGCAAGGGCTTGGGGTCTCTTGGGTCCAACATGCAAACCTTCAAGTTGAGTTTAATACCAAAAACATTAAAACATCACCTGTGTCCGAGCCTTGGGGGGTGCAGATGGCCCGGAGTAAAGCTGAATAACCGAACTCCAGAACTAGCCTGTTGAATGATTTTTTGAAGGCTCTCTTAGAGTTTTTTGATCAAAATTGTTGGCTTTGGAAATAAATGAAGATTGCAAGTGATGACTAGCTGGGCTGTTTGTGCGATGTAGGAAATGTGCAGGAATTTAGTGAGCCAACGTAAGTCTGCATGCATTTCTTAAGTTCAACTAATGTTTTTGGCACATAGAACGAGAAGCGTTAGTTCGTATTTATTTCTTTCTAGGGTTGCTTATGAAAATGCTTTTCTTGCCTCTTGCAAGAATTTTAGATTTTTATTTTCTTGTCAGTTAGCTTTGTAGTAGGGAGATTTTATACAGTTTCCTGCTGCAGTTCTTTCCCCCAAGTGTAAGGGAGGGTGATTGAGTAGCAGCTTTCGAAAAGTTCAAGTTGGACTGAAGAAAAAGACTCGTTCATCAGTTTTGATATTGGTTGCATAGTCAATGTTCAAATGAAAGCATTTCTTTGTTTAATTGGTAAAATCATTTTCATCTAGTTGGTAGATTTAGATGCATTCAACAAATTATGTGACAACTTTGGAGGCAAGCTATGATTGGACAGTCAGGCTGCATAACACATTAACCTGATTTCTTGTATGGAGCCATAAAACTTTTATTGGACTTGTTAGGTTGTACAACTGTGTCCTTGACTTCTAAGGTTTTAGAAACCCTCTTCTTTATTTGAAGTTTGCGTATTTTGGGGTTACATTTTGCTGATCTTCAACTCTCTAACATGTAAATAACAATGAGGGACAAGTGGGGTCAAAACTATGGGGGCAGTGTTTGAAATGGTAGCATTGTAACCATCATGGGTTGGCCTAATGGTACTGGTAAAAAAGGAAATATAGTCTCAATAAATGGCTAAGAGGTTATGGGTTCAATCCATGGTGGCCACCTACCTAGGATTTAATATCCTATGAGTTTCCTTGACACCCAAATTTTGTAGAATCAGGCGGGTTGTCCCAAAAAAAGAAATGGTAGCATTGTAGTTTTCTTGAAGCTTTTAATGTGAGACTGGATTTTCCCCATTGAAGGGTTCATAAAAAATATAGGTGCATAATGATTGATATCATAGTTTTGAGTAAGGGTGTAAACGGTTTGGTTCGGCTCGATTTTTATAGAAAATTGGAACTGAACTGATCAATCGGTTAAGGAAATCTGGAACTTGAAACCGAACTGGGTTCAAGGATAAACCGCATTGCCCGACTGCTCAGATTGATGGTTTGAGCGGGTCTGTTCCCAGTTTATGGCATATAATGCGCGCATGGGGAAGATGGAATGGTTCTTTAGAAATTTCGAAAGTAAAACGAAATTTTGCCCACCACAAGTTTCAAACTCACGACCTTAAGTCCATACCAAGGTGATTTTTGATGCTAAATGTCAATGCCTAATATATATATATTTTTATTGGTCAGCTCGGTTTTACAATTAGTTTTTTCAGCCTAACTTGAACCCGACCACAAAATTTCGGTTTTGTATATTTTGAACCTGAAGCTGCCGATCCGAACAATGAGTGGTTTCGGTCGGTTTAGGTGGTTTTGTTAGTTTTTATTTATTTATTTACTTTTCCTTGCACCCCTAGTATTGGGGAAATAGCAAGAACTCCTGCGAAGAAAATGAATGGAACAGAACATTCTTAATGTTTTAGCTAGCTGGATGGTGTTGGGGTTGATATTTTTCCAATAAGTTTGGGCAGTTATATATAATGCAAGATAGAAGTGGTCAGAGTCATAAGGCTCCATTTGATTACCATTTGGATTTCTTTAATTGAAAAGAAAAACAAATGGTTCTTGATAACCATTTGGTTTTTCAAAATTGTGCTTGTTATCTTACAATTTTTTTACAATGTTCCACACCTTTCTAAAGAAAATATTTGAATTCTTAGCTAAATTCAAAAATCAAAAACAAATTCTTAAAAACTATTTAAAATTTTTCTTAAATTTTATTTTAGTTTTCAACACTCAAAACCAAAAACCAAATGGTCTTCAAAGGGGCCATAGGTGATGCATGATGTGATCTAATTGTATTCAGCAGACAATAGAGTTTTCTACCGAAAATCTTGCTGCATTTTAGTTATTTATAGATAATGCATTCTGTCTCAGTGGAGGGTTCTAAATTCGTTGAATTTTATAGTCTATGATGGTTCTGTTCCTTGTACTTTGAATAATCTTGTTTTGGCTTTTTCTTAATTAGTAAAAAAAAATTGATTTTTCTTGTTGGAACCTGAATGAAATATCCAAATAGTACAAAATATGCCCATAAACAGGATTGCAGAATATTCCTCCAACTAAATACAAGGAAATTTAAGTTGTAATGATTGAGGGGCTGTATATCAAAAAAAGGAATTGAAAATGGATGATTCAAGAACATCCCCCGGGGATCTTTCTTTTCCTTTGAAAAGTCCTAGAATTTCTCTCCTATCATATCTTCCAAAGAATGGCTCTGATAATGCTAGCCCATAAATGCCCTTTTGTTGCCTTAAAAGGGTGATCATTGAACAACGTTATAATCCACACAGTTGTGACGAACGGAGCAGCAATATGCCAACCAACAGCCCAGAGCAGCATAAGAACAATGGAAGAAGATATGATTTTCAGGTTCATTATCCTTTTTGCAAAGGCAGCATCAGGAAGAAGAAATTTGATGCCAAGGGCATCTTTTTTTGGAACCTATCCAGTGTACTGAGGCAGGAGTGGACAATTTCCCAGAGAAGAACTTGACTCTCTTTGGACAAGGAAATCTCCACAATTGTTTGAAGAGATCCTTCATGGATGAAGTTGTTCCCAAGGCAACGTGTGATATTAACGATTTGACAATAAAAAAGCCATTGTTATCCAAATTCCAGTCCAAATGTCCTCCCTCAGTGTGTTACTGAGAGTGGGATGGGTTGATTTAAGGAGACCCATTTGGAAATTTCATCCTCCTTAAAGTTTCTTCTAAAGTTCAGCACCCAAGATGAGTAATCAAATATTGGAATTTAAGATGCAAGTTATATGCTTGTTTTATCTCGTCTTGATGCCATTTACATGCCCTAATCATTGAAAGCTCTTGTTTCTTACAATAAATAATTGTAATTTATATTATTTCATTTTATTTTCTTGCCAAAATAAATGATACAAACTCTTTATAATGGAGACCTCATTTGATGGTACCTTGTTCATTCTCTGATTGCCTACTTTTGACTCTGTTTTTATGCATTGAAAATATGCCTCTAGGATTCCTTTTGGGAGGCAAGGTCCGAGCTTGCTGCTTATGAGAACTTATTATTTGGAAAAATTAGAGGTTTGTTCCTCATTTATCATTGTGATGGAAAATTGATTATTAACTTACCTTTCTTCTTTCTTTTCTTTTTTCCCCCTCAAATATTTAAATAACTGAATATTGTTGTTTTAAATTTCTTCTGCAGATGGTATTCTTGTTGCTGCATCACATCCGCTAATCAGTTGTGGAGTTGCAACTGGCATGGGTTTCTTAGTCTTTAAAAGTATGATATCATTTATTGAATGGTTTTGATTTTACAAGATCTTTTAATGGGTAGTTATAAATTCATAGATTTGTTTACTTCAAATACATTCTTTGTCTAATCATTTTTTCATATTTCATATCTCCCAATATTAATTGCTTTCCAATGACACCAAATTATTCAAGCATGTTAGAAATGATTTTGAATTTTTATCTAATTAAATCTTCGAAAAGCACGCACCTTATTGCACTTTAATAAATTCATAGTTCACCTAGATTTGGAGTGGTACATGAAACTTGTAACATTCTGAATCTTGAGCATTTATTTTTCAATAGTACTAATATTCTGTTTGATCTTGCAGAGCCCAGAAATTTCTTATACTACAAAACCGTTCGACTTTTTGTGAATGAAGAGGTGAGCAAATTTTGATTTATCATAATTAAAAAGAAAAATAAAGAAAAATAAAGAGAAAAAAAAGTTTAATAAGTGGAGCTCCAGGTAGAGGCTCTGTATTCAGATATGTACTAATCATTGAAAGCTTGTTGTCACTGGTTCCTTTTGAGCTCATCTTCCCAAATCTGCTTTCTCATAAATTAATGTTCTTGTATCTGAGGTTGTGAATTGCCAAGTCAACCTTTTCTATGGTTAAAGGCTCTATCATAGCAATTCGATGATGTACCTTCAGTAGCTTTACCTCATCCTTAATTTTTTATAAGAATTTTAGCAGTCTGTCTTGATATTTGAAAACCTGACATAAAATATTGGGAGTTAGATAGGATAGTTTGTATGATAGTCGACCTACCTCCCTTTGAGAATATGATGTTTTTTAACATTTCTCTGATATTCTAGAGAATCCTTCCACTACAAGGTCCCGGGAAGGGAAAGGCTTGCATCCAAGGGGCATGCCAAGATAATCGAGTAGGAGGCTTCCAATTGTGGCAAAGGATTCCAGTTTTTCCTCAACTGTTTTATAGTGGTCAATAATAAAGCCTGGGAGAGTAGTTTTGGGCCTTTTGGCTAACGTTGATCCTCCTACCAGGAGCTAATTTGGAGATTATTAGTATGCCAATGTTCCTGTGAAGCTCATCATCATCATAGTCATTAAAAATTCAGATGTTAGCTATGAAGGAAAATGATTGATGGGAATCGGAAAACTTTTAAATACCCTATTGCTCAGGATGTGAAACGTCTATTGAGAAACTAGGCTACTGCCTGCAGTTGTTCAATCAGAAACATCATAGCAACTTCATCCAATCTGACTTGGACAAGATCACGAACGTGACAAGATCACGAACGTGGGCTCAAACCTTCCAAGTATGATAATATCTGTACTGAGTTGATTCCCTAAAGCTAACAACTCTCCTTTGGTTGGAACCACATGAACATGCTTCAGATTGACTCCAAGTCATCACTCTTGGGCTGGAAGTTTTCCTTTCCATTCAACAAGTTAGACAGAAGCAGAGGAAGTTTGTGCTCAAGTGCAACCTGGACTCAAGGACACAGTTTTACAGCCTATAGAACAGATTCTGTTCAAGTAAGATCTGTTCTCAACAGAATGAAATATGTGCAACTTGATCAATAGGAAGGCCAAACGCCTGTCTGATTGATGTTAGTTCATCCAATAGGTGAAGTACCTAGATTGGCTCGCAGACACGGCAGTAGTGAAGAACAGAAAATAGAGGGTCTACAGAGACTGTTAAGGTTATGAACAAGGCATGCCCAAGGATTATTTTCCACTCTCATGGACACCTAAGGCTACCTCTAGATTTCATGCTTCCAGTTAACCAAGAGAATATTGCATATCATCGTGCAAATTAATAAGTAATGCTCTTTGCCCTGAAGAGTGGGAGGGCAACGCAGACTACCCAACCAAATGTTCAATGACCAATTTAATTTGACGATTACTGGATTATTGTCCTAAACTCAATTTAACATGATCGTTGTGTAACATGAACCCTAAACCTTAAACTCAAATTACCCTAAACGTCTAAAAGAATTTGTGTTTCTCCCTTGAGCCCAATTCCTTTTGTAACATGATCGTTGCCAATAGGTTTCATCCTCATCCTTTTGAATGATTGTTGGGCAGAGTTAAAGGCATTTACTATGAAAGGATATTTCTAAGGAGCTTCCTTCTTTCACTCATTTGGTATGTTGTGTGATGGGGGAGGACAAAATGTGTACTTTTGAGAAGATTAGTGAGTGGGGGATAGACCCCTCTGCTCTATGTTCCTTCATCTCTATCATCCTACTTCCTTAAAAAACCATGTGGTGTCTGGCTTTTAGTTTGATGATTTGGTCGGGGAGCTCCTTTTCTTTTCATTCAAGTTTTGTCACTCTTCATTCAATAGGGAGCCACGAGGGTTGTCTCTCTTCCATCCATGCTTGAGGTGTTTGTTTCTAGACATGGGAGAAGGGACATTTGTGTGTGAAGTCCCAACCCTTTTTGGAGGGATTCTCATGCAATTCCTTTTTTTGTAGTTTGATAGAGCCTTCTCCCTTACTTGAGTGAGTCTAAGGGGTCCTGTATAATCACCACTCCCCTAATAGGAAACGTGTACATGTATATACACCCAAAAATTCACTCTTTTCACACCAGCATGTAGTTCTATACTAACTTTGGCGTCAAATTTCTTTGGTTGACATCCACTTGAAACATGTTTGATTTATTACTTTTGCTCCAGAGCAACTAACTTTGATTCTTCTGATTTTTCAGCCACCGCATTAGGGCTGAAAATGAGCTGTAACTCATGTGTTCAAATCTGTATCATAATTCATACGTTACCACTACCTTGCATTGCGCATATTTATATATATAGATTCTTTATATTCCAATTAAATTTTACTTATTTATATGACGTTATTTAGGCTCTAAAGTTTAAAATGTTAAAACTGTGAATTAGAATTGGAATGTTAAAAAATATAATTTGAAACAAGATTATCTATGTCAAATAATGTTTATTTAAATTAGTTGTTTCCCAACTAACTTAGTCTATTATTTATCTAAAGCTGACTGTTATTTTAGACATCTGCTCATGGATGCACACACATATGGCGGTTGGGAATTTCCCTTACGTAGGATAGATTTTTTATCCTAATATATCGTGCATGATTTTTACCAGTACATTGGCATTCTGTTTCTTAGTAAAAAGTTGGTATATTAGGATAGTAAAAATTATCCTAATGTATCGTGCATGGTTTTTTTTATTATATACTTGAATTTTAATAATATTTACTAGAGCATGTTTTCTGCCTTGAAGGATGAAATATTTTCCTACAATTAGAGCTTTCTTAAAATTAGTGTCAGCTACTCCTATAGAGGAAACCCATGCCCAATTTGAACAAAACATTTTAATTGTATTCATGAAATAGTATCCATCCCCAATTCATTTCCACATACTAAATCTGCCCAAATTGTAATTCATTCTATCACTGGGCATTCCATCTCATTATACCATTCTAAATTTAATTAATTTATCCTGTTATTCCAACTTTTACAAATTTTATTCTTTCTTTACTGGATTATCATATGGAAAGTTCCATCTTTGTATTGGTTTTGCAGTCCTTATTTTCCAAAGCTGATGCTAAAGTAAAAGAGTTGCGACAATCAATTGATCGGATAAAGGTTGAAAGTGAGAGGCTGGAGGTAGGATTATATATTTCTCTTAAATCCTCAATTCATCATTGCTGATTGAAGAATTAGTAAAATTGTCACATGAATATCTGTGTTTATTAAATTGAAAAGAAAAATAATTCTTTTTGGGGAAATGCCACTTTTACAATGTATAAGATATCGATACAAGGTTTGATAGAACTTATTATAAAGTCTTTGCGTAGAAACTTCGAAGCTAATGGAGAAACTTGACGGCTTGTATAGTACTTTGGTATGGAGGAACAAGAGTGAAGATTCAAGAGAAAAGAAATAAAAGCTTTGTTGTTTTAGTAGAGTCATGGGGAGCTAGGTTGCTTGGCAGAGACGATTATGATGAATGTTAGAATACCATCAACATTGGAAATTCTTTAGTAACATAAACATTGCAGAAGGATCAGTTGGTGTGACGACTAGCAACCAAGGAGACTTGTATTTGGTTATCTACATCCCTATCATCTGATATAAGGGAGATTGGCCCTTGGGTTTTCAGGAGAAGGTATGGAAATTGTGCCAGAGTTCATCCACATTAGCTTGTGAGGCTTCGTAAAAGATACAATTTTCAATGAGAGAGGAGGTCATGGAAGTATGCTGAAAGGTTGTTGGATGGTTGATGGTGATGAATGAGAATGGAGAACTATTTTTAGAGGGGAAGGAGGGGACACTGCCTTTTATTATAGTGGAGGGAGACTCAAAACATTAAATTTTTTAGGAAAAACAATCAGACTCACCTTAATTCATTCAGTTTTGAGTGGGATTGCCATCTACTTCTCTCTTTTTACAGCTCATGTTCGGTGTGTAACAGCCTGAAGAAACTTATGAGAGATTTACTATGGGAAGGTATGGAGGAGGCAAAACAGCTCACTTGATGAATTGGGAAACTATTGGCAAACGAACACCTGGGAGGGTTGGAGCTAGGGAGTTTAAGGGCTCGTAATAATACCTTATTGGAAAAATGGTTATGGTGTTTTCCCCACGAGTCGTCTTCCCTGTAATCTAGGATTATTACAAGCATGGTCCTCATCCTTTTGATTGGATTTTGGGTTGGATTAAAGGCACATTCAGAAATCCATGGAAAGAGATTTCTTCGAATCTCTCCTCTTTCTTTGAGTTGATTCGTTATGTGGTGGGAGATGGGTTTGGGACTTACATCTAGGAGAATAGGTGGTTGGGAGATCGCCCCTGTTGTAATAGGTTTCCTCATCATCATCTTTCTGCTAAGAAAAATTGTTTTGTTGCGGATGTTCTGTTGCTTTCAGGGAGCTCACTCTCTTTCTTGTTTGGTTTTCGTCGTCATTCATTCAATAGAAAAATGAATGACGGAGGTTATGACCCCCCTTTCTTTATTAGGGATGTTGAGGTTAGGTAAGGAAGAAAGGAAACTCGTTGTTGGAGTGTTATCCCTTCCAAGGGTTTCTCTTATAAATCTCTCTTTCAATGTTTACTAGATCCTTCTCCCTTCAGAGAGTTGGCTTTCTCTGTTCTTTGGAAGGTGAAAATTTAAAGAAGGTGAAGTTCCTTTTTTTGGCAGGTTATTCATGGATACCTTGGACAGGCTTTCGGAGAAGATGTCGTCCTTGGTTGTGGGCCTTTCTGCTGTACTCTTTGTTGGAGGGTGGAGGAAGATCTGAATCACTTATTTTGGAATTGTACTTATGTGCTATCGGTTTGGAAACATCTTCTTTAGGCTGTTTGACTATTAGATATAGCCTATCACAAAGATTTTAGTACTTTATGATCAAGTTCTTCCTCCAGCCACTGTTTGAAGGGAGAGGGGGTATTTTATGGAAGGGTGGGGTATGTGCTATTGTGGGGCATTTGGGGTGAGATAAATAATAGTATCTTACTATCTTTTGTGGGGTTGAGAGGGAACCTTTCGATGTTTGGTCCCTGGAAAATTTTAATGTTTCTCTCTAAGAGTCTGACAGTACTTTTCGTAACTGTTTGCTTGGTCATATCTTGTTAGGATGGAGACTCCTCTTTTTCCGGTGCTCCCTTTTGTGGTTATTTATTTATTTATATATATATATTTTTAAGCCCTTGTATTCTTTTATTTTTTCTCAATGAAAGTTGATCTTTTATTAAAAAAAGAAAAGTCAGTGGAATGGTAAAGGATGTCTGTATGAACTCAGATGTGCTTCCATCATGATTACTTCTCATTATTGGAAGCATACCGAAGTTAATTATTGAGGATTCCATTCATTATTAATCCATTGAAGACTAGTTACAATCACCATGTTCACAAAAGGGCTCATCTGCAAGAATGGGGACTCACGTACAGCAAGAAGAATTCTATACCTCCGTGGAAATATCTTGTTGGGGACAACCATTTGCTCCCAGTTAGCTCCGTCTTTTTGCTTTTGATACTGATCTGACTGTATGGATGTATAAATGAGGTAAGTTGACTTTGCTGACATGGCATATACCTGAGCAAGGATGTGGTAACATGACTTGATGTATCATATGAAAGAAGCTCACATGGAAAGAGTATCATTATGGATTGTAGGGTTAAAACAGAAAGCATCCAGAAAGGAATTATATTTCTCTTTTGTACAATTTGCAGCTGAATTTGTCAGTTTTTCCATGTTTTGAATTGTTTGTACTCTAGGAATGAAAAATTACTTGCTTTTCTATAATTTTCATTTCAGAAAAGAACACTTCAAGCTCAAGAGGAATTGATACGAGGGAGAACAAAACTCAGGTTCGCTCTAGAAAGTTGCTAATGAGCTGTTAGAAATAATTACCGTATCGTACCCCTTCTCATTTCATATTCTTTTGCAGGCAAGCAGGAAAACAGATTGAAGGTGTGATTCAGTCGGCTTATAAAATTGAAAGAAAGGCAAGAGGTATACAAAGGGGTTCTCTAGACATGTTAAAATTGAAGGATGGTTAGAACAGTGCACGGAATTTTTGCTACAATCTTGTTTCACACTATTGTTTGTGTACCATGTCATCAGGTTTAAAAGATATTCTTGCAGATCTTCCCACAAGGGAAGCTTCACGACTTAGGACCCAGGTACATTCCATTTGACTGTTCACTTCTTTGATAGTGTTGCATCCTCGTTGAAGACTGTTGAGTGAGGTCTTTGCATTCTCTTTTTCAAAGTATTGATTGAATTGAGAATGTTTAGCATTTGGTTAGAAGAAACTCCAGAGTATGCAGCCTACGAACTTTTAGTTCTTCCTCGCAGTTTTATATTTTTTATAGTCATCAATCCCCCATCCTTTTTATGATAATTTTCATTTGTGATGTATTGAAAACCCAGCGTGTGAGTGTGCACATAGATGAAATAAATTCAATTTTTACTCTACATAAATCAATTGTAATCTTAAATTTTTAATTTCATCCATTTTAAACCTTATACTAGGATATGCGACCCTTCTCCCTCTCCCAGGTTCTAAGTATTTTCATGATTGGGGCTGGGCATTTATTTGGCATGATTTTGGTTGTTTTGTCAATTAAATTTTCTATGCTTTATTGGTTGGTTCATGAGTGATATTAATTTTAAGACTTGTTCAAGTTCAAGGTTTAAATCCATGGAATTGAAGGTTAAAACTGACCAAAAAATATGGTATACATCAAACCTTTCCCTTTATATTTCAATATACCCTAATCTTGGACTCTGCATTGCAGGTTTCTAACCTTGCTTCTGAGGCAAAGAAGGAAAGAATTGGCTTGAGCAAGGAGGTCTCGAAAATAAGCGACTACGGCATCTCCGTCTGATAAATTCAAATCCAACATTTGGCTCAACCTCAAGAATATTACTCCATCTCAAAATTCACTTGGTTTTGTCTGAAACCACTACCTGCATATCCTCTCTCATCCTTGTTTTTCCTTTCATTTTCTATTGGAGAAGGATGAGTTCTTTTTTCTTCTTTTTATAGTGCTTGGCCAAAATAAGTTTTGAAGGCTATCTATGAAAGGTGAAATTGATTGTTCAGTATAATAATCGTAGATGCAATACCAGTAGAGTTGGTTCTTTTGATAGAATCATTATCCTAACAAACTCTTCTTCTACTTGTATATTTATTTCCAATGGTCATGGAAGTGGATGGCAAAATTAAGCATAACAAATTTTACTTGGTTAAGATTCAAAATTACAATGTGAAAGGTGGAAATAAATTAGGATACCAATTCAAAATCATCTCTTGTACTAAGAATTG

mRNA sequence

AAGAAAGAAAAGAAAAAGCCCTCAACGCCAGCAGGAGCATCGAGCAGAACCCGGGGCGGGGCTCAGTGAAACCAAGTTTTTAGAATCGAGCATACATATATAATCCACCGAGGAAGAAACTCTGTTGCAATGGCGATGGATGCTGGATCATCGCCCTCCCAAGAAAATCAATCATTTTCTTCCCGTCTCCATGAATCTTCTCCAGGAAAACCTCAATCATTGGAAGACTTAGCTAAGCCTTGGGCTGAGTACGCAGCTCAACAGGCCCTGCTATACCAGCGGGCTATCGACCAATCCTTGGAGTCTGCCATTCAAGCCTCCAAATCTCGCCTTTCTCAGATTCGTTCCGCCTCCTATCCTCATTTCCAGAAGGCCATTGATTCCTTTTGGGAGGCAAGGTCCGAGCTTGCTGCTTATGAGAACTTATTATTTGGAAAAATTAGAGATGGTATTCTTGTTGCTGCATCACATCCGCTAATCAGTTGTGGAGTTGCAACTGGCATGGGTTTCTTAGTCTTTAAAAAGCCCAGAAATTTCTTATACTACAAAACCGTTCGACTTTTTGTGAATGAAGAGATTGACTCCAAGTCATCACTCTTGGGCTGGAAGTTTTCCTTTCCATTCAACAAGTTAGACAGAAGCAGAGGAAGTTTGTGCTCAAGTGCAACCTGGACTCAAGGACACAGTTTTACAGCCTATAGAACAGATTCTGTTCAATCCTTATTTTCCAAAGCTGATGCTAAAGTAAAAGAGTTGCGACAATCAATTGATCGGATAAAGGTTGAAAGTGAGAGGCTGGAGAAAAGAACACTTCAAGCTCAAGAGGAATTGATACGAGGGAGAACAAAACTCAGGCAAGCAGGAAAACAGATTGAAGGTGTGATTCAGTCGGCTTATAAAATTGAAAGAAAGGCAAGAGGTTTAAAAGATATTCTTGCAGATCTTCCCACAAGGGAAGCTTCACGACTTAGGACCCAGGTTTCTAACCTTGCTTCTGAGGCAAAGAAGGAAAGAATTGGCTTGAGCAAGGAGGTCTCGAAAATAAGCGACTACGGCATCTCCGTCTGATAAATTCAAATCCAACATTTGGCTCAACCTCAAGAATATTACTCCATCTCAAAATTCACTTGGTTTTGTCTGAAACCACTACCTGCATATCCTCTCTCATCCTTGTTTTTCCTTTCATTTTCTATTGGAGAAGGATGAGTTCTTTTTTCTTCTTTTTATAGTGCTTGGCCAAAATAAGTTTTGAAGGCTATCTATGAAAGGTGAAATTGATTGTTCAGTATAATAATCGTAGATGCAATACCAGTAGAGTTGGTTCTTTTGATAGAATCATTATCCTAACAAACTCTTCTTCTACTTGTATATTTATTTCCAATGGTCATGGAAGTGGATGGCAAAATTAAGCATAACAAATTTTACTTGGTTAAGATTCAAAATTACAATGTGAAAGGTGGAAATAAATTAGGATACCAATTCAAAATCATCTCTTGTACTAAGAATTG

Coding sequence (CDS)

ATGGCGATGGATGCTGGATCATCGCCCTCCCAAGAAAATCAATCATTTTCTTCCCGTCTCCATGAATCTTCTCCAGGAAAACCTCAATCATTGGAAGACTTAGCTAAGCCTTGGGCTGAGTACGCAGCTCAACAGGCCCTGCTATACCAGCGGGCTATCGACCAATCCTTGGAGTCTGCCATTCAAGCCTCCAAATCTCGCCTTTCTCAGATTCGTTCCGCCTCCTATCCTCATTTCCAGAAGGCCATTGATTCCTTTTGGGAGGCAAGGTCCGAGCTTGCTGCTTATGAGAACTTATTATTTGGAAAAATTAGAGATGGTATTCTTGTTGCTGCATCACATCCGCTAATCAGTTGTGGAGTTGCAACTGGCATGGGTTTCTTAGTCTTTAAAAAGCCCAGAAATTTCTTATACTACAAAACCGTTCGACTTTTTGTGAATGAAGAGATTGACTCCAAGTCATCACTCTTGGGCTGGAAGTTTTCCTTTCCATTCAACAAGTTAGACAGAAGCAGAGGAAGTTTGTGCTCAAGTGCAACCTGGACTCAAGGACACAGTTTTACAGCCTATAGAACAGATTCTGTTCAATCCTTATTTTCCAAAGCTGATGCTAAAGTAAAAGAGTTGCGACAATCAATTGATCGGATAAAGGTTGAAAGTGAGAGGCTGGAGAAAAGAACACTTCAAGCTCAAGAGGAATTGATACGAGGGAGAACAAAACTCAGGCAAGCAGGAAAACAGATTGAAGGTGTGATTCAGTCGGCTTATAAAATTGAAAGAAAGGCAAGAGGTTTAAAAGATATTCTTGCAGATCTTCCCACAAGGGAAGCTTCACGACTTAGGACCCAGGTTTCTAACCTTGCTTCTGAGGCAAAGAAGGAAAGAATTGGCTTGAGCAAGGAGGTCTCGAAAATAAGCGACTACGGCATCTCCGTCTGA

Protein sequence

MAMDAGSSPSQENQSFSSRLHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDQSLESAIQASKSRLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAASHPLISCGVATGMGFLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRGSLCSSATWTQGHSFTAYRTDSVQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTKLRQAGKQIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKKERIGLSKEVSKISDYGISV

Homology

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BLAST of Clc06G03260 vs. NCBI nr
Match: XP_008459726.1 (PREDICTED: uncharacterized protein LOC103498769 [Cucumis melo])

HSP 1 Score: 429.9 bits (1104), Expect = 1.9e-116
Identity = 246/312 (78.85%), Postives = 254/312 (81.41%), Query Frame = 0


Query: 1   MAMDAGSSPSQENQSFSSRLHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDQSLESA 60
           MAMDAGSS SQENQS  S  HESS  KPQSLEDLAKPWAEYAAQQALLYQRAID SLESA
Sbjct: 1   MAMDAGSSSSQENQSSPSYHHESSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60

Query: 61  IQASKSRLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAASHPLISCG 120
           I+ASKSRLSQIRS SYPHFQKAIDSFWEA+SELAAYENL+FGKIRDGILVAASHPLISCG
Sbjct: 61  IEASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCG 120

Query: 121 VATGMGFLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRGSLCSSAT 180
           VATGMGFLVFKKPR+FLYYKTVRLF+NEE                               
Sbjct: 121 VATGMGFLVFKKPRSFLYYKTVRLFMNEE------------------------------- 180

Query: 181 WTQGHSFTAYRTDSVQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK 240
                           SL SKADAKVKELRQSIDRIKVESERLEKRTLQA+EELIRGRTK
Sbjct: 181 ----------------SLLSKADAKVKELRQSIDRIKVESERLEKRTLQAEEELIRGRTK 240

Query: 241 LRQAGKQIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKKERIGLSK 300
           LRQAGKQIEGVIQSA+KIERKARGLKDILADLPTREASR RTQVSNLASEAKKERIGLSK
Sbjct: 241 LRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNLASEAKKERIGLSK 265

Query: 301 EVSKISDYGISV 313
           EVSKIS+YGISV
Sbjct: 301 EVSKISNYGISV 265

[Close]

BLAST of Clc06G03260 vs. NCBI nr
Match: TYK24760.1 (uncharacterized protein E5676_scaffold266G003230 [Cucumis melo var. makuwa])

HSP 1 Score: 426.4 bits (1095), Expect = 2.1e-115
Identity = 244/310 (78.71%), Postives = 252/310 (81.29%), Query Frame = 0


Query: 3   MDAGSSPSQENQSFSSRLHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDQSLESAIQ 62
           MDAGSS SQENQS  S  HESS  KPQSLEDLAKPWAEYAAQQALLYQRAID SLESAI+
Sbjct: 1   MDAGSSSSQENQSSPSYHHESSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESAIE 60

Query: 63  ASKSRLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAASHPLISCGVA 122
           ASKSRLSQIRS SYPHFQKAIDSFWEA+SELAAYENL+FGKIRDGILVAASHPLISCGVA
Sbjct: 61  ASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCGVA 120

Query: 123 TGMGFLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRGSLCSSATWT 182
           TGMGFLVFKKPR+FLYYKTVRLF+NEE                                 
Sbjct: 121 TGMGFLVFKKPRSFLYYKTVRLFMNEE--------------------------------- 180

Query: 183 QGHSFTAYRTDSVQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTKLR 242
                         SL SKADAKVKELRQSIDRIKVESERLEKRTLQA+EELIRGRTKLR
Sbjct: 181 --------------SLLSKADAKVKELRQSIDRIKVESERLEKRTLQAEEELIRGRTKLR 240

Query: 243 QAGKQIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKKERIGLSKEV 302
           QAGKQIEGVIQSA+KIERKARGLKDILADLPTREASR RTQVSNLASEAKKERIGLSKEV
Sbjct: 241 QAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNLASEAKKERIGLSKEV 263

Query: 303 SKISDYGISV 313
           SKIS+YGISV
Sbjct: 301 SKISNYGISV 263

[Close]

BLAST of Clc06G03260 vs. NCBI nr
Match: XP_011656867.1 (RGS1-HXK1-interacting protein 1 isoform X1 [Cucumis sativus] >KGN46566.2 hypothetical protein Csa_005221 [Cucumis sativus])

HSP 1 Score: 426.0 bits (1094), Expect = 2.8e-115
Identity = 242/312 (77.56%), Postives = 253/312 (81.09%), Query Frame = 0


Query: 1   MAMDAGSSPSQENQSFSSRLHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDQSLESA 60
           MAMDAGSS SQENQS  S  H+SS  KPQSLEDLAKPWAEYAAQQALLYQRAID SLESA
Sbjct: 1   MAMDAGSSSSQENQSSPSYHHQSSSPKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60

Query: 61  IQASKSRLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAASHPLISCG 120
           I+ SKSRLSQIRS S+PHFQKA+DSFWEA+SELAAYENL+FGKIRDGILVAASHPLISCG
Sbjct: 61  IEVSKSRLSQIRSTSFPHFQKAVDSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCG 120

Query: 121 VATGMGFLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRGSLCSSAT 180
           VATGMGFLVFKKPRNFLYYKT+RLFVNEE                               
Sbjct: 121 VATGMGFLVFKKPRNFLYYKTIRLFVNEE------------------------------- 180

Query: 181 WTQGHSFTAYRTDSVQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK 240
                           SL SKADAKVKELRQSIDRIKVESERLEKRTLQA++ELIRGRTK
Sbjct: 181 ----------------SLLSKADAKVKELRQSIDRIKVESERLEKRTLQAEDELIRGRTK 240

Query: 241 LRQAGKQIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKKERIGLSK 300
           LRQAGKQIEGVIQSA+KIERKARGLKDILADLPTREASR RTQVSNLASEAKKERIGLSK
Sbjct: 241 LRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNLASEAKKERIGLSK 265

Query: 301 EVSKISDYGISV 313
           EVSKIS+YGISV
Sbjct: 301 EVSKISNYGISV 265

[Close]

BLAST of Clc06G03260 vs. NCBI nr
Match: XP_011656868.1 (RGS1-HXK1-interacting protein 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 418.3 bits (1074), Expect = 5.8e-113
Identity = 241/312 (77.24%), Postives = 251/312 (80.45%), Query Frame = 0


Query: 1   MAMDAGSSPSQENQSFSSRLHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDQSLESA 60
           MAMDAGSS SQENQS  S  H+SS  KPQSLEDLAKPWAEYAAQQALLYQRAID SLESA
Sbjct: 1   MAMDAGSSSSQENQSSPSYHHQSSSPKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60

Query: 61  IQASKSRLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAASHPLISCG 120
           I+ SKSRLSQIRS S+PHFQK  DSFWEA+SELAAYENL+FGKIRDGILVAASHPLISCG
Sbjct: 61  IEVSKSRLSQIRSTSFPHFQK--DSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCG 120

Query: 121 VATGMGFLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRGSLCSSAT 180
           VATGMGFLVFKKPRNFLYYKT+RLFVNEE                               
Sbjct: 121 VATGMGFLVFKKPRNFLYYKTIRLFVNEE------------------------------- 180

Query: 181 WTQGHSFTAYRTDSVQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK 240
                           SL SKADAKVKELRQSIDRIKVESERLEKRTLQA++ELIRGRTK
Sbjct: 181 ----------------SLLSKADAKVKELRQSIDRIKVESERLEKRTLQAEDELIRGRTK 240

Query: 241 LRQAGKQIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKKERIGLSK 300
           LRQAGKQIEGVIQSA+KIERKARGLKDILADLPTREASR RTQVSNLASEAKKERIGLSK
Sbjct: 241 LRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNLASEAKKERIGLSK 263

Query: 301 EVSKISDYGISV 313
           EVSKIS+YGISV
Sbjct: 301 EVSKISNYGISV 263

[Close]

BLAST of Clc06G03260 vs. NCBI nr
Match: XP_038875078.1 (LOW QUALITY PROTEIN: RGS1-HXK1-interacting protein 1 [Benincasa hispida])

HSP 1 Score: 416.8 bits (1070), Expect = 1.7e-112
Identity = 240/312 (76.92%), Postives = 248/312 (79.49%), Query Frame = 0


Query: 1   MAMDAGSSPSQENQSFSSRLHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDQSLESA 60
           +AMDAGS  SQENQS  S  HESSPGKPQSLEDLAK  AEYAAQQALLY RAID  L+SA
Sbjct: 24  LAMDAGSPSSQENQSSPSYHHESSPGKPQSLEDLAKRLAEYAAQQALLYXRAIDHXLKSA 83

Query: 61  IQASKSRLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAASHPLISCG 120
           I+ASKSRLSQIRS SYPHFQKAID FWE +SELAAYEN+LFGKIRDGILVAASHPLISCG
Sbjct: 84  IEASKSRLSQIRSTSYPHFQKAIDFFWEGKSELAAYENVLFGKIRDGILVAASHPLISCG 143

Query: 121 VATGMGFLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRGSLCSSAT 180
           VATGMGFLVFKKPRNFLYY+T+RLFVNEE                               
Sbjct: 144 VATGMGFLVFKKPRNFLYYRTIRLFVNEE------------------------------- 203

Query: 181 WTQGHSFTAYRTDSVQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK 240
                           SL SKADA VKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK
Sbjct: 204 ----------------SLLSKADANVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK 263

Query: 241 LRQAGKQIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKKERIGLSK 300
           LRQAGKQIEGVIQSAYKIERKARGLKDILADLPTREASR RTQVSNLASEAKKERIGLSK
Sbjct: 264 LRQAGKQIEGVIQSAYKIERKARGLKDILADLPTREASRFRTQVSNLASEAKKERIGLSK 288

Query: 301 EVSKISDYGISV 313
           EVSKIS+YGISV
Sbjct: 324 EVSKISNYGISV 288

[Close]

BLAST of Clc06G03260 vs. ExPASy Swiss-Prot
Match: Q84K90 (RGS1-HXK1-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=RHIP1 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.0e-20
Identity = 78/306 (25.49%), Postives = 146/306 (47.71%), Query Frame = 0


Query: 7   SSPSQENQSFSSRLHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDQSLESAIQASKS 66
           S+P+ E ++ S  +  ++ G  +S+E   +   ++        QR + +S ++A+++++S
Sbjct: 13  SAPAIETETVSDAMEHTAIGVVESVEGAIEGAEKWVGD----LQRTVKESKDTAMRSARS 72

Query: 67  RLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAASHPLISCGVATGMG 126
               +R  S   F+   D    A ++   YEN  F K+ D ++ A  HP  + G+     
Sbjct: 73  ----LRENSTSQFRSIQDFIPHALTQYKTYENAFFSKVTDELIYAKEHPAAAIGIGVAAS 132

Query: 127 FLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRGSLCSSATWTQGHS 186
            ++ + PR FL+  T+  F +EE                                     
Sbjct: 133 LVLMRGPRRFLFRNTLGRFQSEE------------------------------------- 192

Query: 187 FTAYRTDSVQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTKLRQAGK 246
                     + F KA+  V+EL  S+D +K ES +L +RT  A++++ RG ++L  +G 
Sbjct: 193 ----------AQFLKAEKHVQELNMSVDLMKKESRKLLERTALAEKDMKRGLSELMNSGN 252

Query: 247 QIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKKERIGLSKEVSKIS 306
            I  + +S +K E +A  L D L  +P R+A +LR +V+++ S  +++RI L+K +  +S
Sbjct: 253 DIHRLAKSVHKAECEAADLMDGLRQIPGRDAIKLRAEVASMTSLLRQKRIALNKRIMGMS 263

Query: 307 DYGISV 313
           D G+SV
Sbjct: 313 DLGVSV 263

[Close]

BLAST of Clc06G03260 vs. ExPASy TrEMBL
Match: A0A1S3CAD0 (uncharacterized protein LOC103498769 OS=Cucumis melo OX=3656 GN=LOC103498769 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 9.3e-117
Identity = 246/312 (78.85%), Postives = 254/312 (81.41%), Query Frame = 0


Query: 1   MAMDAGSSPSQENQSFSSRLHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDQSLESA 60
           MAMDAGSS SQENQS  S  HESS  KPQSLEDLAKPWAEYAAQQALLYQRAID SLESA
Sbjct: 1   MAMDAGSSSSQENQSSPSYHHESSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60

Query: 61  IQASKSRLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAASHPLISCG 120
           I+ASKSRLSQIRS SYPHFQKAIDSFWEA+SELAAYENL+FGKIRDGILVAASHPLISCG
Sbjct: 61  IEASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCG 120

Query: 121 VATGMGFLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRGSLCSSAT 180
           VATGMGFLVFKKPR+FLYYKTVRLF+NEE                               
Sbjct: 121 VATGMGFLVFKKPRSFLYYKTVRLFMNEE------------------------------- 180

Query: 181 WTQGHSFTAYRTDSVQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK 240
                           SL SKADAKVKELRQSIDRIKVESERLEKRTLQA+EELIRGRTK
Sbjct: 181 ----------------SLLSKADAKVKELRQSIDRIKVESERLEKRTLQAEEELIRGRTK 240

Query: 241 LRQAGKQIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKKERIGLSK 300
           LRQAGKQIEGVIQSA+KIERKARGLKDILADLPTREASR RTQVSNLASEAKKERIGLSK
Sbjct: 241 LRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNLASEAKKERIGLSK 265

Query: 301 EVSKISDYGISV 313
           EVSKIS+YGISV
Sbjct: 301 EVSKISNYGISV 265

[Close]

BLAST of Clc06G03260 vs. ExPASy TrEMBL
Match: A0A5D3DNB0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003230 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 1.0e-115
Identity = 244/310 (78.71%), Postives = 252/310 (81.29%), Query Frame = 0


Query: 3   MDAGSSPSQENQSFSSRLHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDQSLESAIQ 62
           MDAGSS SQENQS  S  HESS  KPQSLEDLAKPWAEYAAQQALLYQRAID SLESAI+
Sbjct: 1   MDAGSSSSQENQSSPSYHHESSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESAIE 60

Query: 63  ASKSRLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAASHPLISCGVA 122
           ASKSRLSQIRS SYPHFQKAIDSFWEA+SELAAYENL+FGKIRDGILVAASHPLISCGVA
Sbjct: 61  ASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCGVA 120

Query: 123 TGMGFLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRGSLCSSATWT 182
           TGMGFLVFKKPR+FLYYKTVRLF+NEE                                 
Sbjct: 121 TGMGFLVFKKPRSFLYYKTVRLFMNEE--------------------------------- 180

Query: 183 QGHSFTAYRTDSVQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTKLR 242
                         SL SKADAKVKELRQSIDRIKVESERLEKRTLQA+EELIRGRTKLR
Sbjct: 181 --------------SLLSKADAKVKELRQSIDRIKVESERLEKRTLQAEEELIRGRTKLR 240

Query: 243 QAGKQIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKKERIGLSKEV 302
           QAGKQIEGVIQSA+KIERKARGLKDILADLPTREASR RTQVSNLASEAKKERIGLSKEV
Sbjct: 241 QAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNLASEAKKERIGLSKEV 263

Query: 303 SKISDYGISV 313
           SKIS+YGISV
Sbjct: 301 SKISNYGISV 263

[Close]

BLAST of Clc06G03260 vs. ExPASy TrEMBL
Match: A0A6J1L5I2 (uncharacterized protein LOC111499304 OS=Cucurbita maxima OX=3661 GN=LOC111499304 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 5.5e-109
Identity = 232/312 (74.36%), Postives = 246/312 (78.85%), Query Frame = 0


Query: 1   MAMDAGSSPSQENQSFSSRLHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDQSLESA 60
           MAMDAGSS S EN S  S  HESSPGKPQ+LEDLAK W  YAAQQA+LYQ AI+ SLESA
Sbjct: 1   MAMDAGSSSSLENPSSLSNHHESSPGKPQALEDLAKSWVGYAAQQAMLYQLAINHSLESA 60

Query: 61  IQASKSRLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAASHPLISCG 120
           ++ASKSRLSQIRS SYPHFQKAIDSF + +SE+A +ENLLFGK+RDGILVAASHPLISCG
Sbjct: 61  VEASKSRLSQIRSTSYPHFQKAIDSFQDVKSEVADFENLLFGKVRDGILVAASHPLISCG 120

Query: 121 VATGMGFLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRGSLCSSAT 180
           VATGMG LVFKKPRNFLYYKTVRLFVNEE                               
Sbjct: 121 VATGMGLLVFKKPRNFLYYKTVRLFVNEE------------------------------- 180

Query: 181 WTQGHSFTAYRTDSVQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK 240
                           +L SKADA+VKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK
Sbjct: 181 ----------------ALLSKADARVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK 240

Query: 241 LRQAGKQIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKKERIGLSK 300
           LRQAGKQIEGVIQSA+KIERKARGLKDILADLPTREASR RTQVSNLASEAKKERIGLSK
Sbjct: 241 LRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNLASEAKKERIGLSK 265

Query: 301 EVSKISDYGISV 313
           EVSKIS+YGISV
Sbjct: 301 EVSKISNYGISV 265

[Close]

BLAST of Clc06G03260 vs. ExPASy TrEMBL
Match: A0A6J1H5U3 (uncharacterized protein LOC111460300 OS=Cucurbita moschata OX=3662 GN=LOC111460300 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.6e-108
Identity = 232/312 (74.36%), Postives = 246/312 (78.85%), Query Frame = 0


Query: 1   MAMDAGSSPSQENQSFSSRLHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDQSLESA 60
           MAMDAGSS S ENQS  S  HESS GKPQ+LEDLAK WA YAAQQA+LYQ AI+ SLESA
Sbjct: 1   MAMDAGSSSSLENQSSLSNHHESSLGKPQALEDLAKSWAGYAAQQAMLYQLAINHSLESA 60

Query: 61  IQASKSRLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAASHPLISCG 120
           ++ASKSRLSQIRS SYPHFQKAIDSF + +SE+A +ENL FGK+RDGILVAASHPLISCG
Sbjct: 61  VEASKSRLSQIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAASHPLISCG 120

Query: 121 VATGMGFLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRGSLCSSAT 180
           VATGMG LVFKKPRNFLYYKTVRLFVNEE                               
Sbjct: 121 VATGMGLLVFKKPRNFLYYKTVRLFVNEE------------------------------- 180

Query: 181 WTQGHSFTAYRTDSVQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK 240
                           +L SKADA+VKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK
Sbjct: 181 ----------------ALLSKADARVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK 240

Query: 241 LRQAGKQIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKKERIGLSK 300
           LRQAGKQIEGVIQSA+KIERKARGLKDILADLPTREASR RTQVSNLASEAKKERIGLSK
Sbjct: 241 LRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNLASEAKKERIGLSK 265

Query: 301 EVSKISDYGISV 313
           EVSKIS+YGISV
Sbjct: 301 EVSKISNYGISV 265

[Close]

BLAST of Clc06G03260 vs. ExPASy TrEMBL
Match: A0A6J1DXH1 (uncharacterized protein LOC111024998 OS=Momordica charantia OX=3673 GN=LOC111024998 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.8e-104
Identity = 225/312 (72.12%), Postives = 242/312 (77.56%), Query Frame = 0


Query: 1   MAMDAGSSPSQENQSFSSRLHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDQSLESA 60
           MA D+GSS S+E  S SS L+ESS GKPQSL  LAKPWA+YAA QALLYQR ID SLESA
Sbjct: 1   MATDSGSSSSEEELSSSSPLNESSSGKPQSLASLAKPWADYAAHQALLYQRTIDDSLESA 60

Query: 61  IQASKSRLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAASHPLISCG 120
           IQASKSRLSQIRS S+PH QK IDSF +A+SELAAYENLLFGKIRDGILVAASHPLISCG
Sbjct: 61  IQASKSRLSQIRSTSHPHLQKTIDSFQDAKSELAAYENLLFGKIRDGILVAASHPLISCG 120

Query: 121 VATGMGFLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRGSLCSSAT 180
           VATG+GFLV KKPRNFLY+KT+RLF+NEE                               
Sbjct: 121 VATGLGFLVLKKPRNFLYHKTIRLFMNEE------------------------------- 180

Query: 181 WTQGHSFTAYRTDSVQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK 240
                           SL SKADA+VKELRQSIDRIKVESERLEKRTLQA+ EL+RGRTK
Sbjct: 181 ----------------SLLSKADAQVKELRQSIDRIKVESERLEKRTLQAEGELLRGRTK 240

Query: 241 LRQAGKQIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKKERIGLSK 300
           LRQAGKQIEGVIQSA+ IERKARGLKDILADLPTREAS+ RTQVSNLASEAKKERI L K
Sbjct: 241 LRQAGKQIEGVIQSAHTIERKARGLKDILADLPTREASQFRTQVSNLASEAKKERIALGK 265

Query: 301 EVSKISDYGISV 313
           EVSKIS+YGISV
Sbjct: 301 EVSKISNYGISV 265

[Close]

BLAST of Clc06G03260 vs. TAIR 10
Match: AT2G45060.1 (Uncharacterised conserved protein UCP022280 )

HSP 1 Score: 241.1 bits (614), Expect = 1.2e-63
Identity = 150/319 (47.02%), Postives = 193/319 (60.50%), Query Frame = 0


Query: 1   MAMDAGSSPSQENQSFSSRLHESSPGKPQSLEDL-------AKPWAEYAAQQALLYQRAI 60
           MA    SS S+ + + S  + +SSP  P   + +       A  W + A +QAL+YQ+ I
Sbjct: 1   MAALGESSSSEMDNAKSPEIQQSSPVHPPEYQKIATTTVENAASWIDDALRQALVYQKTI 60

Query: 61  DQSLESAIQASKSRLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAAS 120
            ++++S I ASK+RLSQIR  S  H  + IDS  +  SE   YE ++FGKI+DG+ VAAS
Sbjct: 61  TETVDSTIDASKARLSQIRDTSVAHTSQTIDSLRDIASEYNVYEQMVFGKIKDGVNVAAS 120

Query: 121 HPLISCGVATGMGFLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRG 180
           HPLIS  +A G+G    KK R F+YY TVR+FV+EE                        
Sbjct: 121 HPLISGTLAFGVGIFALKKTRRFVYYNTVRMFVSEE------------------------ 180

Query: 181 SLCSSATWTQGHSFTAYRTDSVQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEE 240
                                  +L S+AD KVKELRQS+DR+K ESE+LE+    A+EE
Sbjct: 181 -----------------------ALLSRADLKVKELRQSMDRLKAESEKLERVATVAEEE 240

Query: 241 LIRGRTKLRQAGKQIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKK 300
            IRGR KLRQAGKQI G I SAYKIE++A GLKD+L +LPTREASR RTQ+S  ASE K+
Sbjct: 241 FIRGRMKLRQAGKQIRGAISSAYKIEKQAAGLKDVLKELPTREASRFRTQISKRASEVKQ 272

Query: 301 ERIGLSKEVSKISDYGISV 313
           ER  L+KEV+KIS+YGISV
Sbjct: 301 ERNALTKEVNKISNYGISV 272

[Close]

BLAST of Clc06G03260 vs. TAIR 10
Match: AT4G26410.1 (Uncharacterised conserved protein UCP022280 )

HSP 1 Score: 101.3 bits (251), Expect = 1.5e-21
Identity = 78/306 (25.49%), Postives = 146/306 (47.71%), Query Frame = 0


Query: 7   SSPSQENQSFSSRLHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDQSLESAIQASKS 66
           S+P+ E ++ S  +  ++ G  +S+E   +   ++        QR + +S ++A+++++S
Sbjct: 13  SAPAIETETVSDAMEHTAIGVVESVEGAIEGAEKWVGD----LQRTVKESKDTAMRSARS 72

Query: 67  RLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAASHPLISCGVATGMG 126
               +R  S   F+   D    A ++   YEN  F K+ D ++ A  HP  + G+     
Sbjct: 73  ----LRENSTSQFRSIQDFIPHALTQYKTYENAFFSKVTDELIYAKEHPAAAIGIGVAAS 132

Query: 127 FLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRGSLCSSATWTQGHS 186
            ++ + PR FL+  T+  F +EE                                     
Sbjct: 133 LVLMRGPRRFLFRNTLGRFQSEE------------------------------------- 192

Query: 187 FTAYRTDSVQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTKLRQAGK 246
                     + F KA+  V+EL  S+D +K ES +L +RT  A++++ RG ++L  +G 
Sbjct: 193 ----------AQFLKAEKHVQELNMSVDLMKKESRKLLERTALAEKDMKRGLSELMNSGN 252

Query: 247 QIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKKERIGLSKEVSKIS 306
            I  + +S +K E +A  L D L  +P R+A +LR +V+++ S  +++RI L+K +  +S
Sbjct: 253 DIHRLAKSVHKAECEAADLMDGLRQIPGRDAIKLRAEVASMTSLLRQKRIALNKRIMGMS 263

Query: 307 DYGISV 313
           D G+SV
Sbjct: 313 DLGVSV 263

The following BLAST results are available for this feature:

BLAST of Clc06G03260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459726.1	1.9e-116	78.85	PREDICTED: uncharacterized protein LOC103498769 [Cucumis melo]	[more]
TYK24760.1	2.1e-115	78.71	uncharacterized protein E5676_scaffold266G003230 [Cucumis melo var. makuwa]	[more]
XP_011656867.1	2.8e-115	77.56	RGS1-HXK1-interacting protein 1 isoform X1 [Cucumis sativus] >KGN46566.2 hypothe...	[more]
XP_011656868.1	5.8e-113	77.24	RGS1-HXK1-interacting protein 1 isoform X2 [Cucumis sativus]	[more]
XP_038875078.1	1.7e-112	76.92	LOW QUALITY PROTEIN: RGS1-HXK1-interacting protein 1 [Benincasa hispida]	[more]

BLAST of Clc06G03260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84K90	2.0e-20	25.49	RGS1-HXK1-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=RHIP1 PE=1 SV...	[more]

BLAST of Clc06G03260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CAD0	9.3e-117	78.85	uncharacterized protein LOC103498769 OS=Cucumis melo OX=3656 GN=LOC103498769 PE=...	[more]
A0A5D3DNB0	1.0e-115	78.71	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1L5I2	5.5e-109	74.36	uncharacterized protein LOC111499304 OS=Cucurbita maxima OX=3661 GN=LOC111499304...	[more]
A0A6J1H5U3	1.6e-108	74.36	uncharacterized protein LOC111460300 OS=Cucurbita moschata OX=3662 GN=LOC1114603...	[more]
A0A6J1DXH1	1.8e-104	72.12	uncharacterized protein LOC111024998 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]

BLAST of Clc06G03260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45060.1	1.2e-63	47.02	Uncharacterised conserved protein UCP022280	[more]
AT4G26410.1	1.5e-21	25.49	Uncharacterised conserved protein UCP022280	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 199..233
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR34554	RGS1-HXK1-INTERACTING PROTEIN 1	coord: 195..312
None	No IPR available	PANTHER	PTHR34554:SF1	ALANINE-TRNA LIGASE	coord: 195..312 coord: 5..149
None	No IPR available	PANTHER	PTHR34554	RGS1-HXK1-INTERACTING PROTEIN 1	coord: 5..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G03260.2	Clc06G03260.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane