Clc06G02270 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGTGCGAATTGCATGCACACTCGTGGGTTGAATTGGCCACCTTCCGCCTCATCTTCCAAGAGTGATTCTCATAAGATTTCAATTTGTGACTCACCTAGTCCAGGACCCAATTGAGCATTGGGCCAAGTTTATTTTAGTCTCGAGTCTTGCCTTTCGTCACCTTTAATCCTAAATAATGGAGAAATTAGCCCAAACTTTTTTGAGTTCAAATCTACCCAAAACAATTAATTGACATCTTTAATTTTTCCTATAAATACACATAAAAGATCTCATCTACTAATCTGATTATGAATATGAATGTAATTAACAAGATTTATAACTTAGTTTGTGATTAAAAGAATTTGATTTACAAAACTATTTATGGATAACAATATTTCATCTTATATCTACAAAATTAAAAGAAAAATTTAGGGATTATTTAGGCCACACCTATATTTGTGGAGTCTAAATACTTATTTAATAAAAATAATTTTTCTATTTTTTATGTGGGAAAGAAAAGTAGTTGTGCCTAATTATGGCTCAAATTAAAATGATTGAAACGATTTTGGTAGGTACTAATTGTTTAGGAATTTTTTAGTGCAACGGTGATCGAAAGAGGTATTATTGTAGTTTTAGAAATTTAATAATTCTTTTGAAAAAAAGCGGGAAAGGATTGCCTGTGAGGCACCAAGTCCTATATAAATTGCGGAGCTGATGGGTCACTTTAGCAAAACCCAACTCATCTCTTTCATTCGCTCACCGCCATCAATTTACCGGGTCGGAGCAAATGGAGAAAAACCAGAAGCGGAAAGGCTTCATGAGGCGACTATATCGAGCCGCAAGATACGCCGGCAAGGCCAAAGTGAAGCAAAGCAACCCCCCGGCGGCGTCTACATCGCTACATAGCGACGGCGGCGACGACTCTTTTGCGTTGTCGAGCGAGATGAGATCTGCAAGTAATCCGAAAAGATCCATGACGACAGTGCAGAAGCAGGCCTCATCGGTGCATGGCGGATTTCGCGACGGAATCAGTGAAATGCGGGGAGCATACGGTGGTTGTGGCGGTGGTGACGAGAATGTTGACGCAAAGGCAGCGACGTACATTTTGTTGGTAAGAGAGCGTTTGAAGATGGAGAGGTCCATGGATCGAAAAGTTGAAGCAAATTGA ATGGGGTCGGAGCAAATGGAGAAAAACCAGAAGCGGAAAGGCTTCATGAGGCGACTATATCGAGCCGCAAGATACGCCGGCAAGGCCAAAGTGAAGCAAAGCAACCCCCCGGCGGCGTCTACATCGCTACATAGCGACGGCGGCGACGACTCTTTTGCGTTGTCGAGCGAGATGAGATCTGCAAGTAATCCGAAAAGATCCATGACGACAGTGCAGAAGCAGGCCTCATCGGTGCATGGCGGATTTCGCGACGGAATCAGTGAAATGCGGGGAGCATACGGTGGTTGTGGCGGTGGTGACGAGAATGTTGACGCAAAGGCAGCGACGTACATTTTGTTGGTAAGAGAGCGTTTGAAGATGGAGAGGTCCATGGATCGAAAAGTTGAAGCAAATTGA ATGGGGTCGGAGCAAATGGAGAAAAACCAGAAGCGGAAAGGCTTCATGAGGCGACTATATCGAGCCGCAAGATACGCCGGCAAGGCCAAAGTGAAGCAAAGCAACCCCCCGGCGGCGTCTACATCGCTACATAGCGACGGCGGCGACGACTCTTTTGCGTTGTCGAGCGAGATGAGATCTGCAAGTAATCCGAAAAGATCCATGACGACAGTGCAGAAGCAGGCCTCATCGGTGCATGGCGGATTTCGCGACGGAATCAGTGAAATGCGGGGAGCATACGGTGGTTGTGGCGGTGGTGACGAGAATGTTGACGCAAAGGCAGCGACGTACATTTTGTTGGTAAGAGAGCGTTTGAAGATGGAGAGGTCCATGGATCGAAAAGTTGAAGCAAATTGA MGSEQMEKNQKRKGFMRRLYRAARYAGKAKVKQSNPPAASTSLHSDGGDDSFALSSEMRSASNPKRSMTTVQKQASSVHGGFRDGISEMRGAYGGCGGGDENVDAKAATYILLVRERLKMERSMDRKVEAN Homology
BLAST of Clc06G02270 vs. NCBI nr
Match: KAA0039815.1 (hypothetical protein E6C27_scaffold122G00900 [Cucumis melo var. makuwa] >TYK24682.1 hypothetical protein E5676_scaffold266G002320 [Cucumis melo var. makuwa]) HSP 1 Score: 154.5 bits (389), Expect = 6.5e-34 Identity = 91/125 (72.80%), Postives = 97/125 (77.60%), Query Frame = 0
BLAST of Clc06G02270 vs. NCBI nr
Match: KGN46459.1 (hypothetical protein Csa_005040 [Cucumis sativus]) HSP 1 Score: 153.3 bits (386), Expect = 1.5e-33 Identity = 90/125 (72.00%), Postives = 96/125 (76.80%), Query Frame = 0
BLAST of Clc06G02270 vs. NCBI nr
Match: KAG6592959.1 (hypothetical protein SDJN03_12435, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 118.2 bits (295), Expect = 5.2e-23 Identity = 77/117 (65.81%), Postives = 80/117 (68.38%), Query Frame = 0
BLAST of Clc06G02270 vs. NCBI nr
Match: RWR80007.1 (hypothetical protein CKAN_00861200 [Cinnamomum micranthum f. kanehirae]) HSP 1 Score: 56.6 bits (135), Expect = 1.9e-04 Identity = 46/133 (34.59%), Postives = 68/133 (51.13%), Query Frame = 0
BLAST of Clc06G02270 vs. ExPASy TrEMBL
Match: A0A5A7TED2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002320 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 3.2e-34 Identity = 91/125 (72.80%), Postives = 97/125 (77.60%), Query Frame = 0
BLAST of Clc06G02270 vs. ExPASy TrEMBL
Match: A0A0A0KCA4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G094770 PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 7.0e-34 Identity = 90/125 (72.00%), Postives = 96/125 (76.80%), Query Frame = 0
BLAST of Clc06G02270 vs. ExPASy TrEMBL
Match: A0A443NNB4 (Uncharacterized protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_00861200 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 9.0e-05 Identity = 46/133 (34.59%), Postives = 68/133 (51.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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