Clc06G01260 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G01260
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Ubiquitin-like domain-containing protein
Location	ClcChr06: 1124593 .. 1129549 (+)
RNA-Seq Expression	Clc06G01260
Synteny	Clc06G01260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAAGAGATTGAAGAGCAAAAGAAAGGATAAAATCGTAACTTTACCTTATCTAAAAAGTCAAAGAGTCAATAAAAGGGATGTCGTTTCATAAACATAAACATTAGGGCTATTCTTTGAATAACCCAAACGGTCCTTCTGAACGGAAGGTTGTACTCCGAACTCCGAACTCCGAACTCCGAAGTTGTTCTTCGATTCGATTCTCTCTGAAAATCAAAATTCGAAGCTCTGCGATAATGGAGGCCACGGGTACCAACATAAACAGTCGCGATAGTGTCGAGATTTTCAATCTCTTCGTGAGGTTGTTAGATGGCAAAACCCTAGCTCTGAAATTGACGTCCCCTTCTGTACACGGCCATGCCCTCAAGCACCGTCTCTTCCAGACCACTGGAATTCCCCCAAACCACCAGCGTCTTGTAACTGGTATCCGCCAGATCGAGGATGATTCGGTTGTATCATGTTCCGGTGGAAGATTTCCCACTGTCTATCTTCTGCTCCGGCTCCTGGGAGGCAAGGGAGGGTTTGGATCGTTGTTGCGTGGGGCGGCGACGAAAGCGGGGCAAAAGAAGACGAATAATTTCGATGCTTGTAGGGATATGAGTGGGAGAAGGTTGAGGCATGTGAATGCTGAGAAGCGATTGGAGGAGTGGAAGGCGGAGGAGGAGGAGAGGAGGTTGGAGAAGGTGGCTGAGGAGTTTCTGAAGAAGAAAGCGAAGGTTGGGAAGAAGGGGGTTGGGGATTCTGCGGCTCAAAAGTACGTTGAGAAGTATCGGGAGGAGTCTGCTCGTTGTGTGGCTGAGGTGGAGGAATCTGTGAGAGATGCGGTGATGAATGGAAAAAGGAAGGCTGGTTCGATGGCCATTGGTGCAGATGCCAAAAAGTTGAAAATCTGGTTAGTTTCTTTCCTATTCCTCTTCTTTGATGTGTTAGATTATGATTTATTAGCTTGCAAATTGCTTTCAAGGTTATATTTCTGATCATAAAGAGTGAATAGGGGCATCCTCAATCACCAATCAGGCTGAAATCTTGTGGAGCTTTATCATTCTTCCTTTTATTTTTATACCATAGAAACTATATTTGTCTACTATCTACTTCCTTTCCACATTTTCTTGCCGTTCTGTCTTGGAATGGCTTCTTCAAATGATCAATCTATTAGACTATTCAATAGTGAGCGTTTCGTTCATATCGTTTCTTGTTGAACTTGCCTCCTCAAAAACCTTTTGAAATATCCCCATCCAGCCCAGCACTGTTCCTTCAGTTGTAGCTTCCTTCCTATTTACCCATGCTGAAAACTAGAAGCTCCCTTTATGAGTGAAGATTCATAATCTTCAACATACCCTAGTTTGATTATTGTAAAAGCTTTTATTAGAGCCTACTGGTGGAATATTTCGCATGAAAGAACTGGCAGAATTTTCCCAAATAAGGAAAATTTCGGATACATTAACTTTTTTGATGCTATAGATCATTATAGTTGTAACTAGATGTAAATGCTTCCCTCTCTCCCATCCTTATAGCTTTTCTTCCCTCGTTTCCAATTGAAAAGGGTTTTTGTAGATCCCCTTTTATGGGGTCCTCTCTTTGTAATTTTATACCCAGGTCAGCCTATCAATTAAGAAATGGAAGATGGATAACCAACAAAGAACATATTCACCACCGACTAGTTACAAAGGAGAATGCCTCATTTTATCCTTCATTCTGTGTGTTTTGTATTTCTAACGTTGAACATCCTTGTCATCTCTTTGCCCATTGTTCATATGCATCTCAATTTTGGATAAAAATGTTTGGAGCTTTTTGCTGGTCTGTGGCCTTGCCAAATGATATATTCAGCATCCTTGCCTTGGTCTTTATGGGTCATCCATTGCATGGTGCAAAAAAGACTGTATGTTAGCTTTCAATTCAACATACATACATATATAAATATATATGTTTATCTGTGTGTGTGTCTATATATATATATATATATATTTTTTTTTTTTTTGGGGGGGGGGGGGGTGCCTTTGGTGTGAAAGGAACTCAAGATATTGTAGGGATGTTTTCTCAACCCTCAACAGTTTTTTGGATTTTTTAAAATTTTTTTTATTGGTGTAAGCATAAACACCCCTTTAACTATTATAGTTTTTCCTTTTTGATTTCCAATTGGTGTTGGGAGCCTTTGAACTCCTTTTATTTCATTTATCAATAAAATATATTTCTCATCTAGAAAAGAACATATTGTTCACCATAAACCACCAAGAGAATCTGCCAGAAACTTCACCGAGAGCTCTAAAAGAATATCAAAACAACAAAAAAATTTCTTGATGGACCTTTGAAACTTAACTGGATAAATGGCCTCTATTGCAAAACTGTCCAACTGAAATATAAATTTGAAATAGTTGTGATCTTTAAAAAGATTCCTAAAGTAACATCTCTCTCTTCTATTTGTCAAAGATTTGCAAATTGAGATTTTTCTTTGTATGAATGGGAAAGAGATTAAAAAATGAGATTAGCAAGTTAAGAAGTTTCCTAGAAAATTTTGTTTGGGGTTCTCAAACGTTTTCTAGAGAGTGTAAACTTATATTAAAACTACATCTTTTCTTGTTTTACATGGACTAAACTGTCTCCTCCTTTTTGTAATTTTAGCCTATCGATCCTGTTAACACACTGGTGGTGTTTTTTGTAATTAACTTCAGATAGGGTTTTTTTAGTTCTATTTTATCAACCAATGGAATGGTTTATGTTTCCTAATATATACATATATATATATATATATAGAAAACTGAAAATTGAAAAAAAAAATTAAAGATATTGTAACATTAACATCACTTTCTTCTGTTGGTCAACTATTGAAGAATTATTTATAACCTGGAGATTGCTTATTAGCTTTCTGTGATTAATTATTTGTCTGCTAGGATGGGCAAGAGGAAAATGGGTGAAAGTGACAGCGATGATTCGGATGAGGACGACACTGAAAATGAAGAGGAAAGTGAGAAATCAGTCATCTTGAATGTTGGTCGATCTGATTTAAATAAGGACACTGAAGGGAGTTCAGACTCTGTTAACTTTGGTAAAAGTGGGGATGGTTCGGGTGGATCCTCATGTGAAAGTGGTTCTGAGGAAGAAAAGGACATGGCAGTGCAGGAAACCATGGAATTAGTTGGAAGCTCTAGTGAAAAAACTCTTCAATCTGAGCAGGTTGTCGTGGTTGAAATGAATGATCAGACTACTCAGAGTGCAGTTGTACCTTGTTCGGAGGCTGTTGCTGTTTCTGCCCATCAAGAAGACGAGGCTGCAAAACAGGATGCTCGTGAGGTTGAAATTGCCAACTCCAAAAACGTATCTGCTAATCATCAAGATATCACAGATCCAAATAATGGTGAAATTATTGAAGATTTGTCCACGGGTCCTGAACCAAATGGCCCTCCAGAATCTAAGTTGAGTGACCACGAGGAAACAACTGTAATTGCAAGCAGTTCAGAAGCATCTCTGAATTTTGATGATTTTAGTTCTGCCGCTGAAATGGAGGTACGTTCAAGAATTCCAATGATTATTTTTCTTATGCACAAGGACTTTAATGTCAAATCTTCATTCTCATTATTGCATCATTAAAAAGTTCTCTAAAAAAGGCCATAAAATCTATATTCTGAACTTCTGGTTGTTATTTGTTGCAAATATATAATCTTGTGTATGACACGACAATACCTTCACACATAGGTAAATTCAGAAAATATCAGGGGAGGCCAAAAGTTTACGTTCTAACATTATATATTCACAAGTGTCCAATTGCAAAAGTTGGAAGGGGGCAAACTAGCGGAAATTTATAAAATCATACTATGGCAAATTTTGTCCACGTTCTAGGGAGATGGATTGATGATTAGTTATTCACTGTTTCTTGTTTACTGGGGTAAGAATGTGTATTATGCTTGCTTATCATAATCGTTACTTAAATACGCCCCAACTTTTGAACTCAGAGGGACTTGTAACTAGTGATCATTGTTTGTTCATGTTAAACATTATATTAGTGAGTGAAACTCGGGGGTCATACTTTCTAATCTTTGTTCAAGTGCATGATTCTCTTGGGATTGTACTATTTTAAGTTTTTTTTGGCTCTTCGTTTTGTTTCCTTGTATTTTTAGCTCATATTATTACCCTTTATGATCCAGGTTCTTGGTTTGGAAAGGCTAAAGTCCGAACTGCAAGCACGTGGCTTGAAGTGTGGAGGTACTTTGCAAGAGAGGGCAGCCAGGCTTTTCTTGCTCAAGTCTACCCCTTTGGACAAGCTTCCAAAGAAGCTTCTTGCCAGAAAGTGAAATGCAACTTTTTACCATTGTAGCCACTTTGACTTCCCTCCATAAACTTGTAATGAAGTTAGGATGATCACATTGTATTTTCTTTTCAATCTTTGTACCAATAGTGAAGTAGTCATTAGTTTGTGTGTGTGTGTATCCTTGCACTTTTGATAGTTATAATAAACTAAAATGACGTACTTTTCTTTTTTTTCTGTTTTTGTATTGGAGTTATTAATGGGAAATTGTAAATATTTGTATAAATGATCAGTGGTTGCTATATAGAACTTTTATTTGTGTTAGAGATTGTTGTATGCTTAACTATGTATTGTTTAGAAGTTATTGACGAAGGCCGTAGTGAGTATCCCATTTTGTTCTTATGGGCGGTAGTGTTTAGTGTCAAATTTGTATTGGATGCATCCGTATTTATATATCATTATGATGTGAGATGCAAAAGAATCGTTCTATTTTTAGTTTACTGGCAATTGACTTCAAAATTTTAGACTTTAGTTCAGCTCATGTTTCTTCATGATCTCCATAATTTATAATATAACTCAGATTTAGGGATGGTATTTTGGATATTTTAGAAATATTATGAGTTCCAGAAAAAGTGGTAGAAAAATACTCAACTTTTCTTTTAATGAAATTTGAACGTCAATTTAAGTCACAAACTACCACTTTTAAGTAAAAAATAA

mRNA sequence

AAATAAGAGATTGAAGAGCAAAAGAAAGGATAAAATCGTAACTTTACCTTATCTAAAAAGTCAAAGAGTCAATAAAAGGGATGTCGTTTCATAAACATAAACATTAGGGCTATTCTTTGAATAACCCAAACGGTCCTTCTGAACGGAAGGTTGTACTCCGAACTCCGAACTCCGAACTCCGAAGTTGTTCTTCGATTCGATTCTCTCTGAAAATCAAAATTCGAAGCTCTGCGATAATGGAGGCCACGGGTACCAACATAAACAGTCGCGATAGTGTCGAGATTTTCAATCTCTTCGTGAGGTTGTTAGATGGCAAAACCCTAGCTCTGAAATTGACGTCCCCTTCTGTACACGGCCATGCCCTCAAGCACCGTCTCTTCCAGACCACTGGAATTCCCCCAAACCACCAGCGTCTTGTAACTGGTATCCGCCAGATCGAGGATGATTCGGTTGTATCATGTTCCGGTGGAAGATTTCCCACTGTCTATCTTCTGCTCCGGCTCCTGGGAGGCAAGGGAGGGTTTGGATCGTTGTTGCGTGGGGCGGCGACGAAAGCGGGGCAAAAGAAGACGAATAATTTCGATGCTTGTAGGGATATGAGTGGGAGAAGGTTGAGGCATGTGAATGCTGAGAAGCGATTGGAGGAGTGGAAGGCGGAGGAGGAGGAGAGGAGGTTGGAGAAGGTGGCTGAGGAGTTTCTGAAGAAGAAAGCGAAGGTTGGGAAGAAGGGGGTTGGGGATTCTGCGGCTCAAAAGTACGTTGAGAAGTATCGGGAGGAGTCTGCTCGTTGTGTGGCTGAGGTGGAGGAATCTGTGAGAGATGCGGTGATGAATGGAAAAAGGAAGGCTGGTTCGATGGCCATTGGTGCAGATGCCAAAAAGTTGAAAATCTGGATGGGCAAGAGGAAAATGGGTGAAAGTGACAGCGATGATTCGGATGAGGACGACACTGAAAATGAAGAGGAAAGTGAGAAATCAGTCATCTTGAATGTTGGTCGATCTGATTTAAATAAGGACACTGAAGGGAGTTCAGACTCTGTTAACTTTGGTAAAAGTGGGGATGGTTCGGGTGGATCCTCATGTGAAAGTGGTTCTGAGGAAGAAAAGGACATGGCAGTGCAGGAAACCATGGAATTAGTTGGAAGCTCTAGTGAAAAAACTCTTCAATCTGAGCAGGTTGTCGTGGTTGAAATGAATGATCAGACTACTCAGAGTGCAGTTGTACCTTGTTCGGAGGCTGTTGCTGTTTCTGCCCATCAAGAAGACGAGGCTGCAAAACAGGATGCTCGTGAGGTTGAAATTGCCAACTCCAAAAACGTATCTGCTAATCATCAAGATATCACAGATCCAAATAATGGTGAAATTATTGAAGATTTGTCCACGGGTCCTGAACCAAATGGCCCTCCAGAATCTAAGTTGAGTGACCACGAGGAAACAACTGTAATTGCAAGCAGTTCAGAAGCATCTCTGAATTTTGATGATTTTAGTTCTGCCGCTGAAATGGAGGTTCTTGGTTTGGAAAGGCTAAAGTCCGAACTGCAAGCACGTGGCTTGAAGTGTGGAGGTACTTTGCAAGAGAGGGCAGCCAGGCTTTTCTTGCTCAAGTCTACCCCTTTGGACAAGCTTCCAAAGAAGCTTCTTGCCAGAAAGTGAAATGCAACTTTTTACCATTGTAGCCACTTTGACTTCCCTCCATAAACTTGTAATGAAGTTAGGATGATCACATTGTATTTTCTTTTCAATCTTTGTACCAATAGTGAAGTAGTCATTAGTTTGTGTGTGTGTGTATCCTTGCACTTTTGATAGTTATAATAAACTAAAATGACGTACTTTTCTTTTTTTTCTGTTTTTGTATTGGAGTTATTAATGGGAAATTGTAAATATTTGTATAAATGATCAGTGGTTGCTATATAGAACTTTTATTTGTGTTAGAGATTGTTGTATGCTTAACTATGTATTGTTTAGAAGTTATTGACGAAGGCCGTAGTGAGTATCCCATTTTGTTCTTATGGGCGGTAGTGTTTAGTGTCAAATTTGTATTGGATGCATCCGTATTTATATATCATTATGATGTGAGATGCAAAAGAATCGTTCTATTTTTAGTTTACTGGCAATTGACTTCAAAATTTTAGACTTTAGTTCAGCTCATGTTTCTTCATGATCTCCATAATTTATAATATAACTCAGATTTAGGGATGGTATTTTGGATATTTTAGAAATATTATGAGTTCCAGAAAAAGTGGTAGAAAAATACTCAACTTTTCTTTTAATGAAATTTGAACGTCAATTTAAGTCACAAACTACCACTTTTAAGTAAAAAATAA

Coding sequence (CDS)

ATGGAGGCCACGGGTACCAACATAAACAGTCGCGATAGTGTCGAGATTTTCAATCTCTTCGTGAGGTTGTTAGATGGCAAAACCCTAGCTCTGAAATTGACGTCCCCTTCTGTACACGGCCATGCCCTCAAGCACCGTCTCTTCCAGACCACTGGAATTCCCCCAAACCACCAGCGTCTTGTAACTGGTATCCGCCAGATCGAGGATGATTCGGTTGTATCATGTTCCGGTGGAAGATTTCCCACTGTCTATCTTCTGCTCCGGCTCCTGGGAGGCAAGGGAGGGTTTGGATCGTTGTTGCGTGGGGCGGCGACGAAAGCGGGGCAAAAGAAGACGAATAATTTCGATGCTTGTAGGGATATGAGTGGGAGAAGGTTGAGGCATGTGAATGCTGAGAAGCGATTGGAGGAGTGGAAGGCGGAGGAGGAGGAGAGGAGGTTGGAGAAGGTGGCTGAGGAGTTTCTGAAGAAGAAAGCGAAGGTTGGGAAGAAGGGGGTTGGGGATTCTGCGGCTCAAAAGTACGTTGAGAAGTATCGGGAGGAGTCTGCTCGTTGTGTGGCTGAGGTGGAGGAATCTGTGAGAGATGCGGTGATGAATGGAAAAAGGAAGGCTGGTTCGATGGCCATTGGTGCAGATGCCAAAAAGTTGAAAATCTGGATGGGCAAGAGGAAAATGGGTGAAAGTGACAGCGATGATTCGGATGAGGACGACACTGAAAATGAAGAGGAAAGTGAGAAATCAGTCATCTTGAATGTTGGTCGATCTGATTTAAATAAGGACACTGAAGGGAGTTCAGACTCTGTTAACTTTGGTAAAAGTGGGGATGGTTCGGGTGGATCCTCATGTGAAAGTGGTTCTGAGGAAGAAAAGGACATGGCAGTGCAGGAAACCATGGAATTAGTTGGAAGCTCTAGTGAAAAAACTCTTCAATCTGAGCAGGTTGTCGTGGTTGAAATGAATGATCAGACTACTCAGAGTGCAGTTGTACCTTGTTCGGAGGCTGTTGCTGTTTCTGCCCATCAAGAAGACGAGGCTGCAAAACAGGATGCTCGTGAGGTTGAAATTGCCAACTCCAAAAACGTATCTGCTAATCATCAAGATATCACAGATCCAAATAATGGTGAAATTATTGAAGATTTGTCCACGGGTCCTGAACCAAATGGCCCTCCAGAATCTAAGTTGAGTGACCACGAGGAAACAACTGTAATTGCAAGCAGTTCAGAAGCATCTCTGAATTTTGATGATTTTAGTTCTGCCGCTGAAATGGAGGTTCTTGGTTTGGAAAGGCTAAAGTCCGAACTGCAAGCACGTGGCTTGAAGTGTGGAGGTACTTTGCAAGAGAGGGCAGCCAGGCTTTTCTTGCTCAAGTCTACCCCTTTGGACAAGCTTCCAAAGAAGCTTCTTGCCAGAAAGTGA

Protein sequence

MEATGTNINSRDSVEIFNLFVRLLDGKTLALKLTSPSVHGHALKHRLFQTTGIPPNHQRLVTGIRQIEDDSVVSCSGGRFPTVYLLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWKAEEEERRLEKVAEEFLKKKAKVGKKGVGDSAAQKYVEKYREESARCVAEVEESVRDAVMNGKRKAGSMAIGADAKKLKIWMGKRKMGESDSDDSDEDDTENEEESEKSVILNVGRSDLNKDTEGSSDSVNFGKSGDGSGGSSCESGSEEEKDMAVQETMELVGSSSEKTLQSEQVVVVEMNDQTTQSAVVPCSEAVAVSAHQEDEAAKQDAREVEIANSKNVSANHQDITDPNNGEIIEDLSTGPEPNGPPESKLSDHEETTVIASSSEASLNFDDFSSAAEMEVLGLERLKSELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK

Homology

[Close]

BLAST of Clc06G01260 vs. NCBI nr
Match: XP_038875299.1 (replication stress response regulator SDE2 [Benincasa hispida])

HSP 1 Score: 797.0 bits (2057), Expect = 9.0e-227
Identity = 435/471 (92.36%), Postives = 450/471 (95.54%), Query Frame = 0


Query: 1   MEATGTNINSRDSVEIFNLFVRLLDGKTLALKLTSPSVHGHALKHRLFQTTGIPPNHQRL 60
           MEATGT I+ R++VEIFNLFVRLLDGKTLALKLTSPSVHGHALKHRLFQ+TGIPPNHQRL
Sbjct: 1   MEATGTAISRRENVEIFNLFVRLLDGKTLALKLTSPSVHGHALKHRLFQSTGIPPNHQRL 60

Query: 61  VTGIRQIEDDSVVSCSGGRFPTVYLLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRD 120
           VTGIRQIE+DSVVSCSGGRFPTV+LLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRD
Sbjct: 61  VTGIRQIEEDSVVSCSGGRFPTVHLLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRD 120

Query: 121 MSGRRLRHVNAEKRLEEWKAEEEERRLEKVAEEFLKKKAKVGKKGVGDSAAQKYVEKYRE 180
           MSGRRLRHVNAEKRLEEWKAEEEERRLEKVAEEFLKKKAKVGKKGVGDSAAQKYVEKYRE
Sbjct: 121 MSGRRLRHVNAEKRLEEWKAEEEERRLEKVAEEFLKKKAKVGKKGVGDSAAQKYVEKYRE 180

Query: 181 ESARCVAEVEESVRDAVMNGKRKAGSMAIGADAKKLKIWMGKRKMGESDSDDSDEDDTEN 240
           ESARCVAEVEESVRDAVM GKRKAG MA GADAKKLKIWMGKRKM ESDSDDSDEDDTEN
Sbjct: 181 ESARCVAEVEESVRDAVMKGKRKAGLMANGADAKKLKIWMGKRKMAESDSDDSDEDDTEN 240

Query: 241 EEESEKSVILNVGRSDLNKDTEGSSDSVNFGKSGDGSGGSSCESGSEEEKDMAVQETMEL 300
           EE SEKSVILNVG+SDL KDTEGSSDSVNFGKSG+GSGGSSCESGSEEEKD+AV+ETMEL
Sbjct: 241 EEGSEKSVILNVGQSDL-KDTEGSSDSVNFGKSGNGSGGSSCESGSEEEKDVAVRETMEL 300

Query: 301 VGSSSEKTLQSEQVVVVEMNDQTTQSAVVPCSEAVAVSAHQEDEAAKQDAREVEIANSKN 360
           VGSSSEK LQSE+V +VEMNDQTTQSAVVPCSE VA SAHQEDE  KQDAREVEIANS+N
Sbjct: 301 VGSSSEKALQSEEVDMVEMNDQTTQSAVVPCSEGVAGSAHQEDEVVKQDAREVEIANSEN 360

Query: 361 VSANHQDITDPNNGEIIEDLSTGPEPNGPPESKLSDHEETTVIASSSEASLNFDDFSSAA 420
           VSANHQDI+DPNNGEIIEDLST PEPNGPP SKL DHE+TT  ASSSEA LNFDDFSSAA
Sbjct: 361 VSANHQDISDPNNGEIIEDLSTRPEPNGPPVSKLCDHEDTTATASSSEAPLNFDDFSSAA 420

Query: 421 EMEVLGLERLKSELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK 472
           EMEVLGLERLKSELQ RGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK
Sbjct: 421 EMEVLGLERLKSELQVRGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK 470

[Close]

BLAST of Clc06G01260 vs. NCBI nr
Match: XP_004140590.1 (replication stress response regulator SDE2 [Cucumis sativus] >KGN46346.1 hypothetical protein Csa_005291 [Cucumis sativus])

HSP 1 Score: 762.7 bits (1968), Expect = 1.9e-216
Identity = 417/467 (89.29%), Postives = 435/467 (93.15%), Query Frame = 0


Query: 8   INSRDSVEIFNLFVRLLDGKTLALKLTSPSVHGHALKHRLFQTTGIPPNHQRLVTGIRQI 67
           + +R++VEIFNLFVRLLDGKTLALKLTSP V GHALKHRLFQTTGIPPNHQRLVTG RQI
Sbjct: 1   METRENVEIFNLFVRLLDGKTLALKLTSPYVDGHALKHRLFQTTGIPPNHQRLVTGSRQI 60

Query: 68  EDDSVVSCSG---GRFPTVYLLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGR 127
           E+DSV+SCSG   GRFPTV+LLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGR
Sbjct: 61  ENDSVLSCSGDPSGRFPTVHLLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGR 120

Query: 128 RLRHVNAEKRLEEWKAEEEERRLEKVAEEFLKKKAKVGKKGVGDSAAQKYVEKYREESAR 187
           RLRHVNAEKRLEEWKAEEEERRLEKVAEEFLKKKAKVGKKGVGDSAAQKYVEKYREESAR
Sbjct: 121 RLRHVNAEKRLEEWKAEEEERRLEKVAEEFLKKKAKVGKKGVGDSAAQKYVEKYREESAR 180

Query: 188 CVAEVEESVRDAVMNGKRKAGSMAIGADAKKLKIWMGKRKMGESDSDDSDEDDTENEEES 247
           CVAEVEESVRDAVM GKRKAG MA GADAKKLKIWMGKRKMGESDSDDSDEDD ENEEES
Sbjct: 181 CVAEVEESVRDAVMKGKRKAGLMANGADAKKLKIWMGKRKMGESDSDDSDEDDAENEEES 240

Query: 248 EKSVILNVGRSDLNKDTEGSSDSVNFGKSGDGSGGSSCESGSEEEKDMAVQETMELVGSS 307
           EKSVILNVGRSDLNKD EGSSDSVN+GK+GDGSGGSSCESGSEEEKDMA QETMELVGSS
Sbjct: 241 EKSVILNVGRSDLNKDAEGSSDSVNYGKAGDGSGGSSCESGSEEEKDMAAQETMELVGSS 300

Query: 308 SEKTLQSEQVVVVEMNDQTTQSAVVPCSEAVAVSAHQEDEAAKQDAREVEIANSKNVSAN 367
           SEKTLQSE+V  VEMNDQTTQSAV+ C EAVA+SAHQEDE  KQDA EVEI NS+NVSAN
Sbjct: 301 SEKTLQSERVDAVEMNDQTTQSAVLSCPEAVAISAHQEDEVVKQDALEVEIVNSENVSAN 360

Query: 368 HQDITDPNNGEIIEDLSTGPEPNGPPESKLSDHEETTVIASSSEASLNFDDFSSAAEMEV 427
           HQD ++PN+GEIIEDLST PEPNG P SKLSDH+ETT   S+ E  LNFDDFSSA EMEV
Sbjct: 361 HQDTSNPNSGEIIEDLSTRPEPNGSPVSKLSDHDETTATVSNPEIPLNFDDFSSATEMEV 420

Query: 428 LGLERLKSELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK 472
           LGLERLKSELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK
Sbjct: 421 LGLERLKSELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK 467

[Close]

BLAST of Clc06G01260 vs. NCBI nr
Match: XP_008460000.1 (PREDICTED: protein SDE2 homolog [Cucumis melo])

HSP 1 Score: 748.4 bits (1931), Expect = 3.7e-212
Identity = 414/467 (88.65%), Postives = 437/467 (93.58%), Query Frame = 0


Query: 8   INSRDSVEIFNLFVRLLDGKTLALKLTSPSVHGHALKHRLFQTTGIPPNHQRLVTGIRQI 67
           +++R++VEIFNLFVRLLDGKTLALKLTSPSV GHALKHRLFQTTGIPPNHQRLV+GIRQI
Sbjct: 1   MDTRENVEIFNLFVRLLDGKTLALKLTSPSVDGHALKHRLFQTTGIPPNHQRLVSGIRQI 60

Query: 68  EDDSVVSCSG---GRFPTVYLLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGR 127
           E+DSV+SCSG   GRFPTV+LLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGR
Sbjct: 61  ENDSVLSCSGDPSGRFPTVHLLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGR 120

Query: 128 RLRHVNAEKRLEEWKAEEEERRLEKVAEEFLKKKAKVGKKGVGDSAAQKYVEKYREESAR 187
           RLRHVNAEKRLEEWKAEEEERRLEK+AEEFLKKKAKVGKKGVGDSAAQKYVEKYREESAR
Sbjct: 121 RLRHVNAEKRLEEWKAEEEERRLEKMAEEFLKKKAKVGKKGVGDSAAQKYVEKYREESAR 180

Query: 188 CVAEVEESVRDAVMNGKRKAGSMAIGADAKKLKIWMGKRKMGESDSDDSDEDDTENEEES 247
           CVAEVEESVRDAVM GKRKAG MA GADAKKLKIWMGKRK+GESDSDDSDED+ ENEEES
Sbjct: 181 CVAEVEESVRDAVMKGKRKAGLMANGADAKKLKIWMGKRKVGESDSDDSDEDEAENEEES 240

Query: 248 EKSVILNVGRSDLNKDTEGSSDSVNFGKSGDGSGGSSCESGSEEEKDMAVQETMELVGSS 307
           EKSVILN GRSDLNKD EGSSDSVN+GK+GDGSGGSSCESGSEEEKDMA QETMELVGSS
Sbjct: 241 EKSVILNDGRSDLNKDAEGSSDSVNYGKAGDGSGGSSCESGSEEEKDMAAQETMELVGSS 300

Query: 308 SEKTLQSEQVVVVEMNDQTTQSAVVPCSEAVAVSAHQEDEAAKQDAREVEIANSKNVSAN 367
           SEKT+QSE+V VVE NDQTTQSAV+PCSEAVAVS HQEDE  KQD    EIAN +NVSAN
Sbjct: 301 SEKTIQSERVDVVETNDQTTQSAVLPCSEAVAVSPHQEDEIVKQD----EIAN-ENVSAN 360

Query: 368 HQDITDPNNGEIIEDLSTGPEPNGPPESKLSDHEETTVIASSSEASLNFDDFSSAAEMEV 427
           HQDI++PN+ EIIEDLST PEPNGPP SKLSDH+ETT   S+SE  LNFD FSSAAEMEV
Sbjct: 361 HQDISNPNSCEIIEDLSTLPEPNGPPVSKLSDHDETTATVSNSEIPLNFDGFSSAAEMEV 420

Query: 428 LGLERLKSELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK 472
           LGLERLKSELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK
Sbjct: 421 LGLERLKSELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK 462

[Close]

BLAST of Clc06G01260 vs. NCBI nr
Match: KAA0039912.1 (protein SDE2-like protein [Cucumis melo var. makuwa] >TYK24588.1 protein SDE2-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 745.7 bits (1924), Expect = 2.4e-211
Identity = 413/467 (88.44%), Postives = 435/467 (93.15%), Query Frame = 0


Query: 8   INSRDSVEIFNLFVRLLDGKTLALKLTSPSVHGHALKHRLFQTTGIPPNHQRLVTGIRQI 67
           +++R++VEIFNLFVRLLDGKTLALKLTSPSV GHALKHRLFQTTGIPPNHQRLV+GIRQI
Sbjct: 1   MDTRENVEIFNLFVRLLDGKTLALKLTSPSVDGHALKHRLFQTTGIPPNHQRLVSGIRQI 60

Query: 68  EDDSVVSCSG---GRFPTVYLLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGR 127
           E+DSV+SCSG   GRFPTV+LLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGR
Sbjct: 61  ENDSVLSCSGDPSGRFPTVHLLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGR 120

Query: 128 RLRHVNAEKRLEEWKAEEEERRLEKVAEEFLKKKAKVGKKGVGDSAAQKYVEKYREESAR 187
           RLRHVNAEKRLEEWKAEEEERRLEK+AEEFLKKKAKVGKKGVGDSAAQKYVEKYREESAR
Sbjct: 121 RLRHVNAEKRLEEWKAEEEERRLEKMAEEFLKKKAKVGKKGVGDSAAQKYVEKYREESAR 180

Query: 188 CVAEVEESVRDAVMNGKRKAGSMAIGADAKKLKIWMGKRKMGESDSDDSDEDDTENEEES 247
           CVAEVEESVRDAVM GKRKAG MA GADAKKLKIWMGKRK+GESDSDDSDED+ ENEEES
Sbjct: 181 CVAEVEESVRDAVMKGKRKAGLMANGADAKKLKIWMGKRKVGESDSDDSDEDEAENEEES 240

Query: 248 EKSVILNVGRSDLNKDTEGSSDSVNFGKSGDGSGGSSCESGSEEEKDMAVQETMELVGSS 307
           EKSVILN GRSDLNKD EGSSDSVN+GK+GDGSGGSSCESGSEEEKDMA  ETMELVGSS
Sbjct: 241 EKSVILNDGRSDLNKDAEGSSDSVNYGKAGDGSGGSSCESGSEEEKDMAALETMELVGSS 300

Query: 308 SEKTLQSEQVVVVEMNDQTTQSAVVPCSEAVAVSAHQEDEAAKQDAREVEIANSKNVSAN 367
           SEKT+QSEQV VVE NDQTTQSAV+PCSEAVAVS HQEDE  KQD    EIAN +NVSAN
Sbjct: 301 SEKTIQSEQVDVVETNDQTTQSAVLPCSEAVAVSPHQEDEIVKQD----EIAN-ENVSAN 360

Query: 368 HQDITDPNNGEIIEDLSTGPEPNGPPESKLSDHEETTVIASSSEASLNFDDFSSAAEMEV 427
           HQDI++PN+ EIIEDLST PEPNGPP SKLSDH+ETT   S+SE  LNFD FSSAAEMEV
Sbjct: 361 HQDISNPNSCEIIEDLSTLPEPNGPPVSKLSDHDETTATVSNSEIPLNFDGFSSAAEMEV 420

Query: 428 LGLERLKSELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK 472
           LGLERLKSELQARGLKCGGTLQERA RLFLLKSTPLDKLPKKLLARK
Sbjct: 421 LGLERLKSELQARGLKCGGTLQERAVRLFLLKSTPLDKLPKKLLARK 462

[Close]

BLAST of Clc06G01260 vs. NCBI nr
Match: XP_022929896.1 (protein SDE2 homolog [Cucurbita moschata])

HSP 1 Score: 711.4 bits (1835), Expect = 5.0e-201
Identity = 398/475 (83.79%), Postives = 425/475 (89.47%), Query Frame = 0


Query: 1   MEATGTNINSRDSVEIFNLFVRLLDGKTLALKLTSPSVHGHALKHRLFQTTGIPPNHQRL 60
           MEATG +I+ R +VEIFNLFVRLLDGKTLALKL SPSV+GHALKH L+++TGIPPNHQRL
Sbjct: 1   MEATGADISRRQNVEIFNLFVRLLDGKTLALKLNSPSVYGHALKHSLYESTGIPPNHQRL 60

Query: 61  VTGIRQIEDDSVVSCSG---GRFPTVYLLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDA 120
           VTG+R IEDDSVVSCSG   G+FPT++LLLRL+GGKGGFGSLLRGAATKAGQKKTNNFDA
Sbjct: 61  VTGVRPIEDDSVVSCSGEPSGKFPTIHLLLRLVGGKGGFGSLLRGAATKAGQKKTNNFDA 120

Query: 121 CRDMSGRRLRHVNAEKRLEEWKAEEEERRLEKVAEEFLKKKAKVGKKGVGDSAAQKYVEK 180
           CRDM GRRLRHVNAEKRLEEWKAEEEERRLE VAEEFLKKK KVGKKGVGDSAAQKYVEK
Sbjct: 121 CRDMRGRRLRHVNAEKRLEEWKAEEEERRLETVAEEFLKKKGKVGKKGVGDSAAQKYVEK 180

Query: 181 YREESARCVAEVEESVRDAVMNGKRKAGSMAIGADAKKLKIWMGKRKMGESDSDDSDEDD 240
           YREESARCVAEV ESVRDAVM GKRK G MA G DAKKLKIWMGKRKMGESDSDDSDEDD
Sbjct: 181 YREESARCVAEVVESVRDAVMKGKRKGGLMANGGDAKKLKIWMGKRKMGESDSDDSDEDD 240

Query: 241 TENEEESEKSVILNVG-RSDLNKDTEGSSDSVNFGKSGDGSGGSSCESGSEEEKDMAVQE 300
           TENE ESEKSVILNVG +SDLNKDTEGSSDSVNFGK G  SGGSSCESGSEEEKD+A+QE
Sbjct: 241 TENEGESEKSVILNVGCQSDLNKDTEGSSDSVNFGKRGVCSGGSSCESGSEEEKDLAMQE 300

Query: 301 TMELVGSSSEKTLQSEQVVVVEMNDQTTQSAVVPCSEAVAVSAHQEDEAAKQDAREVEIA 360
           T+ELVGSS+EK    EQV VVEMN Q T+ A+V CSEAVAVSAHQEDE  KQDA EVEIA
Sbjct: 301 TLELVGSSTEKAFH-EQVDVVEMNYQNTRGAIVSCSEAVAVSAHQEDEVVKQDAHEVEIA 360

Query: 361 NSKNVSANHQDITDPNNGEIIEDLSTGPEPNGPPESKLSDHEETTVIASSSEASLNFDDF 420
           NS+NV+A  Q I+ P NG+IIEDLST PEPNG P SKLSDHEET    SSSE  LNF DF
Sbjct: 361 NSENVAAIPQHISHP-NGQIIEDLSTLPEPNGSPVSKLSDHEETNATTSSSETPLNFGDF 420

Query: 421 SSAAEMEVLGLERLKSELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK 472
           +SA+EMEV+GLERLK+ELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK
Sbjct: 421 NSASEMEVVGLERLKAELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK 473

[Close]

BLAST of Clc06G01260 vs. ExPASy Swiss-Prot
Match: Q7T293 (Replication stress response regulator SDE2 OS=Danio rerio OX=7955 GN=sde2 PE=2 SV=2)

HSP 1 Score: 101.7 bits (252), Expect = 2.4e-20
Identity = 126/427 (29.51%), Postives = 192/427 (44.96%), Query Frame = 0


Query: 88  RLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEW-------KA 147
           RL GGKGGFGS+LR  A  A  +KT N +ACRD+SGRRLR VN EK + EW       +A
Sbjct: 67  RLCGGKGGFGSMLR--ALGAQIEKTTNREACRDLSGRRLRDVNHEKEMAEWLKKQADREA 126

Query: 148 EEEERRLEKVAEEFLKKKAKVGKKGVGDSAAQKYVEKYREESARCVAEVEESVRDAVMNG 207
           E+E+RRLE++  +  + K               + +   E+      ++ E + D+V+ G
Sbjct: 127 EKEQRRLERIQRKLAEPK-------------HYFTDTNYEQQCH---DLSERLEDSVLKG 186

Query: 208 KRKAGSMAIGAD----------------AKKLKIWMGKRKMGESDSDDSDEDDTENEEES 267
            + + S  + AD                AKK   W G   + E  S     DD+++E   
Sbjct: 187 MQASSSGLVQADEGPSLKRANPTDSKKKAKKKCYWTGMAGLEEMASSSEGSDDSDSEVSP 246

Query: 268 EKS----------VILNVGRSDLNKDTEGSSDSVNFGKSGD----------GSGGSSCES 327
             S           +++  ++D  +    SS +       +              SS  S
Sbjct: 247 STSGASCSSGFPKPVVSAHKADPQEQPSSSSPAQRKHNQEELQKRDKEECTSEISSSSSS 306

Query: 328 GSEEEKDMAVQETMELVGSSSEKTLQSEQVVVVEMNDQTTQSAVVPCSEAVAVSAHQEDE 387
            +   + +  +ET E+  SSS    +  +V   EM  +   +A +  S + + + H E+E
Sbjct: 307 PAANNEKLNQEETNEISSSSSSPAPKPTEVNQQEMETEMECTAQISSSSS-SPAEHSEEE 366

Query: 388 AAKQDAREVEIANSKNVSANH-QDITDPNNGEIIEDLSTGPEPNGPPESKLSDHEETTVI 447
             +   R  ++A     +A   Q  T+ +  EI             P S +   EE + +
Sbjct: 367 VQQTAERVEKMAEEVQKTAEEVQKKTEESTAEI------------SPSSSIP--EEKSQV 426

Query: 448 ASSSEASLNFDDFSSAAEMEVLGLERLKSELQARGLKCGGTLQERAARLFLLKSTPLDKL 471
            S  E  L+    S   ++E LGLERLK EL  RG+KCGGTLQERAARLF +K    D++
Sbjct: 427 LSQVEDPLDLLSVSGPEQLEALGLERLKKELMERGMKCGGTLQERAARLFSVKGLTPDQI 460

[Close]

BLAST of Clc06G01260 vs. ExPASy Swiss-Prot
Match: Q07G43 (Replication stress response regulator SDE2 OS=Xenopus tropicalis OX=8364 GN=sde2 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.0e-19
Identity = 124/414 (29.95%), Postives = 193/414 (46.62%), Query Frame = 0


Query: 82  TVYLLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEW--- 141
           T  ++ RL GGKGGFGS+LR  A  A  +KT N +ACRD+SGRRLR VN EK + EW   
Sbjct: 61  TYSIVPRLCGGKGGFGSMLR--ALGAQIEKTTNREACRDLSGRRLRDVNHEKAMAEWIKK 120

Query: 142 ----KAEEEERRLEKVAEEFLKKKAKVGKKGVGDSAAQKYV----EKYREESARCVAEVE 201
               +AE+E+RRLE+     L++K    K    D    K      E+  E   + +    
Sbjct: 121 QADREAEKEQRRLER-----LQRKLAEPKHYFTDPEYHKQCHDMSERLEEAVIKGLQASS 180

Query: 202 ESVRDAVMNGKRKAGS---MAIGADAKKLKIWMGKRKMGESDSDDSDEDD-------TEN 261
            S+  A  +  RK       + G   KK   W G   +  S S DS  D        + +
Sbjct: 181 SSMASAESDDTRKRKKDMYSSKGTPGKKKCFWTGLEGLETSSSSDSASDSDLDESPCSSS 240

Query: 262 EEESEKSVILNVGRSDLNKDTEGSSDSVNFGKSGDGSGGSSCESGSEEEKDMAVQETMEL 321
              S+     N+     + +++ S + +  G S DGS     E  S  ++   + E    
Sbjct: 241 SSSSDSKYYENIKERLQSPESQSSPEELGQG-SSDGS-HQMLEGHSSSDRSHQMLEGQAS 300

Query: 322 VGSSSEKTLQSEQVVVVEMNDQTTQSAVVPCSEAVAVSAHQEDEAAKQDAREVEIA-NSK 381
              S +           +    +  + +V  S+++ V + Q  E+        + A N+ 
Sbjct: 301 CSGSDQMLEGPSSSAGAQWQSSSKGTELVQESQSIPVESEQNMESQNSSDESKQTAFNNS 360

Query: 382 NVSANHQDITDP-NNGEIIEDLSTGPEPNGP--PESKLSDHEETTVIASSSEASLNFDDF 441
            ++   +++T P + G+  +  + G  P  P  P SK    +E    +++  + ++   F
Sbjct: 361 GINVECENVTSPGSTGQDGQTPNDGVRPASPSIPISK----QELQQPSNAETSPIDLLAF 420

Query: 442 SSAAEMEVLGLERLKSELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLAR 471
            +AAE+E LGLE+LK EL A  LKCGGTLQERAARLF ++  P D++   L A+
Sbjct: 421 KTAAELEALGLEKLKLELGALALKCGGTLQERAARLFSVRGLPRDQIDPSLFAK 461

[Close]

BLAST of Clc06G01260 vs. ExPASy Swiss-Prot
Match: Q8K1J5 (Replication stress response regulator SDE2 OS=Mus musculus OX=10090 GN=Sde2 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.2e-16
Identity = 125/411 (30.41%), Postives = 184/411 (44.77%), Query Frame = 0


Query: 88  RLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWKAEEEERRL 147
           RL GGKGGFGS+LR  A  A  +KT N +ACRD+SGRRLR VN EK + EW  ++ ER  
Sbjct: 73  RLRGGKGGFGSMLR--ALGAQIEKTTNREACRDLSGRRLRDVNHEKAMAEWVKQQAEREA 132

Query: 148 EKVAEEFLKKKAKVGKKGVGDSAAQKYVEKYREESARCVAEVEESVRDAVMNGKRKAGSM 207
           EK      + + K+ +       A  +      +  R   E+ E + D+V+ G + A S 
Sbjct: 133 EKEQRRLERLQRKLAE------PAHCFTS---PDYQRQCHEMAERLEDSVLKGMQAASSK 192

Query: 208 AIGAD------------------AKKLK---IWMGKRKMGESD------SDDSDEDDTEN 267
            + A+                  AKK K    W+G   +  ++      S+DS EDD+E+
Sbjct: 193 MVSAEITETRKRPNKSKTDQETSAKKRKRKCFWLGMDGLEAAEGSSTGSSEDSSEDDSED 252

Query: 268 EE-ESEKSVILNVGRSDLNKDTEGSSDSVNFGKSGDGSGGSSCESGSEEEKDMAVQETME 327
               SE+S              E   D+V       GS  SS  SG+  E    +Q  + 
Sbjct: 253 APGTSEQSCCAR----------EDGIDAVEVAADRPGSPRSSA-SGTHSESPEKLQCPVT 312

Query: 328 LVGSSSEKTLQSEQVVVVEMNDQTTQSAVVPCSEAVAVSAHQEDEAAKQDAREVEIANSK 387
             G          Q ++     +  +++   C+E   V+  +E  A K+           
Sbjct: 313 EPG----------QGILENTGTEPGETSDKECNERKTVTDPEETPARKE--------TES 372

Query: 388 NVSANHQDITDPNNGEIIEDLSTGPEPNGPPESKLSDHEETTVIASSSEASLNFDDFSSA 447
           + +      T  + G+    + +G +    P + L  +      A   EA ++   FSSA
Sbjct: 373 HEATEKDQKTGMSGGDRAAMVLSGEDRKSVPAANLEGNNSGDT-ALGLEA-VDLSAFSSA 432

Query: 448 AEMEVLGLERLKSELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLAR 471
           AE+E LGLERLK EL   GLKCGGTLQERAARLF ++    + +   L A+
Sbjct: 433 AELESLGLERLKCELMVLGLKCGGTLQERAARLFSVRGLTKELIDPALFAK 441

[Close]

BLAST of Clc06G01260 vs. ExPASy Swiss-Prot
Match: Q6NRI5 (Replication stress response regulator SDE2 OS=Xenopus laevis OX=8355 GN=sde2 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.6e-16
Identity = 129/410 (31.46%), Postives = 179/410 (43.66%), Query Frame = 0


Query: 88  RLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEW-------KA 147
           RL GGKGGFGS+LR  A  A  +KT N +ACRD+SGRRLR VN EK + EW       +A
Sbjct: 67  RLCGGKGGFGSMLR--ALGAQIEKTTNREACRDLSGRRLRDVNHEKAMAEWTKKQADREA 126

Query: 148 EEEERRLEKVAEEFLKKKAKVGKKGVGDSAAQKYVEKYREESARCVAE-VEESVRDAVM- 207
           E+E+RRLE+     L++K    K    D    K      E     V + ++ S  D V  
Sbjct: 127 EKEQRRLER-----LQRKLAEPKHYFTDPEYHKQCHDMSERLEEAVIKGLQASSSDVVSA 186

Query: 208 ----NGKRKAGSMAI-GADAKKLKIWMGKRKMGESDSDDSDEDDTENEEESEKSVILNVG 267
                 KRK    A  G  +KK   W G   +  S S DS  D   +E     S      
Sbjct: 187 ESDDTRKRKKDMYASKGTSSKKKCFWTGLEGLEASSSSDSSSDSDLDESPCSSS------ 246

Query: 268 RSDLNKDTEGSSDSVNFGKSGDGSGGSSCESGSEEEKDMAVQETMELVGSSSEKTLQSEQ 327
                      S    + K   GS  SS  S   EE   A    M L G +S     SE 
Sbjct: 247 ---------SGSKHHEYIKERLGSPESSSSSDGLEEASSAGSHQM-LKGQTS----GSES 306

Query: 328 VVVVEMNDQTTQSAVVPCSEAVAVSAHQEDEAAKQDAREVEIANSKNVSANHQD------ 387
             ++E    +  S  VP  ++ +       E     A   +   + N+S   ++      
Sbjct: 307 DNILEGPSSSAGSLHVPQLQSSSKGTEHIQEPQTCPAESEQNTETPNISDGSEENPTTVT 366

Query: 388 -------ITDPNNGEIIEDLSTGPEPNGPPESKLSDHEETTVIASSSEASLNFDDFSSAA 447
                   +  N G+  + L  G +   P  + L    E    +++  +S++   + + A
Sbjct: 367 NSECKSVTSAANTGQNEQILDDGHKFASP--TLLEPKSELQQSSNTEPSSIDLVAYKTVA 426

Query: 448 EMEVLGLERLKSELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLAR 471
           E+E LGLE+LK EL A GLKCGGTLQERAARLF ++    D++   L A+
Sbjct: 427 ELEALGLEKLKLELVALGLKCGGTLQERAARLFSVRGLARDQIDPSLFAK 447

[Close]

BLAST of Clc06G01260 vs. ExPASy Swiss-Prot
Match: Q5BJN8 (Replication stress response regulator SDE2 OS=Rattus norvegicus OX=10116 GN=Sde2 PE=1 SV=2)

HSP 1 Score: 88.6 bits (218), Expect = 2.1e-16
Identity = 131/430 (30.47%), Postives = 183/430 (42.56%), Query Frame = 0


Query: 88  RLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWKAEEEERRL 147
           RL GGKGGFGS+LR  A  A  +KT N +ACRD+SGRRLR VN EK + EW  ++ ER  
Sbjct: 73  RLRGGKGGFGSMLR--ALGAQIEKTTNREACRDLSGRRLRDVNHEKAMAEWVKQQAEREA 132

Query: 148 EKVAEEFLKKKAKVGKKGVGDSAAQKYVEKYREESARCVA---------EVEESVRDAVM 207
           EK      + + K+                   E A C A         E+ E + D+V+
Sbjct: 133 EKEQRRLERLQRKLA------------------EPAHCFASPDYQRQCHEMAERLEDSVL 192

Query: 208 NGKRKAGSMAI------------------GADAKKLK-IWMGKRKMGESD------SDDS 267
            G + A S  +                  GA AKK +  W+G   +  ++      SDDS
Sbjct: 193 KGMQAASSKVVSAEVTETRKRPNRSKTDQGAGAKKKRCFWLGMEGLEAAEGSSTGSSDDS 252

Query: 268 DEDDTENEEESEKSVILNVGRSDLNKDTEGSSDSVNFGKSGDGSGGSSCESGSEEEKDMA 327
           ++DD E+   +        G S   +  E  SD         GS  SS  SG+  E    
Sbjct: 253 EDDDHEDAPGTS-------GPSCCAR--ENGSDGGEVAADSPGSVQSS-GSGTRSESPKE 312

Query: 328 VQETMELVGSSSEKTLQSE--QVVVVEMNDQTTQSAVVPCSEAVAVSAHQEDEAAKQDAR 387
           +Q  M   G    +   +E  +    E N++ T    V  +E     A +E E+ +   +
Sbjct: 313 LQNPMTEPGQGILENTGTEPGETSTREHNERKT----VTVTETEETPARKETESPEPTEK 372

Query: 388 EVEIANSKNVSANHQDITDPNNGEIIEDLSTGPEPNGPPESKLSDHEETTVIASSSEAS- 447
             E                   G I ED +            LS  +  ++ A++ E S 
Sbjct: 373 GQE------------------TGVIGEDRAA---------MALSGEDRKSIPAATPEGSN 432

Query: 448 ----------LNFDDFSSAAEMEVLGLERLKSELQARGLKCGGTLQERAARLFLLKSTPL 471
                     L+   FS AAE+E+LGLERLK  L A GLKCGGTLQERAARLF ++    
Sbjct: 433 SGDTALGVEALDLSAFSCAAELELLGLERLKCALMALGLKCGGTLQERAARLFSVRGLSK 441

[Close]

BLAST of Clc06G01260 vs. ExPASy TrEMBL
Match: A0A0A0KEZ6 (Ubiquitin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G087750 PE=3 SV=1)

HSP 1 Score: 762.7 bits (1968), Expect = 9.1e-217
Identity = 417/467 (89.29%), Postives = 435/467 (93.15%), Query Frame = 0


Query: 8   INSRDSVEIFNLFVRLLDGKTLALKLTSPSVHGHALKHRLFQTTGIPPNHQRLVTGIRQI 67
           + +R++VEIFNLFVRLLDGKTLALKLTSP V GHALKHRLFQTTGIPPNHQRLVTG RQI
Sbjct: 1   METRENVEIFNLFVRLLDGKTLALKLTSPYVDGHALKHRLFQTTGIPPNHQRLVTGSRQI 60

Query: 68  EDDSVVSCSG---GRFPTVYLLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGR 127
           E+DSV+SCSG   GRFPTV+LLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGR
Sbjct: 61  ENDSVLSCSGDPSGRFPTVHLLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGR 120

Query: 128 RLRHVNAEKRLEEWKAEEEERRLEKVAEEFLKKKAKVGKKGVGDSAAQKYVEKYREESAR 187
           RLRHVNAEKRLEEWKAEEEERRLEKVAEEFLKKKAKVGKKGVGDSAAQKYVEKYREESAR
Sbjct: 121 RLRHVNAEKRLEEWKAEEEERRLEKVAEEFLKKKAKVGKKGVGDSAAQKYVEKYREESAR 180

Query: 188 CVAEVEESVRDAVMNGKRKAGSMAIGADAKKLKIWMGKRKMGESDSDDSDEDDTENEEES 247
           CVAEVEESVRDAVM GKRKAG MA GADAKKLKIWMGKRKMGESDSDDSDEDD ENEEES
Sbjct: 181 CVAEVEESVRDAVMKGKRKAGLMANGADAKKLKIWMGKRKMGESDSDDSDEDDAENEEES 240

Query: 248 EKSVILNVGRSDLNKDTEGSSDSVNFGKSGDGSGGSSCESGSEEEKDMAVQETMELVGSS 307
           EKSVILNVGRSDLNKD EGSSDSVN+GK+GDGSGGSSCESGSEEEKDMA QETMELVGSS
Sbjct: 241 EKSVILNVGRSDLNKDAEGSSDSVNYGKAGDGSGGSSCESGSEEEKDMAAQETMELVGSS 300

Query: 308 SEKTLQSEQVVVVEMNDQTTQSAVVPCSEAVAVSAHQEDEAAKQDAREVEIANSKNVSAN 367
           SEKTLQSE+V  VEMNDQTTQSAV+ C EAVA+SAHQEDE  KQDA EVEI NS+NVSAN
Sbjct: 301 SEKTLQSERVDAVEMNDQTTQSAVLSCPEAVAISAHQEDEVVKQDALEVEIVNSENVSAN 360

Query: 368 HQDITDPNNGEIIEDLSTGPEPNGPPESKLSDHEETTVIASSSEASLNFDDFSSAAEMEV 427
           HQD ++PN+GEIIEDLST PEPNG P SKLSDH+ETT   S+ E  LNFDDFSSA EMEV
Sbjct: 361 HQDTSNPNSGEIIEDLSTRPEPNGSPVSKLSDHDETTATVSNPEIPLNFDDFSSATEMEV 420

Query: 428 LGLERLKSELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK 472
           LGLERLKSELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK
Sbjct: 421 LGLERLKSELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK 467

[Close]

BLAST of Clc06G01260 vs. ExPASy TrEMBL
Match: A0A1S3CBI3 (protein SDE2 homolog OS=Cucumis melo OX=3656 GN=LOC103498946 PE=3 SV=1)

HSP 1 Score: 748.4 bits (1931), Expect = 1.8e-212
Identity = 414/467 (88.65%), Postives = 437/467 (93.58%), Query Frame = 0


Query: 8   INSRDSVEIFNLFVRLLDGKTLALKLTSPSVHGHALKHRLFQTTGIPPNHQRLVTGIRQI 67
           +++R++VEIFNLFVRLLDGKTLALKLTSPSV GHALKHRLFQTTGIPPNHQRLV+GIRQI
Sbjct: 1   MDTRENVEIFNLFVRLLDGKTLALKLTSPSVDGHALKHRLFQTTGIPPNHQRLVSGIRQI 60

Query: 68  EDDSVVSCSG---GRFPTVYLLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGR 127
           E+DSV+SCSG   GRFPTV+LLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGR
Sbjct: 61  ENDSVLSCSGDPSGRFPTVHLLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGR 120

Query: 128 RLRHVNAEKRLEEWKAEEEERRLEKVAEEFLKKKAKVGKKGVGDSAAQKYVEKYREESAR 187
           RLRHVNAEKRLEEWKAEEEERRLEK+AEEFLKKKAKVGKKGVGDSAAQKYVEKYREESAR
Sbjct: 121 RLRHVNAEKRLEEWKAEEEERRLEKMAEEFLKKKAKVGKKGVGDSAAQKYVEKYREESAR 180

Query: 188 CVAEVEESVRDAVMNGKRKAGSMAIGADAKKLKIWMGKRKMGESDSDDSDEDDTENEEES 247
           CVAEVEESVRDAVM GKRKAG MA GADAKKLKIWMGKRK+GESDSDDSDED+ ENEEES
Sbjct: 181 CVAEVEESVRDAVMKGKRKAGLMANGADAKKLKIWMGKRKVGESDSDDSDEDEAENEEES 240

Query: 248 EKSVILNVGRSDLNKDTEGSSDSVNFGKSGDGSGGSSCESGSEEEKDMAVQETMELVGSS 307
           EKSVILN GRSDLNKD EGSSDSVN+GK+GDGSGGSSCESGSEEEKDMA QETMELVGSS
Sbjct: 241 EKSVILNDGRSDLNKDAEGSSDSVNYGKAGDGSGGSSCESGSEEEKDMAAQETMELVGSS 300

Query: 308 SEKTLQSEQVVVVEMNDQTTQSAVVPCSEAVAVSAHQEDEAAKQDAREVEIANSKNVSAN 367
           SEKT+QSE+V VVE NDQTTQSAV+PCSEAVAVS HQEDE  KQD    EIAN +NVSAN
Sbjct: 301 SEKTIQSERVDVVETNDQTTQSAVLPCSEAVAVSPHQEDEIVKQD----EIAN-ENVSAN 360

Query: 368 HQDITDPNNGEIIEDLSTGPEPNGPPESKLSDHEETTVIASSSEASLNFDDFSSAAEMEV 427
           HQDI++PN+ EIIEDLST PEPNGPP SKLSDH+ETT   S+SE  LNFD FSSAAEMEV
Sbjct: 361 HQDISNPNSCEIIEDLSTLPEPNGPPVSKLSDHDETTATVSNSEIPLNFDGFSSAAEMEV 420

Query: 428 LGLERLKSELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK 472
           LGLERLKSELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK
Sbjct: 421 LGLERLKSELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK 462

[Close]

BLAST of Clc06G01260 vs. ExPASy TrEMBL
Match: A0A5D3DLW6 (Protein SDE2-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001340 PE=3 SV=1)

HSP 1 Score: 745.7 bits (1924), Expect = 1.2e-211
Identity = 413/467 (88.44%), Postives = 435/467 (93.15%), Query Frame = 0


Query: 8   INSRDSVEIFNLFVRLLDGKTLALKLTSPSVHGHALKHRLFQTTGIPPNHQRLVTGIRQI 67
           +++R++VEIFNLFVRLLDGKTLALKLTSPSV GHALKHRLFQTTGIPPNHQRLV+GIRQI
Sbjct: 1   MDTRENVEIFNLFVRLLDGKTLALKLTSPSVDGHALKHRLFQTTGIPPNHQRLVSGIRQI 60

Query: 68  EDDSVVSCSG---GRFPTVYLLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGR 127
           E+DSV+SCSG   GRFPTV+LLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGR
Sbjct: 61  ENDSVLSCSGDPSGRFPTVHLLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGR 120

Query: 128 RLRHVNAEKRLEEWKAEEEERRLEKVAEEFLKKKAKVGKKGVGDSAAQKYVEKYREESAR 187
           RLRHVNAEKRLEEWKAEEEERRLEK+AEEFLKKKAKVGKKGVGDSAAQKYVEKYREESAR
Sbjct: 121 RLRHVNAEKRLEEWKAEEEERRLEKMAEEFLKKKAKVGKKGVGDSAAQKYVEKYREESAR 180

Query: 188 CVAEVEESVRDAVMNGKRKAGSMAIGADAKKLKIWMGKRKMGESDSDDSDEDDTENEEES 247
           CVAEVEESVRDAVM GKRKAG MA GADAKKLKIWMGKRK+GESDSDDSDED+ ENEEES
Sbjct: 181 CVAEVEESVRDAVMKGKRKAGLMANGADAKKLKIWMGKRKVGESDSDDSDEDEAENEEES 240

Query: 248 EKSVILNVGRSDLNKDTEGSSDSVNFGKSGDGSGGSSCESGSEEEKDMAVQETMELVGSS 307
           EKSVILN GRSDLNKD EGSSDSVN+GK+GDGSGGSSCESGSEEEKDMA  ETMELVGSS
Sbjct: 241 EKSVILNDGRSDLNKDAEGSSDSVNYGKAGDGSGGSSCESGSEEEKDMAALETMELVGSS 300

Query: 308 SEKTLQSEQVVVVEMNDQTTQSAVVPCSEAVAVSAHQEDEAAKQDAREVEIANSKNVSAN 367
           SEKT+QSEQV VVE NDQTTQSAV+PCSEAVAVS HQEDE  KQD    EIAN +NVSAN
Sbjct: 301 SEKTIQSEQVDVVETNDQTTQSAVLPCSEAVAVSPHQEDEIVKQD----EIAN-ENVSAN 360

Query: 368 HQDITDPNNGEIIEDLSTGPEPNGPPESKLSDHEETTVIASSSEASLNFDDFSSAAEMEV 427
           HQDI++PN+ EIIEDLST PEPNGPP SKLSDH+ETT   S+SE  LNFD FSSAAEMEV
Sbjct: 361 HQDISNPNSCEIIEDLSTLPEPNGPPVSKLSDHDETTATVSNSEIPLNFDGFSSAAEMEV 420

Query: 428 LGLERLKSELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK 472
           LGLERLKSELQARGLKCGGTLQERA RLFLLKSTPLDKLPKKLLARK
Sbjct: 421 LGLERLKSELQARGLKCGGTLQERAVRLFLLKSTPLDKLPKKLLARK 462

[Close]

BLAST of Clc06G01260 vs. ExPASy TrEMBL
Match: A0A6J1EPF3 (protein SDE2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111436363 PE=3 SV=1)

HSP 1 Score: 711.4 bits (1835), Expect = 2.4e-201
Identity = 398/475 (83.79%), Postives = 425/475 (89.47%), Query Frame = 0


Query: 1   MEATGTNINSRDSVEIFNLFVRLLDGKTLALKLTSPSVHGHALKHRLFQTTGIPPNHQRL 60
           MEATG +I+ R +VEIFNLFVRLLDGKTLALKL SPSV+GHALKH L+++TGIPPNHQRL
Sbjct: 1   MEATGADISRRQNVEIFNLFVRLLDGKTLALKLNSPSVYGHALKHSLYESTGIPPNHQRL 60

Query: 61  VTGIRQIEDDSVVSCSG---GRFPTVYLLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDA 120
           VTG+R IEDDSVVSCSG   G+FPT++LLLRL+GGKGGFGSLLRGAATKAGQKKTNNFDA
Sbjct: 61  VTGVRPIEDDSVVSCSGEPSGKFPTIHLLLRLVGGKGGFGSLLRGAATKAGQKKTNNFDA 120

Query: 121 CRDMSGRRLRHVNAEKRLEEWKAEEEERRLEKVAEEFLKKKAKVGKKGVGDSAAQKYVEK 180
           CRDM GRRLRHVNAEKRLEEWKAEEEERRLE VAEEFLKKK KVGKKGVGDSAAQKYVEK
Sbjct: 121 CRDMRGRRLRHVNAEKRLEEWKAEEEERRLETVAEEFLKKKGKVGKKGVGDSAAQKYVEK 180

Query: 181 YREESARCVAEVEESVRDAVMNGKRKAGSMAIGADAKKLKIWMGKRKMGESDSDDSDEDD 240
           YREESARCVAEV ESVRDAVM GKRK G MA G DAKKLKIWMGKRKMGESDSDDSDEDD
Sbjct: 181 YREESARCVAEVVESVRDAVMKGKRKGGLMANGGDAKKLKIWMGKRKMGESDSDDSDEDD 240

Query: 241 TENEEESEKSVILNVG-RSDLNKDTEGSSDSVNFGKSGDGSGGSSCESGSEEEKDMAVQE 300
           TENE ESEKSVILNVG +SDLNKDTEGSSDSVNFGK G  SGGSSCESGSEEEKD+A+QE
Sbjct: 241 TENEGESEKSVILNVGCQSDLNKDTEGSSDSVNFGKRGVCSGGSSCESGSEEEKDLAMQE 300

Query: 301 TMELVGSSSEKTLQSEQVVVVEMNDQTTQSAVVPCSEAVAVSAHQEDEAAKQDAREVEIA 360
           T+ELVGSS+EK    EQV VVEMN Q T+ A+V CSEAVAVSAHQEDE  KQDA EVEIA
Sbjct: 301 TLELVGSSTEKAFH-EQVDVVEMNYQNTRGAIVSCSEAVAVSAHQEDEVVKQDAHEVEIA 360

Query: 361 NSKNVSANHQDITDPNNGEIIEDLSTGPEPNGPPESKLSDHEETTVIASSSEASLNFDDF 420
           NS+NV+A  Q I+ P NG+IIEDLST PEPNG P SKLSDHEET    SSSE  LNF DF
Sbjct: 361 NSENVAAIPQHISHP-NGQIIEDLSTLPEPNGSPVSKLSDHEETNATTSSSETPLNFGDF 420

Query: 421 SSAAEMEVLGLERLKSELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK 472
           +SA+EMEV+GLERLK+ELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK
Sbjct: 421 NSASEMEVVGLERLKAELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK 473

[Close]

BLAST of Clc06G01260 vs. ExPASy TrEMBL
Match: A0A6J1JT15 (protein SDE2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488625 PE=3 SV=1)

HSP 1 Score: 706.8 bits (1823), Expect = 5.9e-200
Identity = 395/475 (83.16%), Postives = 422/475 (88.84%), Query Frame = 0


Query: 1   MEATGTNINSRDSVEIFNLFVRLLDGKTLALKLTSPSVHGHALKHRLFQTTGIPPNHQRL 60
           MEATG +++ R +VEIFNLFVRLLDGKTLALKL S SV+GHALKH L+++TGIPPNHQRL
Sbjct: 1   MEATGADVSRRQNVEIFNLFVRLLDGKTLALKLNSSSVYGHALKHSLYESTGIPPNHQRL 60

Query: 61  VTGIRQIEDDSVVSCSG---GRFPTVYLLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDA 120
           VTG+R IEDD VVSCSG   G+FPT++LLLRL+GGKGGFGSLLRGAATKAGQKKTNNFDA
Sbjct: 61  VTGVRPIEDDLVVSCSGEPSGKFPTIHLLLRLVGGKGGFGSLLRGAATKAGQKKTNNFDA 120

Query: 121 CRDMSGRRLRHVNAEKRLEEWKAEEEERRLEKVAEEFLKKKAKVGKKGVGDSAAQKYVEK 180
           CRDM GRRLRHVNAEKRLEEWKAEEEERRLE VAEEFLKKK KVGKKGVGDSAA KYVEK
Sbjct: 121 CRDMRGRRLRHVNAEKRLEEWKAEEEERRLETVAEEFLKKKGKVGKKGVGDSAAHKYVEK 180

Query: 181 YREESARCVAEVEESVRDAVMNGKRKAGSMAIGADAKKLKIWMGKRKMGESDSDDSDEDD 240
           YREESARCVAEV ESVRDAVM GKRK G MA G DAKKLKIWMGKRKMGESDSDDSDEDD
Sbjct: 181 YREESARCVAEVVESVRDAVMKGKRKGGLMANGGDAKKLKIWMGKRKMGESDSDDSDEDD 240

Query: 241 TENEEESEKSVILNVG-RSDLNKDTEGSSDSVNFGKSGDGSGGSSCESGSEEEKDMAVQE 300
           TENE ESEKS ILNVG +SDLNKD EGSSDSVNFGK GDGSGGSSCESGSEEEKD+AVQE
Sbjct: 241 TENEGESEKSAILNVGCQSDLNKDIEGSSDSVNFGKRGDGSGGSSCESGSEEEKDLAVQE 300

Query: 301 TMELVGSSSEKTLQSEQVVVVEMNDQTTQSAVVPCSEAVAVSAHQEDEAAKQDAREVEIA 360
           T+ELVGSS+EK  Q EQ   VEMN Q T+ A+V CSEAVAVSAHQEDE  KQDA EVEIA
Sbjct: 301 TLELVGSSTEKAFQFEQ---VEMNYQNTRGAIVSCSEAVAVSAHQEDEVVKQDAHEVEIA 360

Query: 361 NSKNVSANHQDITDPNNGEIIEDLSTGPEPNGPPESKLSDHEETTVIASSSEASLNFDDF 420
           NS+NV+A  + I+ P NG+IIEDLST PEPNG P SKLSDHEET    SSSEA L+F DF
Sbjct: 361 NSENVAAIPRHISHP-NGQIIEDLSTLPEPNGSPVSKLSDHEETNATISSSEAPLSFGDF 420

Query: 421 SSAAEMEVLGLERLKSELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK 472
           +SAAEMEVLGLERLK+ELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK
Sbjct: 421 NSAAEMEVLGLERLKAELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK 471

[Close]

BLAST of Clc06G01260 vs. TAIR 10
Match: AT4G01000.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 330.9 bits (847), Expect = 1.7e-90
Identity = 224/452 (49.56%), Postives = 276/452 (61.06%), Query Frame = 0


Query: 20  FVRLLDGKTLALKLTSPSVHGHALKHRLFQTTGIPPNHQRLVTGIRQIEDDSVVSCSGGR 79
           FVRLLDGK+L L  +SP  +G  +K R+F+ T IP + QRL++G  QI D S +S     
Sbjct: 12  FVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAISQPDA- 71

Query: 80  FPTVYLLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWK 139
             TV L+L L GGKGGFGSLLRG   KAGQKKTNNFDACRDMSGRRLRHVNAE RL+EWK
Sbjct: 72  --TVNLVLSLRGGKGGFGSLLRGGGMKAGQKKTNNFDACRDMSGRRLRHVNAENRLQEWK 131

Query: 140 AEEEERRLEKVAEEFLKKKAKVGKKGVGDSAAQKYVEKYREESARCVAEVEESVRDAVMN 199
             EE R LEK A E+LKK++   K+GVG+ A QKYV KY+EES +C+  V+ ++ ++  N
Sbjct: 132 DGEEGRNLEKKALEYLKKQSNKVKQGVGNGATQKYVNKYKEESDKCILAVDLALNESFKN 191

Query: 200 GKRKAGSMAIGADAKKLKIWMGKRKMGESDSDDSDEDDTENEEESEKSVILNVGRSDLNK 259
           GKRKA   A     K+LKIW GKR + +SDSDDSD      +EE EKSV+LN        
Sbjct: 192 GKRKAKIGAESEKKKRLKIWKGKRAVEDSDSDDSD------DEEDEKSVVLN-------- 251

Query: 260 DTEGSSDSVNFGKSGDGSGGSSCESGSEEEKDMAVQETMELVGSSSEKTLQSEQVVVVEM 319
                    N G  GD SG SSC SGSEEE D  +  + ++V    E+    + ++  EM
Sbjct: 252 ---------NGGHDGDSSGKSSCNSGSEEENDAVMHRSFDVV---KEEITGVQGIIEEEM 311

Query: 320 NDQTTQSAVVPCSEAVAVSAHQEDEAAKQDAREVEIANSKNVSANHQDITDPNNGEIIED 379
           ND       +P S AV  +    DE    D  E    +S +   N  D+         E 
Sbjct: 312 ND-------LPVSVAVDDANTVADE---MDQLEKVEKSSGDAGKNLVDVA-------CET 371

Query: 380 LSTGPEPNGPPESKLSDHEETTVIASSSEASLNFDDFSSAAEMEVLGLERLKSELQARGL 439
           L T        E    +      +       LNFDDF+S A+MEVLG+ERLK+ELQ+RGL
Sbjct: 372 LITSAAVK--REGTAKETVSVDAVCCKPVEPLNFDDFNSPADMEVLGMERLKTELQSRGL 415

Query: 440 KCGGTLQERAARLFLLKSTPLDKLPKKLLARK 472
           KCGGTL+ERAARLFLLKSTPLDKLPKKLLA+K
Sbjct: 432 KCGGTLRERAARLFLLKSTPLDKLPKKLLAKK 415

[Close]

BLAST of Clc06G01260 vs. TAIR 10
Match: AT3G06455.1 (ubiquitin family protein )

HSP 1 Score: 194.9 bits (494), Expect = 1.5e-49
Identity = 171/463 (36.93%), Postives = 225/463 (48.60%), Query Frame = 0


Query: 13  SVEIFNLFVRLLDGKTLALKLTSPSVHGHALKHRLFQTTGIPPNHQRLVTGIRQIEDDSV 72
           S +    FVRLLDGK++ L  +SP   G  +K R+F+ T IP + QRL++G  QI   S 
Sbjct: 5   SCKPLQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASA 64

Query: 73  VSCSGGRFPTVYLLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAE 132
           +S S     T+ L+L L GGKGG GSLLR    KAGQKKTNNFD+C              
Sbjct: 65  ISQSD---TTMNLVLSLRGGKGGLGSLLRNVVMKAGQKKTNNFDSC-------------- 124

Query: 133 KRLEEWKAEEEERRLEKVAEEFLKKKAKVGKKGVGDSAAQKYVEKYREESARCVAEVEES 192
                                            VGD A QK V KY+  S +C+  V  +
Sbjct: 125 ---------------------------------VGDGATQKNVNKYKGGSDKCILAVHLA 184

Query: 193 VRDAVMNGKRKAG---SMAIGADAKKLKIWMGKRKMGESDSDDSDEDDTENEEESEKSVI 252
           + +   NG ++ G     A    +K++KIW GKR + +SDSDDS      ++EE EKSV+
Sbjct: 185 LNETFKNGNKRKGKKMGTAESEKSKRIKIWNGKRAVEDSDSDDS------SDEEDEKSVV 244

Query: 253 LNVGRSDLNKDTEGSSDSVNFGKSGDGSGGSSCESGSEEEKDMAVQETMELVGSSSEKTL 312
                SD +KDT+ SS SV  G S DG            E D  V ++ ++V        
Sbjct: 245 GGQVDSD-HKDTDESSGSVLDG-SHDG------------ENDFVVHQSSDVV-------- 304

Query: 313 QSEQVVVVEMNDQTTQSAVVPCSEAVAVSAHQEDEAAKQDAREVEIANSKNVSANHQDIT 372
           + E  VV  +N++           AVA +  Q ++  K              S+ + D  
Sbjct: 305 KGEITVVQRINEEKMDDF------AVADAMDQLEKVEK--------------SSGNDDFV 345

Query: 373 DPNNGEIIEDLSTGP-EPNGPPESKLSDHEETTVIASSSEASLNFDDFSSAAEMEVLGLE 432
               G   E +   P EP                        LNF +F +A +MEVLG+E
Sbjct: 365 VKRGGTAKERVCCKPVEP------------------------LNFAEFKAATDMEVLGME 345

Query: 433 RLKSELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLARK 472
           RLK+ELQ+RGLKC GTL+ERAARLFLLKSTPLDKLPKKLLA+K
Sbjct: 425 RLKTELQSRGLKCRGTLRERAARLFLLKSTPLDKLPKKLLAKK 345

[Close]

BLAST of Clc06G01260 vs. TAIR 10
Match: AT5G06160.1 (splicing factor-related )

HSP 1 Score: 57.0 bits (136), Expect = 4.7e-08
Identity = 33/65 (50.77%), Postives = 42/65 (64.62%), Query Frame = 0


Query: 406 SSEASLNFDDFSSAAEMEVLGLERLKSELQARGLKCGGTLQERAARLFLLKSTPLDKLPK 465
           S    ++ D +S+  E+  +G E+LK  L A GLK GGT Q+RA RLFL K TPL+KL K
Sbjct: 235 SQHTVIDLDYYSTVEELVDVGPEKLKEALGALGLKVGGTPQQRAERLFLTKHTPLEKLDK 294

Query: 466 KLLAR 471
           K  AR
Sbjct: 295 KHFAR 299

[Close]

BLAST of Clc06G01260 vs. TAIR 10
Match: AT1G65350.1 (ubiquitin 13 )

HSP 1 Score: 48.1 bits (113), Expect = 2.2e-05
Identity = 35/127 (27.56%), Postives = 65/127 (51.18%), Query Frame = 0


Query: 19  LFVRLLDGKTLALKLTSPSVHGHALKHRLFQTTGIPPNHQRLVTGIRQIEDDSVVSCSGG 78
           +FV+ L GKT+ L++ S     + +K ++    GIPP+ QRL+   +Q+ED   ++ +  
Sbjct: 79  IFVKTLTGKTITLEVESSDTIDN-VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADNIQ 138

Query: 79  RFPTVYLLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEW 138
           +  T++L+LRL GG   F   L G       + ++  D           +V A+ + +EW
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID-----------NVKAKIQDKEW 193

Query: 139 KAEEEER 146
              +++R
Sbjct: 199 IPPDQQR 193

[Close]

BLAST of Clc06G01260 vs. TAIR 10
Match: AT1G55060.1 (ubiquitin 12 )

HSP 1 Score: 47.0 bits (110), Expect = 4.9e-05
Identity = 31/99 (31.31%), Postives = 53/99 (53.54%), Query Frame = 0


Query: 19  LFVRLLDGKTLALKLTSPSVHGHALKHRLFQTTGIPPNHQRLVTGIRQIEDD-SVVSCSG 78
           +FV+ L GKT+ L++ S     + LK ++    GIPP+ QRL+   +Q+ED  ++   + 
Sbjct: 79  IFVKTLTGKTITLEVESSDTIDN-LKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 138

Query: 79  GRFPTVYLLLRLLGGKGGFGSLLRGAATKAGQKKTNNFD 117
            +  T++L+LRL GG   F   L G       + ++  D
Sbjct: 139 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 176

The following BLAST results are available for this feature:

BLAST of Clc06G01260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875299.1	9.0e-227	92.36	replication stress response regulator SDE2 [Benincasa hispida]	[more]
XP_004140590.1	1.9e-216	89.29	replication stress response regulator SDE2 [Cucumis sativus] >KGN46346.1 hypothe...	[more]
XP_008460000.1	3.7e-212	88.65	PREDICTED: protein SDE2 homolog [Cucumis melo]	[more]
KAA0039912.1	2.4e-211	88.44	protein SDE2-like protein [Cucumis melo var. makuwa] >TYK24588.1 protein SDE2-li...	[more]
XP_022929896.1	5.0e-201	83.79	protein SDE2 homolog [Cucurbita moschata]	[more]

BLAST of Clc06G01260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7T293	2.4e-20	29.51	Replication stress response regulator SDE2 OS=Danio rerio OX=7955 GN=sde2 PE=2 S...	[more]
Q07G43	2.0e-19	29.95	Replication stress response regulator SDE2 OS=Xenopus tropicalis OX=8364 GN=sde2...	[more]
Q8K1J5	1.2e-16	30.41	Replication stress response regulator SDE2 OS=Mus musculus OX=10090 GN=Sde2 PE=1...	[more]
Q6NRI5	1.6e-16	31.46	Replication stress response regulator SDE2 OS=Xenopus laevis OX=8355 GN=sde2 PE=...	[more]
Q5BJN8	2.1e-16	30.47	Replication stress response regulator SDE2 OS=Rattus norvegicus OX=10116 GN=Sde2...	[more]

BLAST of Clc06G01260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEZ6	9.1e-217	89.29	Ubiquitin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G087...	[more]
A0A1S3CBI3	1.8e-212	88.65	protein SDE2 homolog OS=Cucumis melo OX=3656 GN=LOC103498946 PE=3 SV=1	[more]
A0A5D3DLW6	1.2e-211	88.44	Protein SDE2-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1EPF3	2.4e-201	83.79	protein SDE2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111436363 PE=3 SV=1	[more]
A0A6J1JT15	5.9e-200	83.16	protein SDE2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488625 PE=3 SV=1	[more]

BLAST of Clc06G01260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01000.1	1.7e-90	49.56	Ubiquitin-like superfamily protein	[more]
AT3G06455.1	1.5e-49	36.93	ubiquitin family protein	[more]
AT5G06160.1	4.7e-08	50.77	splicing factor-related	[more]
AT1G65350.1	2.2e-05	27.56	ubiquitin 13	[more]
AT1G55060.1	4.9e-05	31.31	ubiquitin 12	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 128..160
None	No IPR available	PFAM	PF13297	Telomere_Sde2_2	coord: 411..469 e-value: 2.9E-27 score: 94.0
None	No IPR available	GENE3D	3.10.20.90		coord: 10..94 e-value: 2.5E-8 score: 35.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 340..354
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 355..371
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..283
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 340..398
None	No IPR available	PANTHER	PTHR12786	SPLICING FACTOR SF3A-RELATED	coord: 18..470
None	No IPR available	PANTHER	PTHR12786:SF1	REPLICATION STRESS RESPONSE REGULATOR SDE2	coord: 18..470
None	No IPR available	CDD	cd17039	Ubl_ubiquitin_like	coord: 19..77 e-value: 1.16405E-6 score: 44.1242
IPR024974	Sde2, N-terminal ubiquitin domain	PFAM	PF13019	Sde2_N_Ubi	coord: 71..160 e-value: 2.0E-29 score: 102.6
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 17..92 score: 9.961455
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 15..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G01260.1	Clc06G01260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007049	cell cycle
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding