Clc06G03140 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCATCTTGAGCAAATCCAACAGTATGGCCACTCCCTCTTTCCATGAGTTGAAGAAGCAAGCTTCTTTCTTTTTCAAGGAGAAAATCAAGACTGCCAGATTAGCCCTCACAGATGTCACCTTTGCTGAATTGTAAGTTCATTAATTTCCTGTTCTTACTCAAGTTCCTTATATATATATACATGGATTGGTTGTTGCTGATCCTCCAAATTTCTTTTGTTTTCTTTGCTTTTTAGATTGACTGAAGAAGCTATCAATGGAAACCCTGATACAAGATCCTTGAGTTCAATATCAAAGGCAGCTTTTGAGGTTGATGACTATTGGAGAATTGTAGCAGTTCTCCATAAAAGGTTTTGACTCTCTGCTTCTTTGATCAATGTTTTAAAGTTTTCCAAGTTTCTATTTCAATATAAATTAGACCTTCTGATTCTCATGGACAAAACCCATCATTGATAAGTTACAAGATTCAAAGTGTATAAAGTCTATACTATTTTTTAGGAAATGTTGGACAACTATTTTTTTTTTGGGTTTCATATCTCTTAAACAAAAACAAGTTTATTAAAACTATTTTGTTTAGTTTTCAAGGCTTGGTTTTTGAAAACATAGAAATAGGCTGATCATTGTCTGATTTGACCGAAGGACGAATACACAAGCAACGTTCATGCTTGTTTAAGTAATAGCTATGGGATCATGTAATAAAGAAACTTATAGGTGGAAGTAGTGTTTATGAGCATAATTTTAAAAAACGAATAACCACAAACAAAATAGTTACCAAATAAGACCTTAGTTTTGTCTTTGTTCTTTCTTTGTTCCTTAAAAATGTCCACCTTTAATTTTGCTGATGGGATCCATGATTGATAAAAGCAAACAAACTTGCGAGGCAGATTGCTGAAATTTGAAAAGAAGAATTGGAGACTTTCCTACAACTCTCTCATCATTCTTGAACATCTCTTGACTCATGGACCAGAGAGTGTAGCAGAGGAGTTTCAGACTGACAAAGATGTTATTACCCAAATGGGAACCTTCCAATATGTTGATGAAAAGGGGTAATGCTTGTTTTCATGTTTTCAAACATGTGTTTTGGTAGTCCATCGAAAGCCATCTTTCTCTAATTTTATTGTCAAAACGAAAGATGTATTTGATGATGTTCATAATTGGATGCTGATTTGGTTATAGGTTCAATTGGGGCATTTCAGTGAGAAAGAGATCAGAGAGGATATTGAAGCTGCTTGACAAAGGGTCTGTCCTCAAAGAAGAGAGGGAAAAGGCTAGAAAGTTGACAAGAGAAATTCTAGGATTTGGAAGCTTCTCCTTGAGATCAAAGTGTTCAGAAATTGTGGAAGATTCTTCTTCTTCACCCATTGGAAGATATGGAAAGTGCAATTCCAACTTCAACACTCTTGAGAATCTTGACCAAGAAGAACATTTGGTTTTGTTAGAAAAAAAGGATGGAATTTCAGCTAATGATTATCATCCTTTCATCAACGACGAATCAAAATCGAACCTCTCATTGCTTTTGGGATAATGACAGAGGAATTTGGAATTGTTTTTGAGTTCCATTCATGATTCAATATCATAGTTACATGTACTTGATCAGATTGACATAAGAAATAAACATGCTACCAATGAAAGGAACCGAGATTTTTGTTTTGAAGAATTTGAAAAATAGTAGTGGTTGGTTTTGTGTGCCTTGCAGTTTTGAAAAAGAAAGCTAAAAGTTTAGCATCTATCTTTATCAAGATTAGAACTTCATATTTTTATTGTTGGAACTGTTCGCTTTTGACAATTGAAAGGTGAAAAAATTTATGTATACAACATATTTGATACAATAGGTTGGAACGTCTTTCTAATACATAAAAGTAAAAGTTGGCATAAGAATTAAGGTGTCAAATTAGTATTAGTGCTGGTTCATCCAGAGGAGTAGATGTAAAAACAGATTCATGGGTTTGATCGAATTTTGAGTGTTTAATAGTTAATCTCCATAATATAATTTATATGAGAAACTTTGACTACCACTGACGGCAAACTCCAGAGATCGCCGTCGGTCAACTTTGACCACTACTTCTCGCGACTGTCACTGGCCAATTCTCCGGCAACCAACACCAACCACTTCTCCGGCCATCATCGTCGGCCAACCTCTGGCTACCACCTCTACGATTGTCGCCGACAAATTCTTTTGTAGCAATTTGACATTAGTAAAAATACTTTCAATATATAACAAACCAAACAAATTTGTATATGAAATATTTTGAGAAAAAAATATTTTTATTTTAAAGAGTTTTTATGAAAAGCATTTAAATGAAAATGAATTTTTATTTCTAAGTCATTCGCCTTTTAAGGTCTAGATTGACTTTATGAGTGTTTAATCTCACCTTTTTTCTACTTAAAAATACTTTGTAAACACTTATTTATCTAGCACACTAATGCAAGATATATAATAGTGTGTCACCAAGTTATAATCATTTGGTTTTTGGTTTGATTTTTGGTTTTTTAAAAATTAAGTCTGTTTCCTTTCAATTTCTTACAATGATCTCCATATTTTTTTATAAGAGTTAGAGTTTTTAGCCAAATTTCAAAAACAAAAATAAATTTTTAAAACTATTTTTTTAGTTTTCAAAACTTTGTTTGGCTTTTGAAGATAAAAGATAATTTATAGACTTAATTTTCAAAAATTAAAAGACAAAAACGAAATGACTACTAAACATACCTAAATTTGTTTTCTCTAGGAGACAACTATGTAGAATACATTCTAGATACTTCTTGGTGATATATATATCTTGCATTAGTGTGTGGATAAATAAGTGTTTCTTTGGATTGAATCCAAACACCCTAAATCTTGTGAGCAGATGAATTTGAAGTAGTGATGTGTTTTTCTAAAATCACTATTCAAGCAGTGATACTTTTTTTTAATAAGGCGAACATAAACTAATAGTACAAGAGGTTACAACTTAACTTCATCGATCAAGAATGATCGAGAGAATACTATCTAGAAAGAAATCTTTCTAGATTAAAAAATGACCCCGAGGGAATGTCAAAGTTGCAAAAATATGAGCAACTTTGTTCTCCTCTCAAACAACATGACAAAAATATTGTTGGCTTTTTTGTCGCCTTTCTCTCGCTCACTCTCGGTCTCCTCTCCCTCGCTCTCTAATTGGCAACACCCATCTCGATCTCCTTTCGTCTATGCAATGATGCTCACCAATCTCATCACGCTCTCTCGCTTTTCGGCTCTCCATTTTTCTCTCTCGCTCTCTCATTTTCCAACAACCCACACATCTGACATTCTAATTTCACTCAATCCAATGACCCCACTACAATGTTTCGATGGCCAATGATGCAAGCCAGCAACTAAAACAAAATACTGAAAGGGAAATCGAGAAGAGAAGACGAAAGAAATTAAAGTTAATTTTGTAAATTTTGCTGATAATGGTGTAAGGAGGGCAAAATTCATAAAGTTTTAAAAGGGTGAAATTGTCAAAAATAGCCCATTCAAGATTCTATCTTTCAAATCTAGTACCCTTTAAGAAAATTAGATAAAATAGTTTTTATTGCTCTATCTCAGCCGAGATCAACTAGTTAATTTTTTCATCTTATCGATTGTTTTGGGCTTTCTCGGTCAAATCTCCAGTAATATTAACACTAAGATTCCACTAATTTTTTCCAATATTATCTAATATTTTCAAATCTTATATCTTTTCAAAATTTCTCCAAATTTGATGTATTTGAGCTTTTTCGGTGAAATCTTGTGCAAATTAACACCTAGATTCTTTATATTTCCCAAAATTTTACTTAGTTTTTCACAAAATTTGATCTTTGGGCGAAAGATTTGAAAAATTATGTAACATTTGATATAAGATTTGGAAAGATTAATAGAATTTCAATGTTAACGTTGCCTATGATTTAAAAAGTCCAAAACAATCAATAAGATGGAAAAAGTTAAATTTTTATTTAAATCAGCTGTTGATCTAGACCGAGATAGATAATGACAATTTTTCGGAAAATGTGCTAGTTTTAAAAGATGGAAACTCAAGGGTTATTATTTATAATTTCCCTTTAAATTGTGGGGGCAAAAATCATCTTTAGCTCTAGATTGGGCTTTTATACAATTATCTCTGAAATTTCCTATTTTTTTCCTCTCCAGTCTCTCTCCCCCGTTTCTCCTCCTTCTTCGGCAGCTTCTTCTTGCCGTCTACTTGTGCTGCTTGAAATTCATCTCTGGATTTTTTCCATTTCCTTGTCCTGAACATCTCTCTCTGCTCTCTCTAGAAGAGGTATATACTTCATCTCTCTCTGGATTTTTCATTCTTATTCCCAATTCGAAGTTTGTAAGTCGAACCGTTGTCATTATGATAAACCTTTTTGGTTTGTGTTGTTTTTTACAGTTAATTGAACAAATAAAGATTTGCTTTTTTTCTTTGGAAAGGTGTATTAGGATCTGCGTGTTTTTTGTTTCCATTCGGATCCATGATGGGTTTGGTTTTTTTTTGGGGGGGGGGGGGGGTTTGATTTCTTTCCTTCAAAGCATTTCTTCTTGTGATTTCTTGCCTGCCAACCGTTTTTTCTCTTTGTGGAGGAAATGGTGGAAAGTTAAAGTTTTATTGATTATGAGTTTTTTTTATTAATAGGTTTTAGTTTCTTCAGCAATGAAGCTTAGTAATAATTAATAATGCATTTCAGTTTTGTTTTTCTAAGAGAAATGTTAGATTAGGAATTTGTCTTTTCTCTTTTACTACTTCCTCTGCTACTATAACCGCCACTGAATGTCACGTGAAATTACAGAGTAATCTTTACATGTATACTATTAATCTTAAATCCCCAATTAACTCAAAAGCTTAAGCTGATGGGTGAAAGATAAATTTAATATTATATCTATCATCTTATACTCCCCTTCACTTGCGGGCTTCAAATATGTAGAAAACCCAACAAGTGAAAATCAATATTAATTGGAGAGGAAATAACATTGCAGTAGTTTGAATGGAGGCCTCTTGGACCACCTGCTCTGATACCATCTTAAATCACCAAAGTTTTGTAAGTTTACTTGAAAATTAGAGAGTCAAATTATATATTTATAATTGTTGGTTGTGTTTGTGGTTATGGTTGGAATAGTTGAATGAAAAATTGAAGGGGAAATCTTAAGGAAGGAGAATGGGGGAGCCTAGAAAGCACAAACACTTTAGTTTAGCCAGAGTGTCCATGTCCAACATGTGACAAATACTTGGACACTCCATCACTTGTTGGACACATATCGGACACTTGTTGGTGAAACAGATGTGTTAGACCACTAGTTGTACAAAGTCAAAGTAGGTCCATTGGTGTGTTAGACACATGTTAGATATTACATTTATCTTCTAGCATTGTAATATTTTTAATGTAATTTTAATATTTGTTGCGCAGGTTTCCACCTCTTTAGATGATGCATTGAATTTTTCTGTCTTTAATATTAGTATTTGAGAAGACATTAGGGCTAATGTCAACCATACTTTTGTGAACTATAATGGCATTGCTCTGAATCTTTAATTTTGCAGATACAATAGCTTGCAGAAAGTTTATATCTTGCTAG ATGTCCATCTTGAGCAAATCCAACAGTATGGCCACTCCCTCTTTCCATGAGTTGAAGAAGCAAGCTTCTTTCTTTTTCAAGGAGAAAATCAAGACTGCCAGATTAGCCCTCACAGATGTCACCTTTGCTGAATTATTGACTGAAGAAGCTATCAATGGAAACCCTGATACAAGATCCTTGAGTTCAATATCAAAGGCAGCTTTTGAGGTTGATGACTATTGGAGAATTGTAGCAGTTCTCCATAAAAGATTGCTGAAATTTGAAAAGAAGAATTGGAGACTTTCCTACAACTCTCTCATCATTCTTGAACATCTCTTGACTCATGGACCAGAGAGTGTAGCAGAGGAGTTTCAGACTGACAAAGATGTTATTACCCAAATGGGAACCTTCCAATATGTTGATGAAAAGGGGTTCAATTGGGGCATTTCAGTGAGAAAGAGATCAGAGAGGATATTGAAGCTGCTTGACAAAGGGTCTGTCCTCAAAGAAGAGAGGGAAAAGGCTAGAAAGTTGACAAGAGAAATTCTAGGATTTGGAAGCTTCTCCTTGAGATCAAAGTTTTTGAAAAAGAAAGCTAAAAGTTTAGCATCTATCTTTATCAAGATTAGAACTTCATATTTTTATTGTTGGAACTGTTCGCTTTTGACAATTGAAAGTCTCTCTCCCCCGTTTCTCCTCCTTCTTCGGCAGCTTCTTCTTGCCGTCTACTTGTGCTGCTTGAAATTCATCTCTGGATTTTTTCCATTTCCTTGTCCTGAACATCTCTCTCTGCTCTCTCTAGAAGAGGTATATACTTCATCTCTCTCTGGATTTTTCATTCTTATTCCCAATTCGAAGTTTGTTTTAGTTTCTTCAGCAATGAAGCTTAATACAATAGCTTGCAGAAAGTTTATATCTTGCTAG ATGTCCATCTTGAGCAAATCCAACAGTATGGCCACTCCCTCTTTCCATGAGTTGAAGAAGCAAGCTTCTTTCTTTTTCAAGGAGAAAATCAAGACTGCCAGATTAGCCCTCACAGATGTCACCTTTGCTGAATTATTGACTGAAGAAGCTATCAATGGAAACCCTGATACAAGATCCTTGAGTTCAATATCAAAGGCAGCTTTTGAGGTTGATGACTATTGGAGAATTGTAGCAGTTCTCCATAAAAGATTGCTGAAATTTGAAAAGAAGAATTGGAGACTTTCCTACAACTCTCTCATCATTCTTGAACATCTCTTGACTCATGGACCAGAGAGTGTAGCAGAGGAGTTTCAGACTGACAAAGATGTTATTACCCAAATGGGAACCTTCCAATATGTTGATGAAAAGGGGTTCAATTGGGGCATTTCAGTGAGAAAGAGATCAGAGAGGATATTGAAGCTGCTTGACAAAGGGTCTGTCCTCAAAGAAGAGAGGGAAAAGGCTAGAAAGTTGACAAGAGAAATTCTAGGATTTGGAAGCTTCTCCTTGAGATCAAAGTTTTTGAAAAAGAAAGCTAAAAGTTTAGCATCTATCTTTATCAAGATTAGAACTTCATATTTTTATTGTTGGAACTGTTCGCTTTTGACAATTGAAAGTCTCTCTCCCCCGTTTCTCCTCCTTCTTCGGCAGCTTCTTCTTGCCGTCTACTTGTGCTGCTTGAAATTCATCTCTGGATTTTTTCCATTTCCTTGTCCTGAACATCTCTCTCTGCTCTCTCTAGAAGAGGTATATACTTCATCTCTCTCTGGATTTTTCATTCTTATTCCCAATTCGAAGTTTGTTTTAGTTTCTTCAGCAATGAAGCTTAATACAATAGCTTGCAGAAAGTTTATATCTTGCTAG MSILSKSNSMATPSFHELKKQASFFFKEKIKTARLALTDVTFAELLTEEAINGNPDTRSLSSISKAAFEVDDYWRIVAVLHKRLLKFEKKNWRLSYNSLIILEHLLTHGPESVAEEFQTDKDVITQMGTFQYVDEKGFNWGISVRKRSERILKLLDKGSVLKEEREKARKLTREILGFGSFSLRSKFLKKKAKSLASIFIKIRTSYFYCWNCSLLTIESLSPPFLLLLRQLLLAVYLCCLKFISGFFPFPCPEHLSLLSLEEVYTSSLSGFFILIPNSKFVLVSSAMKLNTIACRKFISC Homology
BLAST of Clc06G03140 vs. NCBI nr
Match: XP_038875427.1 (clathrin interactor 1-like [Benincasa hispida]) HSP 1 Score: 339.3 bits (869), Expect = 3.3e-89 Identity = 173/186 (93.01%), Postives = 181/186 (97.31%), Query Frame = 0
BLAST of Clc06G03140 vs. NCBI nr
Match: XP_008459736.1 (PREDICTED: ENTH domain-containing protein C794.11c-like [Cucumis melo]) HSP 1 Score: 336.7 bits (862), Expect = 2.1e-88 Identity = 174/186 (93.55%), Postives = 179/186 (96.24%), Query Frame = 0
BLAST of Clc06G03140 vs. NCBI nr
Match: XP_004140497.1 (clathrin interactor 1 [Cucumis sativus] >KAE8646791.1 hypothetical protein Csa_005646 [Cucumis sativus]) HSP 1 Score: 336.7 bits (862), Expect = 2.1e-88 Identity = 173/185 (93.51%), Postives = 178/185 (96.22%), Query Frame = 0
BLAST of Clc06G03140 vs. NCBI nr
Match: XP_022151559.1 (clathrin interactor EPSIN 1 [Momordica charantia]) HSP 1 Score: 333.2 bits (853), Expect = 2.3e-87 Identity = 170/186 (91.40%), Postives = 179/186 (96.24%), Query Frame = 0
BLAST of Clc06G03140 vs. NCBI nr
Match: KAA0039750.1 (ENTH domain-containing protein-like protein [Cucumis melo var. makuwa] >TYK24747.1 ENTH domain-containing protein-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 325.5 bits (833), Expect = 4.9e-85 Identity = 167/177 (94.35%), Postives = 170/177 (96.05%), Query Frame = 0
BLAST of Clc06G03140 vs. ExPASy Swiss-Prot
Match: A7Z035 (Clathrin interactor 1 OS=Bos taurus OX=9913 GN=CLINT1 PE=2 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 8.9e-13 Identity = 45/160 (28.12%), Postives = 85/160 (53.12%), Query Frame = 0
BLAST of Clc06G03140 vs. ExPASy Swiss-Prot
Match: Q14677 (Clathrin interactor 1 OS=Homo sapiens OX=9606 GN=CLINT1 PE=1 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 8.9e-13 Identity = 45/160 (28.12%), Postives = 85/160 (53.12%), Query Frame = 0
BLAST of Clc06G03140 vs. ExPASy Swiss-Prot
Match: Q99KN9 (Clathrin interactor 1 OS=Mus musculus OX=10090 GN=Clint1 PE=1 SV=2) HSP 1 Score: 75.1 bits (183), Expect = 1.5e-12 Identity = 43/143 (30.07%), Postives = 78/143 (54.55%), Query Frame = 0
BLAST of Clc06G03140 vs. ExPASy Swiss-Prot
Match: P78813 (ENTH domain-containing protein C794.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC794.11c PE=1 SV=2) HSP 1 Score: 71.6 bits (174), Expect = 1.7e-11 Identity = 39/157 (24.84%), Postives = 82/157 (52.23%), Query Frame = 0
BLAST of Clc06G03140 vs. ExPASy Swiss-Prot
Match: Q93YP4 (Clathrin interactor EPSIN 3 OS=Arabidopsis thaliana OX=3702 GN=EPSIN3 PE=2 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 2.8e-11 Identity = 41/114 (35.96%), Postives = 64/114 (56.14%), Query Frame = 0
BLAST of Clc06G03140 vs. ExPASy TrEMBL
Match: A0A1S3CAD9 (ENTH domain-containing protein C794.11c-like OS=Cucumis melo OX=3656 GN=LOC103498779 PE=4 SV=1) HSP 1 Score: 336.7 bits (862), Expect = 1.0e-88 Identity = 174/186 (93.55%), Postives = 179/186 (96.24%), Query Frame = 0
BLAST of Clc06G03140 vs. ExPASy TrEMBL
Match: A0A6J1DDE5 (clathrin interactor EPSIN 1 OS=Momordica charantia OX=3673 GN=LOC111019473 PE=4 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 1.1e-87 Identity = 170/186 (91.40%), Postives = 179/186 (96.24%), Query Frame = 0
BLAST of Clc06G03140 vs. ExPASy TrEMBL
Match: A0A5A7T920 (ENTH domain-containing protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003100 PE=4 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 2.4e-85 Identity = 167/177 (94.35%), Postives = 170/177 (96.05%), Query Frame = 0
BLAST of Clc06G03140 vs. ExPASy TrEMBL
Match: A0A0A0KDV3 (ENTH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G108500 PE=4 SV=1) HSP 1 Score: 325.1 bits (832), Expect = 3.1e-85 Identity = 166/177 (93.79%), Postives = 170/177 (96.05%), Query Frame = 0
BLAST of Clc06G03140 vs. ExPASy TrEMBL
Match: A0A6J1GBK0 (clathrin interactor EPSIN 1 OS=Cucurbita moschata OX=3662 GN=LOC111452671 PE=4 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 1.1e-82 Identity = 162/186 (87.10%), Postives = 174/186 (93.55%), Query Frame = 0
BLAST of Clc06G03140 vs. TAIR 10
Match: AT3G46540.1 (ENTH/VHS family protein ) HSP 1 Score: 252.3 bits (643), Expect = 4.9e-67 Identity = 128/191 (67.02%), Postives = 164/191 (85.86%), Query Frame = 0
BLAST of Clc06G03140 vs. TAIR 10
Match: AT1G08670.1 (ENTH/VHS family protein ) HSP 1 Score: 161.0 bits (406), Expect = 1.5e-39 Identity = 87/180 (48.33%), Postives = 125/180 (69.44%), Query Frame = 0
BLAST of Clc06G03140 vs. TAIR 10
Match: AT3G23350.1 (ENTH/VHS family protein ) HSP 1 Score: 155.2 bits (391), Expect = 8.2e-38 Identity = 88/201 (43.78%), Postives = 127/201 (63.18%), Query Frame = 0
BLAST of Clc06G03140 vs. TAIR 10
Match: AT3G59290.1 (ENTH/VHS family protein ) HSP 1 Score: 70.9 bits (172), Expect = 2.0e-12 Identity = 41/114 (35.96%), Postives = 64/114 (56.14%), Query Frame = 0
BLAST of Clc06G03140 vs. TAIR 10
Match: AT2G43160.3 (ENTH/VHS family protein ) HSP 1 Score: 68.9 bits (167), Expect = 7.7e-12 Identity = 38/114 (33.33%), Postives = 66/114 (57.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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