Clc06G01130 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G01130
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Dirigent protein
Location	ClcChr06: 984258 .. 985091 (+)
RNA-Seq Expression	Clc06G01130
Synteny	Clc06G01130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAAAGAAAAAGAGGCTATAAAAACAGAGTAATAAGAGAATCAAAGGGCAACTCGCTTTATCTATTTTGTCTTTTTGAAAAAAGCTCTCTTGAAGAAGATGACATCTTCAATCTCAACCACCCACTTCATCCTCCTCTTCCTCTTCCTCTCTTCTTCCATAGCTTATGCACAGGAAGATGAAGCCTTCTTCATTAAAAAATCCATGGACAGAAAGCTTCTAGGCCTTGAAACAGAGCAGCTAAGCCATTTAAGGCTATATTGGCACGACGTTTTAAGTGGCGACAACCCAACTTCAATTGAGATCATACCTCCAATTTCAAACAAATTCCAGTCAGGATTTGGGTACATTCGAATGATCGACAATGCGCTGACAGAGGAACAAAATCGAAGCTCCAAGTTATTGGGAAGAGCTCAAGGATTCTATGCATCAGCTTCACAAGACAAAGTTGCGTTGTTAATGGCTATGAATTTTGTGTTTACGAGTGGAAAATACAACGGAAGCACCATTTCCATGTTTGGAAGGAATCCATGGATGGAGAATCTTAGAGAGTTGTCTGTGATTGGAGGAAGTGGGTTGTTTAGGTTTGCAAGAGGCTATGCTAAACTTCATACCGTTGAGCTTGATATTGCTAAAGGGAATGCTGTTGTTGAATACAACATTTACCTGTTCCATTACGCTGATTCCATTGCTTCATTTTAAGTTTTGTTTTAATTGACTTTCTAAGCGGTTAAAAATATATGTATTATTTATTTATTTAGTTAGAAACACCTTTTTACGCACTTAAAAAATCAATTCAAGCATATTTTCGGTATCTTAATGTTTTAATTTTTTT

mRNA sequence

TTAAAGAAAAAGAGGCTATAAAAACAGAGTAATAAGAGAATCAAAGGGCAACTCGCTTTATCTATTTTGTCTTTTTGAAAAAAGCTCTCTTGAAGAAGATGACATCTTCAATCTCAACCACCCACTTCATCCTCCTCTTCCTCTTCCTCTCTTCTTCCATAGCTTATGCACAGGAAGATGAAGCCTTCTTCATTAAAAAATCCATGGACAGAAAGCTTCTAGGCCTTGAAACAGAGCAGCTAAGCCATTTAAGGCTATATTGGCACGACGTTTTAAGTGGCGACAACCCAACTTCAATTGAGATCATACCTCCAATTTCAAACAAATTCCAGTCAGGATTTGGGTACATTCGAATGATCGACAATGCGCTGACAGAGGAACAAAATCGAAGCTCCAAGTTATTGGGAAGAGCTCAAGGATTCTATGCATCAGCTTCACAAGACAAAGTTGCGTTGTTAATGGCTATGAATTTTGTGTTTACGAGTGGAAAATACAACGGAAGCACCATTTCCATGTTTGGAAGGAATCCATGGATGGAGAATCTTAGAGAGTTGTCTGTGATTGGAGGAAGTGGGTTGTTTAGGTTTGCAAGAGGCTATGCTAAACTTCATACCGTTGAGCTTGATATTGCTAAAGGGAATGCTGTTGTTGAATACAACATTTACCTGTTCCATTACGCTGATTCCATTGCTTCATTTTAAGTTTTGTTTTAATTGACTTTCTAAGCGGTTAAAAATATATGTATTATTTATTTATTTAGTTAGAAACACCTTTTTACGCACTTAAAAAATCAATTCAAGCATATTTTCGGTATCTTAATGTTTTAATTTTTTT

Coding sequence (CDS)

ATGACATCTTCAATCTCAACCACCCACTTCATCCTCCTCTTCCTCTTCCTCTCTTCTTCCATAGCTTATGCACAGGAAGATGAAGCCTTCTTCATTAAAAAATCCATGGACAGAAAGCTTCTAGGCCTTGAAACAGAGCAGCTAAGCCATTTAAGGCTATATTGGCACGACGTTTTAAGTGGCGACAACCCAACTTCAATTGAGATCATACCTCCAATTTCAAACAAATTCCAGTCAGGATTTGGGTACATTCGAATGATCGACAATGCGCTGACAGAGGAACAAAATCGAAGCTCCAAGTTATTGGGAAGAGCTCAAGGATTCTATGCATCAGCTTCACAAGACAAAGTTGCGTTGTTAATGGCTATGAATTTTGTGTTTACGAGTGGAAAATACAACGGAAGCACCATTTCCATGTTTGGAAGGAATCCATGGATGGAGAATCTTAGAGAGTTGTCTGTGATTGGAGGAAGTGGGTTGTTTAGGTTTGCAAGAGGCTATGCTAAACTTCATACCGTTGAGCTTGATATTGCTAAAGGGAATGCTGTTGTTGAATACAACATTTACCTGTTCCATTACGCTGATTCCATTGCTTCATTTTAA

Protein sequence

MTSSISTTHFILLFLFLSSSIAYAQEDEAFFIKKSMDRKLLGLETEQLSHLRLYWHDVLSGDNPTSIEIIPPISNKFQSGFGYIRMIDNALTEEQNRSSKLLGRAQGFYASASQDKVALLMAMNFVFTSGKYNGSTISMFGRNPWMENLRELSVIGGSGLFRFARGYAKLHTVELDIAKGNAVVEYNIYLFHYADSIASF

Homology

[Close]

BLAST of Clc06G01130 vs. NCBI nr
Match: XP_038875321.1 (dirigent protein 20-like [Benincasa hispida])

HSP 1 Score: 365.2 bits (936), Expect = 3.7e-97
Identity = 184/200 (92.00%), Postives = 192/200 (96.00%), Query Frame = 0


Query: 1   MTSSISTTHFILLFLFLSSSIAYAQEDEAFFIKKSMDRKLLGLETEQLSHLRLYWHDVLS 60
           MTSSIS THFI  FLF    IAYAQ+DE+FFIKKSMDRKLLGLETEQLSHLRLYWHDVLS
Sbjct: 1   MTSSISATHFIFFFLF----IAYAQQDESFFIKKSMDRKLLGLETEQLSHLRLYWHDVLS 60

Query: 61  GDNPTSIEIIPPISNKFQSGFGYIRMIDNALTEEQNRSSKLLGRAQGFYASASQDKVALL 120
           GDNPTS+EIIPPISNKF SGFGYIRMIDNALTEEQ+RSSKLLGRAQGFYASASQDKVALL
Sbjct: 61  GDNPTSMEIIPPISNKFHSGFGYIRMIDNALTEEQDRSSKLLGRAQGFYASASQDKVALL 120

Query: 121 MAMNFVFTSGKYNGSTISMFGRNPWMENLRELSVIGGSGLFRFARGYAKLHTVELDIAKG 180
           MAMNFVFTSGKYNGS+IS+FGRNPWMENLRELSVIGGSGLFRFARGYA+LHTVELDIAKG
Sbjct: 121 MAMNFVFTSGKYNGSSISLFGRNPWMENLRELSVIGGSGLFRFARGYAQLHTVELDIAKG 180

Query: 181 NAVVEYNIYLFHYADSIASF 201
           NAVVEYNIYLFHYADSI+SF
Sbjct: 181 NAVVEYNIYLFHYADSISSF 196

[Close]

BLAST of Clc06G01130 vs. NCBI nr
Match: XP_008460022.1 (PREDICTED: dirigent protein 20-like [Cucumis melo] >KAA0039926.1 dirigent protein 20-like [Cucumis melo var. makuwa])

HSP 1 Score: 356.3 bits (913), Expect = 1.7e-94
Identity = 175/200 (87.50%), Postives = 191/200 (95.50%), Query Frame = 0


Query: 1   MTSSISTTHFILLFLFLSSSIAYAQEDEAFFIKKSMDRKLLGLETEQLSHLRLYWHDVLS 60
           MT SIS THF+ L L LSSSIAY+Q+DEAFF+KKSMD+KLLGLETEQLSHLRLYWHDVLS
Sbjct: 1   MTPSISATHFLFLLLILSSSIAYSQQDEAFFVKKSMDKKLLGLETEQLSHLRLYWHDVLS 60

Query: 61  GDNPTSIEIIPPISNKFQSGFGYIRMIDNALTEEQNRSSKLLGRAQGFYASASQDKVALL 120
           G+NPTSIEI+PPIS+KF SGFGYIRMIDNALTEEQ+RSSKLLGRAQG YASASQDKVALL
Sbjct: 61  GENPTSIEIVPPISDKFISGFGYIRMIDNALTEEQDRSSKLLGRAQGLYASASQDKVALL 120

Query: 121 MAMNFVFTSGKYNGSTISMFGRNPWMENLRELSVIGGSGLFRFARGYAKLHTVELDIAKG 180
           MAMNFVFTSGKYNGS+IS++GRNPW+EN+RELSVIGGSGLFRFARGYA LHTVE+DIAKG
Sbjct: 121 MAMNFVFTSGKYNGSSISLYGRNPWLENVRELSVIGGSGLFRFARGYATLHTVEIDIAKG 180

Query: 181 NAVVEYNIYLFHYADSIASF 201
           NAVVEYNIY+FHYADSIA F
Sbjct: 181 NAVVEYNIYIFHYADSIALF 200

[Close]

BLAST of Clc06G01130 vs. NCBI nr
Match: XP_004140684.2 (dirigent protein 7 [Cucumis sativus] >KGN46324.1 hypothetical protein Csa_005595 [Cucumis sativus])

HSP 1 Score: 353.6 bits (906), Expect = 1.1e-93
Identity = 177/202 (87.62%), Postives = 192/202 (95.05%), Query Frame = 0


Query: 1   MTSSISTTHFILLFLF--LSSSIAYAQEDEAFFIKKSMDRKLLGLETEQLSHLRLYWHDV 60
           MT+SIS  HF+ LFLF  LSSSIAY Q+DEAFFI KSMD+KLLGLETEQLSHLR+YWHDV
Sbjct: 23  MTASISANHFLFLFLFLILSSSIAYTQQDEAFFINKSMDKKLLGLETEQLSHLRVYWHDV 82

Query: 61  LSGDNPTSIEIIPPISNKFQSGFGYIRMIDNALTEEQNRSSKLLGRAQGFYASASQDKVA 120
           LSG+NPTSIEI+PPIS+KF SGFGYIRMIDNALTEEQ+RSSKLLGRAQG YASASQDKVA
Sbjct: 83  LSGNNPTSIEIVPPISDKFISGFGYIRMIDNALTEEQDRSSKLLGRAQGLYASASQDKVA 142

Query: 121 LLMAMNFVFTSGKYNGSTISMFGRNPWMENLRELSVIGGSGLFRFARGYAKLHTVELDIA 180
           LLMAMNFVFTSGKYNGS+IS++GRNPWME++RELSVIGGSGLFRFARGYAKLHTVELDIA
Sbjct: 143 LLMAMNFVFTSGKYNGSSISLYGRNPWMEDVRELSVIGGSGLFRFARGYAKLHTVELDIA 202

Query: 181 KGNAVVEYNIYLFHYADSIASF 201
           KGNAVVEYNIY+FHYADSIA F
Sbjct: 203 KGNAVVEYNIYIFHYADSIALF 224

[Close]

BLAST of Clc06G01130 vs. NCBI nr
Match: XP_038901684.1 (dirigent protein 20-like [Benincasa hispida])

HSP 1 Score: 248.1 bits (632), Expect = 6.6e-62
Identity = 118/191 (61.78%), Postives = 151/191 (79.06%), Query Frame = 0


Query: 3   SSISTTHFILLFLFLSSSIAYAQEDEAFFIKKSMDRKLLGLETEQLSHLRLYWHDVLSGD 62
           S +S THF+ L   LSS+IA+A  ++ +   +++DRKLLGL  E+LSHLRLYWHDV SG 
Sbjct: 54  SPLSATHFLFLSFLLSSAIAFAIGEDEYSFGRTLDRKLLGLRKEKLSHLRLYWHDVQSGK 113

Query: 63  NPTSIEIIPPISNKFQSGFGYIRMIDNALTEEQNRSSKLLGRAQGFYASASQDKVALLMA 122
           NPTS++I+PP+SN  ++GFG ++MIDN LT   +  SKL GRAQG YA+ASQDK  LLMA
Sbjct: 114 NPTSVQIVPPVSNTSRTGFGAVQMIDNPLTATSDPKSKLWGRAQGLYAAASQDKSGLLMA 173

Query: 123 MNFVFTSGKYNGSTISMFGRNPWMENLRELSVIGGSGLFRFARGYAKLHTVELDIAKGNA 182
           MNF F SGKYNGS+I++FGRNP+ME +RE+ VIGGSGLFRFARGYA+  T ++D   G+A
Sbjct: 174 MNFAFVSGKYNGSSITIFGRNPFMEKVREMPVIGGSGLFRFARGYAEARTSKIDFYTGDA 233

Query: 183 VVEYNIYLFHY 194
           V+EYNIY+ HY
Sbjct: 234 VIEYNIYVLHY 244

[Close]

BLAST of Clc06G01130 vs. NCBI nr
Match: XP_038901685.1 (dirigent protein 20-like [Benincasa hispida])

HSP 1 Score: 246.9 bits (629), Expect = 1.5e-61
Identity = 117/191 (61.26%), Postives = 151/191 (79.06%), Query Frame = 0


Query: 3   SSISTTHFILLFLFLSSSIAYAQEDEAFFIKKSMDRKLLGLETEQLSHLRLYWHDVLSGD 62
           S +S THF+ L   LSS++A+A  ++ +   +++DRKLLGL  E+LSHLRLYWHDV SG 
Sbjct: 28  SPLSATHFLFLSFLLSSAMAFAIGEDEYSFGRTLDRKLLGLRKEKLSHLRLYWHDVQSGK 87

Query: 63  NPTSIEIIPPISNKFQSGFGYIRMIDNALTEEQNRSSKLLGRAQGFYASASQDKVALLMA 122
           NPTS++I+PP+SN  ++GFG ++MIDN LT   +  SKL GRAQG YA+ASQDK  LLMA
Sbjct: 88  NPTSVQIVPPVSNTSRTGFGAVQMIDNPLTATSDPKSKLWGRAQGLYAAASQDKSGLLMA 147

Query: 123 MNFVFTSGKYNGSTISMFGRNPWMENLRELSVIGGSGLFRFARGYAKLHTVELDIAKGNA 182
           MNF F SGKYNGS+I++FGRNP+ME +RE+ VIGGSGLFRFARGYA+  T ++D   G+A
Sbjct: 148 MNFAFVSGKYNGSSITIFGRNPFMEKVREMPVIGGSGLFRFARGYAEARTSKIDFYTGDA 207

Query: 183 VVEYNIYLFHY 194
           V+EYNIY+ HY
Sbjct: 208 VIEYNIYVLHY 218

[Close]

BLAST of Clc06G01130 vs. ExPASy Swiss-Prot
Match: Q9C891 (Dirigent protein 20 OS=Arabidopsis thaliana OX=3702 GN=DIR20 PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.1e-46
Identity = 98/183 (53.55%), Postives = 133/183 (72.68%), Query Frame = 0


Query: 12  LLFLFLSSSIAYAQEDEAFFIKKSMDRKLLGL-ETEQLSHLRLYWHDVLSGDNPTSIEII 71
           +LFL + SS   A + E F   ++MDRKLLGL + E+L+H ++YWHD+LSG NPTSI I 
Sbjct: 12  ILFLAVVSS---AGDGEDF--ARTMDRKLLGLHKKEKLTHFKVYWHDILSGPNPTSIMIQ 71

Query: 72  PPISNKFQSGFGYIRMIDNALTEEQNRSSKLLGRAQGFYASASQDKVALLMAMNFVFTSG 131
           PP++N   S FG I MIDNALT +   +S +LG+AQGFYA A+Q ++  LMAMNF F +G
Sbjct: 72  PPVTN--SSYFGAISMIDNALTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAFKTG 131

Query: 132 KYNGSTISMFGRNPWMENLRELSVIGGSGLFRFARGYAKLHTVELDIAKGNAVVEYNIYL 191
           KYNGSTI++ GRN  +  +RE+ ++GGSGLFRFARGY +  T  +++  G+A VEY+ Y+
Sbjct: 132 KYNGSTITILGRNTALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYSCYV 187

Query: 192 FHY 194
            HY
Sbjct: 192 LHY 187

[Close]

BLAST of Clc06G01130 vs. ExPASy Swiss-Prot
Match: Q9C523 (Dirigent protein 19 OS=Arabidopsis thaliana OX=3702 GN=DIR19 PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.9e-43
Identity = 83/161 (51.55%), Postives = 115/161 (71.43%), Query Frame = 0


Query: 34  KSMDRKLLGLETEQLSHLRLYWHDVLSGDNPTSIEII-PPISNKFQSGFGYIRMIDNALT 93
           ++++   L  + E+L+H R+YWHD+++G + +S+ I+ PP      +GFG +RMIDN LT
Sbjct: 25  ETLESNFLHHKKEKLTHFRVYWHDIVTGQDSSSVSIMNPPKKYTGATGFGLMRMIDNPLT 84

Query: 94  EEQNRSSKLLGRAQGFYASASQDKVALLMAMNFVFTSGKYNGSTISMFGRNPWMENLREL 153
                SSK++GRAQGFYA  S++++ LLMAMNF    GKYNGSTI++ GRN   + +RE+
Sbjct: 85  LTPKLSSKMVGRAQGFYAGTSKEEIGLLMAMNFAILDGKYNGSTITVLGRNSVFDKVREM 144

Query: 154 SVIGGSGLFRFARGYAKLHTVELDIAKGNAVVEYNIYLFHY 194
            VIGGSGLFRFARGY +  T E ++  GNA+VEYN YL HY
Sbjct: 145 PVIGGSGLFRFARGYVQASTHEFNLKTGNAIVEYNCYLLHY 185

[Close]

BLAST of Clc06G01130 vs. ExPASy Swiss-Prot
Match: Q9LID5 (Dirigent protein 7 OS=Arabidopsis thaliana OX=3702 GN=DIR7 PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.9e-43
Identity = 90/183 (49.18%), Postives = 125/183 (68.31%), Query Frame = 0


Query: 11  ILLFLFLSSSIAYAQEDEAFFIKKSMDRKLLGLETEQLSHLRLYWHDVLSGDNPTSIEII 70
           I+  + L +++  A++ E F   K++D+K  GL  E+L+H R+YWHD+LSG NP+S+ I 
Sbjct: 8   IVTQILLIAAVVSARKGENF--AKTIDKKHFGLRKEKLTHFRVYWHDILSGSNPSSVVIN 67

Query: 71  PPISNKFQSGFGYIRMIDNALTEEQNRSSKLLGRAQGFYASASQDKVALLMAMNFVFTSG 130
           PPISN   S FG + +IDN LT E   +S L+G+AQG YA+  Q   + LM MNF F +G
Sbjct: 68  PPISN--SSFFGSVTVIDNRLTTEVAVNSTLVGQAQGIYAATGQRDASALMVMNFAFKTG 127

Query: 131 KYNGSTISMFGRNPWMENLRELSVIGGSGLFRFARGYAKLHTVELDIAKGNAVVEYNIYL 190
           KYNGS+I++ GRN  +  +RE+ VIGGSGLFRFARGY +  T+  D   G+A VEY+ Y+
Sbjct: 128 KYNGSSIAILGRNAVLTKVREMPVIGGSGLFRFARGYVEARTMWFDQKSGDATVEYSCYV 186

Query: 191 FHY 194
            HY
Sbjct: 188 LHY 186

[Close]

BLAST of Clc06G01130 vs. ExPASy Swiss-Prot
Match: Q9FI66 (Dirigent protein 3 OS=Arabidopsis thaliana OX=3702 GN=DIR3 PE=3 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 8.7e-41
Identity = 87/181 (48.07%), Postives = 124/181 (68.51%), Query Frame = 0


Query: 15  LFLSSSIAYAQEDEAFFIKKSMDRKLLGL-ETEQLSHLRLYWHDVLSGDNPTSIEIIPPI 74
           L L+++    +  E F   ++++RK LGL + E+L+HLR+YWHD+++G NP+SI I  P+
Sbjct: 13  LLLTATALAGKNGEDF--ARTINRKHLGLGKKEKLTHLRVYWHDIVTGRNPSSIRIQGPV 72

Query: 75  SNKFQSG-FGYIRMIDNALTEEQNRSSKLLGRAQGFYASASQDKVALLMAMNFVFTSGKY 134
           +    S  FG I MIDNALT +   +S ++G+AQG Y  A+Q ++ LLMAMN  F +GKY
Sbjct: 73  AKYSSSSYFGSITMIDNALTLDVPINSTVVGQAQGMYVGAAQKEIGLLMAMNLAFKTGKY 132

Query: 135 NGSTISMFGRNPWMENLRELSVIGGSGLFRFARGYAKLHTVELDIAKGNAVVEYNIYLFH 194
           NGSTI++ GRN  M  +RE+ V+GGSG+FRFARGY +  T   D+  G+A VE N Y+ H
Sbjct: 133 NGSTITILGRNTVMSKVREMPVVGGSGMFRFARGYVEARTKLFDMKTGDATVESNCYILH 191

[Close]

BLAST of Clc06G01130 vs. ExPASy Swiss-Prot
Match: Q9SS03 (Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.3e-39
Identity = 82/183 (44.81%), Postives = 125/183 (68.31%), Query Frame = 0


Query: 11  ILLFLFLSSSIAYAQEDEAFFIKKSMDRKLLGLETEQLSHLRLYWHDVLSGDNPTSIEII 70
           +LL LFL+  +A A   E+     ++     G + ++L+HL  Y+HD++SGD PTS+++ 
Sbjct: 8   LLLPLFLALILA-ATITESKSFSTTVKAPYPGHKPDKLTHLHFYFHDIVSGDKPTSVQVA 67

Query: 71  -PPISNKFQSGFGYIRMIDNALTEEQNRSSKLLGRAQGFYASASQDKVALLMAMNFVFTS 130
             P +N   +GFG + ++D+ LT     +S+ +GRAQG YASA Q+K+ LLMA N VFT 
Sbjct: 68  NGPTTNSSATGFGLVAVVDDKLTVGPEITSEEVGRAQGMYASADQNKLGLLMAFNLVFTK 127

Query: 131 GKYNGSTISMFGRNPWMENLRELSVIGGSGLFRFARGYAKLHTVELDIAKGNAVVEYNIY 190
           GK++ ST++M+GRNP +  +RE+ +IGG+G FRF RGYA   T+  +I  G+AVVEYN+Y
Sbjct: 128 GKFSDSTVAMYGRNPVLSKVREMPIIGGTGAFRFGRGYALAKTLVFNITSGDAVVEYNVY 187

Query: 191 LFH 193
           ++H
Sbjct: 188 IWH 189

[Close]

BLAST of Clc06G01130 vs. ExPASy TrEMBL
Match: A0A5A7TCV4 (Dirigent protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002060 PE=3 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 8.4e-95
Identity = 175/200 (87.50%), Postives = 191/200 (95.50%), Query Frame = 0


Query: 1   MTSSISTTHFILLFLFLSSSIAYAQEDEAFFIKKSMDRKLLGLETEQLSHLRLYWHDVLS 60
           MT SIS THF+ L L LSSSIAY+Q+DEAFF+KKSMD+KLLGLETEQLSHLRLYWHDVLS
Sbjct: 1   MTPSISATHFLFLLLILSSSIAYSQQDEAFFVKKSMDKKLLGLETEQLSHLRLYWHDVLS 60

Query: 61  GDNPTSIEIIPPISNKFQSGFGYIRMIDNALTEEQNRSSKLLGRAQGFYASASQDKVALL 120
           G+NPTSIEI+PPIS+KF SGFGYIRMIDNALTEEQ+RSSKLLGRAQG YASASQDKVALL
Sbjct: 61  GENPTSIEIVPPISDKFISGFGYIRMIDNALTEEQDRSSKLLGRAQGLYASASQDKVALL 120

Query: 121 MAMNFVFTSGKYNGSTISMFGRNPWMENLRELSVIGGSGLFRFARGYAKLHTVELDIAKG 180
           MAMNFVFTSGKYNGS+IS++GRNPW+EN+RELSVIGGSGLFRFARGYA LHTVE+DIAKG
Sbjct: 121 MAMNFVFTSGKYNGSSISLYGRNPWLENVRELSVIGGSGLFRFARGYATLHTVEIDIAKG 180

Query: 181 NAVVEYNIYLFHYADSIASF 201
           NAVVEYNIY+FHYADSIA F
Sbjct: 181 NAVVEYNIYIFHYADSIALF 200

[Close]

BLAST of Clc06G01130 vs. ExPASy TrEMBL
Match: A0A1S3CC10 (Dirigent protein OS=Cucumis melo OX=3656 GN=LOC103498961 PE=3 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 8.4e-95
Identity = 175/200 (87.50%), Postives = 191/200 (95.50%), Query Frame = 0


Query: 1   MTSSISTTHFILLFLFLSSSIAYAQEDEAFFIKKSMDRKLLGLETEQLSHLRLYWHDVLS 60
           MT SIS THF+ L L LSSSIAY+Q+DEAFF+KKSMD+KLLGLETEQLSHLRLYWHDVLS
Sbjct: 1   MTPSISATHFLFLLLILSSSIAYSQQDEAFFVKKSMDKKLLGLETEQLSHLRLYWHDVLS 60

Query: 61  GDNPTSIEIIPPISNKFQSGFGYIRMIDNALTEEQNRSSKLLGRAQGFYASASQDKVALL 120
           G+NPTSIEI+PPIS+KF SGFGYIRMIDNALTEEQ+RSSKLLGRAQG YASASQDKVALL
Sbjct: 61  GENPTSIEIVPPISDKFISGFGYIRMIDNALTEEQDRSSKLLGRAQGLYASASQDKVALL 120

Query: 121 MAMNFVFTSGKYNGSTISMFGRNPWMENLRELSVIGGSGLFRFARGYAKLHTVELDIAKG 180
           MAMNFVFTSGKYNGS+IS++GRNPW+EN+RELSVIGGSGLFRFARGYA LHTVE+DIAKG
Sbjct: 121 MAMNFVFTSGKYNGSSISLYGRNPWLENVRELSVIGGSGLFRFARGYATLHTVEIDIAKG 180

Query: 181 NAVVEYNIYLFHYADSIASF 201
           NAVVEYNIY+FHYADSIA F
Sbjct: 181 NAVVEYNIYIFHYADSIALF 200

[Close]

BLAST of Clc06G01130 vs. ExPASy TrEMBL
Match: A0A0A0KBU8 (Dirigent protein OS=Cucumis sativus OX=3659 GN=Csa_6G084580 PE=3 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.4e-94
Identity = 177/202 (87.62%), Postives = 192/202 (95.05%), Query Frame = 0


Query: 1   MTSSISTTHFILLFLF--LSSSIAYAQEDEAFFIKKSMDRKLLGLETEQLSHLRLYWHDV 60
           MT+SIS  HF+ LFLF  LSSSIAY Q+DEAFFI KSMD+KLLGLETEQLSHLR+YWHDV
Sbjct: 23  MTASISANHFLFLFLFLILSSSIAYTQQDEAFFINKSMDKKLLGLETEQLSHLRVYWHDV 82

Query: 61  LSGDNPTSIEIIPPISNKFQSGFGYIRMIDNALTEEQNRSSKLLGRAQGFYASASQDKVA 120
           LSG+NPTSIEI+PPIS+KF SGFGYIRMIDNALTEEQ+RSSKLLGRAQG YASASQDKVA
Sbjct: 83  LSGNNPTSIEIVPPISDKFISGFGYIRMIDNALTEEQDRSSKLLGRAQGLYASASQDKVA 142

Query: 121 LLMAMNFVFTSGKYNGSTISMFGRNPWMENLRELSVIGGSGLFRFARGYAKLHTVELDIA 180
           LLMAMNFVFTSGKYNGS+IS++GRNPWME++RELSVIGGSGLFRFARGYAKLHTVELDIA
Sbjct: 143 LLMAMNFVFTSGKYNGSSISLYGRNPWMEDVRELSVIGGSGLFRFARGYAKLHTVELDIA 202

Query: 181 KGNAVVEYNIYLFHYADSIASF 201
           KGNAVVEYNIY+FHYADSIA F
Sbjct: 203 KGNAVVEYNIYIFHYADSIALF 224

[Close]

BLAST of Clc06G01130 vs. ExPASy TrEMBL
Match: A0A6J1DK88 (Dirigent protein OS=Momordica charantia OX=3673 GN=LOC111021252 PE=3 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.8e-60
Identity = 117/192 (60.94%), Postives = 153/192 (79.69%), Query Frame = 0


Query: 3   SSISTTHFILLFLFLSSSIAYA-QEDEAFFIKKSMDRKLLGLETEQLSHLRLYWHDVLSG 62
           SSIS  HF+ L LF+ S++A+A  EDE  F+ +S+DRKLLGL  ++LSH RLYWHD L+G
Sbjct: 5   SSISAVHFLTLSLFVFSAVAFATPEDEDSFV-RSVDRKLLGLRKQKLSHFRLYWHDTLTG 64

Query: 63  DNPTSIEIIPPISNKFQSGFGYIRMIDNALTEEQNRSSKLLGRAQGFYASASQDKVALLM 122
            NP+S+ I+PP+SN   +GFG+++MIDNALT   +  SKL GRA+GFYA+ASQ+   LLM
Sbjct: 65  KNPSSVRIVPPVSNSSTTGFGFVQMIDNALTAGPDPRSKLWGRAEGFYAAASQENPGLLM 124

Query: 123 AMNFVFTSGKYNGSTISMFGRNPWMENLRELSVIGGSGLFRFARGYAKLHTVELDIAKGN 182
           AMNF F SGKYNGS++++FGRNP+ME +RE+ VIGGSGLFRFARGYA+  T ++D   G+
Sbjct: 125 AMNFAFFSGKYNGSSLTIFGRNPFMEKVREMPVIGGSGLFRFARGYAEARTSKIDFKTGD 184

Query: 183 AVVEYNIYLFHY 194
           AV+EYNIY+ HY
Sbjct: 185 AVIEYNIYVLHY 195

[Close]

BLAST of Clc06G01130 vs. ExPASy TrEMBL
Match: A0A5A7T9F1 (Dirigent protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G00200 PE=3 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 6.7e-60
Identity = 122/192 (63.54%), Postives = 147/192 (76.56%), Query Frame = 0


Query: 3   SSISTTHFILLFLFLSSSIAYA-QEDEAFFIKKSMDRKLLGLETEQLSHLRLYWHDVLSG 62
           S IS THF+ L   LSS +A A  EDE  F  ++++RK LGL  E+LSH RLYWHDVLSG
Sbjct: 5   SPISATHFLFLSFLLSSVVALAIAEDEPSF-ARTVERKRLGLRKEKLSHFRLYWHDVLSG 64

Query: 63  DNPTSIEIIPPISNKFQSGFGYIRMIDNALTEEQNRSSKLLGRAQGFYASASQDKVALLM 122
             PTSI+I+PP+SN   +GFG + MIDN LTE  +  SKL GRAQG YASASQDK  LLM
Sbjct: 65  KYPTSIQIVPPVSNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDKFGLLM 124

Query: 123 AMNFVFTSGKYNGSTISMFGRNPWMENLRELSVIGGSGLFRFARGYAKLHTVELDIAKGN 182
           AMNF F SGKYNGS++++FGRNP+ME +RE+ VIGGSGLFRFARGYA+  T ++D   G+
Sbjct: 125 AMNFAFVSGKYNGSSLTIFGRNPFMEKVREMPVIGGSGLFRFARGYAEASTKKVDFKTGD 184

Query: 183 AVVEYNIYLFHY 194
           AVVEYNIY+ HY
Sbjct: 185 AVVEYNIYVLHY 195

[Close]

BLAST of Clc06G01130 vs. TAIR 10
Match: AT1G55210.1 (Disease resistance-responsive (dirigent-like protein) family protein )

HSP 1 Score: 188.0 bits (476), Expect = 7.6e-48
Identity = 98/183 (53.55%), Postives = 133/183 (72.68%), Query Frame = 0


Query: 12  LLFLFLSSSIAYAQEDEAFFIKKSMDRKLLGL-ETEQLSHLRLYWHDVLSGDNPTSIEII 71
           +LFL + SS   A + E F   ++MDRKLLGL + E+L+H ++YWHD+LSG NPTSI I 
Sbjct: 12  ILFLAVVSS---AGDGEDF--ARTMDRKLLGLHKKEKLTHFKVYWHDILSGPNPTSIMIQ 71

Query: 72  PPISNKFQSGFGYIRMIDNALTEEQNRSSKLLGRAQGFYASASQDKVALLMAMNFVFTSG 131
           PP++N   S FG I MIDNALT +   +S +LG+AQGFYA A+Q ++  LMAMNF F +G
Sbjct: 72  PPVTN--SSYFGAISMIDNALTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAFKTG 131

Query: 132 KYNGSTISMFGRNPWMENLRELSVIGGSGLFRFARGYAKLHTVELDIAKGNAVVEYNIYL 191
           KYNGSTI++ GRN  +  +RE+ ++GGSGLFRFARGY +  T  +++  G+A VEY+ Y+
Sbjct: 132 KYNGSTITILGRNTALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYSCYV 187

Query: 192 FHY 194
            HY
Sbjct: 192 LHY 187

[Close]

BLAST of Clc06G01130 vs. TAIR 10
Match: AT1G55210.2 (Disease resistance-responsive (dirigent-like protein) family protein )

HSP 1 Score: 188.0 bits (476), Expect = 7.6e-48
Identity = 98/183 (53.55%), Postives = 133/183 (72.68%), Query Frame = 0


Query: 12  LLFLFLSSSIAYAQEDEAFFIKKSMDRKLLGL-ETEQLSHLRLYWHDVLSGDNPTSIEII 71
           +LFL + SS   A + E F   ++MDRKLLGL + E+L+H ++YWHD+LSG NPTSI I 
Sbjct: 12  ILFLAVVSS---AGDGEDF--ARTMDRKLLGLHKKEKLTHFKVYWHDILSGPNPTSIMIQ 71

Query: 72  PPISNKFQSGFGYIRMIDNALTEEQNRSSKLLGRAQGFYASASQDKVALLMAMNFVFTSG 131
           PP++N   S FG I MIDNALT +   +S +LG+AQGFYA A+Q ++  LMAMNF F +G
Sbjct: 72  PPVTN--SSYFGAISMIDNALTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAFKTG 131

Query: 132 KYNGSTISMFGRNPWMENLRELSVIGGSGLFRFARGYAKLHTVELDIAKGNAVVEYNIYL 191
           KYNGSTI++ GRN  +  +RE+ ++GGSGLFRFARGY +  T  +++  G+A VEY+ Y+
Sbjct: 132 KYNGSTITILGRNTALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYSCYV 187

Query: 192 FHY 194
            HY
Sbjct: 192 LHY 187

[Close]

BLAST of Clc06G01130 vs. TAIR 10
Match: AT1G58170.1 (Disease resistance-responsive (dirigent-like protein) family protein )

HSP 1 Score: 177.2 bits (448), Expect = 1.3e-44
Identity = 83/161 (51.55%), Postives = 115/161 (71.43%), Query Frame = 0


Query: 34  KSMDRKLLGLETEQLSHLRLYWHDVLSGDNPTSIEII-PPISNKFQSGFGYIRMIDNALT 93
           ++++   L  + E+L+H R+YWHD+++G + +S+ I+ PP      +GFG +RMIDN LT
Sbjct: 25  ETLESNFLHHKKEKLTHFRVYWHDIVTGQDSSSVSIMNPPKKYTGATGFGLMRMIDNPLT 84

Query: 94  EEQNRSSKLLGRAQGFYASASQDKVALLMAMNFVFTSGKYNGSTISMFGRNPWMENLREL 153
                SSK++GRAQGFYA  S++++ LLMAMNF    GKYNGSTI++ GRN   + +RE+
Sbjct: 85  LTPKLSSKMVGRAQGFYAGTSKEEIGLLMAMNFAILDGKYNGSTITVLGRNSVFDKVREM 144

Query: 154 SVIGGSGLFRFARGYAKLHTVELDIAKGNAVVEYNIYLFHY 194
            VIGGSGLFRFARGY +  T E ++  GNA+VEYN YL HY
Sbjct: 145 PVIGGSGLFRFARGYVQASTHEFNLKTGNAIVEYNCYLLHY 185

[Close]

BLAST of Clc06G01130 vs. TAIR 10
Match: AT3G13650.1 (Disease resistance-responsive (dirigent-like protein) family protein )

HSP 1 Score: 177.2 bits (448), Expect = 1.3e-44
Identity = 90/183 (49.18%), Postives = 125/183 (68.31%), Query Frame = 0


Query: 11  ILLFLFLSSSIAYAQEDEAFFIKKSMDRKLLGLETEQLSHLRLYWHDVLSGDNPTSIEII 70
           I+  + L +++  A++ E F   K++D+K  GL  E+L+H R+YWHD+LSG NP+S+ I 
Sbjct: 8   IVTQILLIAAVVSARKGENF--AKTIDKKHFGLRKEKLTHFRVYWHDILSGSNPSSVVIN 67

Query: 71  PPISNKFQSGFGYIRMIDNALTEEQNRSSKLLGRAQGFYASASQDKVALLMAMNFVFTSG 130
           PPISN   S FG + +IDN LT E   +S L+G+AQG YA+  Q   + LM MNF F +G
Sbjct: 68  PPISN--SSFFGSVTVIDNRLTTEVAVNSTLVGQAQGIYAATGQRDASALMVMNFAFKTG 127

Query: 131 KYNGSTISMFGRNPWMENLRELSVIGGSGLFRFARGYAKLHTVELDIAKGNAVVEYNIYL 190
           KYNGS+I++ GRN  +  +RE+ VIGGSGLFRFARGY +  T+  D   G+A VEY+ Y+
Sbjct: 128 KYNGSSIAILGRNAVLTKVREMPVIGGSGLFRFARGYVEARTMWFDQKSGDATVEYSCYV 186

Query: 191 FHY 194
            HY
Sbjct: 188 LHY 186

[Close]

BLAST of Clc06G01130 vs. TAIR 10
Match: AT5G49040.1 (Disease resistance-responsive (dirigent-like protein) family protein )

HSP 1 Score: 168.3 bits (425), Expect = 6.2e-42
Identity = 87/181 (48.07%), Postives = 124/181 (68.51%), Query Frame = 0


Query: 15  LFLSSSIAYAQEDEAFFIKKSMDRKLLGL-ETEQLSHLRLYWHDVLSGDNPTSIEIIPPI 74
           L L+++    +  E F   ++++RK LGL + E+L+HLR+YWHD+++G NP+SI I  P+
Sbjct: 13  LLLTATALAGKNGEDF--ARTINRKHLGLGKKEKLTHLRVYWHDIVTGRNPSSIRIQGPV 72

Query: 75  SNKFQSG-FGYIRMIDNALTEEQNRSSKLLGRAQGFYASASQDKVALLMAMNFVFTSGKY 134
           +    S  FG I MIDNALT +   +S ++G+AQG Y  A+Q ++ LLMAMN  F +GKY
Sbjct: 73  AKYSSSSYFGSITMIDNALTLDVPINSTVVGQAQGMYVGAAQKEIGLLMAMNLAFKTGKY 132

Query: 135 NGSTISMFGRNPWMENLRELSVIGGSGLFRFARGYAKLHTVELDIAKGNAVVEYNIYLFH 194
           NGSTI++ GRN  M  +RE+ V+GGSG+FRFARGY +  T   D+  G+A VE N Y+ H
Sbjct: 133 NGSTITILGRNTVMSKVREMPVVGGSGMFRFARGYVEARTKLFDMKTGDATVESNCYILH 191

The following BLAST results are available for this feature:

BLAST of Clc06G01130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875321.1	3.7e-97	92.00	dirigent protein 20-like [Benincasa hispida]	[more]
XP_008460022.1	1.7e-94	87.50	PREDICTED: dirigent protein 20-like [Cucumis melo] >KAA0039926.1 dirigent protei...	[more]
XP_004140684.2	1.1e-93	87.62	dirigent protein 7 [Cucumis sativus] >KGN46324.1 hypothetical protein Csa_005595...	[more]
XP_038901684.1	6.6e-62	61.78	dirigent protein 20-like [Benincasa hispida]	[more]
XP_038901685.1	1.5e-61	61.26	dirigent protein 20-like [Benincasa hispida]	[more]

BLAST of Clc06G01130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C891	1.1e-46	53.55	Dirigent protein 20 OS=Arabidopsis thaliana OX=3702 GN=DIR20 PE=2 SV=1	[more]
Q9C523	1.9e-43	51.55	Dirigent protein 19 OS=Arabidopsis thaliana OX=3702 GN=DIR19 PE=2 SV=1	[more]
Q9LID5	1.9e-43	49.18	Dirigent protein 7 OS=Arabidopsis thaliana OX=3702 GN=DIR7 PE=2 SV=1	[more]
Q9FI66	8.7e-41	48.07	Dirigent protein 3 OS=Arabidopsis thaliana OX=3702 GN=DIR3 PE=3 SV=1	[more]
Q9SS03	1.3e-39	44.81	Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1	[more]

BLAST of Clc06G01130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TCV4	8.4e-95	87.50	Dirigent protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002...	[more]
A0A1S3CC10	8.4e-95	87.50	Dirigent protein OS=Cucumis melo OX=3656 GN=LOC103498961 PE=3 SV=1	[more]
A0A0A0KBU8	5.4e-94	87.62	Dirigent protein OS=Cucumis sativus OX=3659 GN=Csa_6G084580 PE=3 SV=1	[more]
A0A6J1DK88	1.8e-60	60.94	Dirigent protein OS=Momordica charantia OX=3673 GN=LOC111021252 PE=3 SV=1	[more]
A0A5A7T9F1	6.7e-60	63.54	Dirigent protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G002...	[more]

BLAST of Clc06G01130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55210.1	7.6e-48	53.55	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT1G55210.2	7.6e-48	53.55	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT1G58170.1	1.3e-44	51.55	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT3G13650.1	1.3e-44	49.18	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT5G49040.1	6.2e-42	48.07	Disease resistance-responsive (dirigent-like protein) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004265	Dirigent protein	PFAM	PF03018	Dirigent	coord: 49..190 e-value: 2.2E-52 score: 176.8
IPR044859	Allene oxide cyclase/Dirigent protein	GENE3D	2.40.480.10		coord: 38..190 e-value: 4.7E-17 score: 64.1
None	No IPR available	PANTHER	PTHR21495:SF190	DIRIGENT PROTEIN 7	coord: 11..192
None	No IPR available	PANTHER	PTHR21495	NUCLEOPORIN-RELATED	coord: 11..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G01130.1	Clc06G01130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048024	regulation of mRNA splicing, via spliceosome
cellular_component	GO:0048046	apoplast
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding