Clc06G01200 (gene) Watermelon (cordophanus) v2

Overview
NameClc06G01200
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionSerine/threonine-protein kinase pakD isoform X1
LocationClcChr06: 1044532 .. 1050575 (+)
RNA-Seq ExpressionClc06G01200
SyntenyClc06G01200
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGATATGAAATTGGTATTGGACAGGAAGCCCTGGTATCAAAGAGCAATGGAAATAGTGGGAAGTCAATGGAAAACAAGTTCAAAATCAAGAGAAATCACAATTCCAACAACAAATGGGACATTGAATTCCAAGGGCAATGAATTCTCAGGAATTGGAAATAATTCCAATAATAATAATAATAAGCACAACAAAATGAGAAAATGCACTTCTCTAAAGTTGGCAACTTCATTCACAAGAGTTTGTCTTTGTGCACCAATCTCTTCTTACAATGAAATATTTCAACAAGCTGAAATTCCACCAAGGAGAAGCCATAGCTATCCAAGATCTAAGCCTTTTCCAACCAATGGCAACCATATCACACATGAAAGAGTATTTCTTCCAAGTGCAAGAGTTAGCAGCGAAACTAGTCGACGATTTTTTCGAGGAAAGTCCCTCACCGACGACGTTTTGATGCGAAGATTCGTCGTCGAAGAAGAGGCAATGATGCAAGTGAGGAGGAGAAACCAAATGGAAGTTATAAGGAAAAGGAATTTGATGAGAAGGAAGAAGCTTGGACCAAGCCCTCTTAGCAAAATGGTCATAGCTGAGGAAGAACAAGACTTGTAAAGTTTTGAAGTTTCTCTCTTTCCTTCATTTTTTTTTTTTTAATATTATTATTTTTGCAAAATTTTGCTAGTTGTCTTTGAGGGGTTGCATTCCAGCAATTTATGTGCAAGTTTTGCTACAATGTATAATTTAAAATTTTTTTTTTAATTACAAGTTTTGTCCTTGAACTTTCAAGGTTGGGTGTATTTAGTTTTAAAATTTTAAAACATAACTTATAATAGATTTTTGAGTTGTTCTACCTTTTAAATTTATGCATGTACTTTAAACAATATTCAATAAGTCCCAGCGAAAGTGCATAGACAAGCTAAAAGATTTTAAAATATAGAAATAAGTGGTTTGTCAAATATTTATAATTTAACTTTAACTTTTTCTTTTAACAAAACATATTATAATGTAAAAAATCGAATATATTAGATTTACTTTGTATTAGTCAAACTTTATTACGGTTAGGTGATGATGTTTTTTAATGGCTAAATTCGTTGTATCAAACTGATTGATCTTATATATCTTTGTAACCTATGTAATTGTTTCAACCTCTAATGAAAATTTTATGTTAAAATATATATATAGATGGAGAGCGCTTTAATAATGAAAAGCCCTCTGTGAAGTTTTATTTATATAGAAAAATTATTATAAATAAAAAAATAATATCAAAATATTTATAAATATAAAAAAAATTTCATTCAAATATTATATTAATTAATTTATGAACATTTTCTAGGTTCTAAACTTCATATAATTATTATTATTTTACAGTATTATATAATTTATGATATATTATATTAAAAATAGTCTAATTGAACAAAAAATGAGATGAGGTTCATAACCTCAAATATTATACTTGTAAAAATTTTCTTTTATCTTTCCTCGATGGAAATCTGCATTTTAAAATTTCAAATTTCAAAATCAAAAATTGAGAGAGATATGAAATAAATATGTGTTGAATCCATTTTCTCTGCAGATCTAAAATTATAAAACGCGGGTTTAAAAGAATATTAGGATAAACAAAGTTTGACCTAATATCCTTTTTCTATATATAAAATAAATAAAAATGGTAAATCCAAAACTTTGACTTAATTAAAAGCCAAATTTAACCACCTCAATATATAGCATGCATTGCTTAAAAGCCACTCTCCAAATAACTAACTTTCAAAGGAAGCTTAGTGGTTGTGTAATCCATATCAAAGAACTTGAACTTGAGACCATTTTTAGTGTTTTTCTTTAATCCTCTAATAAATTATAGCCCTCTTCCAACTCTAATTATTTCTTTCAAATATGCAATTATTTCTCATATGGTATCATATAGTTGGTTAGAATCAACTAATAACATAAAATCTAACCAAATCTATGTTATTATTAGACATTTCTTTTCAATATCTTGTTAATTAACATAGATTTTTTTTTCATTCTTTTATTATTTTTTATAGGAGAAAAAAACACCTCACTATACGATCTGAAAGAATTTAGAAAATTATTTTTTCTTACGTGTATAACGTCGATATAGATTTGATCTCGATAATGTGAAATATAATACAAGTTAAAGTTATATATGTGTGTATATATATAACTAAAGTTATACATTTCTTTTACTATTGTTCACATTATTAGTGATATTTTGTGTAACGACCCGACTTACATAATCTAACCGGACCATTACTCAATACACGTAAAATTCGAGAGACGCTATGCAACATTGTAAAAAGAAGAAACAATGCTTTTCAGGGAAGTTTCTATTAATATAATTTCGAGAAAAACATCCATAAACATGTAAAAGAAGTTTTGGTTCGGGATACCCTTAATGAAATCAATAAAATTCATGAAAAAGAAAGCCACATATCAAAAGTCTCAAAAACCCAACATTTGGACAAAGCTCCATAAAACATAAAATGCTAAGCGGAAGCTACTACGGGTCCCGTGATCCCATCAAGGATTCTTTTTGTCATTCGCCATCACGTTCTTTCCCTTACCTGAAAAACATATAAGATAAAATGATGAGTAATTTATTACTCAGTAAGTGTCCCCACTACCTAGAGTCGGGCTAAGCACCTAAGTCCCTTAAGTGCATCAACATAAGGGATACATATCTAACATACTTTCATTGGGAATAGTTTACACTCACCCTACAGTTGGTTATGGATGTCCACAAACCTCTAGAGCCCCGAAGGAAACTCTTACCTCTGGTGATCCCGAAGGAACACAAACCTCTAATGTACTCGAAAGAGCACAACCTCTGATGAACCCGAAGTAACACAACCTCCTATGAACCTGAAGGAACACAACCTCTAGTGCACCCGAAGGTACACATTCTCTAGTGATCCCGAAGGAACGCAACCTCCCATGGACCCGAAGGTACATAACCTCCTGTGAACACCCAACCAATATAGGGGAGGTAACTCTATTCCTAGAGCGTAAACAATCATAATCATACTCATTCCATTCCATGTCTTCATACATTAAAATACAATACTATCCATTACATAACATGACATAGGGTCATACATTAATAAGCACATACAACTTAGGACATGGTAATCTCATGCAAGCATGCTATATCATAAAGGTCTTGGGAATTTCTACTTTTAAGCATGGAAATCTCATACAAGCATGCTATATCATAAGGACTTTGATAATTTCTATCTTTAGGCATAGGGATCTCATACGAGCATGCTAAATCATAAAAGCTTTGGTAATTTCCTACTTCATGGCAACTAAACGTGTGGCCCGAAGGCGGTTCAGGTAGTAAGATCACTTACCTGGTGATCGATCCATCAAATTACTATACGGCTCCTCTTATAAAAATTAATTCCTGAATAAACCGGAAATAAAATTTTCCCCAATTTAAGTTAGTCTACGAGTTTAGTCTATCATGAATAACCTAAAAATATTTGTTCGAGAAAGTCCTTACCCGAACGCGACCCAACTCGTAGCTTCCCCCGATCCTACGGACTAACAATTACCGAACACCTATTGAAATATATCAAATAAAGTTCGAAATTCTCAAATCTCCATCCAAAACATAAGCAACTAACCCATTCGAGTTTGAGATACTCACTTAAAGGTACTGTTCTGGCCAGACAAGAAAGGAACCGTTGCCGATAGCCAAAAATCTGAGAGAGAATGATTCCCGAGCGAGAAGCGAGACTTGAGCGAGAAAGCGAGAGCCGAGACAGCGAAACCGGCGAGAGAGCAAGAGTCTGAAGGCTTGTGGCGACACTGGGCGCGGGGAAACATGAGTCGAGCAGGAGAGCGAGAGCGCGAGACAGCGGGAGAGCGAGACAGCGATACCACGAGAGCCCGATAGCGTGAATGCCTGGCCGAGGGAAAGCGAGACAACGTGAATCCGGGGGAAGCGATACGCAGCGAGAGAGCGATACCCTTCAACGCAACAGCGACACTCTGGCGACGGCAACGTGAATCAGCGACACTCTACGCGTGAAACAACCGGGAGCTCACGGAAACTGAAGAAGAGCGAGAGAGAAAGGTGTCGGGGCAGAGGGAGGCTGGCGGCGGCTGCGACGGCGGCGAAAGGGAAAGGAAAGGGAGAGCGAGAGATGCGGCGGAGAGAGAAAGGGATGGTTATTTTCTTTTCTTTTTCTTTTTGACTGCACGGAAAACGAGGTAATCCCTCTCCCTCCTTAAACCCAAATTTTTCCCAATTTTTCCCTTTAACCAATCAAGGTAAAAAATATCCTTCATTCCACCAAAATAATTATTTTATTCTATTTGACCTAAAATAGAATAAGAATAAGTTATTCTTTACCAAAATCTAACATTTTCCTTAATTCCACCTTCAATTCTCTAACCACCATAAATAACATTTTTGGAACTTCCCTATTTAACTTAAGTAAATACAATAATGCATATGAACAATTAAAATTCTCTTTTTATGCAAAATAACTTAATTTAATTGATTAGGGGAATTTACCTCAAGGGTTTGGGGTCGTTACATTTTGTTAACATTTTTATACTTCATTTATCATGTGCTGAAAATCTCAATTAATTAAACTCATTTATTATTGGTGTCAAACTTTTGGATATATATGGAAATACAACATCTTGGAGATGTTGATATTATGATTAGTTATGGGTTCAAAGTACATATATAGAATTTGAAATTTATCATAGGTATGTCTATTATATCTTTATACTTTAGAAAGTTTTCAATAGATTTTCAAAATTTCCGAATTGTTCTTGTATACACATGTATTTCAAAAAGTTTCTAAAGAGTTCTATAATTTTTAATTTTGTGTCTTGTGAGTTTATATTGTTAACTTCGTCGGTTGTATACTATATGTAATGGTAGAGAGAAGAAAGAAAAGATTGGACAGTAATTATACAATGGCGGAGGGAAGAAGGATAAGTACAATTCTTCTTATAGTTTCGTTGTCTTATATTCAAAGAAATATACATGAACTTTTCCTCTATTTTGTCCCAACTCTAATTTTTAGATTTAAATGGTTGTTATATAAAAGGTTGGAATGTAAAATTCTATAATTTTGTAGGAAAATTTGTGCTATGATCTTACAAAATTTGTGCTATGATCTTACAAAATTTGTGCTATGATCTTTTGTTCTAACTTAGGTTAGATGTTATGTTGAGTATATTATTTAAGGATTACATAACCAGCTATCATGGAGTAGGTGCAAGCATTTGGTGGTGAAACAACAAATTAAAAAAGTTAGTTTAAAGATCTATTAAAAACCAAATCAAAAAGGTAAAAAAATTTATGTTAAAAAACTCTTTTGATTCTTGAGAAAGTAACGATTTATAGTATGTGTACTTTCGAAGTTGTTGGAACTTAAAAAAAAATGAATTCTACCATTTATAAACGACTTAAAATGTTTATTTTTGATGTCGAATTTTGGATTGGGCAACAATGGTAAATTTGTTTGTATAGAGAGAAAAAAAGAGTACAATCACACATCGGTGTGGTGGGTGCCACATCTACTCCGATGCTTAAGTTAGTAAAGAATCAAAGGAGGAAGAAATACAAAATTGAAATTCTCATAATTTACTTAACTTTCAGGAAGCCTCCATGGTCTATTTATAGGTTTTCTTACCTTAATCATTTTAGAATTAGGTTTCAGAATATATTTAGGAGGTTTTTTAGGGTTTTTGGACCCAACAAAGCGAGTAGGATACTTTTGAGCTAATTTGCTAGGCTCAAAATGGAGTTCGACCAATTCCTTTCTCTTTCACTGGCTCACTGGTCTAGGCAGTGTGAAATTAGATAGTTTCCTGGTTGATTCACTAGGTTCACCATAGGTCGGGGGCAAGGAGATTGGAATGGGCTCTGGTCCATTCCTTCCTCTTTCAATATTAGTCCACCTGATGCAAAAGGGATAGTTCCTCGGTCGATTCATCAAGCTCAACCTCAACCTAGGCTGAGGAGTTCAAAATGGGCTCTAGTCCATTCCTTCATCTTTCCCTAG

mRNA sequence

ATGCATGATATGAAATTGGTATTGGACAGGAAGCCCTGGTATCAAAGAGCAATGGAAATAGTGGGAAGTCAATGGAAAACAAGTTCAAAATCAAGAGAAATCACAATTCCAACAACAAATGGGACATTGAATTCCAAGGGCAATGAATTCTCAGGAATTGGAAATAATTCCAATAATAATAATAATAAGCACAACAAAATGAGAAAATGCACTTCTCTAAAGTTGGCAACTTCATTCACAAGAGTTTGTCTTTGTGCACCAATCTCTTCTTACAATGAAATATTTCAACAAGCTGAAATTCCACCAAGGAGAAGCCATAGCTATCCAAGATCTAAGCCTTTTCCAACCAATGGCAACCATATCACACATGAAAGAGTATTTCTTCCAAGTGCAAGAGTTAGCAGCGAAACTAGTCGACGATTTTTTCGAGGAAAGTCCCTCACCGACGACGTTTTGATGCGAAGATTCGTCGTCGAAGAAGAGGCAATGATGCAAGTGAGGAGGAGAAACCAAATGGAAGTTATAAGGAAAAGGAATTTGATGAGAAGGAAGAAGCTTGGACCAAGCCCTCTTAGCAAAATGGTCATAGCTGAGGAAGAACAAGACTTGTTCACCATAGGTCGGGGGCAAGGAGATTGGAATGGGCTCTGGTCCATTCCTTCCTCTTTCAATATTAGTCCACCTGATGCAAAAGGGATAGTTCCTCGGTCGATTCATCAAGCTCAACCTCAACCTAGGCTGAGGAGTTCAAAATGGGCTCTAGTCCATTCCTTCATCTTTCCCTAG

Coding sequence (CDS)

ATGCATGATATGAAATTGGTATTGGACAGGAAGCCCTGGTATCAAAGAGCAATGGAAATAGTGGGAAGTCAATGGAAAACAAGTTCAAAATCAAGAGAAATCACAATTCCAACAACAAATGGGACATTGAATTCCAAGGGCAATGAATTCTCAGGAATTGGAAATAATTCCAATAATAATAATAATAAGCACAACAAAATGAGAAAATGCACTTCTCTAAAGTTGGCAACTTCATTCACAAGAGTTTGTCTTTGTGCACCAATCTCTTCTTACAATGAAATATTTCAACAAGCTGAAATTCCACCAAGGAGAAGCCATAGCTATCCAAGATCTAAGCCTTTTCCAACCAATGGCAACCATATCACACATGAAAGAGTATTTCTTCCAAGTGCAAGAGTTAGCAGCGAAACTAGTCGACGATTTTTTCGAGGAAAGTCCCTCACCGACGACGTTTTGATGCGAAGATTCGTCGTCGAAGAAGAGGCAATGATGCAAGTGAGGAGGAGAAACCAAATGGAAGTTATAAGGAAAAGGAATTTGATGAGAAGGAAGAAGCTTGGACCAAGCCCTCTTAGCAAAATGGTCATAGCTGAGGAAGAACAAGACTTGTTCACCATAGGTCGGGGGCAAGGAGATTGGAATGGGCTCTGGTCCATTCCTTCCTCTTTCAATATTAGTCCACCTGATGCAAAAGGGATAGTTCCTCGGTCGATTCATCAAGCTCAACCTCAACCTAGGCTGAGGAGTTCAAAATGGGCTCTAGTCCATTCCTTCATCTTTCCCTAG

Protein sequence

MHDMKLVLDRKPWYQRAMEIVGSQWKTSSKSREITIPTTNGTLNSKGNEFSGIGNNSNNNNNKHNKMRKCTSLKLATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNHITHERVFLPSARVSSETSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLGPSPLSKMVIAEEEQDLFTIGRGQGDWNGLWSIPSSFNISPPDAKGIVPRSIHQAQPQPRLRSSKWALVHSFIFP
Homology
[Close]
BLAST of Clc06G01200 vs. NCBI nr
Match: XP_038875352.1 (diacylglycerol kinase A [Benincasa hispida])

HSP 1 Score: 334.3 bits (856), Expect = 9.2e-88
Identity = 176/199 (88.44%), Postives = 187/199 (93.97%), Query Frame = 0 

Query: 10  RKPWYQRAMEIVGSQWKTSSKSREIT-IPTTNGTLNSKGNEFSGIGNNSNNN-----NNK 69
           RKPWYQRAMEIVG+QWKTS KSRE+T IPTTNGT+NSKGNEFS IGNN+N+N     NNK
Sbjct: 10  RKPWYQRAMEIVGTQWKTSPKSREMTNIPTTNGTMNSKGNEFSRIGNNNNSNNSNNINNK 69

Query: 70  HNKMRKCTSLKLATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPT-NGNHIT 129
           +NKMRKCTSLK+ATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPT N NHIT
Sbjct: 70  YNKMRKCTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNNANHIT 129

Query: 130 HERVFLPSARVSSETSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMR 189
           HERV LP+AR+S E+SRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMR
Sbjct: 130 HERVLLPTARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMR 189

Query: 190 RKKLGPSPLSKMVIAEEEQ 202
           RKKLGPSPLSKM+IAEEEQ
Sbjct: 190 RKKLGPSPLSKMIIAEEEQ 208

[Close]
BLAST of Clc06G01200 vs. NCBI nr
Match: KAA0039919.1 (serine/threonine-protein kinase pakD isoform X1 [Cucumis melo var. makuwa] >TYK24581.1 serine/threonine-protein kinase pakD isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 307.4 bits (786), Expect = 1.2e-79
Identity = 166/204 (81.37%), Postives = 175/204 (85.78%), Query Frame = 0 

Query: 6   LVLDRKPWYQRAMEIVGSQWKTSSKSREITIPTTNGTLNSKGNEFSGIGNNSNNNNNKHN 65
           +V  RKPWYQRAMEIVG+QWKTSSKSREITI T NGT NSK         N+ N NN +N
Sbjct: 1   MVFSRKPWYQRAMEIVGTQWKTSSKSREITITTPNGTFNSKA--------NNGNKNNNNN 60

Query: 66  KMRKCTSLKLATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNH----- 125
           KMRKCTSLK+ATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTN N+     
Sbjct: 61  KMRKCTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNSNNNNGNN 120

Query: 126 ---ITHERVFLPSARVSSETSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRK 185
              ITHER+ LPSAR+S E+SRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRK
Sbjct: 121 NHIITHERILLPSARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRK 180

Query: 186 RNLM-RRKKLGPSPLSKMVIAEEE 201
           RNLM RRKKLGPSPLSKMVIAEEE
Sbjct: 181 RNLMRRRKKLGPSPLSKMVIAEEE 196

[Close]
BLAST of Clc06G01200 vs. NCBI nr
Match: XP_008460010.1 (PREDICTED: serine/threonine-protein kinase pakD isoform X1 [Cucumis melo])

HSP 1 Score: 304.7 bits (779), Expect = 7.8e-79
Identity = 165/200 (82.50%), Postives = 173/200 (86.50%), Query Frame = 0 

Query: 10  RKPWYQRAMEIVGSQWKTSSKSREITIPTTNGTLNSKGNEFSGIGNNSNNNNNKHNKMRK 69
           RKPWYQRAMEIVG+QWKTSSKSREITI T NGT NSK         N+ N NN +NKMRK
Sbjct: 12  RKPWYQRAMEIVGTQWKTSSKSREITITTPNGTFNSKA--------NNGNKNNNNNKMRK 71

Query: 70  CTSLKLATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNH--------I 129
           CTSLK+ATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTN N+        I
Sbjct: 72  CTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNSNNNNGNNNHII 131

Query: 130 THERVFLPSARVSSETSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLM 189
           THER+ LPSAR+S E+SRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLM
Sbjct: 132 THERILLPSARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLM 191

Query: 190 -RRKKLGPSPLSKMVIAEEE 201
            RRKKLGPSPLSKMVIAEEE
Sbjct: 192 RRRKKLGPSPLSKMVIAEEE 203

[Close]
BLAST of Clc06G01200 vs. NCBI nr
Match: XP_008460011.1 (PREDICTED: serine/threonine-protein kinase pakD isoform X2 [Cucumis melo])

HSP 1 Score: 304.7 bits (779), Expect = 7.8e-79
Identity = 165/200 (82.50%), Postives = 173/200 (86.50%), Query Frame = 0 

Query: 10  RKPWYQRAMEIVGSQWKTSSKSREITIPTTNGTLNSKGNEFSGIGNNSNNNNNKHNKMRK 69
           RKPWYQRAMEIVG+QWKTSSKSREITI T NGT NSK         N+ N NN +NKMRK
Sbjct: 11  RKPWYQRAMEIVGTQWKTSSKSREITITTPNGTFNSKA--------NNGNKNNNNNKMRK 70

Query: 70  CTSLKLATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNH--------I 129
           CTSLK+ATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTN N+        I
Sbjct: 71  CTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNSNNNNGNNNHII 130

Query: 130 THERVFLPSARVSSETSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLM 189
           THER+ LPSAR+S E+SRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLM
Sbjct: 131 THERILLPSARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLM 190

Query: 190 -RRKKLGPSPLSKMVIAEEE 201
            RRKKLGPSPLSKMVIAEEE
Sbjct: 191 RRRKKLGPSPLSKMVIAEEE 202

[Close]
BLAST of Clc06G01200 vs. NCBI nr
Match: XP_004140595.1 (probable myosin light chain kinase DDB_G0279831 [Cucumis sativus] >KAE8646731.1 hypothetical protein Csa_005764 [Cucumis sativus])

HSP 1 Score: 303.9 bits (777), Expect = 1.3e-78
Identity = 167/204 (81.86%), Postives = 177/204 (86.76%), Query Frame = 0 

Query: 10  RKPWYQRAMEIVGSQWK-TSSKSREITIPTTNGTLNSKGNEFSGIGNNSNNNNNKHNKMR 69
           RKPWYQRAMEIVG+QWK TSSK+REITI T NG  NSK N       N+NNN++K+NKMR
Sbjct: 11  RKPWYQRAMEIVGTQWKTTSSKAREITIATANGAFNSKAN-----NGNNNNNSSKYNKMR 70

Query: 70  KCTSLKLATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNH-------- 129
           KCTSLK+ATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTN N+        
Sbjct: 71  KCTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNNNNNNGNNTTN 130

Query: 130 --ITHERVFLPSARVSSETSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKR 189
             ITHERV LPSAR+S E+SRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKR
Sbjct: 131 HIITHERVLLPSARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKR 190

Query: 190 NLM-RRKKLGPSPLSKMVIAEEEQ 202
           NLM RRKKLGPSPLSKMVIAEEEQ
Sbjct: 191 NLMRRRKKLGPSPLSKMVIAEEEQ 209

[Close]
BLAST of Clc06G01200 vs. ExPASy TrEMBL
Match: A0A5D3DLW3 (Serine/threonine-protein kinase pakD isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001260 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 5.8e-80
Identity = 166/204 (81.37%), Postives = 175/204 (85.78%), Query Frame = 0 

Query: 6   LVLDRKPWYQRAMEIVGSQWKTSSKSREITIPTTNGTLNSKGNEFSGIGNNSNNNNNKHN 65
           +V  RKPWYQRAMEIVG+QWKTSSKSREITI T NGT NSK         N+ N NN +N
Sbjct: 1   MVFSRKPWYQRAMEIVGTQWKTSSKSREITITTPNGTFNSKA--------NNGNKNNNNN 60

Query: 66  KMRKCTSLKLATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNH----- 125
           KMRKCTSLK+ATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTN N+     
Sbjct: 61  KMRKCTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNSNNNNGNN 120

Query: 126 ---ITHERVFLPSARVSSETSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRK 185
              ITHER+ LPSAR+S E+SRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRK
Sbjct: 121 NHIITHERILLPSARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRK 180

Query: 186 RNLM-RRKKLGPSPLSKMVIAEEE 201
           RNLM RRKKLGPSPLSKMVIAEEE
Sbjct: 181 RNLMRRRKKLGPSPLSKMVIAEEE 196

[Close]
BLAST of Clc06G01200 vs. ExPASy TrEMBL
Match: A0A0A0KBW5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087190 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 2.2e-79
Identity = 168/208 (80.77%), Postives = 179/208 (86.06%), Query Frame = 0 

Query: 6   LVLDRKPWYQRAMEIVGSQWK-TSSKSREITIPTTNGTLNSKGNEFSGIGNNSNNNNNKH 65
           +V  RKPWYQRAMEIVG+QWK TSSK+REITI T NG  NSK N       N+NNN++K+
Sbjct: 1   MVFRRKPWYQRAMEIVGTQWKTTSSKAREITIATANGAFNSKAN-----NGNNNNNSSKY 60

Query: 66  NKMRKCTSLKLATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNH---- 125
           NKMRKCTSLK+ATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTN N+    
Sbjct: 61  NKMRKCTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNNNNNNGN 120

Query: 126 ------ITHERVFLPSARVSSETSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEV 185
                 ITHERV LPSAR+S E+SRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEV
Sbjct: 121 NTTNHIITHERVLLPSARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEV 180

Query: 186 IRKRNLM-RRKKLGPSPLSKMVIAEEEQ 202
           IRKRNLM RRKKLGPSPLSKMVIAEEEQ
Sbjct: 181 IRKRNLMRRRKKLGPSPLSKMVIAEEEQ 203

[Close]
BLAST of Clc06G01200 vs. ExPASy TrEMBL
Match: A0A1S3CBM1 (serine/threonine-protein kinase pakD isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498954 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 3.8e-79
Identity = 165/200 (82.50%), Postives = 173/200 (86.50%), Query Frame = 0 

Query: 10  RKPWYQRAMEIVGSQWKTSSKSREITIPTTNGTLNSKGNEFSGIGNNSNNNNNKHNKMRK 69
           RKPWYQRAMEIVG+QWKTSSKSREITI T NGT NSK         N+ N NN +NKMRK
Sbjct: 12  RKPWYQRAMEIVGTQWKTSSKSREITITTPNGTFNSKA--------NNGNKNNNNNKMRK 71

Query: 70  CTSLKLATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNH--------I 129
           CTSLK+ATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTN N+        I
Sbjct: 72  CTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNSNNNNGNNNHII 131

Query: 130 THERVFLPSARVSSETSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLM 189
           THER+ LPSAR+S E+SRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLM
Sbjct: 132 THERILLPSARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLM 191

Query: 190 -RRKKLGPSPLSKMVIAEEE 201
            RRKKLGPSPLSKMVIAEEE
Sbjct: 192 RRRKKLGPSPLSKMVIAEEE 203

[Close]
BLAST of Clc06G01200 vs. ExPASy TrEMBL
Match: A0A1S3CBJ3 (serine/threonine-protein kinase pakD isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498954 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 3.8e-79
Identity = 165/200 (82.50%), Postives = 173/200 (86.50%), Query Frame = 0 

Query: 10  RKPWYQRAMEIVGSQWKTSSKSREITIPTTNGTLNSKGNEFSGIGNNSNNNNNKHNKMRK 69
           RKPWYQRAMEIVG+QWKTSSKSREITI T NGT NSK         N+ N NN +NKMRK
Sbjct: 11  RKPWYQRAMEIVGTQWKTSSKSREITITTPNGTFNSKA--------NNGNKNNNNNKMRK 70

Query: 70  CTSLKLATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNH--------I 129
           CTSLK+ATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTN N+        I
Sbjct: 71  CTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNSNNNNGNNNHII 130

Query: 130 THERVFLPSARVSSETSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLM 189
           THER+ LPSAR+S E+SRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLM
Sbjct: 131 THERILLPSARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLM 190

Query: 190 -RRKKLGPSPLSKMVIAEEE 201
            RRKKLGPSPLSKMVIAEEE
Sbjct: 191 RRRKKLGPSPLSKMVIAEEE 202

[Close]
BLAST of Clc06G01200 vs. ExPASy TrEMBL
Match: A0A6J1KR77 (uncharacterized protein LOC111497548 OS=Cucurbita maxima OX=3661 GN=LOC111497548 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 1.3e-68
Identity = 148/192 (77.08%), Postives = 159/192 (82.81%), Query Frame = 0 

Query: 10  RKPWYQRAMEIVGSQWK-TSSKSR-EITIPTTNGTLNSKGNEFSGIGNNSNNNNNKHNKM 69
           RKPWYQRAMEIVG+QW+ TSSKSR +  IP+ NG  NS             N+NNKHNKM
Sbjct: 10  RKPWYQRAMEIVGTQWRTTSSKSRDQYPIPSPNGAFNS-------------NSNNKHNKM 69

Query: 70  RKCTSLKLATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNHITHERVF 129
           RKCTSLK+ATSFTRVCLCAPISSYNEIFQQA+IPPRRSHSYPRSKPFPT     T   + 
Sbjct: 70  RKCTSLKIATSFTRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFPTT----TTNNIV 129

Query: 130 LPSARVSSETSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLG 189
           LP+ ++S E SRR FRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLG
Sbjct: 130 LPTPQLSGENSRRVFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLG 184

Query: 190 PSPLSKMVIAEE 200
           PSPLSKMVIAEE
Sbjct: 190 PSPLSKMVIAEE 184

[Close]
BLAST of Clc06G01200 vs. TAIR 10
Match: AT3G59680.1 (unknown protein; Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 168.3 bits (425), Expect = 8.1e-42
Identity = 101/202 (50.00%), Postives = 141/202 (69.80%), Query Frame = 0 

Query: 5   KLVLDRKPWYQRAMEIV--GSQWKTSSKSREITIPTTNGTLNSKGNEFSGIGNNSNNNNN 64
           K++ +RKPWYQRAM +    + W+T  KS     P      N + +    + + S+N+N 
Sbjct: 8   KVMANRKPWYQRAMAVARFATNWRTIPKSSSQQQPE-----NFRPSRNPSVNSKSSNHNQ 67

Query: 65  KHNKMRKCTSLKL-ATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNHI 124
            ++++RKC+SLK+ A SFTRVCLCAPI  Y+++F +  +PPRRS SYP SKP P      
Sbjct: 68  IYHQLRKCSSLKVAANSFTRVCLCAPIGPYDDVF-RIHVPPRRSSSYPPSKPLP------ 127

Query: 125 THERVFLPSARVSSETSRRFFRGKSLTDDVLMRRFVV-EEEAMMQVRRRNQMEVIRKRNL 184
               V + +AR+S ++ RR FRGKSL ++ LMRRFVV EEEA+M+ R+R+QME++RKRN 
Sbjct: 128 METAVAVATARMSVDSGRRIFRGKSLRENALMRRFVVAEEEAIMENRKRDQMEIVRKRNQ 187

Query: 185 MRR-KKLGPSPLSKMVIAEEEQ 202
           MRR KKLGPSPLS+MVIAE+++
Sbjct: 188 MRRKKKLGPSPLSRMVIAEDQE 197

[Close]
BLAST of Clc06G01200 vs. TAIR 10
Match: AT3G59680.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 168.3 bits (425), Expect = 8.1e-42
Identity = 103/206 (50.00%), Postives = 140/206 (67.96%), Query Frame = 0 

Query: 1   MHDMKLVLDRKPWYQRAMEIV--GSQWKTSSKSREITIPTTNGTLNSKGNEFSGIGNNSN 60
           M D K    RKPWYQRAM +    + W+T  KS     P      N + +    + + S+
Sbjct: 32  MQDSKASPARKPWYQRAMAVARFATNWRTIPKSSSQQQPE-----NFRPSRNPSVNSKSS 91

Query: 61  NNNNKHNKMRKCTSLKL-ATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTN 120
           N+N  ++++RKC+SLK+ A SFTRVCLCAPI  Y+++F +  +PPRRS SYP SKP P  
Sbjct: 92  NHNQIYHQLRKCSSLKVAANSFTRVCLCAPIGPYDDVF-RIHVPPRRSSSYPPSKPLP-- 151

Query: 121 GNHITHERVFLPSARVSSETSRRFFRGKSLTDDVLMRRFVV-EEEAMMQVRRRNQMEVIR 180
                   V + +AR+S ++ RR FRGKSL ++ LMRRFVV EEEA+M+ R+R+QME++R
Sbjct: 152 ----METAVAVATARMSVDSGRRIFRGKSLRENALMRRFVVAEEEAIMENRKRDQMEIVR 211

Query: 181 KRNLMRR-KKLGPSPLSKMVIAEEEQ 202
           KRN MRR KKLGPSPLS+MVIAE+++
Sbjct: 212 KRNQMRRKKKLGPSPLSRMVIAEDQE 225

The following BLAST results are available for this feature:
BLAST of Clc06G01200 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038875352.19.2e-8888.44diacylglycerol kinase A [Benincasa hispida][more]
KAA0039919.11.2e-7981.37serine/threonine-protein kinase pakD isoform X1 [Cucumis melo var. makuwa] >TYK2... [more]
XP_008460010.17.8e-7982.50PREDICTED: serine/threonine-protein kinase pakD isoform X1 [Cucumis melo][more]
XP_008460011.17.8e-7982.50PREDICTED: serine/threonine-protein kinase pakD isoform X2 [Cucumis melo][more]
XP_004140595.11.3e-7881.86probable myosin light chain kinase DDB_G0279831 [Cucumis sativus] >KAE8646731.1 ... [more]
BLAST of Clc06G01200 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Clc06G01200 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DLW35.8e-8081.37Serine/threonine-protein kinase pakD isoform X1 OS=Cucumis melo var. makuwa OX=1... [more]
A0A0A0KBW52.2e-7980.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087190 PE=4 SV=1[more]
A0A1S3CBM13.8e-7982.50serine/threonine-protein kinase pakD isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3CBJ33.8e-7982.50serine/threonine-protein kinase pakD isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1KR771.3e-6877.08uncharacterized protein LOC111497548 OS=Cucurbita maxima OX=3661 GN=LOC111497548... [more]
BLAST of Clc06G01200 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G59680.18.1e-4250.00unknown protein; Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bac... [more]
AT3G59680.28.1e-4250.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..65
NoneNo IPR availablePANTHERPTHR36772SERINE/THREONINE-KINASEcoord: 1..201

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc06G01200.2Clc06G01200.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
molecular_function GO:0016301 kinase activity