Clc06G02740 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G02740
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	ethylene-responsive transcription factor ERF039-like
Location	ClcChr06: 2687558 .. 2688295 (+)
RNA-Seq Expression	Clc06G02740
Synteny	Clc06G02740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAGAACTAACACACACTGTCTTCTCTTCCTAAACAACAAACAAAAATCCCACCACCAAACCATTCCATATATCTTTAAAAATGACCACAAACTCCTATCATTCCACCACCAGTTCCTCCGCCGTAACCAGCCGGAAAAGACAGAGGAGCACAACCACCACCGAAAGCGAATCGGAAGAATCAACCCCAAAATTCAGAGGAGTAAGGCTAAGAACATGGGGAAAATGGGTATCTGAAATAAGAGAGCCAAGGAAAAAATCAAGAATTTGGCTCGGCACATATCCAACGGCGGAGATGGCGGCGCGTGCACATGACGTGGCTGCACTTGCCATCAAAGGCCACCGTGCTTTCCTCAATTTCCCTCAACTCAAACACCATCTCCCTCGCCCTGCCTCTCTCTCCGCCAAAGACATTCAAGCCGCCGCCGCAGAAGCCGCCGCCATCAAACAAGAACCGGAAACGACGTCGTGTGAGGACGAAGATACTTGGTTTGATTTGCCGGATCTAATTACCAATGGATTTTTACTGGGTTTTGATCATTATTCATCATCGCCATCATCGTCGTCGTCTTCTTCGCCATGGCAATTTCTTGCAGATGATCATGACGACCACCATCTTCAATGGCACTCTGATTTTTCTCATATTATTTTTCCAGCTTGAGTTTTTTTTTTTCTTTTTTTTTCTTTTTTTAAGTTAAATTAAATTCTGCTTTTTGTAATATTCTCTCTTGCCAAGAGG

mRNA sequence

CAAGAACTAACACACACTGTCTTCTCTTCCTAAACAACAAACAAAAATCCCACCACCAAACCATTCCATATATCTTTAAAAATGACCACAAACTCCTATCATTCCACCACCAGTTCCTCCGCCGTAACCAGCCGGAAAAGACAGAGGAGCACAACCACCACCGAAAGCGAATCGGAAGAATCAACCCCAAAATTCAGAGGAGTAAGGCTAAGAACATGGGGAAAATGGGTATCTGAAATAAGAGAGCCAAGGAAAAAATCAAGAATTTGGCTCGGCACATATCCAACGGCGGAGATGGCGGCGCGTGCACATGACGTGGCTGCACTTGCCATCAAAGGCCACCGTGCTTTCCTCAATTTCCCTCAACTCAAACACCATCTCCCTCGCCCTGCCTCTCTCTCCGCCAAAGACATTCAAGCCGCCGCCGCAGAAGCCGCCGCCATCAAACAAGAACCGGAAACGACGTCGTGTGAGGACGAAGATACTTGGTTTGATTTGCCGGATCTAATTACCAATGGATTTTTACTGGGTTTTGATCATTATTCATCATCGCCATCATCGTCGTCGTCTTCTTCGCCATGGCAATTTCTTGCAGATGATCATGACGACCACCATCTTCAATGGCACTCTGATTTTTCTCATATTATTTTTCCAGCTTGAGTTTTTTTTTTTCTTTTTTTTTCTTTTTTTAAGTTAAATTAAATTCTGCTTTTTGTAATATTCTCTCTTGCCAAGAGG

Coding sequence (CDS)

ATGACCACAAACTCCTATCATTCCACCACCAGTTCCTCCGCCGTAACCAGCCGGAAAAGACAGAGGAGCACAACCACCACCGAAAGCGAATCGGAAGAATCAACCCCAAAATTCAGAGGAGTAAGGCTAAGAACATGGGGAAAATGGGTATCTGAAATAAGAGAGCCAAGGAAAAAATCAAGAATTTGGCTCGGCACATATCCAACGGCGGAGATGGCGGCGCGTGCACATGACGTGGCTGCACTTGCCATCAAAGGCCACCGTGCTTTCCTCAATTTCCCTCAACTCAAACACCATCTCCCTCGCCCTGCCTCTCTCTCCGCCAAAGACATTCAAGCCGCCGCCGCAGAAGCCGCCGCCATCAAACAAGAACCGGAAACGACGTCGTGTGAGGACGAAGATACTTGGTTTGATTTGCCGGATCTAATTACCAATGGATTTTTACTGGGTTTTGATCATTATTCATCATCGCCATCATCGTCGTCGTCTTCTTCGCCATGGCAATTTCTTGCAGATGATCATGACGACCACCATCTTCAATGGCACTCTGATTTTTCTCATATTATTTTTCCAGCTTGA

Protein sequence

MTTNSYHSTTSSSAVTSRKRQRSTTTTESESEESTPKFRGVRLRTWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHHLPRPASLSAKDIQAAAAEAAAIKQEPETTSCEDEDTWFDLPDLITNGFLLGFDHYSSSPSSSSSSSPWQFLADDHDDHHLQWHSDFSHIIFPA

Homology

[Close]

BLAST of Clc06G02740 vs. NCBI nr
Match: XP_038875584.1 (ethylene-responsive transcription factor ERF039 [Benincasa hispida])

HSP 1 Score: 318.9 bits (816), Expect = 2.9e-83
Identity = 174/199 (87.44%), Postives = 181/199 (90.95%), Query Frame = 0


Query: 1   MTTNSYHSTTSSSAV----TSRKRQRSTTTTESESEESTPKFRGVRLRTWGKWVSEIREP 60
           MTTNS+HSTTSSSAV    TSRKRQRST  TESESEESTPKFRGVRLRTWGKWVSEIREP
Sbjct: 1   MTTNSHHSTTSSSAVSSAETSRKRQRSTAATESESEESTPKFRGVRLRTWGKWVSEIREP 60

Query: 61  RKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHHLPRPASLSAKDIQAAAA 120
           RKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHHLPRPASLSAKDIQAAAA
Sbjct: 61  RKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHHLPRPASLSAKDIQAAAA 120

Query: 121 EAAAIKQEPETTSC--EDEDTWFDLPDLITNGFLLGFDHYSSSPS-SSSSSSPWQFLADD 180
           +AAA+K E ETTS   E+EDTWFDLPDLI+NGFLLGF+ YSSS S SSSSSS WQFLADD
Sbjct: 121 QAAALKPESETTSFQEEEEDTWFDLPDLISNGFLLGFNSYSSSSSPSSSSSSQWQFLADD 180

Query: 181 -HDDHHLQWHSDFSHIIFP 192
            HD+HHLQW SDFSH IFP
Sbjct: 181 YHDEHHLQWQSDFSHPIFP 199

[Close]

BLAST of Clc06G02740 vs. NCBI nr
Match: XP_008460188.1 (PREDICTED: ethylene-responsive transcription factor ERF039-like [Cucumis melo] >KAA0047018.1 ethylene-responsive transcription factor ERF039-like protein [Cucumis melo var. makuwa] >TYK20971.1 ethylene-responsive transcription factor ERF039-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 305.4 bits (781), Expect = 3.4e-79
Identity = 168/201 (83.58%), Postives = 181/201 (90.05%), Query Frame = 0


Query: 1   MTTNSYHSTTSSSAVTSRKRQRSTTT--TESESEE--STPKFRGVRLRTWGKWVSEIREP 60
           MTTNS+HSTTSSSA TSRKRQRS+T+  TESES++  STPKFRGVRLRTWGKWVSEIREP
Sbjct: 1   MTTNSHHSTTSSSATTSRKRQRSSTSSATESESDQEISTPKFRGVRLRTWGKWVSEIREP 60

Query: 61  RKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHHLPRPASLSAKDIQAAAA 120
           RKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKH LPRPASLSAKDIQAAAA
Sbjct: 61  RKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHQLPRPASLSAKDIQAAAA 120

Query: 121 EAAAIKQEPET-TSC---EDEDTWFDLPDLI-TNGFLLGFD-HYSSSPSSSSSSSPWQFL 180
           +AAA+K EPET TSC   E+E TWFDLPDLI +NGFLLG D +YSSS SSSSSS+ WQFL
Sbjct: 121 QAAALKHEPETATSCRGEEEESTWFDLPDLIVSNGFLLGLDENYSSSCSSSSSSTSWQFL 180

Query: 181 ADDHDDHHLQWHSDFSHIIFP 192
            DDH+D+H QWHSDFSH IFP
Sbjct: 181 VDDHEDNHFQWHSDFSHTIFP 201

[Close]

BLAST of Clc06G02740 vs. NCBI nr
Match: XP_004140628.1 (ethylene-responsive transcription factor ERF039 [Cucumis sativus] >KGN46508.1 hypothetical protein Csa_005052 [Cucumis sativus])

HSP 1 Score: 294.7 bits (753), Expect = 5.9e-76
Identity = 167/212 (78.77%), Postives = 179/212 (84.43%), Query Frame = 0


Query: 1   MTTNSYHSTTSSSAV-----TSRKRQRSTTT----TESESEESTPKFRGVRLRTWGKWVS 60
           MTTNS+HSTTSSSAV     TSRKRQRS+T+    +ES+ E STPKFRGVRLR WGKWVS
Sbjct: 1   MTTNSHHSTTSSSAVSCLTATSRKRQRSSTSSATESESDQESSTPKFRGVRLRAWGKWVS 60

Query: 61  EIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHHLPRPASLSAKDI 120
           EIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKH LPRPASLSAKDI
Sbjct: 61  EIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHQLPRPASLSAKDI 120

Query: 121 QAAAAEAAAIKQEPET-TSC--------EDEDTWFDLPDLI-TNGFLLGFD-HYSSS-PS 180
           QAAAA+AAA+K EPET TSC        E+E TWFDLPDLI +NGFLLG D +YSSS  S
Sbjct: 121 QAAAAQAAALKHEPETPTSCLEEGLEEEEEESTWFDLPDLIVSNGFLLGLDENYSSSCSS 180

Query: 181 SSSSSSPWQFLADDHDDHHLQWHSDFSHIIFP 192
           SSSSSS WQFL DDH+D+H QWHSDFSH IFP
Sbjct: 181 SSSSSSSWQFLVDDHEDNHFQWHSDFSHTIFP 212

[Close]

BLAST of Clc06G02740 vs. NCBI nr
Match: KAG7013824.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 268.9 bits (686), Expect = 3.5e-68
Identity = 151/204 (74.02%), Postives = 164/204 (80.39%), Query Frame = 0


Query: 1   MTTNSYHSTTSSSAVTSRKRQRSTTTTESESEESTPKFRGVRLRTWGKWVSEIREPRKKS 60
           MTT S+HS T SSAVT RKR+R+ T      EESTPKFRGVRLR WGKWVSEIREPRKKS
Sbjct: 1   MTTTSHHSATVSSAVTCRKRRRTLT------EESTPKFRGVRLRAWGKWVSEIREPRKKS 60

Query: 61  RIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHHLPRPASLSAKDIQAAAAEAAA 120
           RIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ+KH LPRPASLSAKDIQAAAA+AAA
Sbjct: 61  RIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAA 120

Query: 121 IKQEP--------ETTSCEDEDTWFDLPDL----ITNGFLLGFDHYSSSPSSSSSSSPWQ 180
           +K +P        ETTSCE+EDTWFDLPDL    I +GFLL FD+     SSSSSSS W 
Sbjct: 121 LKHQPNPTESSPSETTSCEEEDTWFDLPDLVVRGINDGFLLDFDY----SSSSSSSSSWH 180

Query: 181 FLADDHDDHHLQWHSDFSHIIFPA 193
           F + DHDD  LQWHSD++H IFPA
Sbjct: 181 F-SGDHDD--LQWHSDYAHTIFPA 191

[Close]

BLAST of Clc06G02740 vs. NCBI nr
Match: XP_022959279.1 (ethylene-responsive transcription factor ERF039-like [Cucurbita moschata])

HSP 1 Score: 268.9 bits (686), Expect = 3.5e-68
Identity = 151/204 (74.02%), Postives = 164/204 (80.39%), Query Frame = 0


Query: 1   MTTNSYHSTTSSSAVTSRKRQRSTTTTESESEESTPKFRGVRLRTWGKWVSEIREPRKKS 60
           MTT S+HS T SSAVT RKR+R+ T      EESTPKFRGVRLR WGKWVSEIREPRKKS
Sbjct: 1   MTTTSHHSATVSSAVTCRKRRRTLT------EESTPKFRGVRLRAWGKWVSEIREPRKKS 60

Query: 61  RIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHHLPRPASLSAKDIQAAAAEAAA 120
           RIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ+KH LPRPASLSAKDIQAAAA+AAA
Sbjct: 61  RIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAA 120

Query: 121 IKQEP--------ETTSCEDEDTWFDLPDL----ITNGFLLGFDHYSSSPSSSSSSSPWQ 180
           +K +P        ETTSCE+EDTWFDLPDL    I +GFLL FD+     SSSSSSS W 
Sbjct: 121 LKHQPNPTESSPSETTSCEEEDTWFDLPDLVVRGINDGFLLDFDY-----SSSSSSSSWH 180

Query: 181 FLADDHDDHHLQWHSDFSHIIFPA 193
           F + DHDD  LQWHSD++H IFPA
Sbjct: 181 F-SGDHDD--LQWHSDYAHTIFPA 190

[Close]

BLAST of Clc06G02740 vs. ExPASy Swiss-Prot
Match: Q9SUK8 (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana OX=3702 GN=ERF039 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 8.4e-33
Identity = 86/152 (56.58%), Postives = 102/152 (67.11%), Query Frame = 0


Query: 1   MTTNSYHSTTSS--SAVTSRKRQRSTTTTESESEESTPKFRGVRLRTWGKWVSEIREPRK 60
           M  +S H +  +  S V  +  + S T  E +     P FRGVR+R WGKWVSEIREPRK
Sbjct: 1   MQDSSSHESQRNLRSPVPEKTGKSSKTKNEQKGVSKQPNFRGVRMRQWGKWVSEIREPRK 60

Query: 61  KSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHHLPRPASLSAKDIQAAAAEA 120
           KSRIWLGT+ T EMAARAHDVAALAIKG  A LNFP+L +HLPRPAS   KDIQ AAA A
Sbjct: 61  KSRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQEAAAAA 120

Query: 121 AAIK-QEPE------TTSCEDEDTWFDLPDLI 144
           AA+  + PE      T+S   +D + DLPDL+
Sbjct: 121 AAVDWKAPESPSSTVTSSPVADDAFSDLPDLL 152

[Close]

BLAST of Clc06G02740 vs. ExPASy Swiss-Prot
Match: Q9ZQP3 (Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana OX=3702 GN=ERF038 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.2e-32
Identity = 84/156 (53.85%), Postives = 99/156 (63.46%), Query Frame = 0


Query: 9   TTSSSAVTSRKRQRSTTTTESESEESTPKFRGVRLRTWGKWVSEIREPRKKSRIWLGTYP 68
           TT        K++R+    + +     P FRGVR+R WGKWVSEIREP+KKSRIWLGT+ 
Sbjct: 16  TTERRVKYKPKKKRAKDDDDEKVVSKHPNFRGVRMRQWGKWVSEIREPKKKSRIWLGTFS 75

Query: 69  TAEMAARAHDVAALAIKGHRAFLNFPQLKHHLPRPASLSAKDIQAAAAEAA---AIKQEP 128
           TAEMAARAHDVAALAIKG  A LNFP+L +HLPRPAS   KDIQAAAA AA   AI  + 
Sbjct: 76  TAEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQAAAAAAAAAVAIDMDV 135

Query: 129 ETTS----------------CEDEDTWFDLPDLITN 146
           ET+S                   +D + DLPDL+ N
Sbjct: 136 ETSSPSPSPTVTETSSPAMIALSDDAFSDLPDLLLN 171

[Close]

BLAST of Clc06G02740 vs. ExPASy Swiss-Prot
Match: Q52QU1 (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 GN=ERF042 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 7.1e-32
Identity = 82/145 (56.55%), Postives = 100/145 (68.97%), Query Frame = 0


Query: 24  TTTTESESEESTPK---FRGVRLRTWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVA 83
           T  +  + +E T +   +RG R+R+WGKWVSEIREPRKKSRIWLGT+PTAEMAARAHDVA
Sbjct: 9   TECSSKKKKEKTKEKGVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVA 68

Query: 84  ALAIKGHRAFLNFPQLKHHLPRPASLSAKDIQAAAAEAAAIKQEPETTSCEDEDTWFDLP 143
           AL+IKG  A LNFP+L   LPRP SLS +DIQAAAAEAA +  +      +D+ T     
Sbjct: 69  ALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALMDFKTVPFHLQDDST----- 128

Query: 144 DLITNGFLLGFDHYSSSPSSSSSSS 166
            L T       + +SSS SS+SSSS
Sbjct: 129 PLQTRCDTEKIEKWSSSSSSASSSS 148

[Close]

BLAST of Clc06G02740 vs. ExPASy Swiss-Prot
Match: Q9M210 (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana OX=3702 GN=ERF035 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.6e-31
Identity = 84/154 (54.55%), Postives = 105/154 (68.18%), Query Frame = 0


Query: 19  KRQRSTTTTESESEESTPKFRGVRLRTWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHD 78
           KR++S  + ++++  S   +RGVR+R+WGKWVSEIREPRKKSRIWLGTYPTAEMAARAHD
Sbjct: 55  KRRKSNVSDDNKNPTS---YRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHD 114

Query: 79  VAALAIKGHRAFLNFPQLKHHLPRPASLSAKDIQAAAAEAAAIKQEPETTSCEDEDTWFD 138
           VAALAIKG+  FLNFP+L   LPRP S S KDIQAAA +AA      E T+         
Sbjct: 115 VAALAIKGNSGFLNFPELSGLLPRPVSCSPKDIQAAATKAA------EATTWHKPVIDKK 174

Query: 139 LPDLITNGFLLGFDHYSSSPSSSSSSSPWQFLAD 173
           L D +++  LL       S + SS+SS + F +D
Sbjct: 175 LADELSHSELL-------STAQSSTSSSFVFSSD 192

[Close]

BLAST of Clc06G02740 vs. ExPASy Swiss-Prot
Match: O80654 (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 GN=ERF037 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 6.7e-30
Identity = 88/170 (51.76%), Postives = 104/170 (61.18%), Query Frame = 0


Query: 1   MTTNSYHSTTSSSAVTSRK-----RQRSTTTTESESEESTPKFRGVRLRTWGKWVSEIRE 60
           MT +S  S   SS V   +     +Q S  T   +   S P +RGVR+RTWGKWVSEIRE
Sbjct: 1   MTESSIISVKQSSPVPEEEDHHHHQQDSHRTNTKKRVRSDPGYRGVRMRTWGKWVSEIRE 60

Query: 61  PRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHHLPRPASLSAKDIQAAA 120
           PRKKSRIWLGT+ T EMAARAHD AAL IKG  A LNFP+L  +LPRPAS S +D+QAAA
Sbjct: 61  PRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQAAA 120

Query: 121 AEAAAIKQEPETTSCEDEDTWFDLPDLITNGFLLGFDHYSSSPSSSSSSS 166
           A AAA+   P ++S    D    +    T    L    YS+  SSS S S
Sbjct: 121 AVAAAMDFSPSSSSLVVSDPTTVIAPAETQ---LSSSSYSTCTSSSLSPS 167

[Close]

BLAST of Clc06G02740 vs. ExPASy TrEMBL
Match: A0A5A7TVV7 (Ethylene-responsive transcription factor ERF039-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73575G00010 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.6e-79
Identity = 168/201 (83.58%), Postives = 181/201 (90.05%), Query Frame = 0


Query: 1   MTTNSYHSTTSSSAVTSRKRQRSTTT--TESESEE--STPKFRGVRLRTWGKWVSEIREP 60
           MTTNS+HSTTSSSA TSRKRQRS+T+  TESES++  STPKFRGVRLRTWGKWVSEIREP
Sbjct: 1   MTTNSHHSTTSSSATTSRKRQRSSTSSATESESDQEISTPKFRGVRLRTWGKWVSEIREP 60

Query: 61  RKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHHLPRPASLSAKDIQAAAA 120
           RKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKH LPRPASLSAKDIQAAAA
Sbjct: 61  RKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHQLPRPASLSAKDIQAAAA 120

Query: 121 EAAAIKQEPET-TSC---EDEDTWFDLPDLI-TNGFLLGFD-HYSSSPSSSSSSSPWQFL 180
           +AAA+K EPET TSC   E+E TWFDLPDLI +NGFLLG D +YSSS SSSSSS+ WQFL
Sbjct: 121 QAAALKHEPETATSCRGEEEESTWFDLPDLIVSNGFLLGLDENYSSSCSSSSSSTSWQFL 180

Query: 181 ADDHDDHHLQWHSDFSHIIFP 192
            DDH+D+H QWHSDFSH IFP
Sbjct: 181 VDDHEDNHFQWHSDFSHTIFP 201

[Close]

BLAST of Clc06G02740 vs. ExPASy TrEMBL
Match: A0A1S3CBH6 (ethylene-responsive transcription factor ERF039-like OS=Cucumis melo OX=3656 GN=LOC103499073 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.6e-79
Identity = 168/201 (83.58%), Postives = 181/201 (90.05%), Query Frame = 0


Query: 1   MTTNSYHSTTSSSAVTSRKRQRSTTT--TESESEE--STPKFRGVRLRTWGKWVSEIREP 60
           MTTNS+HSTTSSSA TSRKRQRS+T+  TESES++  STPKFRGVRLRTWGKWVSEIREP
Sbjct: 1   MTTNSHHSTTSSSATTSRKRQRSSTSSATESESDQEISTPKFRGVRLRTWGKWVSEIREP 60

Query: 61  RKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHHLPRPASLSAKDIQAAAA 120
           RKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKH LPRPASLSAKDIQAAAA
Sbjct: 61  RKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHQLPRPASLSAKDIQAAAA 120

Query: 121 EAAAIKQEPET-TSC---EDEDTWFDLPDLI-TNGFLLGFD-HYSSSPSSSSSSSPWQFL 180
           +AAA+K EPET TSC   E+E TWFDLPDLI +NGFLLG D +YSSS SSSSSS+ WQFL
Sbjct: 121 QAAALKHEPETATSCRGEEEESTWFDLPDLIVSNGFLLGLDENYSSSCSSSSSSTSWQFL 180

Query: 181 ADDHDDHHLQWHSDFSHIIFP 192
            DDH+D+H QWHSDFSH IFP
Sbjct: 181 VDDHEDNHFQWHSDFSHTIFP 201

[Close]

BLAST of Clc06G02740 vs. ExPASy TrEMBL
Match: A0A0A0KAN0 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G104640 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.9e-76
Identity = 167/212 (78.77%), Postives = 179/212 (84.43%), Query Frame = 0


Query: 1   MTTNSYHSTTSSSAV-----TSRKRQRSTTT----TESESEESTPKFRGVRLRTWGKWVS 60
           MTTNS+HSTTSSSAV     TSRKRQRS+T+    +ES+ E STPKFRGVRLR WGKWVS
Sbjct: 1   MTTNSHHSTTSSSAVSCLTATSRKRQRSSTSSATESESDQESSTPKFRGVRLRAWGKWVS 60

Query: 61  EIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHHLPRPASLSAKDI 120
           EIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKH LPRPASLSAKDI
Sbjct: 61  EIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHQLPRPASLSAKDI 120

Query: 121 QAAAAEAAAIKQEPET-TSC--------EDEDTWFDLPDLI-TNGFLLGFD-HYSSS-PS 180
           QAAAA+AAA+K EPET TSC        E+E TWFDLPDLI +NGFLLG D +YSSS  S
Sbjct: 121 QAAAAQAAALKHEPETPTSCLEEGLEEEEEESTWFDLPDLIVSNGFLLGLDENYSSSCSS 180

Query: 181 SSSSSSPWQFLADDHDDHHLQWHSDFSHIIFP 192
           SSSSSS WQFL DDH+D+H QWHSDFSH IFP
Sbjct: 181 SSSSSSSWQFLVDDHEDNHFQWHSDFSHTIFP 212

[Close]

BLAST of Clc06G02740 vs. ExPASy TrEMBL
Match: A0A6J1H7L4 (ethylene-responsive transcription factor ERF039-like OS=Cucurbita moschata OX=3662 GN=LOC111460308 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.7e-68
Identity = 151/204 (74.02%), Postives = 164/204 (80.39%), Query Frame = 0


Query: 1   MTTNSYHSTTSSSAVTSRKRQRSTTTTESESEESTPKFRGVRLRTWGKWVSEIREPRKKS 60
           MTT S+HS T SSAVT RKR+R+ T      EESTPKFRGVRLR WGKWVSEIREPRKKS
Sbjct: 1   MTTTSHHSATVSSAVTCRKRRRTLT------EESTPKFRGVRLRAWGKWVSEIREPRKKS 60

Query: 61  RIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHHLPRPASLSAKDIQAAAAEAAA 120
           RIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ+KH LPRPASLSAKDIQAAAA+AAA
Sbjct: 61  RIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAA 120

Query: 121 IKQEP--------ETTSCEDEDTWFDLPDL----ITNGFLLGFDHYSSSPSSSSSSSPWQ 180
           +K +P        ETTSCE+EDTWFDLPDL    I +GFLL FD+     SSSSSSS W 
Sbjct: 121 LKHQPNPTESSPSETTSCEEEDTWFDLPDLVVRGINDGFLLDFDY-----SSSSSSSSWH 180

Query: 181 FLADDHDDHHLQWHSDFSHIIFPA 193
           F + DHDD  LQWHSD++H IFPA
Sbjct: 181 F-SGDHDD--LQWHSDYAHTIFPA 190

[Close]

BLAST of Clc06G02740 vs. ExPASy TrEMBL
Match: A0A6J1I9W3 (ethylene-responsive transcription factor ERF039-like OS=Cucurbita maxima OX=3661 GN=LOC111472927 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 4.9e-68
Identity = 150/204 (73.53%), Postives = 164/204 (80.39%), Query Frame = 0


Query: 1   MTTNSYHSTTSSSAVTSRKRQRSTTTTESESEESTPKFRGVRLRTWGKWVSEIREPRKKS 60
           MTT S+HS T SSAVT RKR+R+ T      EESTPKFRGVRLR WGKWVSEIREPRKKS
Sbjct: 1   MTTTSHHSATVSSAVTCRKRRRTLT------EESTPKFRGVRLRAWGKWVSEIREPRKKS 60

Query: 61  RIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHHLPRPASLSAKDIQAAAAEAAA 120
           RIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ+KH LPRPASLSAKDIQAAAA+AAA
Sbjct: 61  RIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAA 120

Query: 121 IKQEP--------ETTSCEDEDTWFDLPDL----ITNGFLLGFDHYSSSPSSSSSSSPWQ 180
           +K +P        ETTSCE+E+TWFDLPDL    I +GFLL FD+     SSSSSSS W 
Sbjct: 121 LKHQPNPTESSPSETTSCEEEETWFDLPDLVVRGINDGFLLDFDY----SSSSSSSSSWH 180

Query: 181 FLADDHDDHHLQWHSDFSHIIFPA 193
           F + DHDD  LQWHSD++H IFPA
Sbjct: 181 F-SGDHDD--LQWHSDYAHTIFPA 191

[Close]

BLAST of Clc06G02740 vs. TAIR 10
Match: AT4G16750.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 141.7 bits (356), Expect = 6.0e-34
Identity = 86/152 (56.58%), Postives = 102/152 (67.11%), Query Frame = 0


Query: 1   MTTNSYHSTTSS--SAVTSRKRQRSTTTTESESEESTPKFRGVRLRTWGKWVSEIREPRK 60
           M  +S H +  +  S V  +  + S T  E +     P FRGVR+R WGKWVSEIREPRK
Sbjct: 1   MQDSSSHESQRNLRSPVPEKTGKSSKTKNEQKGVSKQPNFRGVRMRQWGKWVSEIREPRK 60

Query: 61  KSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHHLPRPASLSAKDIQAAAAEA 120
           KSRIWLGT+ T EMAARAHDVAALAIKG  A LNFP+L +HLPRPAS   KDIQ AAA A
Sbjct: 61  KSRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQEAAAAA 120

Query: 121 AAIK-QEPE------TTSCEDEDTWFDLPDLI 144
           AA+  + PE      T+S   +D + DLPDL+
Sbjct: 121 AAVDWKAPESPSSTVTSSPVADDAFSDLPDLL 152

[Close]

BLAST of Clc06G02740 vs. TAIR 10
Match: AT2G35700.1 (ERF family protein 38 )

HSP 1 Score: 139.8 bits (351), Expect = 2.3e-33
Identity = 84/156 (53.85%), Postives = 99/156 (63.46%), Query Frame = 0


Query: 9   TTSSSAVTSRKRQRSTTTTESESEESTPKFRGVRLRTWGKWVSEIREPRKKSRIWLGTYP 68
           TT        K++R+    + +     P FRGVR+R WGKWVSEIREP+KKSRIWLGT+ 
Sbjct: 16  TTERRVKYKPKKKRAKDDDDEKVVSKHPNFRGVRMRQWGKWVSEIREPKKKSRIWLGTFS 75

Query: 69  TAEMAARAHDVAALAIKGHRAFLNFPQLKHHLPRPASLSAKDIQAAAAEAA---AIKQEP 128
           TAEMAARAHDVAALAIKG  A LNFP+L +HLPRPAS   KDIQAAAA AA   AI  + 
Sbjct: 76  TAEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQAAAAAAAAAVAIDMDV 135

Query: 129 ETTS----------------CEDEDTWFDLPDLITN 146
           ET+S                   +D + DLPDL+ N
Sbjct: 136 ETSSPSPSPTVTETSSPAMIALSDDAFSDLPDLLLN 171

[Close]

BLAST of Clc06G02740 vs. TAIR 10
Match: AT2G25820.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 138.7 bits (348), Expect = 5.1e-33
Identity = 82/145 (56.55%), Postives = 100/145 (68.97%), Query Frame = 0


Query: 24  TTTTESESEESTPK---FRGVRLRTWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVA 83
           T  +  + +E T +   +RG R+R+WGKWVSEIREPRKKSRIWLGT+PTAEMAARAHDVA
Sbjct: 9   TECSSKKKKEKTKEKGVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVA 68

Query: 84  ALAIKGHRAFLNFPQLKHHLPRPASLSAKDIQAAAAEAAAIKQEPETTSCEDEDTWFDLP 143
           AL+IKG  A LNFP+L   LPRP SLS +DIQAAAAEAA +  +      +D+ T     
Sbjct: 69  ALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALMDFKTVPFHLQDDST----- 128

Query: 144 DLITNGFLLGFDHYSSSPSSSSSSS 166
            L T       + +SSS SS+SSSS
Sbjct: 129 PLQTRCDTEKIEKWSSSSSSASSSS 148

[Close]

BLAST of Clc06G02740 vs. TAIR 10
Match: AT3G60490.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-32
Identity = 84/154 (54.55%), Postives = 105/154 (68.18%), Query Frame = 0


Query: 19  KRQRSTTTTESESEESTPKFRGVRLRTWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHD 78
           KR++S  + ++++  S   +RGVR+R+WGKWVSEIREPRKKSRIWLGTYPTAEMAARAHD
Sbjct: 55  KRRKSNVSDDNKNPTS---YRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHD 114

Query: 79  VAALAIKGHRAFLNFPQLKHHLPRPASLSAKDIQAAAAEAAAIKQEPETTSCEDEDTWFD 138
           VAALAIKG+  FLNFP+L   LPRP S S KDIQAAA +AA      E T+         
Sbjct: 115 VAALAIKGNSGFLNFPELSGLLPRPVSCSPKDIQAAATKAA------EATTWHKPVIDKK 174

Query: 139 LPDLITNGFLLGFDHYSSSPSSSSSSSPWQFLAD 173
           L D +++  LL       S + SS+SS + F +D
Sbjct: 175 LADELSHSELL-------STAQSSTSSSFVFSSD 192

[Close]

BLAST of Clc06G02740 vs. TAIR 10
Match: AT1G77200.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 132.1 bits (331), Expect = 4.7e-31
Identity = 88/170 (51.76%), Postives = 104/170 (61.18%), Query Frame = 0


Query: 1   MTTNSYHSTTSSSAVTSRK-----RQRSTTTTESESEESTPKFRGVRLRTWGKWVSEIRE 60
           MT +S  S   SS V   +     +Q S  T   +   S P +RGVR+RTWGKWVSEIRE
Sbjct: 1   MTESSIISVKQSSPVPEEEDHHHHQQDSHRTNTKKRVRSDPGYRGVRMRTWGKWVSEIRE 60

Query: 61  PRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHHLPRPASLSAKDIQAAA 120
           PRKKSRIWLGT+ T EMAARAHD AAL IKG  A LNFP+L  +LPRPAS S +D+QAAA
Sbjct: 61  PRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQAAA 120

Query: 121 AEAAAIKQEPETTSCEDEDTWFDLPDLITNGFLLGFDHYSSSPSSSSSSS 166
           A AAA+   P ++S    D    +    T    L    YS+  SSS S S
Sbjct: 121 AVAAAMDFSPSSSSLVVSDPTTVIAPAETQ---LSSSSYSTCTSSSLSPS 167

The following BLAST results are available for this feature:

BLAST of Clc06G02740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875584.1	2.9e-83	87.44	ethylene-responsive transcription factor ERF039 [Benincasa hispida]	[more]
XP_008460188.1	3.4e-79	83.58	PREDICTED: ethylene-responsive transcription factor ERF039-like [Cucumis melo] >...	[more]
XP_004140628.1	5.9e-76	78.77	ethylene-responsive transcription factor ERF039 [Cucumis sativus] >KGN46508.1 hy...	[more]
KAG7013824.1	3.5e-68	74.02	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_022959279.1	3.5e-68	74.02	ethylene-responsive transcription factor ERF039-like [Cucurbita moschata]	[more]

BLAST of Clc06G02740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SUK8	8.4e-33	56.58	Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9ZQP3	3.2e-32	53.85	Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q52QU1	7.1e-32	56.55	Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9M210	1.6e-31	54.55	Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana OX=3702 ...	[more]
O80654	6.7e-30	51.76	Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Clc06G02740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TVV7	1.6e-79	83.58	Ethylene-responsive transcription factor ERF039-like protein OS=Cucumis melo var...	[more]
A0A1S3CBH6	1.6e-79	83.58	ethylene-responsive transcription factor ERF039-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0KAN0	2.9e-76	78.77	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G104640 PE=...	[more]
A0A6J1H7L4	1.7e-68	74.02	ethylene-responsive transcription factor ERF039-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1I9W3	4.9e-68	73.53	ethylene-responsive transcription factor ERF039-like OS=Cucurbita maxima OX=3661...	[more]

BLAST of Clc06G02740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16750.1	6.0e-34	56.58	Integrase-type DNA-binding superfamily protein	[more]
AT2G35700.1	2.3e-33	53.85	ERF family protein 38	[more]
AT2G25820.1	5.1e-33	56.55	Integrase-type DNA-binding superfamily protein	[more]
AT3G60490.1	1.1e-32	54.55	Integrase-type DNA-binding superfamily protein	[more]
AT1G77200.1	4.7e-31	51.76	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 38..49 score: 63.64 coord: 60..76 score: 66.1
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 37..100 e-value: 8.5E-36 score: 134.9
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 36..87 e-value: 5.5E-15 score: 55.4
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 37..94 score: 22.918894
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 36..94 e-value: 3.40548E-31 score: 106.202
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 37..95 e-value: 1.8E-24 score: 87.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	PANTHER	PTHR31985:SF5	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042	coord: 4..165
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 4..165
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 37..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G02740.1	Clc06G02740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity